Homology
BLAST of CmaCh04G022480 vs. ExPASy Swiss-Prot
Match:
P0C8Q6 (Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08310 PE=3 SV=1)
HSP 1 Score: 760.0 bits (1961), Expect = 2.8e-218
Identity = 375/808 (46.41%), Postives = 541/808 (66.96%), Query Frame = 0
Query: 42 YRPICSDAINVIPSH-DESHISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGL 101
+RP+ + N H ++S ++ N I +F+++ SPDDPEL IL+P LNT++VE VLNG
Sbjct: 24 HRPLTTKLDNTRFLHPNQSKLAQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGF 83
Query: 102 RNWKVAHMFFIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGA 161
+ W +A++FF WASKQ GYR++ Y +N +ASILS ARQNA L+A+ +DV+NSRC M+PGA
Sbjct: 84 KRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGA 143
Query: 162 LGIFLRCLGSVGLVEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKAN--AIDSIENRLR 221
G F+RCLG+ GLV+EA+ +FD+VR MGLCVPN+YTYNCLLE +SK+N +++ +E RL+
Sbjct: 144 FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLK 203
Query: 222 EMKYYGCEVDKYTLTPVLKAYCNT---------------------------VLAFSKWGE 281
EM+ G DK+TLTPVL+ YCNT V++F KWG+
Sbjct: 204 EMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQ 263
Query: 282 VDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDV 341
VD+A ELIE +++ L KT+ LIHGFVKESR D A +L EKM+++G DI++YDV
Sbjct: 264 VDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDV 323
Query: 342 LIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDE 401
LIGGLCK E A++L+ ++K GI PD IL KL+ S SEE + + E D++ +
Sbjct: 324 LIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKK 383
Query: 402 GMILLYNSVLTCFVNAGSLDKAC----YLLGVTVESESHSDDIHICELHQTFKNVVPNTA 461
++LLY S+ F+ + +A L+G ES+ S+ + + + H K ++P++
Sbjct: 384 SVMLLYKSLFEGFIRNDLVHEAYSFIQNLMG-NYESDGVSEIVKLLKDHN--KAILPDSD 443
Query: 462 SFGIVIDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDM 521
S IVI+ L+K K+D+A+++ D++Q G ++ NN+I+ +CK + EES K+L +M
Sbjct: 444 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 503
Query: 522 KQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRV 581
K +G++P+ FT N I+GCL R D VGA +LL++MR +G EPWIKH+T LVK+LC+NGR
Sbjct: 504 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRA 563
Query: 582 NEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVL 641
+AC +L ++ EGFL +VA +AA+DGL+K VDR E+F+DIC +G+ PDV+AY+VL
Sbjct: 564 VDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 623
Query: 642 INGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENR 701
I LCK+ R EA+ N+M+ GL PTV TYN +IDGWCK G+ID+ + C+ RM + +
Sbjct: 624 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 683
Query: 702 EPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALV 761
P +ITYT+LI G C SGRP +A WNEM+ K C+PNRI +MA++ GLCKCG EALV
Sbjct: 684 NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALV 743
Query: 762 YYHRMEEKEMKPDSYVSVAVIDALVSKQNFPMALNILEKMVETGKVPDPADKNYVTIRDA 816
Y+ MEEKEM+PDS V ++++ + +S +N I +MV G+ P D+NY+ +
Sbjct: 744 YFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNV 803
BLAST of CmaCh04G022480 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.3e-69
Identity = 186/716 (25.98%), Postives = 321/716 (44.83%), Query Frame = 0
Query: 110 FIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLG 169
F ASK+ + + I L + ++ I D+ +SRC M I +
Sbjct: 70 FNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA 129
Query: 170 SVGLVEEANFLFD-QVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVD 229
L +E + D + GL P+++ YN +L +L N++ +E +M +G + D
Sbjct: 130 QFELQDEILSVVDWMIDEFGL-KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPD 189
Query: 230 KYTLTPVLKAYCNTVLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESRED 289
T ++KA C ++ A+ ++E EKTF ++ G+++E D
Sbjct: 190 VSTFNVLIKALCRA-------HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 249
Query: 290 MAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLI 349
A+++ E+M + G +V++ G CK+G E A+ +M
Sbjct: 250 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS--------------- 309
Query: 350 ASSSEERAMIMLLEERPKDVNDEGMI---LLYNSVLTCFVNAGSLDKACYLLGVTVESES 409
N +G +N+++ AG + A ++ V ++ E
Sbjct: 310 --------------------NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ-EG 369
Query: 410 HSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCN 469
+ D++ ++ VI GL K+G++ A+ + + MI C N + N
Sbjct: 370 YDPDVY----------------TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 429
Query: 470 NLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGH 529
LI LCK +++EE+ ++ R + G+ P T NS+ LC + A EL EMR
Sbjct: 430 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 489
Query: 530 GHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRA 589
G EP +L+ LC G+++EA N L M G ++ Y+ +DG K ++ A
Sbjct: 490 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 549
Query: 590 FEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDG 649
E+F ++ HG + V YN LI+GLCKS RV +A +++MI+ G P TYN L+
Sbjct: 550 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 609
Query: 650 WCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPN 709
+C+ GDI +A + M EP I+TY TLI G C +GR + A L +Q KG
Sbjct: 610 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 669
Query: 710 RIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVSKQNFPM--ALNI 769
AY ++ GL + + EA+ + M E+ P VS ++ + P+ A++
Sbjct: 670 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 723
Query: 770 LEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTISISDLK 820
L +++E G VP+ + + + + LS +E V +++K +S +K
Sbjct: 730 LVELLEKGFVPE--FSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVK 723
BLAST of CmaCh04G022480 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 258.1 bits (658), Expect = 3.4e-67
Identity = 171/631 (27.10%), Postives = 282/631 (44.69%), Query Frame = 0
Query: 110 FIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLG 169
F W Q+GYRH+ + V+ L + + + + + + +R
Sbjct: 98 FSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYD 157
Query: 170 SVGLVEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDK 229
G + L ++R + C P +YN +LEIL N N +M
Sbjct: 158 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL 217
Query: 230 YTLTPVLKAYCNTVLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDM 289
+T V+KA+C E+D A+ L+ + LIH K +R +
Sbjct: 218 FTFGVVMKAFCAV-------NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 277
Query: 290 AIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPD---IEILAK 349
A++LLE+M +G PD ++ +I GLCK +A + +M + G PD L
Sbjct: 278 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 337
Query: 350 LIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKACYLLGVTVESESH 409
+ A L PK I+++N+++ FV G LD A +L V S
Sbjct: 338 GLCKIGRVDAAKDLFYRIPKP-----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 397
Query: 410 SDDIHICELHQTF---------------------KNVVPNTASFGIVIDGLLKMGKLDVA 469
D +C + K PN S+ I++DG K+GK+D A
Sbjct: 398 VPD--VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 457
Query: 470 LSMFEDMIQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGC 529
++ +M G K N + N LI A CK ++ E+ +I R+M + G +P +T NS+
Sbjct: 458 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 517
Query: 530 LCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPD 589
LC ++I A LLR+M G L+ + G + EA + MV +G D
Sbjct: 518 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 577
Query: 590 IVAYSAAMDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLN 649
+ Y++ + GL + EVD+A +F+ + G+ P ++ N+LINGLC+SG V EA +F
Sbjct: 578 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 637
Query: 650 KMIVAGLVPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSG 709
+M++ G P +VT+N LI+G C++G I+ + ++ E P +T+ TL+ C G
Sbjct: 638 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 697
Query: 710 RPDDAEILWNEMQQKGCFPNRIAYMAIVHGL 717
DA +L +E + G PN + ++ +
Sbjct: 698 FVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of CmaCh04G022480 vs. ExPASy Swiss-Prot
Match:
Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)
HSP 1 Score: 254.6 bits (649), Expect = 3.8e-66
Identity = 194/729 (26.61%), Postives = 317/729 (43.48%), Query Frame = 0
Query: 81 LKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNVIASILSHARQNA 140
L+ +L+ +V VL + FF+WA +Q GY+H +N + ++
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182
Query: 141 PLRAIAMDVINSRCSMTPGALGIFLR--CL-GSVGLVEEANFLFDQVRVMGLCVPNSYTY 200
+ + + L + +R C GS + E R P+ TY
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFR----PSRSTY 242
Query: 201 NCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYCNTVLAFSKWGEVDRAME 260
NCL++ KA+ +DS REM +D +T L+ + ++ KW E A+
Sbjct: 243 NCLIQAFLKADRLDSASLIHREMSLANLRMDGFT----LRCFAYSLCKVGKWRE---ALT 302
Query: 261 LIERTGDQNPWLTEKTFYA-LIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGL 320
L+E ++ + FY LI G + S + A+ L +M+ P++ Y L+ G
Sbjct: 303 LVETEN----FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 362
Query: 321 CKKGSFEKAMTLFWKMKLLGITPDIEILAKLI---ASSSEERAMIMLLEERPKDVNDEGM 380
K + + M + G P +I L+ +S + LL++ K + G
Sbjct: 363 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 422
Query: 381 ILLYNSVLTCFVNAGSLDKA-CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIV 440
+ +YN ++ G D C LL + ++ S VV N +
Sbjct: 423 V-VYNILIGSI--CGDKDSLNCDLLDLAEKAYS----------EMLAAGVVLNKINVSSF 482
Query: 441 IDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGL 500
L GK + A S+ +MI G + + +++ LC + K+E ++ + +MK+ GL
Sbjct: 483 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 542
Query: 501 QPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACN 560
+T+ + C+ I A + EMR G P + T L+ K +V+ A
Sbjct: 543 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 602
Query: 561 FLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDIC----------------THG 620
M+ EG LP+IV YSA +DG K +V++A ++F+ +C +
Sbjct: 603 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 662
Query: 621 YQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDIDQAI 680
+P+VV Y L++G CKS RV EA L+ M + G P + Y+ LIDG CK G +D+A
Sbjct: 663 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 722
Query: 681 RCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIVHGL 740
+ M+ T+ TY++LID R D A + ++M + C PN + Y ++ GL
Sbjct: 723 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 782
Query: 741 CKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVSKQNFPMALNILEKMVETGKVPDP 786
CK G+ DEA MEEK +P+ A+ID L +LE+M G P
Sbjct: 783 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP-- 818
BLAST of CmaCh04G022480 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 253.8 bits (647), Expect = 6.5e-66
Identity = 167/620 (26.94%), Postives = 278/620 (44.84%), Query Frame = 0
Query: 174 VEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLT 233
V +A LF+ + + +P +N L +++ D + + M+ G E D YT+T
Sbjct: 51 VNDAIDLFESM-IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 110
Query: 234 PVLKAYCNTVLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDMAIKL 293
++ YC + + RA +L G + + TF L++GF E R A+ L
Sbjct: 111 IMINCYCRKKKLLFAFSVLGRAWKL----GYEPDTI---TFSTLVNGFCLEGRVSEAVAL 170
Query: 294 LEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLIASSSE 353
+++M ++ PD+ LI GLC KG +A+ L +M G PD
Sbjct: 171 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD------------- 230
Query: 354 ERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKACYLLGVTVESESHSDDIHIC 413
+ Y VL +G+ A L E
Sbjct: 231 --------------------EVTYGPVLNRLCKSGNSALALDLFRKMEE----------- 290
Query: 414 ELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCNNLIDALCK 473
+N+ + + IVID L K G D ALS+F +M G K + + ++LI LC
Sbjct: 291 ------RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 350
Query: 474 SDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKH 533
K ++ K+LR+M + P T +++ + ++ A EL EM G P
Sbjct: 351 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 410
Query: 534 STLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDIC 593
L+ CK ++EA MV +G PDIV YS ++ K VD +F++I
Sbjct: 411 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 470
Query: 594 THGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDID 653
+ G P+ + YN L+ G C+SG++N A++ +M+ G+ P+VVTY +L+DG C +G+++
Sbjct: 471 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 530
Query: 654 QAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIV 713
+A+ +M I Y +I G CN+ + DDA L+ + KG P+ + Y ++
Sbjct: 531 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 590
Query: 714 HGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVSKQNFPMALNILEKMVETGKV 773
GLCK G EA + + +M+E PD + +I A + ++ ++E+M G
Sbjct: 591 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 607
Query: 774 PDPADKNYVTIRDAIFKLSE 794
D + TI+ I LS+
Sbjct: 651 ADSS-----TIKMVIDMLSD 607
BLAST of CmaCh04G022480 vs. ExPASy TrEMBL
Match:
A0A6J1JU29 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487519 PE=4 SV=1)
HSP 1 Score: 1657.1 bits (4290), Expect = 0.0e+00
Identity = 820/847 (96.81%), Postives = 820/847 (96.81%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
Query: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR
Sbjct: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
Query: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL
Sbjct: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
Query: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC
Sbjct: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
Query: 241 NT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
NT VLAFSKWGEVDRAMELIERTGDQNPWLTEKT
Sbjct: 241 NTGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
Query: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK
Sbjct: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
Query: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA
Sbjct: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
Query: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI 480
CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI
Sbjct: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI 480
Query: 481 QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV
Sbjct: 481 QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
Query: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM
Sbjct: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
Query: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV
Sbjct: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
Query: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL
Sbjct: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
Query: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS
Sbjct: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
Query: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 821
KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI
Sbjct: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 840
BLAST of CmaCh04G022480 vs. ExPASy TrEMBL
Match:
A0A6J1HIJ6 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464360 PE=4 SV=1)
HSP 1 Score: 1603.2 bits (4150), Expect = 0.0e+00
Identity = 796/847 (93.98%), Postives = 805/847 (95.04%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISV-FSESLSPVVVSQSYRPICSDAINVIPSHDES 60
MALSRITFANQSLWKSVNFTNSVAFISV F E+LS VVVS+SYRPICS+AINV+PSHDES
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVIFGENLSSVVVSKSYRPICSEAINVLPSHDES 60
Query: 61 HISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
HISNNFISLFSQ K SPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY
Sbjct: 61 HISNNFISLFSQLKFSPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
Query: 121 RHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANF 180
RHNCYTFNVIASILSHARQNAPLRAIA DV+NSRCSMTPGALGIFLRCLGSVGLVEEANF
Sbjct: 121 RHNCYTFNVIASILSHARQNAPLRAIATDVLNSRCSMTPGALGIFLRCLGSVGLVEEANF 180
Query: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAY 240
LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVL+AY
Sbjct: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLRAY 240
Query: 241 CNT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
CN VLAFSKWGEVDRAMELIERTGDQNPWLTEK
Sbjct: 241 CNAGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
Query: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM
Sbjct: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
Query: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDK 420
KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLT FVN GSLDK
Sbjct: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTYFVNVGSLDK 420
Query: 421 ACYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDM 480
ACYLLGVTVESESHSDDIHICELHQTFK+VVPNTASFGIVIDGLLKMGKLDVALSMFEDM
Sbjct: 421 ACYLLGVTVESESHSDDIHICELHQTFKSVVPNTASFGIVIDGLLKMGKLDVALSMFEDM 480
Query: 481 IQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
IQLGCKRNQLL NNLID LCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI
Sbjct: 481 IQLGCKRNQLLYNNLIDTLCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
Query: 541 VGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
VGATELLREMRGHGHEPWIKHST LVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA
Sbjct: 541 VGATELLREMRGHGHEPWIKHSTFLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
Query: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGL 660
MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKS RVNEAEDFLNKMIVAGL
Sbjct: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSRRVNEAEDFLNKMIVAGL 660
Query: 661 VPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
VPTVVTYNLLIDGWCKS DIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI
Sbjct: 661 VPTVVTYNLLIDGWCKSEDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
Query: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALV 780
LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVA+I+ALV
Sbjct: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVALINALV 780
Query: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPT 820
SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTG GVRSLIEKGSIPT
Sbjct: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGSGVRSLIEKGSIPT 840
BLAST of CmaCh04G022480 vs. ExPASy TrEMBL
Match:
A0A6J1JSS2 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487519 PE=4 SV=1)
HSP 1 Score: 1570.1 bits (4064), Expect = 0.0e+00
Identity = 785/847 (92.68%), Postives = 785/847 (92.68%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
Query: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR
Sbjct: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
Query: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL
Sbjct: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
Query: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC
Sbjct: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
Query: 241 NT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
NT VLAFSKWGEVDRAMELIERTGDQNPWLTEKT
Sbjct: 241 NTGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
Query: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK
Sbjct: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
Query: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA
Sbjct: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
Query: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI 480
CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKM
Sbjct: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKM-------------- 480
Query: 481 QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV
Sbjct: 481 ---------------------DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
Query: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM
Sbjct: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
Query: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV
Sbjct: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
Query: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL
Sbjct: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
Query: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS
Sbjct: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
Query: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 821
KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI
Sbjct: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 812
BLAST of CmaCh04G022480 vs. ExPASy TrEMBL
Match:
A0A6J1HMT3 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464360 PE=4 SV=1)
HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 763/847 (90.08%), Postives = 772/847 (91.15%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISV-FSESLSPVVVSQSYRPICSDAINVIPSHDES 60
MALSRITFANQSLWKSVNFTNSVAFISV F E+LS VVVS+SYRPICS+AINV+PSHDES
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVIFGENLSSVVVSKSYRPICSEAINVLPSHDES 60
Query: 61 HISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
HISNNFISLFSQ K SPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY
Sbjct: 61 HISNNFISLFSQLKFSPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
Query: 121 RHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANF 180
RHNCYTFNVIASILSHARQNAPLRAIA DV+NSRCSMTPGALGIFLRCLGSVGLVEEANF
Sbjct: 121 RHNCYTFNVIASILSHARQNAPLRAIATDVLNSRCSMTPGALGIFLRCLGSVGLVEEANF 180
Query: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAY 240
LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVL+AY
Sbjct: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLRAY 240
Query: 241 CNT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
CN VLAFSKWGEVDRAMELIERTGDQNPWLTEK
Sbjct: 241 CNAGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
Query: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM
Sbjct: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
Query: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDK 420
KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLT FVN GSLDK
Sbjct: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTYFVNVGSLDK 420
Query: 421 ACYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDM 480
ACYLLGVTVESESHSDDIHICELHQTFK+VVPNTASFGIVIDGLLKM
Sbjct: 421 ACYLLGVTVESESHSDDIHICELHQTFKSVVPNTASFGIVIDGLLKM------------- 480
Query: 481 IQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI
Sbjct: 481 ----------------------DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
Query: 541 VGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
VGATELLREMRGHGHEPWIKHST LVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA
Sbjct: 541 VGATELLREMRGHGHEPWIKHSTFLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
Query: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGL 660
MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKS RVNEAEDFLNKMIVAGL
Sbjct: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSRRVNEAEDFLNKMIVAGL 660
Query: 661 VPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
VPTVVTYNLLIDGWCKS DIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI
Sbjct: 661 VPTVVTYNLLIDGWCKSEDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
Query: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALV 780
LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVA+I+ALV
Sbjct: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVALINALV 780
Query: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPT 820
SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTG GVRSLIEKGSIPT
Sbjct: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGSGVRSLIEKGSIPT 812
BLAST of CmaCh04G022480 vs. ExPASy TrEMBL
Match:
A0A6J1JQU8 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487519 PE=4 SV=1)
HSP 1 Score: 1407.5 bits (3642), Expect = 0.0e+00
Identity = 717/847 (84.65%), Postives = 717/847 (84.65%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
Query: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR
Sbjct: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
Query: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL
Sbjct: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
Query: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC
Sbjct: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
Query: 241 NT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
NT VLAFSKWGEVDRAMELIERTGDQNPWLTEKT
Sbjct: 241 NTGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
Query: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK
Sbjct: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
Query: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDE
Sbjct: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDE---------------------- 420
Query: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI 480
Sbjct: 421 ------------------------------------------------------------ 480
Query: 481 QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV
Sbjct: 481 ---------------------DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
Query: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM
Sbjct: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
Query: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV
Sbjct: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
Query: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL
Sbjct: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
Query: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS
Sbjct: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 744
Query: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 821
KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI
Sbjct: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 744
BLAST of CmaCh04G022480 vs. NCBI nr
Match:
XP_022990708.1 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X1 [Cucurbita maxima])
HSP 1 Score: 1657.1 bits (4290), Expect = 0.0e+00
Identity = 820/847 (96.81%), Postives = 820/847 (96.81%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
Query: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR
Sbjct: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
Query: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL
Sbjct: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
Query: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC
Sbjct: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
Query: 241 NT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
NT VLAFSKWGEVDRAMELIERTGDQNPWLTEKT
Sbjct: 241 NTGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
Query: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK
Sbjct: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
Query: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA
Sbjct: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
Query: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI 480
CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI
Sbjct: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI 480
Query: 481 QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV
Sbjct: 481 QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
Query: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM
Sbjct: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
Query: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV
Sbjct: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
Query: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL
Sbjct: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
Query: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS
Sbjct: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
Query: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 821
KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI
Sbjct: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 840
BLAST of CmaCh04G022480 vs. NCBI nr
Match:
XP_022964306.1 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X1 [Cucurbita moschata])
HSP 1 Score: 1603.2 bits (4150), Expect = 0.0e+00
Identity = 796/847 (93.98%), Postives = 805/847 (95.04%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISV-FSESLSPVVVSQSYRPICSDAINVIPSHDES 60
MALSRITFANQSLWKSVNFTNSVAFISV F E+LS VVVS+SYRPICS+AINV+PSHDES
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVIFGENLSSVVVSKSYRPICSEAINVLPSHDES 60
Query: 61 HISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
HISNNFISLFSQ K SPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY
Sbjct: 61 HISNNFISLFSQLKFSPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
Query: 121 RHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANF 180
RHNCYTFNVIASILSHARQNAPLRAIA DV+NSRCSMTPGALGIFLRCLGSVGLVEEANF
Sbjct: 121 RHNCYTFNVIASILSHARQNAPLRAIATDVLNSRCSMTPGALGIFLRCLGSVGLVEEANF 180
Query: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAY 240
LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVL+AY
Sbjct: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLRAY 240
Query: 241 CNT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
CN VLAFSKWGEVDRAMELIERTGDQNPWLTEK
Sbjct: 241 CNAGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
Query: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM
Sbjct: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
Query: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDK 420
KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLT FVN GSLDK
Sbjct: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTYFVNVGSLDK 420
Query: 421 ACYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDM 480
ACYLLGVTVESESHSDDIHICELHQTFK+VVPNTASFGIVIDGLLKMGKLDVALSMFEDM
Sbjct: 421 ACYLLGVTVESESHSDDIHICELHQTFKSVVPNTASFGIVIDGLLKMGKLDVALSMFEDM 480
Query: 481 IQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
IQLGCKRNQLL NNLID LCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI
Sbjct: 481 IQLGCKRNQLLYNNLIDTLCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
Query: 541 VGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
VGATELLREMRGHGHEPWIKHST LVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA
Sbjct: 541 VGATELLREMRGHGHEPWIKHSTFLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
Query: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGL 660
MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKS RVNEAEDFLNKMIVAGL
Sbjct: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSRRVNEAEDFLNKMIVAGL 660
Query: 661 VPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
VPTVVTYNLLIDGWCKS DIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI
Sbjct: 661 VPTVVTYNLLIDGWCKSEDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
Query: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALV 780
LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVA+I+ALV
Sbjct: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVALINALV 780
Query: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPT 820
SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTG GVRSLIEKGSIPT
Sbjct: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGSGVRSLIEKGSIPT 840
BLAST of CmaCh04G022480 vs. NCBI nr
Match:
XP_023554296.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1575.5 bits (4078), Expect = 0.0e+00
Identity = 775/817 (94.86%), Postives = 782/817 (95.72%), Query Frame = 0
Query: 30 SESLSPVVVSQSYRPICSDAINVIPSHDESHISNNFISLFSQRKISPDDPELKILAPRLN 89
S +SPVVVSQSYRPICSDAINV+PSHDESHISNNFISLFSQRK SPDDPELKILAPRLN
Sbjct: 61 SVKISPVVVSQSYRPICSDAINVLPSHDESHISNNFISLFSQRKFSPDDPELKILAPRLN 120
Query: 90 TQIVENVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIAMDV 149
TQIVENVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIA DV
Sbjct: 121 TQIVENVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIATDV 180
Query: 150 INSRCSMTPGALGIFLRCLGSVGLVEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKANA 209
+NSRCSMTPGALGIFLRCLGSVGLVEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKANA
Sbjct: 181 LNSRCSMTPGALGIFLRCLGSVGLVEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKANA 240
Query: 210 IDSIENRLREMKYYGCEVDKYTLTPVLKAYCNT--------------------------- 269
IDSIENRLREMKYYGCEVDKYTLTPVLKAYCN
Sbjct: 241 IDSIENRLREMKYYGCEVDKYTLTPVLKAYCNAGKFDKALNVYNDIHERGWIDGYVFSIL 300
Query: 270 VLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDMAIKLLEKMKKLGF 329
VLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDMAIKLLEKMKKLGF
Sbjct: 301 VLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDMAIKLLEKMKKLGF 360
Query: 330 PPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLIASSSEERAMIMLLE 389
PPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLIASSSEERAMIMLLE
Sbjct: 361 PPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLIASSSEERAMIMLLE 420
Query: 390 ERPKDVNDEGMILLYNSVLTCFVNAGSLDKACYLLGVTVESESHSDDIHICELHQTFKNV 449
ERPKDVNDEGMILLYNSVLTCFVN GSLDKACYLLGVTVESESHSDDIHICELHQTFK+V
Sbjct: 421 ERPKDVNDEGMILLYNSVLTCFVNVGSLDKACYLLGVTVESESHSDDIHICELHQTFKSV 480
Query: 450 VPNTASFGIVIDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCNNLIDALCKSDKLEESYK 509
VPNTASFGIVIDGLLKMGKLD+ALSMFEDMIQLGCKRNQLL NNLIDALCKSDKLEESYK
Sbjct: 481 VPNTASFGIVIDGLLKMGKLDIALSMFEDMIQLGCKRNQLLYNNLIDALCKSDKLEESYK 540
Query: 510 ILRDMKQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLC 569
ILRDMKQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLC
Sbjct: 541 ILRDMKQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLC 600
Query: 570 KNGRVNEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDICTHGYQPDVV 629
KNGRVNEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDICTHGYQPDVV
Sbjct: 601 KNGRVNEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDICTHGYQPDVV 660
Query: 630 AYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDIDQAIRCLSRM 689
AYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDIDQAIRCLSRM
Sbjct: 661 AYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDIDQAIRCLSRM 720
Query: 690 NGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIVHGLCKCGRP 749
NGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIVHGLCKCGRP
Sbjct: 721 NGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIVHGLCKCGRP 780
Query: 750 DEALVYYHRMEEKEMKPDSYVSVAVIDALVSKQNFPMALNILEKMVETGKVPDPADKNYV 809
DEALVYYHRMEEKEMKPDSYVSVA+I+ALVSKQNFPMALNILEKMVETGKVPDPADKNYV
Sbjct: 781 DEALVYYHRMEEKEMKPDSYVSVALINALVSKQNFPMALNILEKMVETGKVPDPADKNYV 840
Query: 810 TIRDAIFKLSEDERTGPGVRSLIEKGSIPTISISDLK 820
TIRDAIFKLSEDERTG GVRSLIEKGSIPTISISDLK
Sbjct: 841 TIRDAIFKLSEDERTGSGVRSLIEKGSIPTISISDLK 877
BLAST of CmaCh04G022480 vs. NCBI nr
Match:
XP_022990709.1 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X2 [Cucurbita maxima])
HSP 1 Score: 1570.1 bits (4064), Expect = 0.0e+00
Identity = 785/847 (92.68%), Postives = 785/847 (92.68%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVFSESLSPVVVSQSYRPICSDAINVIPSHDESH 60
Query: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR
Sbjct: 61 ISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYR 120
Query: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL
Sbjct: 121 HNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANFL 180
Query: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC
Sbjct: 181 FDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYC 240
Query: 241 NT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
NT VLAFSKWGEVDRAMELIERTGDQNPWLTEKT
Sbjct: 241 NTGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEKT 300
Query: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK
Sbjct: 301 FYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMK 360
Query: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA
Sbjct: 361 LLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKA 420
Query: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMI 480
CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKM
Sbjct: 421 CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKM-------------- 480
Query: 481 QLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV
Sbjct: 481 ---------------------DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIV 540
Query: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM
Sbjct: 541 GATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAM 600
Query: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV
Sbjct: 601 DGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLV 660
Query: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL
Sbjct: 661 PTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEIL 720
Query: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS
Sbjct: 721 WNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVS 780
Query: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 821
KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI
Sbjct: 781 KQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTI 812
BLAST of CmaCh04G022480 vs. NCBI nr
Match:
XP_022964314.1 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X2 [Cucurbita moschata])
HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 763/847 (90.08%), Postives = 772/847 (91.15%), Query Frame = 0
Query: 1 MALSRITFANQSLWKSVNFTNSVAFISV-FSESLSPVVVSQSYRPICSDAINVIPSHDES 60
MALSRITFANQSLWKSVNFTNSVAFISV F E+LS VVVS+SYRPICS+AINV+PSHDES
Sbjct: 1 MALSRITFANQSLWKSVNFTNSVAFISVIFGENLSSVVVSKSYRPICSEAINVLPSHDES 60
Query: 61 HISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
HISNNFISLFSQ K SPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY
Sbjct: 61 HISNNFISLFSQLKFSPDDPELKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGY 120
Query: 121 RHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLGSVGLVEEANF 180
RHNCYTFNVIASILSHARQNAPLRAIA DV+NSRCSMTPGALGIFLRCLGSVGLVEEANF
Sbjct: 121 RHNCYTFNVIASILSHARQNAPLRAIATDVLNSRCSMTPGALGIFLRCLGSVGLVEEANF 180
Query: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAY 240
LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVL+AY
Sbjct: 181 LFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLRAY 240
Query: 241 CNT---------------------------VLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
CN VLAFSKWGEVDRAMELIERTGDQNPWLTEK
Sbjct: 241 CNAGKFDKALNVYNDIHERGWIDGYVFSILVLAFSKWGEVDRAMELIERTGDQNPWLTEK 300
Query: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM
Sbjct: 301 TFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKM 360
Query: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDK 420
KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLT FVN GSLDK
Sbjct: 361 KLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTYFVNVGSLDK 420
Query: 421 ACYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDM 480
ACYLLGVTVESESHSDDIHICELHQTFK+VVPNTASFGIVIDGLLKM
Sbjct: 421 ACYLLGVTVESESHSDDIHICELHQTFKSVVPNTASFGIVIDGLLKM------------- 480
Query: 481 IQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI
Sbjct: 481 ----------------------DKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDI 540
Query: 541 VGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
VGATELLREMRGHGHEPWIKHST LVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA
Sbjct: 541 VGATELLREMRGHGHEPWIKHSTFLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAA 600
Query: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGL 660
MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKS RVNEAEDFLNKMIVAGL
Sbjct: 601 MDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSRRVNEAEDFLNKMIVAGL 660
Query: 661 VPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
VPTVVTYNLLIDGWCKS DIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI
Sbjct: 661 VPTVVTYNLLIDGWCKSEDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEI 720
Query: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALV 780
LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVA+I+ALV
Sbjct: 721 LWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVALINALV 780
Query: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPT 820
SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTG GVRSLIEKGSIPT
Sbjct: 781 SKQNFPMALNILEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGSGVRSLIEKGSIPT 812
BLAST of CmaCh04G022480 vs. TAIR 10
Match:
AT5G08310.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 760.0 bits (1961), Expect = 2.0e-219
Identity = 375/808 (46.41%), Postives = 541/808 (66.96%), Query Frame = 0
Query: 42 YRPICSDAINVIPSH-DESHISNNFISLFSQRKISPDDPELKILAPRLNTQIVENVLNGL 101
+RP+ + N H ++S ++ N I +F+++ SPDDPEL IL+P LNT++VE VLNG
Sbjct: 24 HRPLTTKLDNTRFLHPNQSKLAQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGF 83
Query: 102 RNWKVAHMFFIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGA 161
+ W +A++FF WASKQ GYR++ Y +N +ASILS ARQNA L+A+ +DV+NSRC M+PGA
Sbjct: 84 KRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGA 143
Query: 162 LGIFLRCLGSVGLVEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKAN--AIDSIENRLR 221
G F+RCLG+ GLV+EA+ +FD+VR MGLCVPN+YTYNCLLE +SK+N +++ +E RL+
Sbjct: 144 FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLK 203
Query: 222 EMKYYGCEVDKYTLTPVLKAYCNT---------------------------VLAFSKWGE 281
EM+ G DK+TLTPVL+ YCNT V++F KWG+
Sbjct: 204 EMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQ 263
Query: 282 VDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDV 341
VD+A ELIE +++ L KT+ LIHGFVKESR D A +L EKM+++G DI++YDV
Sbjct: 264 VDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDV 323
Query: 342 LIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLIASSSEERAMIMLLEERPKDVNDE 401
LIGGLCK E A++L+ ++K GI PD IL KL+ S SEE + + E D++ +
Sbjct: 324 LIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKK 383
Query: 402 GMILLYNSVLTCFVNAGSLDKAC----YLLGVTVESESHSDDIHICELHQTFKNVVPNTA 461
++LLY S+ F+ + +A L+G ES+ S+ + + + H K ++P++
Sbjct: 384 SVMLLYKSLFEGFIRNDLVHEAYSFIQNLMG-NYESDGVSEIVKLLKDHN--KAILPDSD 443
Query: 462 SFGIVIDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDM 521
S IVI+ L+K K+D+A+++ D++Q G ++ NN+I+ +CK + EES K+L +M
Sbjct: 444 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 503
Query: 522 KQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRV 581
K +G++P+ FT N I+GCL R D VGA +LL++MR +G EPWIKH+T LVK+LC+NGR
Sbjct: 504 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRA 563
Query: 582 NEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVL 641
+AC +L ++ EGFL +VA +AA+DGL+K VDR E+F+DIC +G+ PDV+AY+VL
Sbjct: 564 VDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 623
Query: 642 INGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENR 701
I LCK+ R EA+ N+M+ GL PTV TYN +IDGWCK G+ID+ + C+ RM + +
Sbjct: 624 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 683
Query: 702 EPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIVHGLCKCGRPDEALV 761
P +ITYT+LI G C SGRP +A WNEM+ K C+PNRI +MA++ GLCKCG EALV
Sbjct: 684 NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALV 743
Query: 762 YYHRMEEKEMKPDSYVSVAVIDALVSKQNFPMALNILEKMVETGKVPDPADKNYVTIRDA 816
Y+ MEEKEM+PDS V ++++ + +S +N I +MV G+ P D+NY+ +
Sbjct: 744 YFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNV 803
BLAST of CmaCh04G022480 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 266.2 bits (679), Expect = 9.0e-71
Identity = 186/716 (25.98%), Postives = 321/716 (44.83%), Query Frame = 0
Query: 110 FIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLG 169
F ASK+ + + I L + ++ I D+ +SRC M I +
Sbjct: 70 FNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA 129
Query: 170 SVGLVEEANFLFD-QVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVD 229
L +E + D + GL P+++ YN +L +L N++ +E +M +G + D
Sbjct: 130 QFELQDEILSVVDWMIDEFGL-KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPD 189
Query: 230 KYTLTPVLKAYCNTVLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESRED 289
T ++KA C ++ A+ ++E EKTF ++ G+++E D
Sbjct: 190 VSTFNVLIKALCRA-------HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 249
Query: 290 MAIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLI 349
A+++ E+M + G +V++ G CK+G E A+ +M
Sbjct: 250 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS--------------- 309
Query: 350 ASSSEERAMIMLLEERPKDVNDEGMI---LLYNSVLTCFVNAGSLDKACYLLGVTVESES 409
N +G +N+++ AG + A ++ V ++ E
Sbjct: 310 --------------------NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ-EG 369
Query: 410 HSDDIHICELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCN 469
+ D++ ++ VI GL K+G++ A+ + + MI C N + N
Sbjct: 370 YDPDVY----------------TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 429
Query: 470 NLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGH 529
LI LCK +++EE+ ++ R + G+ P T NS+ LC + A EL EMR
Sbjct: 430 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 489
Query: 530 GHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRA 589
G EP +L+ LC G+++EA N L M G ++ Y+ +DG K ++ A
Sbjct: 490 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 549
Query: 590 FEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDG 649
E+F ++ HG + V YN LI+GLCKS RV +A +++MI+ G P TYN L+
Sbjct: 550 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 609
Query: 650 WCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPN 709
+C+ GDI +A + M EP I+TY TLI G C +GR + A L +Q KG
Sbjct: 610 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 669
Query: 710 RIAYMAIVHGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVSKQNFPM--ALNI 769
AY ++ GL + + EA+ + M E+ P VS ++ + P+ A++
Sbjct: 670 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 723
Query: 770 LEKMVETGKVPDPADKNYVTIRDAIFKLSEDERTGPGVRSLIEKGSIPTISISDLK 820
L +++E G VP+ + + + + LS +E V +++K +S +K
Sbjct: 730 LVELLEKGFVPE--FSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVK 723
BLAST of CmaCh04G022480 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 258.1 bits (658), Expect = 2.4e-68
Identity = 171/631 (27.10%), Postives = 282/631 (44.69%), Query Frame = 0
Query: 110 FIWASKQHGYRHNCYTFNVIASILSHARQNAPLRAIAMDVINSRCSMTPGALGIFLRCLG 169
F W Q+GYRH+ + V+ L + + + + + + +R
Sbjct: 98 FSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYD 157
Query: 170 SVGLVEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDK 229
G + L ++R + C P +YN +LEIL N N +M
Sbjct: 158 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL 217
Query: 230 YTLTPVLKAYCNTVLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDM 289
+T V+KA+C E+D A+ L+ + LIH K +R +
Sbjct: 218 FTFGVVMKAFCAV-------NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 277
Query: 290 AIKLLEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPD---IEILAK 349
A++LLE+M +G PD ++ +I GLCK +A + +M + G PD L
Sbjct: 278 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 337
Query: 350 LIASSSEERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKACYLLGVTVESESH 409
+ A L PK I+++N+++ FV G LD A +L V S
Sbjct: 338 GLCKIGRVDAAKDLFYRIPKP-----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 397
Query: 410 SDDIHICELHQTF---------------------KNVVPNTASFGIVIDGLLKMGKLDVA 469
D +C + K PN S+ I++DG K+GK+D A
Sbjct: 398 VPD--VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 457
Query: 470 LSMFEDMIQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGLQPTHFTHNSIFGC 529
++ +M G K N + N LI A CK ++ E+ +I R+M + G +P +T NS+
Sbjct: 458 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 517
Query: 530 LCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACNFLGNMVREGFLPD 589
LC ++I A LLR+M G L+ + G + EA + MV +G D
Sbjct: 518 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 577
Query: 590 IVAYSAAMDGLVKIHEVDRAFEMFQDICTHGYQPDVVAYNVLINGLCKSGRVNEAEDFLN 649
+ Y++ + GL + EVD+A +F+ + G+ P ++ N+LINGLC+SG V EA +F
Sbjct: 578 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 637
Query: 650 KMIVAGLVPTVVTYNLLIDGWCKSGDIDQAIRCLSRMNGENREPTIITYTTLIDGCCNSG 709
+M++ G P +VT+N LI+G C++G I+ + ++ E P +T+ TL+ C G
Sbjct: 638 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 697
Query: 710 RPDDAEILWNEMQQKGCFPNRIAYMAIVHGL 717
DA +L +E + G PN + ++ +
Sbjct: 698 FVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of CmaCh04G022480 vs. TAIR 10
Match:
AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 254.6 bits (649), Expect = 2.7e-67
Identity = 194/729 (26.61%), Postives = 317/729 (43.48%), Query Frame = 0
Query: 81 LKILAPRLNTQIVENVLNGLRNWKVAHMFFIWASKQHGYRHNCYTFNVIASILSHARQNA 140
L+ +L+ +V VL + FF+WA +Q GY+H +N + ++
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182
Query: 141 PLRAIAMDVINSRCSMTPGALGIFLR--CL-GSVGLVEEANFLFDQVRVMGLCVPNSYTY 200
+ + + L + +R C GS + E R P+ TY
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFR----PSRSTY 242
Query: 201 NCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLTPVLKAYCNTVLAFSKWGEVDRAME 260
NCL++ KA+ +DS REM +D +T L+ + ++ KW E A+
Sbjct: 243 NCLIQAFLKADRLDSASLIHREMSLANLRMDGFT----LRCFAYSLCKVGKWRE---ALT 302
Query: 261 LIERTGDQNPWLTEKTFYA-LIHGFVKESREDMAIKLLEKMKKLGFPPDISIYDVLIGGL 320
L+E ++ + FY LI G + S + A+ L +M+ P++ Y L+ G
Sbjct: 303 LVETEN----FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 362
Query: 321 CKKGSFEKAMTLFWKMKLLGITPDIEILAKLI---ASSSEERAMIMLLEERPKDVNDEGM 380
K + + M + G P +I L+ +S + LL++ K + G
Sbjct: 363 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 422
Query: 381 ILLYNSVLTCFVNAGSLDKA-CYLLGVTVESESHSDDIHICELHQTFKNVVPNTASFGIV 440
+ +YN ++ G D C LL + ++ S VV N +
Sbjct: 423 V-VYNILIGSI--CGDKDSLNCDLLDLAEKAYS----------EMLAAGVVLNKINVSSF 482
Query: 441 IDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCNNLIDALCKSDKLEESYKILRDMKQSGL 500
L GK + A S+ +MI G + + +++ LC + K+E ++ + +MK+ GL
Sbjct: 483 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 542
Query: 501 QPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKHSTLLVKQLCKNGRVNEACN 560
+T+ + C+ I A + EMR G P + T L+ K +V+ A
Sbjct: 543 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 602
Query: 561 FLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDIC----------------THG 620
M+ EG LP+IV YSA +DG K +V++A ++F+ +C +
Sbjct: 603 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 662
Query: 621 YQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDIDQAI 680
+P+VV Y L++G CKS RV EA L+ M + G P + Y+ LIDG CK G +D+A
Sbjct: 663 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 722
Query: 681 RCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIVHGL 740
+ M+ T+ TY++LID R D A + ++M + C PN + Y ++ GL
Sbjct: 723 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 782
Query: 741 CKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVSKQNFPMALNILEKMVETGKVPDP 786
CK G+ DEA MEEK +P+ A+ID L +LE+M G P
Sbjct: 783 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP-- 818
BLAST of CmaCh04G022480 vs. TAIR 10
Match:
AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 253.8 bits (647), Expect = 4.6e-67
Identity = 167/620 (26.94%), Postives = 278/620 (44.84%), Query Frame = 0
Query: 174 VEEANFLFDQVRVMGLCVPNSYTYNCLLEILSKANAIDSIENRLREMKYYGCEVDKYTLT 233
V +A LF+ + + +P +N L +++ D + + M+ G E D YT+T
Sbjct: 51 VNDAIDLFESM-IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 110
Query: 234 PVLKAYCNTVLAFSKWGEVDRAMELIERTGDQNPWLTEKTFYALIHGFVKESREDMAIKL 293
++ YC + + RA +L G + + TF L++GF E R A+ L
Sbjct: 111 IMINCYCRKKKLLFAFSVLGRAWKL----GYEPDTI---TFSTLVNGFCLEGRVSEAVAL 170
Query: 294 LEKMKKLGFPPDISIYDVLIGGLCKKGSFEKAMTLFWKMKLLGITPDIEILAKLIASSSE 353
+++M ++ PD+ LI GLC KG +A+ L +M G PD
Sbjct: 171 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD------------- 230
Query: 354 ERAMIMLLEERPKDVNDEGMILLYNSVLTCFVNAGSLDKACYLLGVTVESESHSDDIHIC 413
+ Y VL +G+ A L E
Sbjct: 231 --------------------EVTYGPVLNRLCKSGNSALALDLFRKMEE----------- 290
Query: 414 ELHQTFKNVVPNTASFGIVIDGLLKMGKLDVALSMFEDMIQLGCKRNQLLCNNLIDALCK 473
+N+ + + IVID L K G D ALS+F +M G K + + ++LI LC
Sbjct: 291 ------RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 350
Query: 474 SDKLEESYKILRDMKQSGLQPTHFTHNSIFGCLCRREDIVGATELLREMRGHGHEPWIKH 533
K ++ K+LR+M + P T +++ + ++ A EL EM G P
Sbjct: 351 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 410
Query: 534 STLLVKQLCKNGRVNEACNFLGNMVREGFLPDIVAYSAAMDGLVKIHEVDRAFEMFQDIC 593
L+ CK ++EA MV +G PDIV YS ++ K VD +F++I
Sbjct: 411 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 470
Query: 594 THGYQPDVVAYNVLINGLCKSGRVNEAEDFLNKMIVAGLVPTVVTYNLLIDGWCKSGDID 653
+ G P+ + YN L+ G C+SG++N A++ +M+ G+ P+VVTY +L+DG C +G+++
Sbjct: 471 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 530
Query: 654 QAIRCLSRMNGENREPTIITYTTLIDGCCNSGRPDDAEILWNEMQQKGCFPNRIAYMAIV 713
+A+ +M I Y +I G CN+ + DDA L+ + KG P+ + Y ++
Sbjct: 531 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 590
Query: 714 HGLCKCGRPDEALVYYHRMEEKEMKPDSYVSVAVIDALVSKQNFPMALNILEKMVETGKV 773
GLCK G EA + + +M+E PD + +I A + ++ ++E+M G
Sbjct: 591 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 607
Query: 774 PDPADKNYVTIRDAIFKLSE 794
D + TI+ I LS+
Sbjct: 651 ADSS-----TIKMVIDMLSD 607
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C8Q6 | 2.8e-218 | 46.41 | Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS... | [more] |
Q9LFF1 | 1.3e-69 | 25.98 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 3.4e-67 | 27.10 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9M9X9 | 3.8e-66 | 26.61 | Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop... | [more] |
Q6NQ83 | 6.5e-66 | 26.94 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JU29 | 0.0e+00 | 96.81 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
A0A6J1HIJ6 | 0.0e+00 | 93.98 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
A0A6J1JSS2 | 0.0e+00 | 92.68 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
A0A6J1HMT3 | 0.0e+00 | 90.08 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
A0A6J1JQU8 | 0.0e+00 | 84.65 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
Match Name | E-value | Identity | Description | |
XP_022990708.1 | 0.0e+00 | 96.81 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
XP_022964306.1 | 0.0e+00 | 93.98 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
XP_023554296.1 | 0.0e+00 | 94.86 | LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g08... | [more] |
XP_022990709.1 | 0.0e+00 | 92.68 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
XP_022964314.1 | 0.0e+00 | 90.08 | putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial is... | [more] |
Match Name | E-value | Identity | Description | |
AT5G08310.1 | 2.0e-219 | 46.41 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53700.1 | 9.0e-71 | 25.98 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 2.4e-68 | 27.10 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G06710.1 | 2.7e-67 | 26.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22470.1 | 4.6e-67 | 26.94 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |