CmaCh04G024230 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G024230
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionCarboxypeptidase
LocationCma_Chr04: 16717607 .. 16719004 (-)
RNA-Seq ExpressionCmaCh04G024230
SyntenyCmaCh04G024230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCTAGAACGTTGGTTCGGGAGCTAGCTGATGAGCTAAAATTCAAGATCACAGCACTGTACGGAGCTTGGTTTCACAAGGGACAAGTGGGCAGGTGGGCGATCGAGTACGGCAATATACTGACATTTGCAACGGTTCGTGAGGCGTCCCATATGGTACCCTACGCCCAGCCCTCCAGATCTTTACATTTGTTCTCGTCTTTTGTTCGAGGGAGGGGGCTGCCCAATACCACTCGCCCTTCCATTGATGAATGAAACTAAACAATACTGAATTTCATTGTGTTTGTTTTGTTGGCCTTGATATCAATAATTCAAAGAGTGGAATGGCTGGGAAGTTTTCTATTGCACACAATCATTTCTATCAACAGTCAATATCTCCTCCATCTCCCTTTCCAATTCATCTCCCTCTCAATTTGGAAATTCTAGACGCAAAGTACCTTATAAGGTTCGATTTTCAATACAAATTACTCTCGTTGGTTAACTAAAAGACACTCTCAGTTGATATGTTGCCTTTTGAAAAAACTATAAATAAAACCATGAAAATTTATGCTCAAAATAGACAATATTTTACCATAGTAAAAATTTATTGTTCCTAATAAGTGGTATCAAAGTCATGCCCTTAATTTAGGACTATAAATAGAAAGTTATGTAGTCATAGTAATAATCTTTACTAGAGCTCTATTGGATTAACAATATGCTCCAAAGACTTATGATACTCAACTCCTTTCTCATACTGCATCTATTTACAATTTCATCTCAAGTACAATATATGCAACTATAAAAATATAAATTCACGAGTTTATCATGCAAGAACTCTACTATACATCAATATAACATAAATTAACAGGTAAAAGAACAAACAAGGTCGTATAAAAAGTTTGGAAACGAAAGCTAAATGGTTGAAAGAATAAAAGACCTAAAGTAACAAGTGTAAATTGTTCACAAAGTAAAACAAAAGATTTAAACCATGATATGTAGTTACCATTTGGAGGACTCGTTGCAGGGGTATGACTAAGTGAACTAGGTTACAAGCACTAAGAAGCAACGGGTGAAGAAACAAGGAACTGAAAGGGAGAGAGTTTTGGCACATGAACCCCGGAATTCATTTATAATTGTACAAAAAGCTTACACTAGACTACTAGTATACAATATGATTCTCGTTTATAACCAATAAACTTATGGTTGGGCTAGTTTTGCAAGAATAACTAAATCCAAAATCTTAACATCAAGAGTGTCGTCTACCTTCACTATTCCATCGGTGCCATCCACACCAATCAACTTCCCAGTGGCGCCACGCAGTGCACCACCCATTATCTTGATCTTGTCCGACTTCCTAGGAACAATAGCTTCTATGTCGCTAGAAATGGCTGTTATCGTTTCACCATTTCCACTTGA

mRNA sequence

ATGGGATCTAGAACGTTGGTTCGGGAGCTAGCTGATGAGCTAAAATTCAAGATCACAGCACTGTACGGAGCTTGGTTTCACAAGGGACAAGTGGGCAGGTGGGCGATCGAGTACGGCAATATACTGACATTTGCAACGGTTCGTGAGGCGTCCCATATGAGTGTCGTCTACCTTCACTATTCCATCGGTGCCATCCACACCAATCAACTTCCCAGTGGCGCCACGCAGTGCACCACCCATTATCTTGATCTTGTCCGACTTCCTAGGAACAATAGCTTCTATGTCGCTAGAAATGGCTGTTATCGTTTCACCATTTCCACTTGA

Coding sequence (CDS)

ATGGGATCTAGAACGTTGGTTCGGGAGCTAGCTGATGAGCTAAAATTCAAGATCACAGCACTGTACGGAGCTTGGTTTCACAAGGGACAAGTGGGCAGGTGGGCGATCGAGTACGGCAATATACTGACATTTGCAACGGTTCGTGAGGCGTCCCATATGAGTGTCGTCTACCTTCACTATTCCATCGGTGCCATCCACACCAATCAACTTCCCAGTGGCGCCACGCAGTGCACCACCCATTATCTTGATCTTGTCCGACTTCCTAGGAACAATAGCTTCTATGTCGCTAGAAATGGCTGTTATCGTTTCACCATTTCCACTTGA

Protein sequence

MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHMSVVYLHYSIGAIHTNQLPSGATQCTTHYLDLVRLPRNNSFYVARNGCYRFTIST
Homology
BLAST of CmaCh04G024230 vs. ExPASy Swiss-Prot
Match: Q9FH05 (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana OX=3702 GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-17
Identity = 49/89 (55.06%), Postives = 55/89 (61.80%), Query Frame = 0

Query: 2   GSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHMSVVYLHYS 61
           GSRTLVRELA +L FK T  YGAWFHK QVG WAIEYG +LTFATVR A+HM V Y    
Sbjct: 390 GSRTLVRELAQDLNFKTTVPYGAWFHKSQVGGWAIEYGKLLTFATVRGAAHM-VPYAQ-- 449

Query: 62  IGAIHTNQLPSGATQCTTHYLDLVRLPRN 91
                    PS A    + ++   RLP N
Sbjct: 450 ---------PSRALHLFSSFVSGRRLPNN 466

BLAST of CmaCh04G024230 vs. ExPASy Swiss-Prot
Match: Q9MAR8 (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana OX=3702 GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-16
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           +GSRTLV+ELAD+L F  T  YGAWF KGQVG W +EYGN+LTFATVR A+HM
Sbjct: 395 LGSRTLVKELADDLNFNTTVPYGAWFDKGQVGGWVVEYGNLLTFATVRGAAHM 447

BLAST of CmaCh04G024230 vs. ExPASy Swiss-Prot
Match: Q84W27 (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana OX=3702 GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0

Query: 3   SRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           SRTLVRELA++L FK T  YGAWFHK QVG W  EYGN+LTFATVR A+HM
Sbjct: 358 SRTLVRELAEDLNFKTTIPYGAWFHKEQVGGWVTEYGNLLTFATVRGAAHM 408

BLAST of CmaCh04G024230 vs. ExPASy Swiss-Prot
Match: Q9FH06 (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana OX=3702 GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-15
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASH 53
           +G+RT+V ELA++L FK T  YG WFHK QVG WAIEYGN+LTFATVR A+H
Sbjct: 385 LGTRTIVGELANDLNFKTTVPYGVWFHKRQVGGWAIEYGNLLTFATVRGAAH 436

BLAST of CmaCh04G024230 vs. ExPASy Swiss-Prot
Match: Q8VY01 (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana OX=3702 GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.1e-09
Identity = 29/51 (56.86%), Postives = 33/51 (64.71%), Query Frame = 0

Query: 2   GSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASH 53
           GSRTLV+ LA+EL  + T  Y  WF   QVG W   YGN L FATVR A+H
Sbjct: 388 GSRTLVKRLAEELGLRTTVPYRVWFAGQQVGGWTQVYGNTLAFATVRGAAH 438

BLAST of CmaCh04G024230 vs. ExPASy TrEMBL
Match: A0A6J1HG17 (Carboxypeptidase OS=Cucurbita moschata OX=3662 GN=LOC111463613 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.5e-18
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELA+ELKFKIT  YGAWFHKGQVG WAIEYGNILTFATVR ASHM
Sbjct: 388 MGSRTLVRELANELKFKITVPYGAWFHKGQVGGWAIEYGNILTFATVRGASHM 440

BLAST of CmaCh04G024230 vs. ExPASy TrEMBL
Match: W9S5E6 (Carboxypeptidase OS=Morus notabilis OX=981085 GN=L484_003526 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHMSVV---- 60
           +GSRTL+RELA ELKFKIT  YGAWFHKGQVG WA EYGN+LTFATVR ASHM       
Sbjct: 358 LGSRTLIRELAHELKFKITVPYGAWFHKGQVGGWATEYGNLLTFATVRGASHMVPFAQPS 417

Query: 61  -YLHYSIGAIHTNQLPS 73
             LH     +H  +LP+
Sbjct: 418 RALHLFSSFVHGRRLPN 434

BLAST of CmaCh04G024230 vs. ExPASy TrEMBL
Match: A0A6J1FG90 (Carboxypeptidase OS=Cucurbita moschata OX=3662 GN=LOC111445425 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELA +LKFKIT  YGAWFHKGQVG WAIEYGNILT+ATVR A+HM
Sbjct: 388 MGSRTLVRELAHDLKFKITVPYGAWFHKGQVGGWAIEYGNILTYATVRGAAHM 440

BLAST of CmaCh04G024230 vs. ExPASy TrEMBL
Match: A0A6J1FN17 (Carboxypeptidase OS=Cucurbita moschata OX=3662 GN=LOC111445425 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELA +LKFKIT  YGAWFHKGQVG WAIEYGNILT+ATVR A+HM
Sbjct: 394 MGSRTLVRELAHDLKFKITVPYGAWFHKGQVGGWAIEYGNILTYATVRGAAHM 446

BLAST of CmaCh04G024230 vs. ExPASy TrEMBL
Match: G7KEB8 (Carboxypeptidase OS=Medicago truncatula OX=3880 GN=11409958 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.9e-17
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           +GSRTL+RELAD+LKFK+T  YGAWFHKGQVG WA EYGN+LTFATVR A+HM
Sbjct: 386 LGSRTLIRELADDLKFKVTVPYGAWFHKGQVGGWATEYGNLLTFATVRGAAHM 438

BLAST of CmaCh04G024230 vs. NCBI nr
Match: XP_023554626.1 (serine carboxypeptidase-like 42 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.0 bits (258), Expect = 8.3e-19
Identity = 49/53 (92.45%), Postives = 49/53 (92.45%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELADELKFKIT  YGAWFHKGQVG WAIEYGNILTFATVR ASHM
Sbjct: 389 MGSRTLVRELADELKFKITVPYGAWFHKGQVGGWAIEYGNILTFATVRGASHM 441

BLAST of CmaCh04G024230 vs. NCBI nr
Match: XP_022963401.1 (serine carboxypeptidase-like 42 [Cucurbita moschata])

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-18
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELA+ELKFKIT  YGAWFHKGQVG WAIEYGNILTFATVR ASHM
Sbjct: 388 MGSRTLVRELANELKFKITVPYGAWFHKGQVGGWAIEYGNILTFATVRGASHM 440

BLAST of CmaCh04G024230 vs. NCBI nr
Match: KAG7032849.1 (Serine carboxypeptidase-like 42, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-18
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELA+ELKFKIT  YGAWFHKGQVG WAIEYGNILTFATVR ASHM
Sbjct: 357 MGSRTLVRELANELKFKITVPYGAWFHKGQVGGWAIEYGNILTFATVRGASHM 409

BLAST of CmaCh04G024230 vs. NCBI nr
Match: KAG6602158.1 (Serine carboxypeptidase-like 42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17
Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELA+ELKFKIT  YGAWFHKGQV  WAIEYGNILTFATVR ASHM
Sbjct: 419 MGSRTLVRELANELKFKITVPYGAWFHKGQVSGWAIEYGNILTFATVRGASHM 471

BLAST of CmaCh04G024230 vs. NCBI nr
Match: XP_022939555.1 (serine carboxypeptidase-like 42 isoform X1 [Cucurbita moschata])

HSP 1 Score: 97.8 bits (242), Expect = 5.9e-17
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           MGSRTLVRELA +LKFKIT  YGAWFHKGQVG WAIEYGNILT+ATVR A+HM
Sbjct: 394 MGSRTLVRELAHDLKFKITVPYGAWFHKGQVGGWAIEYGNILTYATVRGAAHM 446

BLAST of CmaCh04G024230 vs. TAIR 10
Match: AT5G42240.1 (serine carboxypeptidase-like 42 )

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-18
Identity = 49/89 (55.06%), Postives = 55/89 (61.80%), Query Frame = 0

Query: 2   GSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHMSVVYLHYS 61
           GSRTLVRELA +L FK T  YGAWFHK QVG WAIEYG +LTFATVR A+HM V Y    
Sbjct: 390 GSRTLVRELAQDLNFKTTVPYGAWFHKSQVGGWAIEYGKLLTFATVRGAAHM-VPYAQ-- 449

Query: 62  IGAIHTNQLPSGATQCTTHYLDLVRLPRN 91
                    PS A    + ++   RLP N
Sbjct: 450 ---------PSRALHLFSSFVSGRRLPNN 466

BLAST of CmaCh04G024230 vs. TAIR 10
Match: AT1G43780.1 (serine carboxypeptidase-like 44 )

HSP 1 Score: 87.4 bits (215), Expect = 7.5e-18
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           +GSRTLV+ELAD+L F  T  YGAWF KGQVG W +EYGN+LTFATVR A+HM
Sbjct: 395 LGSRTLVKELADDLNFNTTVPYGAWFDKGQVGGWVVEYGNLLTFATVRGAAHM 447

BLAST of CmaCh04G024230 vs. TAIR 10
Match: AT2G12480.1 (serine carboxypeptidase-like 43 )

HSP 1 Score: 84.0 bits (206), Expect = 8.2e-17
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0

Query: 3   SRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASHM 54
           SRTLVRELA++L FK T  YGAWFHK QVG W  EYGN+LTFATVR A+HM
Sbjct: 358 SRTLVRELAEDLNFKTTIPYGAWFHKEQVGGWVTEYGNLLTFATVRGAAHM 408

BLAST of CmaCh04G024230 vs. TAIR 10
Match: AT5G42230.1 (serine carboxypeptidase-like 41 )

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-16
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 1   MGSRTLVRELADELKFKITALYGAWFHKGQVGRWAIEYGNILTFATVREASH 53
           +G+RT+V ELA++L FK T  YG WFHK QVG WAIEYGN+LTFATVR A+H
Sbjct: 385 LGTRTIVGELANDLNFKTTVPYGVWFHKRQVGGWAIEYGNLLTFATVRGAAH 436

BLAST of CmaCh04G024230 vs. TAIR 10
Match: AT2G12480.2 (serine carboxypeptidase-like 43 )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 3   SRTLVRELADELKFKITALYGAWFHKGQ-VGRWAIEYGNILTFATVREASHM 54
           SRTLVRELA++L FK T  YGAWFHK Q VG W  EYGN+LTFATVR A+HM
Sbjct: 358 SRTLVRELAEDLNFKTTIPYGAWFHKEQVVGGWVTEYGNLLTFATVRGAAHM 409

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FH052.8e-1755.06Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana OX=3702 GN=SCPL42 PE=2 S... [more]
Q9MAR81.0e-1671.70Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana OX=3702 GN=SCPL44 PE=2 S... [more]
Q84W271.2e-1574.51Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana OX=3702 GN=SCPL43 PE=2 S... [more]
Q9FH062.6e-1569.23Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana OX=3702 GN=SCPL41 PE=2 S... [more]
Q8VY018.1e-0956.86Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana OX=3702 GN=SCPL46 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A6J1HG171.5e-1890.57Carboxypeptidase OS=Cucurbita moschata OX=3662 GN=LOC111463613 PE=3 SV=1[more]
W9S5E62.9e-1763.64Carboxypeptidase OS=Morus notabilis OX=981085 GN=L484_003526 PE=3 SV=1[more]
A0A6J1FG902.9e-1784.91Carboxypeptidase OS=Cucurbita moschata OX=3662 GN=LOC111445425 PE=3 SV=1[more]
A0A6J1FN172.9e-1784.91Carboxypeptidase OS=Cucurbita moschata OX=3662 GN=LOC111445425 PE=3 SV=1[more]
G7KEB84.9e-1779.25Carboxypeptidase OS=Medicago truncatula OX=3880 GN=11409958 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_023554626.18.3e-1992.45serine carboxypeptidase-like 42 [Cucurbita pepo subsp. pepo][more]
XP_022963401.13.1e-1890.57serine carboxypeptidase-like 42 [Cucurbita moschata][more]
KAG7032849.13.1e-1890.57Serine carboxypeptidase-like 42, partial [Cucurbita argyrosperma subsp. argyrosp... [more]
KAG6602158.11.6e-1788.68Serine carboxypeptidase-like 42, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022939555.15.9e-1784.91serine carboxypeptidase-like 42 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G42240.12.0e-1855.06serine carboxypeptidase-like 42 [more]
AT1G43780.17.5e-1871.70serine carboxypeptidase-like 44 [more]
AT2G12480.18.2e-1774.51serine carboxypeptidase-like 43 [more]
AT5G42230.11.8e-1669.23serine carboxypeptidase-like 41 [more]
AT2G12480.22.0e-1573.08serine carboxypeptidase-like 43 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11320coord: 2..68
e-value: 1.8E-7
score: 33.0
NoneNo IPR availablePANTHERPTHR11802:SF332CARBOXYPEPTIDASEcoord: 1..61
IPR001563Peptidase S10, serine carboxypeptidasePANTHERPTHR11802SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASEcoord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G024230.1CmaCh04G024230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005576 extracellular region
molecular_function GO:0004185 serine-type carboxypeptidase activity