CmaCh04G024130 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G024130
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionF-box protein SKP2A-like
LocationCma_Chr04: 16654782 .. 16658871 (+)
RNA-Seq ExpressionCmaCh04G024130
SyntenyCmaCh04G024130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTCTCAAAAATCCAAAATCCATTTTCACACGCACGAATCATGCTTTCCACGTGGCGCAATTTGCACTGCTCGTTGTTTGCCACCGGGCGTGATTTTTCTCCCTTCATCTTCCCTCTCCCTCTTCCAAACCCCAACACTTCTGGTCTCTTTCTCTCTACCATTTGTGTCTTTTATAGGCAATCTTTGGTTTGGACGAATTTCGTTTATTCGTAAGGCAAGCGGTCCGAGGTACTTCTAGCTTGTAATCTTTTGATTGATCGTAAGATAACACATACTGGGTGTTGAAGGTTTGATCACTGGACACCTAGGCGTTTTTTTCTTTAAAATTTATAGTACTTGTGATTGCCTTTTTCATCGCGCTGTCTTCTTTTTATTTCGTGTTGTTGTTTCCCTTTTGATAATCGAGGTTTTCTGTGTAATTTTTGTGGGTTTTCGTTTGTTTTAAACCATTGGGCAGCAGAAGCTGCAATTTCTTGAACTCGGTCGCTCTGTTTTCTGTTTATATTTTGTGGGTCTTCGTTTGTTTTCGACCATTGGGCAGCAGAAACTGCAATTTCTTGAACTGGGTCGCTCTGCTGTTTTCTGTTTATATTTTGTGGGTCTTCGTTTGTTTTCGACCATTGGGCAGCAGAAACTGCAATTTCTTGAACTGGGTCGCTCTGCTGTTTTCTGTTTATATTTGGTGGGTGTTCGTTTGTTTTCGACCATTGGGCAGCAGAAACTGCAATTTCTTGAACTGGGTCGCTCTGCTGTTTTCTGTTTATATGTTGTGGGTGTTCGTTTGTTTTCGACCATTGGGCAGCAGAAACTGTAATTTCTTGAACTGGATCGCTCTGTTTTCTGTATAAATTTTGTGGGTTTTAGTTTGTTTTCAACCATTGGGCAGAAGAAACTGTAATTTCTTGAAGTGGGTCGCTCTGTTTTCTGATTTTTCTTTGATCTTTGAAAGAAGTTGGGGATCATGGCTGCACCAGCCTTGGCCCTTTACGTTGGTTGCATATACAAAGATACCTGGTTTTTGCATGTCTTCTACTGGTTATTGTGTTCTGAGTTATAATCTTGCCTTTCTTTCTCTCAGGCGGCAGGAGCGAGAAAATTCTGGGTTTTTTTTTTCAGGGTAGTCTGATAAGTTTTAGGTAAGAGGGGGTTGTGAGAATTTTGAGTGAAATGGTTGGTAAAGACATTTTGAGGGCAGAGGACGTGAAGATGTGGTTTGAGAGAGTAATGAATCGACTTTGGTGCTAAAGGAGTTATAATATGGACGGTGGGGTGATAGCCGGATGGAAGGACATTCCTATGGAGCTTCTCTTGCAAATTATATCTCTTGTTGATGATCGAACTGTTATTGTGGCTTCAGGCGTGTGTCGTGGATGGAGGGACGCTATTTGCTTTGGACTCCTCCATCTCTCTCTCTCATGGTACTTGTTCTTATCTTTCTATTTCTTTTGAATCTTTTATCGTTTAGTTTAGTGTGATATCGCACGTTGGTTTGGGAACGAAACACCCTTTTGTAAGGGTGTGAAAATCTTTCACTAGCCGACACATTTTAAAGTCTCGAGCGGACGCCCGAAAGGGAAAACCCAAAGGTTACATTTAGCCTCTGATGTGACTTTAGGCATATTATCTTGTTTCGTTCCAGGCTTCTGACTTGTTGGGTGTCTGGTTGATATTGATTTTTCTCCTTCTGTTAAATAGTTTCATATGATATGATGAATTTGGTCTGTTTCTTCTGATTTTATTAGTACTTTACTTTAGAACTATGAGTACTTAGATTACCTATTTCCTCGCGTAATCGCAAGAGTTCCGACGAAGAATTGGTGAGATTGGAAGGTAGATAGATGATGTGATGAGTTATGTGTTTCAAAATCTTGCAAGAAAAGGGATGAAACACTTAATAAGCTCAAGCACATCATAATCATAACACATATCTTAATGATCACCTTGGAACTTGGTAGAAGTATTTTATTAGTGAATTTGTTCGATCAAGATGAATGCCTGGCAAGGCAGATGGCTAATTGCCTGTTGGTGTCAACTTCTTATTCAGGTGCAAGAAGAACATGAACAACTTGGTCCTATCCCTTGTCCCTAAATTTGCAAAACTGCAAACCTTAATCTTGCGCCAAGATAAACCCCAGCTTGCAGATGAGGCTGTTGATACCATTGCTAGTTACTGCTGCGATCTGCAGGTCCTGGACCTGAGAAAAAGTTTCAAGCTCAGTGATCGTTCCTTGTATGCTCTGGCTCATGGTTGCCGTGATCTTAAAAAGCTTAATATTAGTGGCTGTACTTCATTTAGTGACACTGCATTGGCTTATCTAGCCAGTTACTGCAGAAAGCTAAAAGTTCTTAATCTTTGTGGCTGCGTCAAGGCTACATCGGACACTGCATTGCAGGTACAATGTACAGATTAAGCGCGTATAGCGTTTATGAAGTTGATTGGTGTAATCCCCGTCGTTTTTTGTGCAGGTTATCGGGCAATACTGTAATCATTTGCAGTCTGTAAATCTAGGATGGTGTGAGAATGTGAGTGATGTGGGTGTGATGAGTTTGGCGTATGGATGTCCTGATCTCAGAAGCTTAGATTTGTGTGGCTGTGTCCTAATTACAGGTACATGGATGAACTGATCAGAGGTGGTTTTTGTTTGGTTGAGTATAATATCTGTGTGATTTATGATGTCTTTCTGGAGGCTTTATCAATCAACTTTGAAGCTTTATTGTATTACAGATTTCAACTAGTCGAATTTCATGGCCCTATAAAGAGTAGTGTTAGCGTCAAATATTCTTCACTTCTACCTCTAATTGTATGAGATCTCACATCGGTTGGAGGGGAACAAAACATTCCTTATAAGAGTGTGGAAACCTCTTTTTAGCCGATGCATTTTAAAACTGTGAGGCTGACTGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGATAAGCTTGAGCTGTTATAAATGGTATCAGAGCTAGACAACGAGCAGTGTGCCAGCAAGAATTTTGGGCCTCCAAGGGGGGTGGGTTGTGAGATCCCGCATCAGTTGAAGAGGAGAATGAAACATTTCTTATAAGGGCGGGGAAACCTCTCCCTAGCAAACACGTTTTAAAATTGTGAAGCTGACGACGATACGTAACGAGCCAAAACGGACAATATCTGCTAGCGGTAAGCTTGGGATATTACAAAGGGTATCAGAGCTAGATATTGGGCGGTGTGCCAGCGAGTACACTGGCCCCTAAAGGGGTGGATTGTGAAATCCCACATCAATTGGAGAGGAGAACAAAACATTCCTTATGAGGGTGTAGAAACCTCTTCTAACAAACACGTTTTAAAATCGTGAGGCTGATGGCGATATGTAACAGGCCAAAACGGACAATATTTGCTAGCGGTAGACTTGGGCTGTTATAGATGGCTAATAAATCAATAGTCCTTTGTTTTACACTAACTATGCTGGCAGTTATTGCCAAGCAAATAGGCTCATGAAGTTGACAGATTAACCAAAATCATGGCTTTTTTGCTTCTCTTTTAAGTCTGTTGCTTTTCATAGTTGGATCTGTTTGTGTGATCAGATGAGCTGCCTCATCAGAAACTTCTTTTGAGTGTAAATTGCGCGGTTGTTTTGCTTTTCTCTTGAACTGTTGTTGAACTGGTTTATGGCTCATGGAAACAATGGCTATTACAGTGTAGCAGAACAATGTTTGATCATTTTGCCTCATCTGCAGATAATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTTGGCCTCTACTACTGTCAGAACATAACAGACAGAGCTATGTACTCTTTGGCCCATAGCATAAAGAACAAGCCTACAAAATGGGCACCTGGGAAATGCAAGAACGATCACGATGGACTTCGAACACTTAACATTAGTCAATGCACAGCTCTTACCCCCCCTGCTGTTCAGGCAGTTTGTGATTCGTTTCCAGCGCTTCACACCTGCCCGGGTCGACATTCTCTCATCATGAGTGGCTGTCTAAATTTGATGTCTGTGCATTGTGCTTGTGCAGTCCAAGCTCACCGCACTGCTGCTTTTCATCATCCGGCTCATTGA

mRNA sequence

CCGTCTCAAAAATCCAAAATCCATTTTCACACGCACGAATCATGCTTTCCACGTGGCGCAATTTGCACTGCTCGTTGTTTGCCACCGGGCGTGATTTTTCTCCCTTCATCTTCCCTCTCCCTCTTCCAAACCCCAACACTTCTGGTCTCTTTCTCTCTACCATTTGTGTCTTTTATAGGCAATCTTTGGTTTGGACGAATTTCGTTTATTCGTAAGGCAAGCGGTCCGAGGTACTTCTAGCTTGTAATCTTTTGATTGATCGTAAGATAACACATACTGGGTGTTGAAGGCGGCAGGAGCGAGAAAATTCTGGGTTTTTTTTTTCAGGGTAGTCTGATAAGTTTTAGGTAAGAGGGGGTTGTGAGAATTTTGAGTGAAATGGTTGGTAAAGACATTTTGAGGGCAGAGGACGTGAAGATGTGGTTTGAGAGAGTAATGAATCGACTTTGGTGCTAAAGGAGTTATAATATGGACGGTGGGGTGATAGCCGGATGGAAGGACATTCCTATGGAGCTTCTCTTGCAAATTATATCTCTTGTTGATGATCGAACTGTTATTGTGGCTTCAGGCGTGTGTCGTGGATGGAGGGACGCTATTTGCTTTGGACTCCTCCATCTCTCTCTCTCATGGTGCAAGAAGAACATGAACAACTTGGTCCTATCCCTTGTCCCTAAATTTGCAAAACTGCAAACCTTAATCTTGCGCCAAGATAAACCCCAGCTTGCAGATGAGGCTGTTGATACCATTGCTAGTTACTGCTGCGATCTGCAGGTCCTGGACCTGAGAAAAAGTTTCAAGCTCAGTGATCGTTCCTTGTATGCTCTGGCTCATGGTTGCCGTGATCTTAAAAAGCTTAATATTAGTGGCTGTACTTCATTTAGTGACACTGCATTGGCTTATCTAGCCAGTTACTGCAGAAAGCTAAAAGTTCTTAATCTTTGTGGCTGCGTCAAGGCTACATCGGACACTGCATTGCAGGTTATCGGGCAATACTGTAATCATTTGCAGTCTGTAAATCTAGGATGGTGTGAGAATGTGAGTGATGTGGGTGTGATGAGTTTGGCGTATGGATGTCCTGATCTCAGAAGCTTAGATTTGTGTGGCTGTGTCCTAATTACAGATAATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTTGGCCTCTACTACTGTCAGAACATAACAGACAGAGCTATGTACTCTTTGGCCCATAGCATAAAGAACAAGCCTACAAAATGGGCACCTGGGAAATGCAAGAACGATCACGATGGACTTCGAACACTTAACATTAGTCAATGCACAGCTCTTACCCCCCCTGCTGTTCAGGCAGTTTGTGATTCGTTTCCAGCGCTTCACACCTGCCCGGGTCGACATTCTCTCATCATGAGTGGCTGTCTAAATTTGATGTCTGTGCATTGTGCTTGTGCAGTCCAAGCTCACCGCACTGCTGCTTTTCATCATCCGGCTCATTGA

Coding sequence (CDS)

ATGGACGGTGGGGTGATAGCCGGATGGAAGGACATTCCTATGGAGCTTCTCTTGCAAATTATATCTCTTGTTGATGATCGAACTGTTATTGTGGCTTCAGGCGTGTGTCGTGGATGGAGGGACGCTATTTGCTTTGGACTCCTCCATCTCTCTCTCTCATGGTGCAAGAAGAACATGAACAACTTGGTCCTATCCCTTGTCCCTAAATTTGCAAAACTGCAAACCTTAATCTTGCGCCAAGATAAACCCCAGCTTGCAGATGAGGCTGTTGATACCATTGCTAGTTACTGCTGCGATCTGCAGGTCCTGGACCTGAGAAAAAGTTTCAAGCTCAGTGATCGTTCCTTGTATGCTCTGGCTCATGGTTGCCGTGATCTTAAAAAGCTTAATATTAGTGGCTGTACTTCATTTAGTGACACTGCATTGGCTTATCTAGCCAGTTACTGCAGAAAGCTAAAAGTTCTTAATCTTTGTGGCTGCGTCAAGGCTACATCGGACACTGCATTGCAGGTTATCGGGCAATACTGTAATCATTTGCAGTCTGTAAATCTAGGATGGTGTGAGAATGTGAGTGATGTGGGTGTGATGAGTTTGGCGTATGGATGTCCTGATCTCAGAAGCTTAGATTTGTGTGGCTGTGTCCTAATTACAGATAATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTTGGCCTCTACTACTGTCAGAACATAACAGACAGAGCTATGTACTCTTTGGCCCATAGCATAAAGAACAAGCCTACAAAATGGGCACCTGGGAAATGCAAGAACGATCACGATGGACTTCGAACACTTAACATTAGTCAATGCACAGCTCTTACCCCCCCTGCTGTTCAGGCAGTTTGTGATTCGTTTCCAGCGCTTCACACCTGCCCGGGTCGACATTCTCTCATCATGAGTGGCTGTCTAAATTTGATGTCTGTGCATTGTGCTTGTGCAGTCCAAGCTCACCGCACTGCTGCTTTTCATCATCCGGCTCATTGA

Protein sequence

MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALAHGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Homology
[Close]
BLAST of CmaCh04G024130 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.4e-147
Identity = 256/341 (75.07%), Postives = 287/341 (84.16%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           M+G  I  WKDIP+ELL++I+SLVDDR VIVASGVC GWRDAI FGL  L LSWC  NMN
Sbjct: 20  MEGISIKEWKDIPVELLMRILSLVDDRNVIVASGVCTGWRDAISFGLTRLRLSWCNNNMN 79

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           +LVLSLVPKF KLQTL LRQDKPQL D AV+ IA++C +LQ LDL KS K++DRSLYALA
Sbjct: 80  SLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALA 139

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGC DL KLN+SGCTSFSDTA+AYL  +CRKLKVLNLCGCVKA +D AL+ IG  CN +Q
Sbjct: 140 HGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQ 199

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           S+NLGWCEN+SD GVMSLAYGCPDLR+LDLCGCVLITD SV+ALA+ C HLRSLGLYYC+
Sbjct: 200 SLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCR 259

Query: 241 NITDRAMYSLAHS-IKNKPTKW-APGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPA 300
           NITDRAMYSLA S +KNKP  W +  K K D +GLR+LNISQCTALTP AVQAVCDSFPA
Sbjct: 260 NITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNISQCTALTPSAVQAVCDSFPA 319

Query: 301 LHTCPGRHSLIMSGCLNLMSVHCACAVQAHRT-AAFHHPAH 339
           LHTC GRHSL+MSGCLNL +VHCAC +QAHR   A  HPAH
Sbjct: 320 LHTCSGRHSLVMSGCLNLTTVHCACILQAHRAHNAVPHPAH 360

[Close]
BLAST of CmaCh04G024130 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 1.9e-144
Identity = 248/341 (72.73%), Postives = 287/341 (84.16%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           M+G +I+ WKDIP+ELL++I++LVDDRTVI+AS +C GWRDA+  GL  LSLSWCKKNMN
Sbjct: 20  MEGVLISEWKDIPVELLMKILNLVDDRTVIIASCICSGWRDAVSLGLTRLSLSWCKKNMN 79

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           +LVLSL PKF KLQTL+LRQDKPQL D AV+ IA++C +LQ LDL KS K++D SLY+LA
Sbjct: 80  SLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLA 139

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
            GC +L KLN+SGCTSFSDTALA+L  +CRKLK+LNLCGCV+A SD  LQ IG+ CN LQ
Sbjct: 140 RGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQ 199

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           S+NLGWCEN+SD GVMSLAYGCPDLR+LDLC CVLITD SV+ALAN C HLRSLGLYYC+
Sbjct: 200 SLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCR 259

Query: 241 NITDRAMYSLAHS-IKNKPTKW-APGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPA 300
           NITDRAMYSLA S +KNK   W A  K K D +GLR+LNISQCT LTP AVQAVCD+FPA
Sbjct: 260 NITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPA 319

Query: 301 LHTCPGRHSLIMSGCLNLMSVHCACAVQAHRT-AAFHHPAH 339
           LHTC GRHSL+MSGCLNL SVHCAC +QAHRT   + HPAH
Sbjct: 320 LHTCSGRHSLVMSGCLNLQSVHCACILQAHRTHTVYPHPAH 360

[Close]
BLAST of CmaCh04G024130 vs. ExPASy Swiss-Prot
Match: A6H779 (F-box/LRR-repeat protein 2 OS=Bos taurus OX=9913 GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.2e-27
Identity = 95/334 (28.44%), Postives = 150/334 (44.91%), Query Frame = 0 

Query: 10  KDIPMELLLQIISLVDDRTVIVASGVCRGWR----------------------------- 69
           K +P ELLL+I S +D  T+   + + + W                              
Sbjct: 13  KKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENI 72

Query: 70  DAICFGLLH-LSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCD 129
              C G L  LSL  C    ++ + +       ++ L L     ++ D    +++ +C  
Sbjct: 73  SKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNL-NGCTKITDSTCYSLSRFCSK 132

Query: 130 LQVLDLRKSFKLSDRSLYALAHGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCG 189
           L+ LDL     +++ SL  ++ GCR L+ LN+S C   +   +  L   CR L+ L L G
Sbjct: 133 LKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRG 192

Query: 190 CVKATSDTALQVIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDN 249
           C +   D AL+ I  YC+ L S+NL  C  V+D GV+ L  GCP L++L L GC  +TD 
Sbjct: 193 CTQ-LEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDA 252

Query: 250 SVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNIS 309
           S+ ALA  CP L+ L    C ++TD     LA               +N HD L  +++ 
Sbjct: 253 SLTALALNCPRLQILEAARCSHLTDAGFTLLA---------------RNCHD-LEKMDLE 312

Query: 310 QCTALTPPAVQAVCDSFPALHTCPGRHSLIMSGC 314
           +C  +T   +  +     ++H CP   +L +S C
Sbjct: 313 ECILITDRTLTQL-----SIH-CPKLQALSLSHC 322

[Close]
BLAST of CmaCh04G024130 vs. ExPASy Swiss-Prot
Match: Q9UKC9 (F-box/LRR-repeat protein 2 OS=Homo sapiens OX=9606 GN=FBXL2 PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 9.3e-27
Identity = 85/295 (28.81%), Postives = 137/295 (46.44%), Query Frame = 0 

Query: 44  CFGLLHLSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVL 103
           C  + HL+L+ C K  ++   SL    +KL+ L L      + + ++  I+  C +L+ L
Sbjct: 103 CRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDL-TSCVSITNSSLKGISEGCRNLEYL 162

Query: 104 DLRKSFKLSDRSLYALAHGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKA 163
           +L    +++   + AL  GCR LK L + GCT   D AL ++ +YC +L  LNL  C + 
Sbjct: 163 NLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRI 222

Query: 164 T-------------------------SDTALQVIGQYCNHLQSVNLGWCENVSDVGVMSL 223
           T                         +D +L  +G  C  LQ +    C +++D G   L
Sbjct: 223 TDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLL 282

Query: 224 AYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSIKNKP 283
           A  C +L  +DL  C+LITD+++I L+  CP L++L L +C+ ITD  +  L++S     
Sbjct: 283 ARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNS----- 342

Query: 284 TKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIMSGC 314
                  C   H+ LR L +  C  +T  A++        L  C G   L +  C
Sbjct: 343 ------TC--GHERLRVLELDNCLLITDVALE-------HLENCRGLERLELYDC 376

[Close]
BLAST of CmaCh04G024130 vs. ExPASy Swiss-Prot
Match: Q5R3Z8 (F-box/LRR-repeat protein 2 OS=Pongo abelii OX=9601 GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.3e-27
Identity = 85/295 (28.81%), Postives = 137/295 (46.44%), Query Frame = 0 

Query: 44  CFGLLHLSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVL 103
           C  + HL+L+ C K  ++   SL    +KL+ L L      + + ++  I+  C +L+ L
Sbjct: 103 CRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDL-TSCVSITNSSLKGISEGCRNLEYL 162

Query: 104 DLRKSFKLSDRSLYALAHGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKA 163
           +L    +++   + AL  GCR LK L + GCT   D AL ++ +YC +L  LNL  C + 
Sbjct: 163 NLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRI 222

Query: 164 T-------------------------SDTALQVIGQYCNHLQSVNLGWCENVSDVGVMSL 223
           T                         +D +L  +G  C  LQ +    C +++D G   L
Sbjct: 223 TDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLL 282

Query: 224 AYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSIKNKP 283
           A  C +L  +DL  C+LITD+++I L+  CP L++L L +C+ ITD  +  L++S     
Sbjct: 283 ARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNS----- 342

Query: 284 TKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIMSGC 314
                  C   H+ LR L +  C  +T  A++        L  C G   L +  C
Sbjct: 343 ------TC--GHERLRVLELDNCLLITDVALE-------HLENCRGLERLELYDC 376

[Close]
BLAST of CmaCh04G024130 vs. ExPASy TrEMBL
Match: A0A6J1JRD0 (F-box protein SKP2A-like OS=Cucurbita maxima OX=3661 GN=LOC111486872 PE=4 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 2.8e-199
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN
Sbjct: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA
Sbjct: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
Sbjct: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
Sbjct: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240

Query: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300
           NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
Sbjct: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300

Query: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 339
           TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Sbjct: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 338

[Close]
BLAST of CmaCh04G024130 vs. ExPASy TrEMBL
Match: A0A6J1GXP4 (F-box protein SKP2A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458148 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 2.7e-194
Identity = 332/338 (98.22%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGV+AGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWC KNMN
Sbjct: 1   MDGGVLAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWC-KNMN 60

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSLVPKFAKLQTLILRQDKPQLAD+A+DTIASYC DLQVLDLRKSFKLSDRSLYALA
Sbjct: 61  NLVLSLVPKFAKLQTLILRQDKPQLADDAIDTIASYCRDLQVLDLRKSFKLSDRSLYALA 120

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
Sbjct: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
Sbjct: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240

Query: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300
           NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
Sbjct: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300

Query: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 339
           TC GRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Sbjct: 301 TCSGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 337

[Close]
BLAST of CmaCh04G024130 vs. ExPASy TrEMBL
Match: A0A1S3B3Q3 (F-box protein SKP2A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485661 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.1e-178
Identity = 309/340 (90.88%), Postives = 319/340 (93.82%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGVIAGWKDIPMELLLQI+SLVDDRTVIVASGVCRGWRDAICFGL+HLSLSWCKKNMN
Sbjct: 37  MDGGVIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMN 96

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSL PKF KLQ LILRQDKPQL+D AV+TIASYC DLQVLDL KSFKLSD SLYALA
Sbjct: 97  NLVLSLAPKFGKLQNLILRQDKPQLSDHAVETIASYCHDLQVLDLSKSFKLSDLSLYALA 156

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGC DLK+LNISGCT+FSDTALAYLASYCRKLK LNLCGCVKA SDTALQ IGQYCNHLQ
Sbjct: 157 HGCHDLKRLNISGCTAFSDTALAYLASYCRKLKFLNLCGCVKAASDTALQAIGQYCNHLQ 216

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENV+DVGVMSLAYGCPDLR+LDLCGCVLITD+SVIALANMCPHLRSLGLYYCQ
Sbjct: 217 SVNLGWCENVTDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQ 276

Query: 241 NITDRAMYSLAHS-IKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPAL 300
           NITDRAMYSLAHS IKNKPTKW  GK KND DGLRTLNISQCTALTPPAVQAVCDSFPAL
Sbjct: 277 NITDRAMYSLAHSCIKNKPTKWGTGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPAL 336

Query: 301 HTCPGRHSLIMSGCLNLMSVHCACAVQAHR-TAAFHHPAH 339
           HTC GRHSLIMSGCLNLMSVHCACAVQAHR + AF H AH
Sbjct: 337 HTCSGRHSLIMSGCLNLMSVHCACAVQAHRASTAFPHSAH 376

[Close]
BLAST of CmaCh04G024130 vs. ExPASy TrEMBL
Match: A0A0A0KFD6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G344280 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 4.6e-178
Identity = 309/340 (90.88%), Postives = 320/340 (94.12%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGV+AGWKDIPMELLLQI+SLVDDRTVIVASGVCRGWRDAICFGL HLSLSWC+KNMN
Sbjct: 37  MDGGVLAGWKDIPMELLLQILSLVDDRTVIVASGVCRGWRDAICFGLAHLSLSWCQKNMN 96

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSL PKFA+LQ LILRQDKPQL D+AV+TIASYC DLQVLDL KSFKLSD SLYALA
Sbjct: 97  NLVLSLAPKFARLQNLILRQDKPQLGDDAVETIASYCHDLQVLDLSKSFKLSDLSLYALA 156

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLK+LNISGCT+FSDTALAYLASYCRKLKVLNLCGCVKA SDTALQ IGQYCNHLQ
Sbjct: 157 HGCRDLKRLNISGCTAFSDTALAYLASYCRKLKVLNLCGCVKAASDTALQAIGQYCNHLQ 216

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENV+DVGVMSLAYGCPDLR LDLCGCVLITD+SVIALANMCPHLRSLGLYYCQ
Sbjct: 217 SVNLGWCENVTDVGVMSLAYGCPDLRILDLCGCVLITDDSVIALANMCPHLRSLGLYYCQ 276

Query: 241 NITDRAMYSLAHS-IKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPAL 300
           NITDRAMYSLAHS IKNKPTKW  GK KND DGLRTLNISQCTALTPPAVQAVCDSFPAL
Sbjct: 277 NITDRAMYSLAHSCIKNKPTKWGTGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPAL 336

Query: 301 HTCPGRHSLIMSGCLNLMSVHCACAVQAHRTA-AFHHPAH 339
           HTC GRHSLIMSGCLNL+SVHCACAVQAHR A AF H AH
Sbjct: 337 HTCSGRHSLIMSGCLNLISVHCACAVQAHRAATAFLHSAH 376

[Close]
BLAST of CmaCh04G024130 vs. ExPASy TrEMBL
Match: A0A6J1CIQ6 (F-box protein SKP2A-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011854 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177
Identity = 308/340 (90.59%), Postives = 318/340 (93.53%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           M+GGV+AGWKDIPMELLLQI+SLVDDRTVIVASGVCRGWRDAIC GL+HLS SWCKKNMN
Sbjct: 40  MEGGVVAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICLGLIHLSFSWCKKNMN 99

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSL PKF KLQTLILRQDKPQLAD+AV+TIASYC DLQVLDL KSFKLSD SLYALA
Sbjct: 100 NLVLSLAPKFGKLQTLILRQDKPQLADDAVETIASYCHDLQVLDLSKSFKLSDLSLYALA 159

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGC++FSDTALAYLASYCRKLKVLNLCGCVKA SDTALQ IG YCN LQ
Sbjct: 160 HGCRDLKKLNISGCSAFSDTALAYLASYCRKLKVLNLCGCVKAASDTALQAIGHYCNLLQ 219

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLR LDLCGCVLITD+SVIAL+NMCPHLRSLGLYYCQ
Sbjct: 220 SVNLGWCENVSDVGVMSLAYGCPDLRILDLCGCVLITDDSVIALSNMCPHLRSLGLYYCQ 279

Query: 241 NITDRAMYSLAHS-IKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPAL 300
           NITDRAMYSLAHS IKNKPTKW PGK  ND DGLRTLNISQCTALTPPAVQAVCDSFPAL
Sbjct: 280 NITDRAMYSLAHSCIKNKPTKWGPGKGMNDDDGLRTLNISQCTALTPPAVQAVCDSFPAL 339

Query: 301 HTCPGRHSLIMSGCLNLMSVHCACAVQAHRT-AAFHHPAH 339
           HTC GRHSLIMSGCLNLMSVHCACAVQAHR   AF HPAH
Sbjct: 340 HTCSGRHSLIMSGCLNLMSVHCACAVQAHRAPTAFAHPAH 379

[Close]
BLAST of CmaCh04G024130 vs. NCBI nr
Match: XP_022989791.1 (F-box protein SKP2A-like [Cucurbita maxima] >XP_022989792.1 F-box protein SKP2A-like [Cucurbita maxima] >XP_022989793.1 F-box protein SKP2A-like [Cucurbita maxima])

HSP 1 Score: 704.1 bits (1816), Expect = 5.7e-199
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN
Sbjct: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA
Sbjct: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
Sbjct: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
Sbjct: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240

Query: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300
           NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
Sbjct: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300

Query: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 339
           TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Sbjct: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 338

[Close]
BLAST of CmaCh04G024130 vs. NCBI nr
Match: XP_023525237.1 (F-box protein SKP2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 695.3 bits (1793), Expect = 2.6e-196
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN
Sbjct: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSLVPKFAKLQTLILRQDKPQLAD+AVDTIASYC DLQVLDLRKSFKLSDRSLYALA
Sbjct: 61  NLVLSLVPKFAKLQTLILRQDKPQLADDAVDTIASYCRDLQVLDLRKSFKLSDRSLYALA 120

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
Sbjct: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
Sbjct: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240

Query: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300
           NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
Sbjct: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300

Query: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 339
           TC GRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Sbjct: 301 TCSGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 338

[Close]
BLAST of CmaCh04G024130 vs. NCBI nr
Match: KAG6602148.1 (F-box protein SKP2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 692.2 bits (1785), Expect = 2.2e-195
Identity = 334/338 (98.82%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGVIA WKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN
Sbjct: 1   MDGGVIARWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSLVPKFAKLQTLILRQDKPQLAD+AVDTIASYC DLQVLDLRKSFKLSDRSLYALA
Sbjct: 61  NLVLSLVPKFAKLQTLILRQDKPQLADDAVDTIASYCRDLQVLDLRKSFKLSDRSLYALA 120

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
Sbjct: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
Sbjct: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240

Query: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300
           NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
Sbjct: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300

Query: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 339
           TC GRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Sbjct: 301 TCSGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 338

[Close]
BLAST of CmaCh04G024130 vs. NCBI nr
Match: XP_022956400.1 (F-box protein SKP2A-like isoform X1 [Cucurbita moschata] >XP_022956405.1 F-box protein SKP2A-like isoform X1 [Cucurbita moschata] >XP_022956415.1 F-box protein SKP2A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 687.6 bits (1773), Expect = 5.5e-194
Identity = 332/338 (98.22%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGV+AGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWC KNMN
Sbjct: 1   MDGGVLAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWC-KNMN 60

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSLVPKFAKLQTLILRQDKPQLAD+A+DTIASYC DLQVLDLRKSFKLSDRSLYALA
Sbjct: 61  NLVLSLVPKFAKLQTLILRQDKPQLADDAIDTIASYCRDLQVLDLRKSFKLSDRSLYALA 120

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
Sbjct: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
Sbjct: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240

Query: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300
           NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
Sbjct: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300

Query: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 339
           TC GRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Sbjct: 301 TCSGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 337

[Close]
BLAST of CmaCh04G024130 vs. NCBI nr
Match: KAG7032838.1 (F-box protein SKP2A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 686.8 bits (1771), Expect = 9.4e-194
Identity = 331/338 (97.93%), Postives = 333/338 (98.52%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           MDGGVIA WKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN
Sbjct: 1   MDGGVIARWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           NLVLSLVPKFAKLQTLILRQDKPQLAD+A+DTIASYC DLQVLDLRKSFKLSDRSLYALA
Sbjct: 61  NLVLSLVPKFAKLQTLILRQDKPQLADDAIDTIASYCRDLQVLDLRKSFKLSDRSLYALA 120

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
Sbjct: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
Sbjct: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240

Query: 241 NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300
           NITDRAMYSLAH IKNKPTKWA GKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
Sbjct: 241 NITDRAMYSLAHGIKNKPTKWAHGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH 300

Query: 301 TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 339
           TC GRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
Sbjct: 301 TCSGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH 338

[Close]
BLAST of CmaCh04G024130 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 523.1 bits (1346), Expect = 1.7e-148
Identity = 256/341 (75.07%), Postives = 287/341 (84.16%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           M+G  I  WKDIP+ELL++I+SLVDDR VIVASGVC GWRDAI FGL  L LSWC  NMN
Sbjct: 20  MEGISIKEWKDIPVELLMRILSLVDDRNVIVASGVCTGWRDAISFGLTRLRLSWCNNNMN 79

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           +LVLSLVPKF KLQTL LRQDKPQL D AV+ IA++C +LQ LDL KS K++DRSLYALA
Sbjct: 80  SLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALA 139

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
           HGC DL KLN+SGCTSFSDTA+AYL  +CRKLKVLNLCGCVKA +D AL+ IG  CN +Q
Sbjct: 140 HGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQ 199

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           S+NLGWCEN+SD GVMSLAYGCPDLR+LDLCGCVLITD SV+ALA+ C HLRSLGLYYC+
Sbjct: 200 SLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCR 259

Query: 241 NITDRAMYSLAHS-IKNKPTKW-APGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPA 300
           NITDRAMYSLA S +KNKP  W +  K K D +GLR+LNISQCTALTP AVQAVCDSFPA
Sbjct: 260 NITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNISQCTALTPSAVQAVCDSFPA 319

Query: 301 LHTCPGRHSLIMSGCLNLMSVHCACAVQAHRT-AAFHHPAH 339
           LHTC GRHSL+MSGCLNL +VHCAC +QAHR   A  HPAH
Sbjct: 320 LHTCSGRHSLVMSGCLNLTTVHCACILQAHRAHNAVPHPAH 360

[Close]
BLAST of CmaCh04G024130 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein )

HSP 1 Score: 513.5 bits (1321), Expect = 1.3e-145
Identity = 248/341 (72.73%), Postives = 287/341 (84.16%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           M+G +I+ WKDIP+ELL++I++LVDDRTVI+AS +C GWRDA+  GL  LSLSWCKKNMN
Sbjct: 20  MEGVLISEWKDIPVELLMKILNLVDDRTVIIASCICSGWRDAVSLGLTRLSLSWCKKNMN 79

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           +LVLSL PKF KLQTL+LRQDKPQL D AV+ IA++C +LQ LDL KS K++D SLY+LA
Sbjct: 80  SLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLA 139

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
            GC +L KLN+SGCTSFSDTALA+L  +CRKLK+LNLCGCV+A SD  LQ IG+ CN LQ
Sbjct: 140 RGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQ 199

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           S+NLGWCEN+SD GVMSLAYGCPDLR+LDLC CVLITD SV+ALAN C HLRSLGLYYC+
Sbjct: 200 SLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCR 259

Query: 241 NITDRAMYSLAHS-IKNKPTKW-APGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPA 300
           NITDRAMYSLA S +KNK   W A  K K D +GLR+LNISQCT LTP AVQAVCD+FPA
Sbjct: 260 NITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPA 319

Query: 301 LHTCPGRHSLIMSGCLNLMSVHCACAVQAHRT-AAFHHPAH 339
           LHTC GRHSL+MSGCLNL SVHCAC +QAHRT   + HPAH
Sbjct: 320 LHTCSGRHSLVMSGCLNLQSVHCACILQAHRTHTVYPHPAH 360

[Close]
BLAST of CmaCh04G024130 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein )

HSP 1 Score: 513.5 bits (1321), Expect = 1.3e-145
Identity = 248/341 (72.73%), Postives = 287/341 (84.16%), Query Frame = 0 

Query: 1   MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN 60
           M+G +I+ WKDIP+ELL++I++LVDDRTVI+AS +C GWRDA+  GL  LSLSWCKKNMN
Sbjct: 20  MEGVLISEWKDIPVELLMKILNLVDDRTVIIASCICSGWRDAVSLGLTRLSLSWCKKNMN 79

Query: 61  NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA 120
           +LVLSL PKF KLQTL+LRQDKPQL D AV+ IA++C +LQ LDL KS K++D SLY+LA
Sbjct: 80  SLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLA 139

Query: 121 HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ 180
            GC +L KLN+SGCTSFSDTALA+L  +CRKLK+LNLCGCV+A SD  LQ IG+ CN LQ
Sbjct: 140 RGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQ 199

Query: 181 SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ 240
           S+NLGWCEN+SD GVMSLAYGCPDLR+LDLC CVLITD SV+ALAN C HLRSLGLYYC+
Sbjct: 200 SLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCR 259

Query: 241 NITDRAMYSLAHS-IKNKPTKW-APGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPA 300
           NITDRAMYSLA S +KNK   W A  K K D +GLR+LNISQCT LTP AVQAVCD+FPA
Sbjct: 260 NITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPA 319

Query: 301 LHTCPGRHSLIMSGCLNLMSVHCACAVQAHRT-AAFHHPAH 339
           LHTC GRHSL+MSGCLNL SVHCAC +QAHRT   + HPAH
Sbjct: 320 LHTCSGRHSLVMSGCLNLQSVHCACILQAHRTHTVYPHPAH 360

[Close]
BLAST of CmaCh04G024130 vs. TAIR 10
Match: AT5G23340.1 (RNI-like superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.7e-26
Identity = 67/201 (33.33%), Postives = 107/201 (53.23%), Query Frame = 0 

Query: 85  LADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALAHGCRDLKKLNISGCTSFSDTALAY 144
           + D  + +I      LQ LD+    KLSD+ L A+A GC DL+ L+++GC   +D +L  
Sbjct: 111 ITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKS 170

Query: 145 LASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQSVNLGWCENVSDVGVMSLAYGC-P 204
           L+  CR L+ L L GC   T D+ L  + + C  ++S+++  C NV D GV S+A  C  
Sbjct: 171 LSERCRDLEALGLQGCTNIT-DSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACAS 230

Query: 205 DLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSIKNKPTKWAP 264
            L++L L  C  + + S+ +LA  C +L +L +  C++I+D ++  LA S K+       
Sbjct: 231 SLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRM 290

Query: 265 GKCKNDHDGLRTLNISQCTAL 285
             C N  D   +  + QC  L
Sbjct: 291 DWCLNISDSSLSCILKQCKNL 310

[Close]
BLAST of CmaCh04G024130 vs. TAIR 10
Match: AT4G15475.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-23
Identity = 66/214 (30.84%), Postives = 103/214 (48.13%), Query Frame = 0 

Query: 84  QLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALAHGCRDLKKLNISGCTSFSDTALA 143
           ++ + A+  I   C  L++L L     + D ++ ++A GCR+LKKL+I  C    +  + 
Sbjct: 384 RIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGII 443

Query: 144 YLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 203
            +  +C+ L  L+L  C K   + AL  IG+ C+ LQ +N+  C  +SD G+ ++A GCP
Sbjct: 444 SIGKHCKSLTELSLRFCDK-VGNKALIAIGKGCS-LQQLNVSGCNQISDAGITAIARGCP 503

Query: 204 DLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSIKNKPTKWAP 263
            L  LD+     I D  +  L   CP L+ L L +C +ITD  +  L             
Sbjct: 504 QLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQ----------- 563

Query: 264 GKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFP 298
            KCK     L T ++  C  +T   V  V  S P
Sbjct: 564 -KCKL----LETCHMVYCPGITSAGVATVVSSCP 579

The following BLAST results are available for this feature:
BLAST of CmaCh04G024130 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LPL42.4e-14775.07F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1[more]
O492861.9e-14472.73F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1[more]
A6H7794.2e-2728.44F-box/LRR-repeat protein 2 OS=Bos taurus OX=9913 GN=FBXL2 PE=2 SV=1[more]
Q9UKC99.3e-2728.81F-box/LRR-repeat protein 2 OS=Homo sapiens OX=9606 GN=FBXL2 PE=1 SV=3[more]
Q5R3Z89.3e-2728.81F-box/LRR-repeat protein 2 OS=Pongo abelii OX=9601 GN=FBXL2 PE=2 SV=1[more]
BLAST of CmaCh04G024130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JRD02.8e-199100.00F-box protein SKP2A-like OS=Cucurbita maxima OX=3661 GN=LOC111486872 PE=4 SV=1[more]
A0A6J1GXP42.7e-19498.22F-box protein SKP2A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145814... [more]
A0A1S3B3Q32.1e-17890.88F-box protein SKP2A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485661 PE=4 SV=1[more]
A0A0A0KFD64.6e-17890.88F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G344280 PE=4 ... [more]
A0A6J1CIQ61.0e-17790.59F-box protein SKP2A-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110118... [more]
BLAST of CmaCh04G024130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022989791.15.7e-199100.00F-box protein SKP2A-like [Cucurbita maxima] >XP_022989792.1 F-box protein SKP2A-... [more]
XP_023525237.12.6e-19699.11F-box protein SKP2A-like [Cucurbita pepo subsp. pepo][more]
KAG6602148.12.2e-19598.82F-box protein SKP2A, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022956400.15.5e-19498.22F-box protein SKP2A-like isoform X1 [Cucurbita moschata] >XP_022956405.1 F-box p... [more]
KAG7032838.19.4e-19497.93F-box protein SKP2A, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmaCh04G024130 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G21410.11.7e-14875.07F-box/RNI-like superfamily protein [more]
AT1G77000.11.3e-14572.73RNI-like superfamily protein [more]
AT1G77000.21.3e-14572.73RNI-like superfamily protein [more]
AT5G23340.14.7e-2633.33RNI-like superfamily protein [more]
AT4G15475.18.4e-2330.84F-box/RNI-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 97..122
e-value: 0.28
score: 20.2
coord: 202..227
e-value: 9.1E-7
score: 38.5
coord: 176..201
e-value: 3.6E-6
score: 36.5
coord: 149..175
e-value: 12.0
score: 14.0
coord: 266..295
e-value: 8.3
score: 15.2
coord: 123..148
e-value: 1.6E-5
score: 34.4
coord: 44..69
e-value: 550.0
score: 1.0
coord: 228..253
e-value: 5.7E-8
score: 42.5
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 228..251
e-value: 0.85
score: 9.9
coord: 202..225
e-value: 0.74
score: 10.0
coord: 175..199
e-value: 4.5E-4
score: 20.1
NoneNo IPR availableGENE3D1.20.1280.50coord: 8..43
e-value: 1.6E-6
score: 29.8
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 2..320
NoneNo IPR availablePANTHERPTHR13318:SF154F-BOX SKP2A-LIKE PROTEINcoord: 2..320
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 43..299
IPR001810F-box domainPFAMPF00646F-boxcoord: 9..44
e-value: 6.7E-7
score: 29.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 44..331
e-value: 1.2E-46
score: 161.0
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 9..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G024130.1CmaCh04G024130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component GO:0019005 SCF ubiquitin ligase complex
molecular_function GO:0005515 protein binding