CmaCh04G024100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G024100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BEST Arabidopsis thaliana protein match is: embryo defective 2170 .
Location	Cma_Chr04: 16637868 .. 16639031 (-)
RNA-Seq Expression	CmaCh04G024100
Synteny	CmaCh04G024100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACAAATCATTTCATTTCAACTGCTTCCTCTCCAATTCCTTCCATCCAAGATTCCACGGAGCAACCGCCATGGGAGATCTTACGATGAAATTCCCTAGAAATCCGATCCATACCGCCGAAGATTGCATCATTTTCAGAGGCTTGGACAGTGCCGTCGACGATGACGACTCGCAATCGGAATCTGGAGTCTGTTCACCCACGCTCTGGGGTTCAGATTCTCGGATGAGCCCCCAATTTCATCGCTCGCGTAATCGCACTCTCTCTCCGACTTCCCGGACTCAAGCCATCGCCAGAGGACAGCAGGAGCTCATGGAAATGGTCAGGAACATGCCAGAATCCTCCTACGAGCTTTCTCTCAAAGATCTTGTCGAACATCACTTGCGCCAACAAGAGAGCGCCTCCGTCGAGAAATATGATTCCACCTCTGAAACTTCCTTCATAAGAGATCCTATCAAGAAGAGGAGTGAAACCAGAGCACTCGTTACCAGAAGTAGAAGCGTCAATAGCGGTGGATTTTATCTCAAAATGTTCTTCCCGATGCCGTTAGGGCAAATTTCAACGAAAAAGAAGAGTAATCTTAGAAGCGACTCGGCGTTGAATGGACGTTCGAGAGTGTCCCCTAAGCCACCGCAAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCAGCAACCTCCGGCGAGAATGGCGGCAGTGTCTCCGGCAGTAGTAGTAGCAACAGCAATAGCACAAGCAGCGAAAGAAGCAATAGCAGGTAAACCCAGAATAACCGTAATTTCATCAATTATTCGGTGGTTGGAATCTTGGAAACACTCTGAAAAACTGGGATTCGTTAATTTACTTGAATTTGGCTTCATATGATCCATGAACTTGCTGAAATCCATGGTAATAATTCATGAAATCTTGACTTTGATTTGATTTACAGGAACTCTGAATCAAAAGGGAGTTGCTGGTTTTGTATCAGTCCAATCAGAAGCAAAAATCCAGAGTAAAACAAACAGCTTCATCGGAGAAATCAAATCAAATAAAATCAAATCAATCTTAATATGTAATAACTTTTTGTTTTATTTCTATAAAAATTATTCCTTCGTTTTCTGCTTTAATTCCCATGTTTTATATCTCTTGGTTATACTTCTTAGTTTCAAGAACAAATATAGATTCCAG

mRNA sequence

TAAACAAATCATTTCATTTCAACTGCTTCCTCTCCAATTCCTTCCATCCAAGATTCCACGGAGCAACCGCCATGGGAGATCTTACGATGAAATTCCCTAGAAATCCGATCCATACCGCCGAAGATTGCATCATTTTCAGAGGCTTGGACAGTGCCGTCGACGATGACGACTCGCAATCGGAATCTGGAGTCTGTTCACCCACGCTCTGGGGTTCAGATTCTCGGATGAGCCCCCAATTTCATCGCTCGCGTAATCGCACTCTCTCTCCGACTTCCCGGACTCAAGCCATCGCCAGAGGACAGCAGGAGCTCATGGAAATGGTCAGGAACATGCCAGAATCCTCCTACGAGCTTTCTCTCAAAGATCTTGTCGAACATCACTTGCGCCAACAAGAGAGCGCCTCCGTCGAGAAATATGATTCCACCTCTGAAACTTCCTTCATAAGAGATCCTATCAAGAAGAGGAGTGAAACCAGAGCACTCGTTACCAGAAGTAGAAGCGTCAATAGCGGTGGATTTTATCTCAAAATGTTCTTCCCGATGCCGTTAGGGCAAATTTCAACGAAAAAGAAGAGTAATCTTAGAAGCGACTCGGCGTTGAATGGACGTTCGAGAGTGTCCCCTAAGCCACCGCAAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCAGCAACCTCCGGCGAGAATGGCGGCAGTGTCTCCGGCAGTAGTAGTAGCAACAGCAATAGCACAAGCAGCGAAAGAAGCAATAGCAGGAACTCTGAATCAAAAGGGAGTTGCTGGTTTTGTATCAGTCCAATCAGAAGCAAAAATCCAGAGTAAAACAAACAGCTTCATCGGAGAAATCAAATCAAATAAAATCAAATCAATCTTAATATGTAATAACTTTTTGTTTTATTTCTATAAAAATTATTCCTTCGTTTTCTGCTTTAATTCCCATGTTTTATATCTCTTGGTTATACTTCTTAGTTTCAAGAACAAATATAGATTCCAG

Coding sequence (CDS)

ATGGGAGATCTTACGATGAAATTCCCTAGAAATCCGATCCATACCGCCGAAGATTGCATCATTTTCAGAGGCTTGGACAGTGCCGTCGACGATGACGACTCGCAATCGGAATCTGGAGTCTGTTCACCCACGCTCTGGGGTTCAGATTCTCGGATGAGCCCCCAATTTCATCGCTCGCGTAATCGCACTCTCTCTCCGACTTCCCGGACTCAAGCCATCGCCAGAGGACAGCAGGAGCTCATGGAAATGGTCAGGAACATGCCAGAATCCTCCTACGAGCTTTCTCTCAAAGATCTTGTCGAACATCACTTGCGCCAACAAGAGAGCGCCTCCGTCGAGAAATATGATTCCACCTCTGAAACTTCCTTCATAAGAGATCCTATCAAGAAGAGGAGTGAAACCAGAGCACTCGTTACCAGAAGTAGAAGCGTCAATAGCGGTGGATTTTATCTCAAAATGTTCTTCCCGATGCCGTTAGGGCAAATTTCAACGAAAAAGAAGAGTAATCTTAGAAGCGACTCGGCGTTGAATGGACGTTCGAGAGTGTCCCCTAAGCCACCGCAAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCAGCAACCTCCGGCGAGAATGGCGGCAGTGTCTCCGGCAGTAGTAGTAGCAACAGCAATAGCACAAGCAGCGAAAGAAGCAATAGCAGGAACTCTGAATCAAAAGGGAGTTGCTGGTTTTGTATCAGTCCAATCAGAAGCAAAAATCCAGAGTAA

Protein sequence

MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSRNRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSETSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRSRVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCISPIRSKNPE

Homology

[Close]

BLAST of CmaCh04G024100 vs. ExPASy TrEMBL
Match: A0A6J1JND4 (uncharacterized protein LOC111486878 OS=Cucurbita maxima OX=3661 GN=LOC111486878 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.8e-131
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60
           MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR
Sbjct: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60

Query: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120
           NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE
Sbjct: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120

Query: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180
           TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS
Sbjct: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180

Query: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240
           RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI
Sbjct: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240

Query: 241 SPIRSKNPE 250
           SPIRSKNPE
Sbjct: 241 SPIRSKNPE 249

[Close]

BLAST of CmaCh04G024100 vs. ExPASy TrEMBL
Match: A0A6J1HEJ4 (uncharacterized protein LOC111462165 OS=Cucurbita moschata OX=3662 GN=LOC111462165 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.5e-129
Identity = 243/249 (97.59%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60
           MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRM+PQFHRSR
Sbjct: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMNPQFHRSR 60

Query: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120
           NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESAS+EKYDS SE
Sbjct: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASIEKYDSASE 120

Query: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180
           TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLG+ISTKKKSN+RSDSALNG S
Sbjct: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGKISTKKKSNVRSDSALNGSS 180

Query: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240
           RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI
Sbjct: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240

Query: 241 SPIRSKNPE 250
           SPIRSKNPE
Sbjct: 241 SPIRSKNPE 249

[Close]

BLAST of CmaCh04G024100 vs. ExPASy TrEMBL
Match: A0A1S3B3A7 (uncharacterized protein LOC103485667 OS=Cucumis melo OX=3656 GN=LOC103485667 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 5.2e-94
Identity = 197/271 (72.69%), Postives = 220/271 (81.18%), Query Frame = 0


Query: 1   MGDLTMKFPRNPI------------HTAEDCIIFRGLDSAVD-DDDSQSESGVCSPTLWG 60
           MGD+  KFP  PI            H +EDCIIFRG DSA   DDDSQSESGV SPTLW 
Sbjct: 1   MGDINTKFPPKPIPPNPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWA 60

Query: 61  SDSRMSPQFHRSRNRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHL--- 120
           S+SR +PQFHR RNR+LSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHL   
Sbjct: 61  SNSRTTPQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNS 120

Query: 121 -RQQES--ASVEKYDSTSETSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQ 180
            RQQ+   AS+ + DS+SETSF RDP K R ETRALVTRSRSV+SGGFYLKMFFP+P GQ
Sbjct: 121 KRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQ 180

Query: 181 ISTKKKSNLRSDSALNGRSRVSPKPPQVDRDWWRKRSSATSGENGGSVSG---SSSSNSN 240
           +S KKK+NLR+DS L+G SRVSPKPP VD+DWWRKRSS + GEN GS+SG   +SS +SN
Sbjct: 181 VSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSN 240

Query: 241 STSSERSNSRNSESKGSCWFCISPIRSKNPE 250
           STSSERSNSRNSES+GSCWFCISP+RSK+ E
Sbjct: 241 STSSERSNSRNSESQGSCWFCISPMRSKDRE 271

[Close]

BLAST of CmaCh04G024100 vs. ExPASy TrEMBL
Match: A0A0A0KCW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G349820 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.7e-92
Identity = 195/267 (73.03%), Postives = 220/267 (82.40%), Query Frame = 0


Query: 1   MGDLTMKFP-------RNPIHTAEDCIIFRGLDSAVD-DDDSQSESGVCSPTLWGSDSRM 60
           MGD+  K P       ++P H +EDCIIFRG DSA   DDDSQSESGV SPTLW S+SR 
Sbjct: 1   MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRT 60

Query: 61  SPQF-HRSRNRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHL----RQQ 120
           +PQF HR RNR+LSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHL    RQQ
Sbjct: 61  TPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQ 120

Query: 121 ES--ASVEKYDSTSETSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTK 180
           +   AS+ + DS+SETSF RDP K R ETRALVTRSRSV+SGGFYLKMFFP+P GQ+S K
Sbjct: 121 DGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAK 180

Query: 181 KKSNLRSDSALNGRSRVSPKPPQVDRDWWRKRSSATSGENGGSVSG---SSSSNSNSTSS 240
           KK+NLR+DS L+G SRVSPKPP VD+DWWRKRSS + GEN GS+SG   +SS +SNSTSS
Sbjct: 181 KKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSS 240

Query: 241 ERSNSRNSESKGSCWFCISPIRSKNPE 250
           ERSNSRNSES+GSCWFCISP+RSK+ E
Sbjct: 241 ERSNSRNSESQGSCWFCISPMRSKDRE 267

[Close]

BLAST of CmaCh04G024100 vs. ExPASy TrEMBL
Match: A0A6J1FJY2 (uncharacterized protein LOC111444710 OS=Cucurbita moschata OX=3662 GN=LOC111444710 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89
Identity = 188/243 (77.37%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 11  NPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSRNRTLSPTSRT 70
           NPIHTAEDCIIFRG DSA  DDDSQSESGVCSPTLWGS+SR + QFHR RNR+LSPTSRT
Sbjct: 3   NPIHTAEDCIIFRGWDSAAGDDDSQSESGVCSPTLWGSNSRTNLQFHRPRNRSLSPTSRT 62

Query: 71  QAIARGQQELMEMVRNMPESSYELSLKDLVEHHL----RQQESASVEKYDSTSETSFIRD 130
           QAIARGQQELMEMVRNMPESSYELSLKDLVEHHL    RQ   AS+ + DS SETSF RD
Sbjct: 63  QAIARGQQELMEMVRNMPESSYELSLKDLVEHHLSNSERQDGDASLSRDDSASETSFRRD 122

Query: 131 PIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRSRVSPKP 190
             K RSETRALVTRSRSV+SGGFYLKMF P+P GQ+S KKK NLR+DS LN  SRVSPKP
Sbjct: 123 TSKTRSETRALVTRSRSVDSGGFYLKMFLPLPFGQMSAKKKRNLRTDSGLNSSSRVSPKP 182

Query: 191 PQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCISPIRSK 250
           P VDR+WWRKRS      N GSVSG S   SNSTSSER  SRNSES+G CWFCISP+RSK
Sbjct: 183 PPVDREWWRKRS------NEGSVSGGS---SNSTSSER--SRNSESQGGCWFCISPMRSK 234

[Close]

BLAST of CmaCh04G024100 vs. NCBI nr
Match: XP_022989800.1 (uncharacterized protein LOC111486878 [Cucurbita maxima])

HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-131
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60
           MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR
Sbjct: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60

Query: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120
           NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE
Sbjct: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120

Query: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180
           TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS
Sbjct: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180

Query: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240
           RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI
Sbjct: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240

Query: 241 SPIRSKNPE 250
           SPIRSKNPE
Sbjct: 241 SPIRSKNPE 249

[Close]

BLAST of CmaCh04G024100 vs. NCBI nr
Match: XP_023527832.1 (uncharacterized protein LOC111790927 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470.7 bits (1210), Expect = 7.8e-129
Identity = 245/249 (98.39%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60
           MGDLTMKFPRNPIHTAEDCIIFRGL SAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR
Sbjct: 1   MGDLTMKFPRNPIHTAEDCIIFRGLSSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60

Query: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120
           NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDS SE
Sbjct: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSASE 120

Query: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180
           TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNG S
Sbjct: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGSS 180

Query: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240
           RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSS+NSNSTSSERSNSRNSESKGSCWFCI
Sbjct: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSNNSNSTSSERSNSRNSESKGSCWFCI 240

Query: 241 SPIRSKNPE 250
           SPIRSKNPE
Sbjct: 241 SPIRSKNPE 249

[Close]

BLAST of CmaCh04G024100 vs. NCBI nr
Match: XP_022961604.1 (uncharacterized protein LOC111462165 [Cucurbita moschata])

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 243/249 (97.59%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60
           MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRM+PQFHRSR
Sbjct: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMNPQFHRSR 60

Query: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120
           NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESAS+EKYDS SE
Sbjct: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASIEKYDSASE 120

Query: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180
           TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLG+ISTKKKSN+RSDSALNG S
Sbjct: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGKISTKKKSNVRSDSALNGSS 180

Query: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240
           RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI
Sbjct: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240

Query: 241 SPIRSKNPE 250
           SPIRSKNPE
Sbjct: 241 SPIRSKNPE 249

[Close]

BLAST of CmaCh04G024100 vs. NCBI nr
Match: KAG7032834.1 (hypothetical protein SDJN02_06884, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 245/249 (98.39%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MGDLTMKFPRNPIHTAEDCIIFRGLDSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 60
           MGDLTMKFPRNPIHTAEDCIIFRGL SAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR
Sbjct: 37  MGDLTMKFPRNPIHTAEDCIIFRGLSSAVDDDDSQSESGVCSPTLWGSDSRMSPQFHRSR 96

Query: 61  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSTSE 120
           NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDS SE
Sbjct: 97  NRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLRQQESASVEKYDSASE 156

Query: 121 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGRS 180
           TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNG S
Sbjct: 157 TSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQISTKKKSNLRSDSALNGSS 216

Query: 181 RVSPKPPQVDRDWWRKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 240
           RVSPKPPQVDRDWWRKRSSATSGEN GSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI
Sbjct: 217 RVSPKPPQVDRDWWRKRSSATSGENSGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCI 276

Query: 241 SPIRSKNPE 250
           SPIRSKNPE
Sbjct: 277 SPIRSKNPE 285

[Close]

BLAST of CmaCh04G024100 vs. NCBI nr
Match: XP_008441584.1 (PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 1.1e-93
Identity = 197/271 (72.69%), Postives = 220/271 (81.18%), Query Frame = 0


Query: 1   MGDLTMKFPRNPI------------HTAEDCIIFRGLDSAVD-DDDSQSESGVCSPTLWG 60
           MGD+  KFP  PI            H +EDCIIFRG DSA   DDDSQSESGV SPTLW 
Sbjct: 1   MGDINTKFPPKPIPPNPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWA 60

Query: 61  SDSRMSPQFHRSRNRTLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHL--- 120
           S+SR +PQFHR RNR+LSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHL   
Sbjct: 61  SNSRTTPQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNS 120

Query: 121 -RQQES--ASVEKYDSTSETSFIRDPIKKRSETRALVTRSRSVNSGGFYLKMFFPMPLGQ 180
            RQQ+   AS+ + DS+SETSF RDP K R ETRALVTRSRSV+SGGFYLKMFFP+P GQ
Sbjct: 121 KRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQ 180

Query: 181 ISTKKKSNLRSDSALNGRSRVSPKPPQVDRDWWRKRSSATSGENGGSVSG---SSSSNSN 240
           +S KKK+NLR+DS L+G SRVSPKPP VD+DWWRKRSS + GEN GS+SG   +SS +SN
Sbjct: 181 VSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSN 240

Query: 241 STSSERSNSRNSESKGSCWFCISPIRSKNPE 250
           STSSERSNSRNSES+GSCWFCISP+RSK+ E
Sbjct: 241 STSSERSNSRNSESQGSCWFCISPMRSKDRE 271

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BLAST of CmaCh04G024100 vs. TAIR 10
Match: AT1G21390.1 (embryo defective 2170 )

HSP 1 Score: 112.1 bits (279), Expect = 6.6e-25
Identity = 92/219 (42.01%), Postives = 123/219 (56.16%), Query Frame = 0


Query: 32  DDSQSESGVCSPTLW-GSDSRMSPQFHRSRNR-TLSPTSRTQAIARGQQELMEMVRNMPE 91
           +D  S+SGVCSPTLW  S  +  P FHR  +  +LSP S+ QAIARGQ+ELMEMV  MPE
Sbjct: 21  NDDHSDSGVCSPTLWRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPE 80

Query: 92  SSYELSLKDLVEHHLRQQESASVEKYDSTSETSFIRDPI--KKRSETRALVTRSRSVNSG 151
           S YELSLKDLVE  + Q+    V  +D   + +  +  +  K +S+ R    RS   N+ 
Sbjct: 81  SCYELSLKDLVEVKVNQENERKV--FDELPKRANRQSKVVRKTKSDKRVDPNRSGGGNNS 140

Query: 152 GFYLKMFFPMPLGQI--STKKKSNLRSDSALNGRSRVSPKP-------PQVDRDWWRKRS 211
           GF LK+ F + LG +  +TKKK   + D A     +VSP+P          D++WW + S
Sbjct: 141 GFLLKIMFLVSLGAMKDTTKKKKKKKKDEA----CKVSPRPSISEETVKVEDKEWWNRMS 200

Query: 212 SATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCW 238
                E+    SGSSSSN    +S RS S   + K SC+
Sbjct: 201 -----ESSTKRSGSSSSN----NSIRSRSSLRDEKSSCF 224

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BLAST of CmaCh04G024100 vs. TAIR 10
Match: AT1G76980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 4.7e-23
Identity = 86/234 (36.75%), Postives = 120/234 (51.28%), Query Frame = 0


Query: 33  DSQSESGVCSPTLWGSDSRMSPQFHRSRNRTLSPTSRTQAIARGQQELMEMVRNMPESSY 92
           D  S+SGVCSP LW +    SP    +  + LSP ++ Q IARGQ+ELM+MV  MPES Y
Sbjct: 22  DDHSDSGVCSPPLWRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCY 81

Query: 93  ELSLKDLVEHHLRQQESASVEKYDSTSETSFIRDPIKKRSETRALVTRSRSVNSGGFYLK 152
           ELSLKDLVE +  +++               +R   K +S+      R+  VN+ GF LK
Sbjct: 82  ELSLKDLVEVNTEEEKVFDEMPQREKKPRKVVR---KTKSDKWVDPIRNGGVNNSGFLLK 141

Query: 153 MFFPMPLG--QISTKKKSNLRSDSALNG-RSRVSPKPPQV--------DRDWW------- 212
           + FP+ LG  + + KKK N   DS++   RS +S   P +        D+DWW       
Sbjct: 142 LVFPVSLGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSES 201

Query: 213 RKRSSATSGENGGSVSGSSSSNSNSTSSERSNSRNSESKGSCWFCISPIRSKNP 249
           R+  S  S  N GS   S  S+S S S    NS   E++G    C+S + + +P
Sbjct: 202 RRSQSVVSRINSGSSKSSGGSSSRSNSDRSRNSLRDENRG----CLSFLWNVHP 248

[Close]

BLAST of CmaCh04G024100 vs. TAIR 10
Match: AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22
Identity = 84/213 (39.44%), Postives = 111/213 (52.11%), Query Frame = 0


Query: 33  DSQSESGVCSPTLWGSDSRMSPQFHRSRNRTLSPTSRTQAIARGQQELMEMVRNMPESSY 92
           D  S+SGVCSP LW +    SP    +  + LSP ++ Q IARGQ+ELM+MV  MPES Y
Sbjct: 22  DDHSDSGVCSPPLWRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCY 81

Query: 93  ELSLKDLVEHHLRQQESASVEKYDSTSETSFIRDPIKKRSETRALVTRSRSVNSGGFYLK 152
           ELSLKDLVE +  +++               +R   K +S+      R+  VN+ GF LK
Sbjct: 82  ELSLKDLVEVNTEEEKVFDEMPQREKKPRKVVR---KTKSDKWVDPIRNGGVNNSGFLLK 141

Query: 153 MFFPMPLG--QISTKKKSNLRSDSALNG-RSRVSPKPPQV--------DRDWW------- 212
           + FP+ LG  + + KKK N   DS++   RS +S   P +        D+DWW       
Sbjct: 142 LVFPVSLGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSES 201

Query: 213 RKRSSATSGENGGS--VSGSSSSNSNSTSSERS 226
           R+  S  S  N GS   SG SSS SNS  S  S
Sbjct: 202 RRSQSVVSRINSGSSKSSGGSSSRSNSDRSRNS 231

The following BLAST results are available for this feature:

BLAST of CmaCh04G024100 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G024100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JND4	1.8e-131	100.00	uncharacterized protein LOC111486878 OS=Cucurbita maxima OX=3661 GN=LOC111486878...	[more]
A0A6J1HEJ4	6.5e-129	97.59	uncharacterized protein LOC111462165 OS=Cucurbita moschata OX=3662 GN=LOC1114621...	[more]
A0A1S3B3A7	5.2e-94	72.69	uncharacterized protein LOC103485667 OS=Cucumis melo OX=3656 GN=LOC103485667 PE=...	[more]
A0A0A0KCW4	3.7e-92	73.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G349820 PE=4 SV=1	[more]
A0A6J1FJY2	1.7e-89	77.37	uncharacterized protein LOC111444710 OS=Cucurbita moschata OX=3662 GN=LOC1114447...	[more]

BLAST of CmaCh04G024100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989800.1	3.7e-131	100.00	uncharacterized protein LOC111486878 [Cucurbita maxima]	[more]
XP_023527832.1	7.8e-129	98.39	uncharacterized protein LOC111790927 [Cucurbita pepo subsp. pepo]	[more]
XP_022961604.1	1.3e-128	97.59	uncharacterized protein LOC111462165 [Cucurbita moschata]	[more]
KAG7032834.1	1.7e-128	98.39	hypothetical protein SDJN02_06884, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008441584.1	1.1e-93	72.69	PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo]	[more]

BLAST of CmaCh04G024100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21390.1	6.6e-25	42.01	embryo defective 2170	[more]
AT1G76980.2	4.7e-23	36.75	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G76980.1	2.3e-22	39.44	BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..66
None	No IPR available	PANTHER	PTHR34193:SF1	OS11G0199801 PROTEIN	coord: 27..246
None	No IPR available	PANTHER	PTHR34193	OS11G0199801 PROTEIN	coord: 27..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G024100.1	CmaCh04G024100.1	mRNA