CmaCh04G022860 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G022860
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionEukaryotic translation initiation factor 3 subunit J
LocationCma_Chr04: 15947676 .. 15954069 (-)
RNA-Seq ExpressionCmaCh04G022860
SyntenyCmaCh04G022860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGACTGGGGTAATGCTATATGGTTATGTTTTAGTCCATCATTGTTCACCTTTGCTGATTGAATAAGTAACAAGTCTCTATACAAAAAATGTTGTATATGGATATATGTTGGTCATTCGATCAATAATTTACCTCTGATTATTATTATTATCATCATCATCATTATATATTATATGTAGCCTATTATTAGTACATAAAATAACACAACACTTGAAAACGAGTATGGAATGGATGAGAATAAGCTTAATAGTGCAGGACTTAAGTACGACAAGGACACTACAAATAAATAATAAAAGGATGTATGTGTATGTTCTAAAGCTTCCTATTAAACACTTGTTGTGGTTTGAGAGACTGTAGATAGAGGTGCAAGAGTTCATATTTTATTAGCAAAGGAGCCGAGGAATAGATCTAATTTTGAGTTCAACTTCAAAGGAGTAAAAGTTACAGGACAAGACAATCCATAGTTGTGGGTGTCATGTTTTGAAGTTAGGTCTTGGTCATTGCAAAAACACTTGGCTGAACAGATGTAAATGCTTTCAAACATCACGTATCATTACTTTATCAGTTCTTATTGTTCTATATGCCCGAACACATCTGGAGTTCAAGAAATAGTCATCTTAATGAAAATAAAATCAGTACATTTTTTAGATGTGTTCATTTTGCATTAGTGCCTGATTTTATAACTCCATTCAATATGGTGTGCTTCTTTCTGAAGGGATATGCATGCGTAATTTCTTTAATTAAAGAGTGCTTCGTATTCATCTCCATTGTATTCTGTTGATATTGTATTTTTTGGTTGCTAAGGTTGTTAAAATTTGTAGTATTGTATTTTCTTGTCTTGTAGTATCTCAAATGACTCTGCTTCCCAAAACATGATAAATGAATTGTCCTATTGCTATGTTTTTATTCTTATCTTTTTTAATAAACACAAAATTTCATTAAACTTATTTCATCTTCTTTTTATTTTATTTTTTTATTTGTTTAATACTTTGGATGGGAGGCAATTATTGTGCCTTCCTTTCAAGTAGCTTGGTTGACAGTATGGAAGAATATTGTGGTGGTTCTGCTATAATGATCAAATCTACTCAGTTTGAGCGAGAGTGAGAGAAGTGTGGAGCTAACCACTGTCATGTGGCAAAGGATAAGGAGAGTTGCGATTAGTTTTTTGACGAACTATATATCCTTACCACTTCTCTCCACCGGTGATTTAATTGAATATCTTTAAAGATTAAAAATAAGAATCGAGTCCCTTTATATGTAACCTATTTGGAAATTTTAGTCATTATGTCATACAAATAATACTATGTTGTGTACAGTATATGGTAAATATCAAGTAAAAAATTATCGAACTACAGTCTAGCAAACATGTTTAATGTTAAATTACAAATTGGATCCCTATGGTATTAAATGTTAGAATCAGTCCCTATGAGAGTTTTATCAAACCATAAGGACTAAATTCCAACTCAAATACCATAGGGATCGAGTTTGCAATATAACCGATGTATAATATGATTTTTGAGGACAAGACATGGTGTTGGTTATTCTGTGGAAAGAAGTTCTCTATTCTTAACGTAGCCCGTTGTGTCTCATGACTTGTTATAATCTTCCATGATATTGGAAAATATTTTACAGTTTAATTAGCTGTTCTGCTCAGGCATTGAATAACTTTTTCTTAGCTTGAGAATGGAGATACCTATAGCAAATTTAGCTTTCTTTCTTGAGTTTCTAACTTTGTTTATCTGATAGTTGAGGCATAAAAGCTTACATATGGTATAGTCATATGTAGTTCCATATTTATTCTTTCTCTTAATTTTGTGACTCCAAGTTTAATCATCTAGGTGGTTTTGCTTACGTATGTATATGTTCTCTTTTAGAGGATGAAAACATAACCCCACTCCAGAAGGAGCAGCCAAAGAATAAATGGGATGATGAGGATGTGGATGACGATGATGTGAAGGAATCTTGGGAGGATGATGATGAACCTGCACCGGTGAGAATTTATTGATTTTCTTGCTAATGATGTTTGTTTCATTTAGTATTGATGTTAAGACTGAAGATAATGCCGAAGGAGAATTTGGGTGATTCTTAATGATCACTACAGACTGCTAAGGGTCTAAACCACTCCAATGTTTTAAATATTGTGGTGAATTGTTCATTCTAAGGGTAGAAATCATTAATAGTTGTAGGAAGCTTTTTTAATATTCCTAAAACTGGCGGAAATGGAAGTCCCTTTTCCTTTATTTTGAAATTTTGTGGAGCTCATGTAGAAACTACATTTTGTTAAGGTTGGGGTTGGCATCAGTACATGGTTTTGAGAAGATGAATGGTTCAGAGCATGTAAAATCTAATAAAATCTCTAATTCTTTAGCTTGAGTAACTCGTCCATTGCCTGATGTATCTGTAAATTTGTTACCCCATTTCTTCTTTTGTCTTTTTGGTCTCACAGGCTCCAGTAGTTAAACCTCCTCCAGAAGCCGCCTCAAAGAAACCTGCCGCAAAAACCATTGAAAAAAAAGGAAAAACTTCCGAGGTGGAACCTGAACAGCCTCTAGATCCATTAGCTGAGAAACTTCGCCAACAAAGGTAATATTAGTTTGCTTTGGTTTTTTTGGAACTCTTAGCTCAACTTATATCTACTTATGGTTCTCTGGAAGGAAAATAATTGAAGCAGGAATTTGAACTTAAAACATTTTATGAATTATTTTATTGTGACGGGAGAATGATCCTTCCTACCAATGTTGTGTAGACAAAGTAGGACATTGGAGTAACTATTTTGAATTTTCTTTTTATGCTATCTTGTCCATTCCAGATCTCTTTTTGTCGCAGAATTATCTTACTCATTACTTCTCTTCTGAAAGCAGGCACCATTCCTGTTAACAATAAATGAGAAAAAGCATTCTATTTGTCTACATTTTGTGCAAGTGTTATCAAACAGAACTAGATGACTGGTTTAATAATTATTGGCCCTTTTTTTAAAGCATAAATAATGGTCCAATACTTGGGACTTCTCATTGAATATAAATCTTTGAATTATGAATGTTATGCTCTTCACGATCTAGGTTGATTATGAGCGTTTGGTTTACTTCATACTGATTTAGGAAAAGTTATAAAGAACTGAGAGATTTCTTATGGAAGAAGTTGCATTTGGTGTGATGAGGTTGGTATAGGATTGGAAATTTGGGTTGTGAAAATATTGCCCACTTTTGTATATGCTTTTATGGTAGTTTCCCTTTGAAACTTAAGACTCGGTGGTACCAAGTAATTACAAGGGCACATTTGTTTACTTAATTTTTGGATAGGGATCCACTCCTATGGTTGGATTTGTATCAGGGAAACCCATAGGTGGTATCTAATTGTCTTTTGGTTTTCTTGTTTCTTATTATGTCTTTTGAGCAAGATGGTTCTAGAGTTCCTTTTTGGTGTATGTTTGGCCTAAATCGAACCTACCATTTCCCTTTTGTATTCTATAGCCATTTCAAAAAATGCCTTGTGAGGAGTCACCTCGCTTTGCTATATGTTTATGTCGATTCTTTCTCGGTCTTGACATTTGCAAGTTAGCTTTGTTCCTTCATATAATCCAAAATGTTGGGCATCTTTTAAGTGCAATGTGGCCTATATTGCCCCTTTTGGAACCTATACTAGCCTTTGTGCTATTAAGGAGTTAGGAGGAAGTCTGTTAACTGTGGACTATGAGATTGAGGACAATTCTTCGTTATTTCGCTCTATATGAGTCGTTAGTTGGTCCTTACTTGCATGTGGAGGATGGATTGCAGACGCCCTTATCCTTGGAGAAGGTTAAAAGGGTGGTTTTTGGTTAGTTAGAAACTCAACCCAGGTTTGGGTGGTTTTTCTTAGGCTTCTTCCAAGACAATTGGGAGATAGGAAGGATATTTGGAAATTCGTTAGCAAATTCTACTTCAACAAAACCTTTGTTGCCTTATCCTTATTACCTGTGTGTATAAGATTATCACCAAGATCCTTGCTAAAAAGTGTAATCTTATATCCAAGATCCTTGCTAACAAGCTTACAAAGGTCCCCGCCTCAATGATCTCCCACATTAGAGGGTCTTTCTTGCTGGCGGGTAAATCTTAGAACAGGGCAGTGAGGATTATAGGGCTCAAAAGAAAGGTCATCTTTAAGATTGACCAGGAGAAAGCCTACCATCACCTAGATTTGGTCTTTTTAGATAAGGTGATGGAGACTAAGGGTGTAACAACCCGATTTTTGATGAATCACAGGTTTTCACATACATGAAGGTAAGAACGGCGGAAAAATCTTCTTTTGTAGAACGGGAGACAAGGAATTTAAAATTCAAATATGCATTCAAAACTGACATAAAAGAAATTTGAAGGTGATACCCGCTGAGGCAAGTCAAAAAATGTCAAGGAAGACGACTTGATCTGAAGGGCATTTTCTGCAGCTGCGCGGTCTACACTCCTTTTGAGAAAAAATAAAATAACATGGAACGAGATAAATACTCAATAAACAACCTACTTGTAGGCTTTTGTCGTACTTATATTTATAACATATACTTAGGCAATGTGTTCAACTATAATCCTTGGCCAATAACTTGGCTCTTGTCTATTCTTGTTGTATAAGGCTTATGCATACATTCTTCTATTCACTTCTACTCTAGGAGTGTATACTTATTAGGCTCTAAGGTAAGCTTTAGTTTACTTGGCCCTTGTAACAAGCTTTAAGTACAAGACCCTTACATTGGACTTTGAGATACATTGTCCTTATGATGACTTTGAAATATGTGGCCCTTATGAAGGGCTCTAAATTACCTGGCCCTTATGACGGTCTCTAAGATACGTGGACTTCATGACAGGCTCTGAGACATGACCCTCATGACAGGCTCTGAGATTTAACCTAAGCCCTTTCCATGGGGTATGTGCTATTTTGTGGGGGAAAGAAACAACAAAATCATTAGAGGGCACTAGAGTTCCTTCAGCGATGTTTGGTTCCTTGTTATATTTTTTGTTTCTCTTTGAGCCTATATTTTTAGTCTCTTTTTTAATTATTTACTTGGTTTTATTTGTCTTGACGGGAAGCCCTTTTTTTCGTAGTGTGGCTCCTTTTTGTGGGCTTTTTCTTTTCTAGATGCTCGTATATTCTTTCATTTTTTTCTCATTGAAGTACGTTTTTCTGTTAAAAAAATACAAAGAGCTTCTATTTGTCTTTGGCTGGAACTAGTGGTATGCTTTATATAAGATCTTAATCACGTGCTGGGGCTTTGTTTTTTTGTTTCCAAATTGTGGCTGGCAGGTTAGTGGAAGAAGCAGATTATAAGTCCACTACCGATTTGTTTAAAAAGAGTGGTGATGAGAAGACTCTTGATAATTTCATTCCAAAATCAGATAGTGACTTCTTGGAATATGCAGAGCTGATCTCTCATAAACTTCGCCCCTATGAGGTTTATACAATTTACCTTTATCATTATTTCTGCCCATCAATGTGCTTATTCTCACGAGTTTCCCCCAAAAAATTATTGTTGCAGAAAAGTTTTCATTATATTAATCTGCTCAAAGATGTCATTAGACTGTCGATGACTTCTTTGAAAGCAGCGGATGCGAAAGAAGTTGCCTCTTCTGTCACTGCACTTGCCAATGAAAGACTAAAGGCGGAGAAGGATACCAGTAAAAAGAAAACGGGTAGGTGTTTACTACATTTATAATCCCCTTATCACTGCACTTTTTTTTTTTTTTTTTTTTTCCTGAACTATTTCAATCCTACCAGACCAAATGAATGTGATGTTTGTGTATTTGAACTGTTTCATTTTTCCCTCTTGTGTGGAACTTCTGCAGCTGTGAAGAAGAAGCAGCTTCATGTTGAAAAGGCAGTTGATGACATGATTGTCAATTCATTTGATGATATCGACGAGTACGACTTCATGTAATTGTCCCATTTGAGCATTCTAGCCCGAGTGTCATCAGTTTTTGTCCTGTGAATGGAGGTCAGATTCTTCGGCATATTTCTCCCCTTTAATACAACAATAGATTGGTTCCCGAGTGTCGTGTCTAAATAAGGTTAATGTATTAGACTTGTGTATGACATATCATATCATTATAAATTTTGCTCTTTTATTTATTTATTTTTTTTGTTTGATAGAGATTGTTCAAATCGCCTTTGAGAATGTACAAGATTGCGTAGTCATTTCAAACTCAGATTGTCAAATTGTGTATGTTGTGACGATGCTTCCTTCTACCTGAATTACATTTTCTTGCAAAAGGTCGTAAAATTTAAGGTTTTGTTGGGGAACGATCGAGAGCCAAGAACGAACTTTCAGCTAATTCCACATTGAATCCCACAATTTATTCTTGCTGAATATGAAATCGGACTTTTTAGATAACATTTCTGTGTTGAACTCAATAAATAAATAAAATCTCG

mRNA sequence

ATGGATGACTGGGAGGATGAAAACATAACCCCACTCCAGAAGGAGCAGCCAAAGAATAAATGGGATGATGAGGATGTGGATGACGATGATGTGAAGGAATCTTGGGAGGATGATGATGAACCTGCACCGGCTCCAGTAGTTAAACCTCCTCCAGAAGCCGCCTCAAAGAAACCTGCCGCAAAAACCATTGAAAAAAAAGGAAAAACTTCCGAGGTGGAACCTGAACAGCCTCTAGATCCATTAGCTGAGAAACTTCGCCAACAAAGGTTAGTGGAAGAAGCAGATTATAAGTCCACTACCGATTTGTTTAAAAAGAGTGGTGATGAGAAGACTCTTGATAATTTCATTCCAAAATCAGATAGTGACTTCTTGGAATATGCAGAGCTGATCTCTCATAAACTTCGCCCCTATGAGAAAAGTTTTCATTATATTAATCTGCTCAAAGATGTCATTAGACTGTCGATGACTTCTTTGAAAGCAGCGGATGCGAAAGAAGTTGCCTCTTCTGTCACTGCACTTGCCAATGAAAGACTAAAGGCGGAGAAGGATACCAGTAAAAAGAAAACGGCTGTGAAGAAGAAGCAGCTTCATGTTGAAAAGGCAGTTGATGACATGATTGTCAATTCATTTGATGATATCGACGAGTACGACTTCATGTAATTGTCCCATTTGAGCATTCTAGCCCGAGTGTCATCAGTTTTTGTCCTGTGAATGGAGGTCAGATTCTTCGGCATATTTCTCCCCTTTAATACAACAATAGATTGGTTCCCGAGTGTCGTGTCTAAATAAGGTTAATGTATTAGACTTGTGTATGACATATCATATCATTATAAATTTTGCTCTTTTATTTATTTATTTTTTTTGTTTGATAGAGATTGTTCAAATCGCCTTTGAGAATGTACAAGATTGCGTAGTCATTTCAAACTCAGATTGTCAAATTGTGTATGTTGTGACGATGCTTCCTTCTACCTGAATTACATTTTCTTGCAAAAGGTCGTAAAATTTAAGGTTTTGTTGGGGAACGATCGAGAGCCAAGAACGAACTTTCAGCTAATTCCACATTGAATCCCACAATTTATTCTTGCTGAATATGAAATCGGACTTTTTAGATAACATTTCTGTGTTGAACTCAATAAATAAATAAAATCTCG

Coding sequence (CDS)

ATGGATGACTGGGAGGATGAAAACATAACCCCACTCCAGAAGGAGCAGCCAAAGAATAAATGGGATGATGAGGATGTGGATGACGATGATGTGAAGGAATCTTGGGAGGATGATGATGAACCTGCACCGGCTCCAGTAGTTAAACCTCCTCCAGAAGCCGCCTCAAAGAAACCTGCCGCAAAAACCATTGAAAAAAAAGGAAAAACTTCCGAGGTGGAACCTGAACAGCCTCTAGATCCATTAGCTGAGAAACTTCGCCAACAAAGGTTAGTGGAAGAAGCAGATTATAAGTCCACTACCGATTTGTTTAAAAAGAGTGGTGATGAGAAGACTCTTGATAATTTCATTCCAAAATCAGATAGTGACTTCTTGGAATATGCAGAGCTGATCTCTCATAAACTTCGCCCCTATGAGAAAAGTTTTCATTATATTAATCTGCTCAAAGATGTCATTAGACTGTCGATGACTTCTTTGAAAGCAGCGGATGCGAAAGAAGTTGCCTCTTCTGTCACTGCACTTGCCAATGAAAGACTAAAGGCGGAGAAGGATACCAGTAAAAAGAAAACGGCTGTGAAGAAGAAGCAGCTTCATGTTGAAAAGGCAGTTGATGACATGATTGTCAATTCATTTGATGATATCGACGAGTACGACTTCATGTAA

Protein sequence

MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAAKTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKAEKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Homology
[Close]
BLAST of CmaCh04G022860 vs. ExPASy Swiss-Prot
Match: B4LN42 (Eukaryotic translation initiation factor 3 subunit J OS=Drosophila virilis OX=7244 GN=eIF3j PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.3e-17
Identity = 82/229 (35.81%), Postives = 120/229 (52.40%), Query Frame = 0 

Query: 2   DDWE----DENITPLQKEQPKNKWDDEDVDDDDVKESWEDD----DEPAPAPVVKPPPEA 61
           DDWE     E +         NKW+ ED DD+DVKESWED+    DE  P     P    
Sbjct: 3   DDWESAADSEIVIRPNATNNINKWEGED-DDEDVKESWEDEEEKKDEEKPTKTEAPVKTK 62

Query: 62  ASKKPAAKTIEKKGKTSEVEPEQPL------DPLAEKLRQQRLVEEADYKSTTDLFKKSG 121
            +K   AK +E++ + +E E  + L      + LAEKLR Q++ EE+D KS  D F  + 
Sbjct: 63  PNKALKAK-LEEQERLNEEEERKRLANMTAEEKLAEKLRLQKIQEESDLKSALDTFGVTS 122

Query: 122 DEKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVA 181
               LD F P+S  +F E+   +S K+  Y +S H+   ++D++R    +L AAD K+V 
Sbjct: 123 IGGGLDAFNPQSKEEFKEFGATLSWKVAQYRESVHFPEFIEDLVRSLCVNLSAADIKKVK 182

Query: 182 SSVTALANERLKAEKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEY 217
            SV +L +E+ K EK  +KK  A  K ++ + K  DD+     DD  +Y
Sbjct: 183 MSVESLHSEKQKMEKANAKKSAAKAKGKVSLRKESDDI-----DDYQKY 224

[Close]
BLAST of CmaCh04G022860 vs. ExPASy Swiss-Prot
Match: B4KTH6 (Eukaryotic translation initiation factor 3 subunit J OS=Drosophila mojavensis OX=7230 GN=eIF3j PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.8e-16
Identity = 84/236 (35.59%), Postives = 120/236 (50.85%), Query Frame = 0 

Query: 2   DDWE----DENITPLQKEQPKNKWDDEDVDDDDVKESWEDD----DEPAPAPVVKPPPEA 61
           DDWE     E +         NKW+ ED DD+DVKESWED+    DE  P     P    
Sbjct: 3   DDWESAADSEIVIRPNAANNINKWEGED-DDEDVKESWEDEEEKKDEEKPTKTEAPVKTK 62

Query: 62  ASKKPAAKTIEKKGKTSEVEPEQ-----PLDPLAEKLRQQRLVEEADYKSTTDLFKKSGD 121
            +K   AK  E++    E E ++     P + LAEKLR Q++ EE+D KS  + F  +  
Sbjct: 63  PNKALKAKLEEQERLKEEEEQKRLAEMTPEEKLAEKLRLQKIQEESDLKSALETFGVTSI 122

Query: 122 EKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVAS 181
              LD F P+S  +F E+   +S K+  Y +S H+   ++D++R    +L AAD K+V  
Sbjct: 123 GGGLDAFNPESKEEFKEFGATLSWKVAQYRESIHFPQFIEDLVRSLCCNLSAADIKKVKM 182

Query: 182 SVTALANERLKAEKDTSKKKTAVKKKQLHVEKAVDDM-----IVNSFDDIDEYDFM 220
           SV +L +E+LK EK  +KK     K ++ +    DD+       N F D D  DFM
Sbjct: 183 SVESLHSEKLKMEKAAAKKSAMKGKGKVSLRTENDDIDGYQKYGNDFTD-DYDDFM 236

[Close]
BLAST of CmaCh04G022860 vs. ExPASy Swiss-Prot
Match: B4J4E7 (Eukaryotic translation initiation factor 3 subunit J OS=Drosophila grimshawi OX=7222 GN=eIF3j PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.2e-16
Identity = 81/233 (34.76%), Postives = 121/233 (51.93%), Query Frame = 0 

Query: 2   DDWE----DENITPLQKEQPKNKWDDEDVDDDDVKESWEDD----DEPAPAPVVKPPPEA 61
           DDWE     + +         NKW+ ED DD+DVKESWED+    DE  P     P    
Sbjct: 3   DDWEFAADSKVVVKPNAANNINKWEGED-DDEDVKESWEDEEEKKDEEKPTKTEAPAKTK 62

Query: 62  ASKKPAAKTIEKKGKTSEVEPEQ-----PLDPLAEKLRQQRLVEEADYKSTTDLFKKSGD 121
            +K   AK +E++    E E ++       + LAEKLR Q++ EE+D KS  + F  +  
Sbjct: 63  PNKVLKAKLLEQECLEKEEEAKRLANMSTEEKLAEKLRLQKIQEESDLKSALETFGLTSI 122

Query: 122 EKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVAS 181
           +  LD+F P+S+ +F E+   +S K+  Y++S H+   ++D+++    +L  AD K+V  
Sbjct: 123 DGGLDSFNPQSNEEFKEFGATLSWKIAQYKESPHFPQFIEDLVQALCVNLSTADLKKVKM 182

Query: 182 SVTALANERLKAEKDTSKKKTAVK---KKQLHVEKAVDDMIVNSFDDI-DEYD 218
           SV  L +E+LK EK + K K A K   K  L  E    D+     DD  D+YD
Sbjct: 183 SVEVLHSEKLKMEKVSVKNKGAAKNRGKATLRTENDDIDVYQKYGDDFTDDYD 234

[Close]
BLAST of CmaCh04G022860 vs. ExPASy Swiss-Prot
Match: A7RSH7 (Eukaryotic translation initiation factor 3 subunit J OS=Nematostella vectensis OX=45351 GN=v1g240395 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 84/245 (34.29%), Postives = 127/245 (51.84%), Query Frame = 0 

Query: 1   MDDWEDENITP--LQKEQPKNKWDDEDVDDDDVKESWEDDDE-----------PAPAPVV 60
           M DW+DE   P  +  +   +KW+ ED +DDD+KESW+DDDE            A AP  
Sbjct: 1   MADWDDEKFEPGEVPADGVTDKWEGED-EDDDIKESWDDDDEDEKKEDEAKNTEAAAPKK 60

Query: 61  KPP-PEAASKKPAAKTIEKKGKTSE---VEPEQ----PLDPLAEKLRQQRLVEEADYKST 120
           K    +   +K   K +E+K K  E   +E E     P + +AEKLR+Q++VEE+D    
Sbjct: 61  KKTLKQILKEKEEQKLLEEKRKAEEKQKLEEEDKELTPEEQMAEKLRRQKIVEESDLLVA 120

Query: 121 TDLFKKSGDEKT----LDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSM 180
            D F     E+     LD+ IP +  +F EY++L+  KL  +E +  YI  L+  +R   
Sbjct: 121 MDTFGVGTQEEASRTGLDSMIPSTKEEFTEYSKLLVEKLTKFETNPEYIPFLEATLREIC 180

Query: 181 TSLKAADAKEVASSVTALANERLKAEKDTSKKKTAVKKKQL--HVEKAVDDMIVNSFDDI 218
            SL   D K+++S++  L +E+LKA+K    K  A KK  L    +    D +  S+ D+
Sbjct: 181 VSLDPEDIKKLSSTLNMLQSEKLKAQKGKKAKSKATKKATLTGGAKMGRKDEMDYSYGDL 240

[Close]
BLAST of CmaCh04G022860 vs. ExPASy Swiss-Prot
Match: Q0VCU8 (Eukaryotic translation initiation factor 3 subunit J OS=Bos taurus OX=9913 GN=EIF3J PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.5e-14
Identity = 66/192 (34.38%), Postives = 107/192 (55.73%), Query Frame = 0 

Query: 19  NKWDDEDVDDDDVKESW-EDDDEPAPAPVVKPPPEAASKKPAAKTIEKKGKTSE------ 78
           ++W+ ED +D+DVK++W +DDDE      VKP  + + KK  A+ I++K +  +      
Sbjct: 35  DRWEGED-EDEDVKDNWDDDDDEKKEEAEVKPEVKISEKKKIAEKIKEKERQQKKRQEEI 94

Query: 79  ----VEPEQPL-----DPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSDSD 138
                EPE+P      + LA+KLR ++L EE+D +   + F  +     +D   P S  D
Sbjct: 95  KKRLEEPEEPKVLTPEEQLADKLRLKKLQEESDLELAKETFGVNNTVYGIDAMNPSSRDD 154

Query: 139 FLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKAEK 195
           F E+ +L+  K+  YEKS +Y N L+ ++R    SL+  D K++ +S+T L +E+ K EK
Sbjct: 155 FTEFGKLLKDKITQYEKSLYYANFLEALVRDVCISLEIDDLKKITNSLTVLCSEKQKQEK 214

[Close]
BLAST of CmaCh04G022860 vs. ExPASy TrEMBL
Match: A0A6J1JVF0 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661 GN=LOC111487853 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 219

[Close]
BLAST of CmaCh04G022860 vs. ExPASy TrEMBL
Match: A0A6J1HJG3 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=3662 GN=LOC111464109 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 217/219 (99.09%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 219

[Close]
BLAST of CmaCh04G022860 vs. ExPASy TrEMBL
Match: A0A6J1JS59 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661 GN=LOC111487853 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKT VKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKT-VKKKQLHVEKAVDDMIVNSFDDIDEYDFM 218

[Close]
BLAST of CmaCh04G022860 vs. ExPASy TrEMBL
Match: A0A6J1HHK4 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=3662 GN=LOC111464109 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.4e-108
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKT VKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKT-VKKKQLHVEKAVDDMIVNSFDDIDEYDFM 218

[Close]
BLAST of CmaCh04G022860 vs. ExPASy TrEMBL
Match: A0A6J1K212 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661 GN=LOC111489417 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94
Identity = 192/221 (86.88%), Postives = 204/221 (92.31%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENI PLQKEQPKNKWDDEDVDD+DVKESWED+DEPAP PVVKPPPE A KKPAA
Sbjct: 1   MDDWEDENIPPLQKEQPKNKWDDEDVDDNDVKESWEDEDEPAPVPVVKPPPETAPKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KT EKK KT  VEP+QPLDPLAEKLRQQRLVEEADYKSTT+LF K GDEKTLDNFIPKS+
Sbjct: 61  KTTEKKAKTVVVEPKQPLDPLAEKLRQQRLVEEADYKSTTELFGKRGDEKTLDNFIPKSE 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKD +RLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDAMRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTS--KKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EK+ +  KKKTAVKKKQLHVEKA DDMI N++D ID+YDFM
Sbjct: 181 EKEANAGKKKTAVKKKQLHVEKADDDMIANTYDAIDDYDFM 221

[Close]
BLAST of CmaCh04G022860 vs. NCBI nr
Match: XP_022991178.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 5.5e-110
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 219

[Close]
BLAST of CmaCh04G022860 vs. NCBI nr
Match: XP_022963973.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita moschata] >KAG7032718.1 Eukaryotic translation initiation factor 3 subunit J [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109
Identity = 217/219 (99.09%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 219

[Close]
BLAST of CmaCh04G022860 vs. NCBI nr
Match: XP_023551688.1 (eukaryotic translation initiation factor 3 subunit J-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAA KKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAAPKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 219

[Close]
BLAST of CmaCh04G022860 vs. NCBI nr
Match: XP_022991180.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 401.7 bits (1031), Expect = 3.9e-108
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKT VKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKT-VKKKQLHVEKAVDDMIVNSFDDIDEYDFM 218

[Close]
BLAST of CmaCh04G022860 vs. NCBI nr
Match: XP_022963981.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           EKDTSKKKT VKKKQLHVEKAVDDMIVNSFDDIDEYDFM
Sbjct: 181 EKDTSKKKT-VKKKQLHVEKAVDDMIVNSFDDIDEYDFM 218

[Close]
BLAST of CmaCh04G022860 vs. TAIR 10
Match: AT1G66070.1 (Translation initiation factor eIF3 subunit )

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-66
Identity = 140/226 (61.95%), Postives = 179/226 (79.20%), Query Frame = 0 

Query: 1   MDDWEDENITPL-QKEQPKNKWDDEDVDDDDVKESWE-DDDEPAPAPVVKPPPEAASKKP 60
           MDDWEDE I PL  K + K+ WDDEDVD++++K+SWE DDDEPA  PV+ P PE A KK 
Sbjct: 1   MDDWEDEKIAPLPAKVELKSNWDDEDVDENEIKDSWEDDDDEPAQPPVINPAPEKAPKKA 60

Query: 61  AAKTIEKKGKTSEV----EPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDN 120
           A KT+EKKGK  EV      E+PLDP+AEKLRQQRLVEEADY++T +LF    D+K LD 
Sbjct: 61  APKTVEKKGKAVEVPKEAPKEKPLDPIAEKLRQQRLVEEADYRATAELFGVKDDDKNLDM 120

Query: 121 FIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALA 180
           FIPKS+SDFLEYAE+ISH+++PYEKS+HYI LLK ++RLS+T++KAAD K+VASS+T +A
Sbjct: 121 FIPKSESDFLEYAEMISHRIKPYEKSYHYIALLKTIMRLSLTNMKAADVKDVASSITTIA 180

Query: 181 NERLKAEKDTSK-KKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           NE+LKAEK+ +  KK   KKKQL V+KA DD++   +D +D++DFM
Sbjct: 181 NEKLKAEKEAAAGKKKGGKKKQLIVDKANDDLVAGPYDAMDDFDFM 226

[Close]
BLAST of CmaCh04G022860 vs. TAIR 10
Match: AT1G66070.2 (Translation initiation factor eIF3 subunit )

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-66
Identity = 140/226 (61.95%), Postives = 179/226 (79.20%), Query Frame = 0 

Query: 1   MDDWEDENITPL-QKEQPKNKWDDEDVDDDDVKESWE-DDDEPAPAPVVKPPPEAASKKP 60
           MDDWEDE I PL  K + K+ WDDEDVD++++K+SWE DDDEPA  PV+ P PE A KK 
Sbjct: 1   MDDWEDEKIAPLPAKVELKSNWDDEDVDENEIKDSWEDDDDEPAQPPVINPAPEKAPKKA 60

Query: 61  AAKTIEKKGKTSEV----EPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDN 120
           A KT+EKKGK  EV      E+PLDP+AEKLRQQRLVEEADY++T +LF    D+K LD 
Sbjct: 61  APKTVEKKGKAVEVPKEAPKEKPLDPIAEKLRQQRLVEEADYRATAELFGVKDDDKNLDM 120

Query: 121 FIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALA 180
           FIPKS+SDFLEYAE+ISH+++PYEKS+HYI LLK ++RLS+T++KAAD K+VASS+T +A
Sbjct: 121 FIPKSESDFLEYAEMISHRIKPYEKSYHYIALLKTIMRLSLTNMKAADVKDVASSITTIA 180

Query: 181 NERLKAEKDTSK-KKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           NE+LKAEK+ +  KK   KKKQL V+KA DD++   +D +D++DFM
Sbjct: 181 NEKLKAEKEAAAGKKKGGKKKQLIVDKANDDLVAGPYDAMDDFDFM 226

[Close]
BLAST of CmaCh04G022860 vs. TAIR 10
Match: AT5G37475.1 (Translation initiation factor eIF3 subunit )

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-61
Identity = 134/225 (59.56%), Postives = 173/225 (76.89%), Query Frame = 0 

Query: 1   MDDWEDENITPL-QKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPA 60
           MDDWE E+  PL  K + K+ WDDEDVD++D+K+SWE++D  AP P+VKP  E A KKPA
Sbjct: 1   MDDWEAEDFQPLPSKVELKSNWDDEDVDENDIKDSWEEEDVSAPPPIVKPASEKAPKKPA 60

Query: 61  AKTIEKKGKTSE----VEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNF 120
            K +EKK KT E       E+PLDP+AEKLR QRLVEEADY+ST +LF    +EK++D  
Sbjct: 61  VKAVEKKVKTVEAPKGTSREEPLDPIAEKLRMQRLVEEADYQSTAELFGVKTEEKSVDML 120

Query: 121 IPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALAN 180
           IPKS+SDFL+YAELIS +L P+EKSFHYI LLK V+RLS+ ++KAAD K+VASS+TA+AN
Sbjct: 121 IPKSESDFLDYAELISQRLVPFEKSFHYIGLLKAVMRLSVANMKAADVKDVASSITAIAN 180

Query: 181 ERLKAEKDTSK-KKTAVKKKQLHVEKAVDDMIVNSFDDIDEYDFM 220
           E+LKAEK+ +  KK + KKKQLHV+K  DD++   +D +D+ DFM
Sbjct: 181 EKLKAEKEAAAGKKKSGKKKQLHVDKPDDDLVSGPYDAMDDDDFM 225

The following BLAST results are available for this feature:
BLAST of CmaCh04G022860 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B4LN424.3e-1735.81Eukaryotic translation initiation factor 3 subunit J OS=Drosophila virilis OX=72... [more]
B4KTH62.8e-1635.59Eukaryotic translation initiation factor 3 subunit J OS=Drosophila mojavensis OX... [more]
B4J4E76.2e-1634.76Eukaryotic translation initiation factor 3 subunit J OS=Drosophila grimshawi OX=... [more]
A7RSH71.8e-1534.29Eukaryotic translation initiation factor 3 subunit J OS=Nematostella vectensis O... [more]
Q0VCU84.5e-1434.38Eukaryotic translation initiation factor 3 subunit J OS=Bos taurus OX=9913 GN=EI... [more]
BLAST of CmaCh04G022860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JVF02.7e-110100.00Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661... [more]
A0A6J1HJG31.3e-10999.09Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=36... [more]
A0A6J1JS591.9e-10899.54Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661... [more]
A0A6J1HHK49.4e-10898.63Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=36... [more]
A0A6J1K2123.5e-9486.88Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661... [more]
BLAST of CmaCh04G022860 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022991178.15.5e-110100.00eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita ... [more]
XP_022963973.12.7e-10999.09eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita ... [more]
XP_023551688.11.0e-10898.63eukaryotic translation initiation factor 3 subunit J-like [Cucurbita pepo subsp.... [more]
XP_022991180.13.9e-10899.54eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita ... [more]
XP_022963981.11.9e-10798.63eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita ... [more]
BLAST of CmaCh04G022860 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G66070.11.8e-6661.95Translation initiation factor eIF3 subunit [more]
AT1G66070.21.8e-6661.95Translation initiation factor eIF3 subunit [more]
AT5G37475.11.7e-6159.56Translation initiation factor eIF3 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023194Eukaryotic translation initiation factor 3-like domain superfamilyGENE3D1.10.246.60Eukaryotic translation initiation factor 3 like domainscoord: 110..187
e-value: 3.9E-23
score: 83.7
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 1..219
e-value: 2.8E-49
score: 168.3
IPR013906Eukaryotic translation initiation factor 3 subunit JPANTHERPTHR21681EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..219
IPR013906Eukaryotic translation initiation factor 3 subunit JHAMAPMF_03009eIF3jcoord: 2..219
score: 14.890635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..37

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G022860.1CmaCh04G022860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003743 translation initiation factor activity