CmaCh04G024010 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G024010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	wall-associated receptor kinase 3-like
Location	Cma_Chr04: 16609922 .. 16610366 (-)
RNA-Seq Expression	CmaCh04G024010
Synteny	CmaCh04G024010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAGTGGCTATGGAGTTGGAGGGGCTGCGGGCAACGAAAGGTGTGCATTCATGGGCCAATGTCAATATATACAGCGCAGAAGAGAGGGAATATTTGCTGGATGGAGCATCAGAGTCGAGCCAATTGGTTGGGAGTGGAAGTATGGGCACTATGGGGAATAGCATGAAGCTGGAAATAACACTAATGGAGCATGGTAGATGATCTTCAGTTCTATGAATTATTACCATAAATGTTTATATTGTAATTTCCTTTCATATTTAAGACTCATGTCTTAATGTGGTCCATGTGAAATTAAATTGTTGGTTGTCAATTGGGTCTCCGTCCTATGATTTTGACAATTTTAGGAGTCCCCACTGAATGTAAAAATGAAACGATTTTATATTTATCTAAAAACTCTCTTTTGGAATCTCCATTGTATATTAGAAGATTTGCTCATTAA

mRNA sequence

ATGAAGGAAGTGGCTATGGAGTTGGAGGGGCTGCGGGCAACGAAAGGTGTGCATTCATGGGCCAATGTCAATATATACAGCGCAGAAGAGAGGGAATATTTGCTGGATGGAGCATCAGAGTCGAGCCAATTGGTTGGGAGTGGAAGTATGGGCACTATGGGGAATAGCATGAAGCTGGAAATAACACTAATGGAGCATGGAGTCCCCACTGAATGTAAAAATGAAACGATTTTATATTTATCTAAAAACTCTCTTTTGGAATCTCCATTGTATATTAGAAGATTTGCTCATTAA

Coding sequence (CDS)

ATGAAGGAAGTGGCTATGGAGTTGGAGGGGCTGCGGGCAACGAAAGGTGTGCATTCATGGGCCAATGTCAATATATACAGCGCAGAAGAGAGGGAATATTTGCTGGATGGAGCATCAGAGTCGAGCCAATTGGTTGGGAGTGGAAGTATGGGCACTATGGGGAATAGCATGAAGCTGGAAATAACACTAATGGAGCATGGAGTCCCCACTGAATGTAAAAATGAAACGATTTTATATTTATCTAAAAACTCTCTTTTGGAATCTCCATTGTATATTAGAAGATTTGCTCATTAA

Protein sequence

MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLEITLMEHGVPTECKNETILYLSKNSLLESPLYIRRFAH

Homology

[Close]

BLAST of CmaCh04G024010 vs. ExPASy TrEMBL
Match: A0A6J1H6B0 (uncharacterized protein LOC111460594 OS=Cucurbita moschata OX=3662 GN=LOC111460594 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.2e-23
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 1   MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLE 60
           MKEVAMELEGLRATKG HSWANVN+ SAEE  YLLDGASESSQLVGSGS+GT+GNS+KLE
Sbjct: 672 MKEVAMELEGLRATKGEHSWANVNLSSAEETVYLLDGASESSQLVGSGSVGTVGNSIKLE 731

Query: 61  ITLMEHG--VPTECKNETILYLSKNSL 86
           ITLMEHG  V   C  +    +S  S+
Sbjct: 732 ITLMEHGRRVVQNCYRDAFTRVSNLSV 758

[Close]

BLAST of CmaCh04G024010 vs. ExPASy TrEMBL
Match: A0A6J1JL32 (putative wall-associated receptor kinase-like 16 OS=Cucurbita maxima OX=3661 GN=LOC111486859 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.1e-23
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1   MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLE 60
           MKEVAMELEGLRATKG HSWANVN+ SAEE  YLLDGASESSQLVGSGSM T+GNS+KLE
Sbjct: 670 MKEVAMELEGLRATKGEHSWANVNLSSAEETVYLLDGASESSQLVGSGSMSTVGNSIKLE 729

Query: 61  ITLMEHG 68
           ITLMEHG
Sbjct: 730 ITLMEHG 736

[Close]

BLAST of CmaCh04G024010 vs. ExPASy TrEMBL
Match: A0A6J1JGR1 (wall-associated receptor kinase 3-like OS=Cucurbita maxima OX=3661 GN=LOC111486860 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-08
Identity = 39/67 (58.21%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 1   MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLE 60
           MKEVAMELE LRATKG HSWANV           L  A ESS  V SGS+G + +SMKLE
Sbjct: 678 MKEVAMELEALRATKGEHSWANVR----------LSAAGESSPFVESGSIGAVDDSMKLE 734

Query: 61  ITLMEHG 68
           +  +EHG
Sbjct: 738 LPHVEHG 734

[Close]

BLAST of CmaCh04G024010 vs. ExPASy TrEMBL
Match: A0A6J1H8D6 (uncharacterized protein LOC111460588 OS=Cucurbita moschata OX=3662 GN=LOC111460588 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-08
Identity = 39/67 (58.21%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 1    MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLE 60
            MKEVAMELE LRATKG HSWANV           L  A ESS  V SGSMG + +S+KLE
Sbjct: 1767 MKEVAMELEALRATKGEHSWANVR----------LSAAQESSPFVESGSMGAVDDSIKLE 1823

Query: 61   ITLMEHG 68
            +  +EHG
Sbjct: 1827 LPHVEHG 1823

[Close]

BLAST of CmaCh04G024010 vs. ExPASy TrEMBL
Match: A0A6J1CJ33 (putative wall-associated receptor kinase-like 16 OS=Momordica charantia OX=3673 GN=LOC111011918 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.0e-06
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 1   MKEVAMELEGLRATKGVHSWAN-VNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKL 60
           MKEVAMELEGLR  +  HSW N  N  +AEE   LLDG  E SQ V S S+ T+G+S+K 
Sbjct: 664 MKEVAMELEGLRVLQVEHSWVNDKNSSNAEEMACLLDGDIELSQYVVSDSINTVGDSIKA 723

Query: 61  EITLMEH 67
           +I    H
Sbjct: 724 QIVSQIH 730

[Close]

BLAST of CmaCh04G024010 vs. NCBI nr
Match: XP_022959563.1 (uncharacterized protein LOC111460594 [Cucurbita moschata])

HSP 1 Score: 117.5 bits (293), Expect = 6.5e-23
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 1   MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLE 60
           MKEVAMELEGLRATKG HSWANVN+ SAEE  YLLDGASESSQLVGSGS+GT+GNS+KLE
Sbjct: 672 MKEVAMELEGLRATKGEHSWANVNLSSAEETVYLLDGASESSQLVGSGSVGTVGNSIKLE 731

Query: 61  ITLMEHG--VPTECKNETILYLSKNSL 86
           ITLMEHG  V   C  +    +S  S+
Sbjct: 732 ITLMEHGRRVVQNCYRDAFTRVSNLSV 758

[Close]

BLAST of CmaCh04G024010 vs. NCBI nr
Match: XP_023542638.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111802455 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.1 bits (292), Expect = 8.5e-23
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1   MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLE 60
           MKEVAMELEGLRATKG HSWANVN+ SAEE  YLLDGASESSQLVGSGSMGT+GNS+KLE
Sbjct: 650 MKEVAMELEGLRATKGEHSWANVNLSSAEETVYLLDGASESSQLVGSGSMGTVGNSIKLE 709

Query: 61  ITLMEHG 68
           ITL+EHG
Sbjct: 710 ITLIEHG 716

[Close]

BLAST of CmaCh04G024010 vs. NCBI nr
Match: XP_022989771.1 (putative wall-associated receptor kinase-like 16 [Cucurbita maxima])

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1   MKEVAMELEGLRATKGVHSWANVNIYSAEEREYLLDGASESSQLVGSGSMGTMGNSMKLE 60
           MKEVAMELEGLRATKG HSWANVN+ SAEE  YLLDGASESSQLVGSGSM T+GNS+KLE
Sbjct: 670 MKEVAMELEGLRATKGEHSWANVNLSSAEETVYLLDGASESSQLVGSGSMSTVGNSIKLE 729

Query: 61  ITLMEHG 68
           ITLMEHG
Sbjct: 730 ITLMEHG 736

[Close]

BLAST of CmaCh04G024010 vs. NCBI nr
Match: KAG6602138.1 (Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-09
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 27  SAEEREYLLDGASESSQLVGSGSMGTMGNSMKLEITLMEHG 68
           SAEE  YLLDGASESSQLVGSGSMGT+GNS+KLEITLMEHG
Sbjct: 225 SAEETVYLLDGASESSQLVGSGSMGTVGNSIKLEITLMEHG 265

[Close]

BLAST of CmaCh04G024010 vs. NCBI nr
Match: KAG6602139.1 (Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-08
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0


Query: 29  EEREYLLDGASESSQLVGSGSMGTMGNSMKLEITLMEHG 68
           EE  YLLDGASESSQLVGSGSMGT+GNS+KLEITLMEHG
Sbjct: 313 EETVYLLDGASESSQLVGSGSMGTVGNSIKLEITLMEHG 351

The following BLAST results are available for this feature:

BLAST of CmaCh04G024010 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G024010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6B0	3.2e-23	72.41	uncharacterized protein LOC111460594 OS=Cucurbita moschata OX=3662 GN=LOC1114605...	[more]
A0A6J1JL32	7.1e-23	88.06	putative wall-associated receptor kinase-like 16 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1JGR1	1.3e-08	58.21	wall-associated receptor kinase 3-like OS=Cucurbita maxima OX=3661 GN=LOC1114868...	[more]
A0A6J1H8D6	1.3e-08	58.21	uncharacterized protein LOC111460588 OS=Cucurbita moschata OX=3662 GN=LOC1114605...	[more]
A0A6J1CJ33	6.0e-06	53.73	putative wall-associated receptor kinase-like 16 OS=Momordica charantia OX=3673 ...	[more]

BLAST of CmaCh04G024010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959563.1	6.5e-23	72.41	uncharacterized protein LOC111460594 [Cucurbita moschata]	[more]
XP_023542638.1	8.5e-23	88.06	LOW QUALITY PROTEIN: uncharacterized protein LOC111802455 [Cucurbita pepo subsp....	[more]
XP_022989771.1	1.5e-22	88.06	putative wall-associated receptor kinase-like 16 [Cucurbita maxima]	[more]
KAG6602138.1	1.8e-09	90.24	Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6602139.1	1.6e-08	89.74	Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh04G024010 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G024010.1	CmaCh04G024010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0004674	protein serine/threonine kinase activity