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CmaCh04G023880 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGCCAGAACGGTATACGACATAACATAGACCGTCGACGCGTTGTCGAAGGAGGAACCGAAAGCCTTTGCGATAGAGCTGCTGCTTGAGAGGTATTTGCCTACCACTCTTTCGATCCATCTAGTTGTGGAGGAAATCATGATCTTGATCTAAAATTTACCGTTCTTTCGACCCCATTGAGTGGAATTTGAACTGAATTGTATCTTCCATTGGTTTTTGCTTCAGATTATCTATCTTTGCACGACTTGGATTACTGCTGATTAGTCGATTCTTATAACTAGGTTATCTTGAACTAATCGTCTACTTCCAATGAAACTGAGATGTTCATTATCCATGTTGTTTCGGATCCTCATTTTCTATGTTCCTTTTGTAATTGTTTTACATTTGAATCTCTGGATTATGCATTCTCAGTTAGTGCGAATTGTTCTTCATTTTAATCACTGATCTAGTTTTTTTTTGGCTGGTTTGTGATTTCTGTTGCTGTAATTACTCGTGGTTTGATAGTTGACTATTGGTTATGACGTTTTTGTGTTTGTGACTATTGAAGGCCATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTGTTCACTGTCATTCTTTCACTTCAAGAGATGTATAGAGGAAAACTGGCTTCTTCGGAGCTGTTTACCATACTTGGAGGTTTCATTAGTTCTCTTCTATTTCTAGTGCTTCTAACCGTGAGTTCGAACGCTCTTTTATTCTTATACCAGCTTGAAAAACTTGTAGATGCATATAATTGTGACATTTTGGACTTGGTTTTTCTGTCAAACGTAATGGAATCAGTTTTATTTTATGGATCAAAGGCAAGTTATGCTCACGTGCTGATTGTTGCATACATCCGCGTACAAGCAGAAGATTGAACTCAAGACCAAATTTGTTGCTTTCGTTACAGCATGAAGATGCAGTTTATGAGCTCAATTTATATTTAATTTATGCTTTTCAGCTGAAATTGTTGATTCAGCATGATAATTTGCATTTTCTTGATTTATTTATTTCAGTTCTTAGGGAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGGTAAGTTTAATGACTCGTGCTCTTGACTTCACATATTTTTCTGCCTAATAAGTTTCTCGAATACTAGTGCTGCAGAGTTGATATATATTTTTCATTTATTTTATATTTATCTCCAGAAAAACCTATCTGTTCTCTTTAAATGTTCATAATTATTAGGTTTAGTAGCTAATCATGACATTCTGGGGGAGGTTGACATTCATGGAAGCTACAATGTATTCTTATGATATTACTGAGTGCCTAAGTTCCAATAGTCAAATCTTTTGTGCGTTTGTATGTTGATGATTGTCGCGAGCGAGTTGAAAGAATCTGTATGGACCTATGTCTGTAGTTTTGTATTTTTTTAAAATAATTATTTGTATCTTCATCTTGGCTTTGATTATGCTATTGGTTGGATGTTTGTAAATCATGTTCTCCTTGATTCGTCAATCATACAGAAATGAAACGACAATTTCATTGTTTAAACTAGTACTCTCCCGAGTCCTGATTTTGTACAAGAGCCTACTCTTTGAAGAATGTCAAAAGATCGTAATATACGCTGTTGTAATGTCTGCCAATAGAATTCATTTGATTTAATTTGGAACTGGAAGTTGATTAAAAAGGATCTAGAAAGGTTGAAACTTTGTGGATTAAGATGCTCTTTTCGTTTATGTTATTTCATTTCAAATAAATTTTCGTTGATGGTTGTCAAGAACCTTTATGCACGCTAATTCAGTAGACTATAAATTATTATGAACAGCAGCATTGTGCCCACATTTTCCAATTTCCTTGGAGATGAATAAGAATTAACTAACCATTTACTTTTCATTTGCAGTCATTGTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGGTATTCTGACTTATCCACATCCTTTTTAAACTGTTTTTCATAGCTACTATCCCTTGGAGAAAGAATGTAGAAGGAACCACTACAAAAAATAATAAAGACATCGTAAAGTTTCAAAAGTTATCATTATAAGGCTAAAAACTGATCCTATCATGGCTTAACGTGCAAGACACGAATCGAAATAGTAATTTCATTTCAAATACTTCAGGAGAAGAGAAAGGCACCAATCCAAGACATTTGTTTCTTCAAATATTGAGATCAATAATAGCTATTATATTATGAAGTAGAACAGCAAGTTCTATAAAAACAATAAGTTCACTATTGATTGGACCAAAATTTTGAGTATCTTGGAACTCTAACTTCATAACATTATTATTTTCTTCTGCTGCAGTTTCTTGTTCTCCGCTGGATTGCTGTATGAGTTGAACAAGCTTTCAGGTGGCGCACTTTCTAAATCTGAATCTAGAGCCAAAAGGCACTGAGATGGAAAGAAACTAAGCTCTTCAGACAGCAACGGCTTTGTTTTTGAGGTTTTCTTTTTACCCCCTAGCCTCCTGCTGCTGCATCCTCTGGTGCTGAGTAGTCGTGTTTTTGTTTTGGTATTAGGAGGGGGTCGTGAGAACAGTTTATTACAATCATAACATTAACAATGGTGTTAACTCCACTGTCTTTATGCACTTTTTTATTTGGTTAATGAGAAATTGCCCGAGACTTTGTCTAGAAAACGAACACTTGAACCATCGAAATCAGCTTTTGTAACTCAAA TTGCCAGAACGGTATACGACATAACATAGACCGTCGACGCGTTGTCGAAGGAGGAACCGAAAGCCTTTGCGATAGAGCTGCTGCTTGAGAGGCCATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTGTTCACTGTCATTCTTTCACTTCAAGAGATGTATAGAGGAAAACTGGCTTCTTCGGAGCTGTTTACCATACTTGGAGGTTTCATTAGTTCTCTTCTATTTCTAGTGCTTCTAACCTTCTTAGGGAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGTCATTGTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTGTTCTCCGCTGGATTGCTGTATGAGTTGAACAAGCTTTCAGGTGGCGCACTTTCTAAATCTGAATCTAGAGCCAAAAGGCACTGAGATGGAAAGAAACTAAGCTCTTCAGACAGCAACGGCTTTGTTTTTGAGGTTTTCTTTTTACCCCCTAGCCTCCTGCTGCTGCATCCTCTGGTGCTGAGTAGTCGTGTTTTTGTTTTGGTATTAGGAGGGGGTCGTGAGAACAGTTTATTACAATCATAACATTAACAATGGTGTTAACTCCACTGTCTTTATGCACTTTTTTATTTGGTTAATGAGAAATTGCCCGAGACTTTGTCTAGAAAACGAACACTTGAACCATCGAAATCAGCTTTTGTAACTCAAA ATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTGTTCACTGTCATTCTTTCACTTCAAGAGATGTATAGAGGAAAACTGGCTTCTTCGGAGCTGTTTACCATACTTGGAGGTTTCATTAGTTCTCTTCTATTTCTAGTGCTTCTAACCTTCTTAGGGAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGTCATTGTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTGTTCTCCGCTGGATTGCTGTATGAGTTGAACAAGCTTTCAGGTGGCGCACTTTCTAAATCTGAATCTAGAGCCAAAAGGCACTGA MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFLGNFQETCGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGGALSKSESRAKRH Homology
BLAST of CmaCh04G023880 vs. ExPASy Swiss-Prot
Match: Q5Q995 (Protein KRTCAP2 homolog OS=Ixodes scapularis OX=6945 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11 Identity = 39/108 (36.11%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy Swiss-Prot
Match: A6QQ59 (Keratinocyte-associated protein 2 OS=Bos taurus OX=9913 GN=KRTCAP2 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10 Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy Swiss-Prot
Match: P86229 (Keratinocyte-associated protein 2 OS=Canis lupus familiaris OX=9615 GN=KRTCAP2 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10 Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy Swiss-Prot
Match: Q8N6L1 (Keratinocyte-associated protein 2 OS=Homo sapiens OX=9606 GN=KRTCAP2 PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10 Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy Swiss-Prot
Match: Q5RL79 (Keratinocyte-associated protein 2 OS=Mus musculus OX=10090 GN=Krtcap2 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 6.3e-10 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy TrEMBL
Match: A0A6J1JTI0 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucurbita maxima OX=3661 GN=LOC111487711 PE=3 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 6.0e-56 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy TrEMBL
Match: A0A6J1GNR1 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucurbita moschata OX=3662 GN=LOC111455605 PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.3e-55 Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy TrEMBL
Match: A0A0A0KIU0 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucumis sativus OX=3659 GN=Csa_6G381810 PE=3 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52 Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy TrEMBL
Match: A0A6J1JUA7 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucurbita maxima OX=3661 GN=LOC111489787 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.3e-52 Identity = 115/121 (95.04%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of CmaCh04G023880 vs. ExPASy TrEMBL
Match: A0A6J1FMV2 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucurbita moschata OX=3662 GN=LOC111445628 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.3e-52 Identity = 115/121 (95.04%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of CmaCh04G023880 vs. NCBI nr
Match: XP_022990979.1 (protein KRTCAP2 homolog [Cucurbita maxima] >XP_022990980.1 protein KRTCAP2 homolog [Cucurbita maxima] >XP_023552950.1 protein KRTCAP2 homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552956.1 protein KRTCAP2 homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552963.1 protein KRTCAP2 homolog isoform X2 [Cucurbita pepo subsp. pepo] >XP_023552970.1 protein KRTCAP2 homolog isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CmaCh04G023880 vs. NCBI nr
Match: XP_022953105.1 (protein KRTCAP2 homolog [Cucurbita moschata] >XP_022953114.1 protein KRTCAP2 homolog [Cucurbita moschata]) HSP 1 Score: 224.6 bits (571), Expect = 4.7e-55 Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of CmaCh04G023880 vs. NCBI nr
Match: KAG6602123.1 (hypothetical protein SDJN03_07356, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032821.1 hypothetical protein SDJN02_06871 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 224.2 bits (570), Expect = 6.2e-55 Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of CmaCh04G023880 vs. NCBI nr
Match: XP_038884115.1 (protein KRTCAP2 homolog [Benincasa hispida]) HSP 1 Score: 220.3 bits (560), Expect = 8.9e-54 Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of CmaCh04G023880 vs. NCBI nr
Match: XP_004149432.1 (protein KRTCAP2 homolog [Cucumis sativus] >XP_031742452.1 protein KRTCAP2 homolog [Cucumis sativus] >KGN47691.1 hypothetical protein Csa_018286 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52 Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of CmaCh04G023880 vs. TAIR 10
Match: AT1G77350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function KRTCAP2 (InterPro:IPR018614); Has 141 Blast hits to 141 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 177.6 bits (449), Expect = 6.2e-45 Identity = 94/122 (77.05%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of CmaCh04G023880 vs. TAIR 10
Match: AT1G77350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function KRTCAP2 (InterPro:IPR018614); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 177.6 bits (449), Expect = 6.2e-45 Identity = 94/122 (77.05%), Postives = 111/122 (90.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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