CmaCh04G022310 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G022310
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionmitochondrial intermembrane space import and assembly protein 40 homolog
LocationCma_Chr04: 15547841 .. 15551289 (-)
RNA-Seq ExpressionCmaCh04G022310
SyntenyCmaCh04G022310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCAACTTGAGTTGTGGACTTGAGAGAAGGATGGGTCAAACGGAAAGCGTAGCAGCGGCATCGTCTACGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCAGTCTCCGGTTGTTCTTCTGAATCTCCCTCCATGGAGTCTCTAATTGCAGGTTCGTCGTCTTCTTACTGAGTTCTTCTTGTCTTTTTGTTCAGTTCGTATTCCTAGTGTCTATAAAAATGTATCTGTAGGCTAACGAAGCGATCTTTTTCATGTGAGAACAAATTGTGTTCGAGAAATTTAAATTTTGAGCGCTAAAAGATCTATGGAGTATCATGAATTTTGCTGAGTTGATTTTCTGTTTGTTTTATTGATTTTTTTCTTTCCTTCGTAGCATGTTTTGATTACATTCAGTTCTTGGAACGTTGCCGTGTTTGTATTGGAAGATTAAATAAGGTTTTCTAAATGAAACTGAGGTTTCTGGTAGATTGAGACTAAGCATTGAGTTAAAGAGAGCTTGTTGGAACATGCGGGAGAGTTACAGAATACATGAGCCTGTACTGGCAATCTTCACAAATGAAGAGCCACTTACTATCCAAATATGTGAAATACTAAGCTGACAGCACACAACTTAAAGTGGCCTATAGGCTAGAGGTAGGAGAGTTAATTCAATTTCAACAGGACAGCGATGCTTTAGTTCAGCTCTCTCATTTTGGAAAGAGATATAGGAGGGATGACAAGATAATCTAACGTGGATTCCTTGCTCTTCAGCACTTTAAACGAGTGGTAACTCTCGTCAACCATCAAATAGAGGACTAAGATTTCTGTTTCATGTTTGGTTTCGATAGGAAGTTTGAATTGTTTGAAACGAAGTTTGAATTGTTTGAAACGAAGGATAGCCTCTTTGTTCATTTTTATAAATTAACGTGGGGAAGAGAAGGTTGTAGATGTTCCATGACTTGCAAAACAATTTCAGCAGATTTAATTATACAGCCACCTGTGAAGAAGTCATCAGCTTCCATTTAGTGGTCGGTATTTTATTTTTTTGATTCTGTGAATAAGGAAATTTCATGGGTCTGTCTGTCGGCACTAGTGTATGAGGGGATAAACACAATGGACAACACTCGTTAGATCTTGCTGCTGAAGGTTTCTTCAGGCTTCTAATCTGTAGCTTCTAAGTATTGGAGGGCCAAATTTGTCACAGATGAAAGTTGTATCGATCTAATTTGTGAGAGGTTACTTAAATACGTAGACCAGACTTCTTAGAGGAGTGCATCCAATCGAAACTTTTCCAGTGAAAACTTAACCTGATTGCACCATGCTTCAACTTCATGTGGTTTATCTTATAGTTCTTCATTGATGGGGAATTTTTTTGAGCAAAATGCTAAGCAATTGTTGCAGCCATACTACCATAAAACTGCGGTTTTCTGTAGACTAACAAGTGAGCTCGTGAGTTATTATTCAGGTAAGGGAGAATACTATAGAGTTCATATGAGCTCAAACTGAAAGTGCCTATGAAAAGAAAACTACAAACTACCACACATCGGTTGTGAAAAACTAAGCTGGCATCACAAGAGATGACCGAAAAAATTGAATGATACTGTCATTTAATCTGAAACAGAACGATATTATTTGTCTAGTGTAATTTAACAATTCTTTGTTTTAAGTTTATTAGGTTTAAATAAAGATAAAATGAAATATTATTTGCAATTCTTGTTGTACTCTTTTCGTTTGGTGTTAGATTTGAGAACATGTTTGATAATCAACAACATTGTTGTCATTCGTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGGTTTGTCCACTCTAAAGATCTAAGTTTTCTTTTGAAGTTGGAATTGCCAACAAAGAAGTTGACCTATGCTTCTTTCAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGGGTCCAATTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGTAAGGAAAAAGATGGAACCACCCCATCCACTAACTTTGAAGTTACATTTTCAATCGTTATCCCTTAATTGTTGAGTCAATTTGTTCTCTATACGTTTAAAGTTTCATTGTGGTTCATACTTTTGCATTAGAACTTACCAAATGTCTTTGACGGTAGTGAGAGATAATTGGAATTCAAAAAAGCAAATAGTTTGTACATTTAAGTTATTATGTTTTTGGTTGAAAAGTAGAAACAAGGGGCTATAACTAATCTTGTCTAACTCTGCAACTAATGTGCTCCTTAGATTTCTATTACTTTTTCCTTTAAATTTTATTTATTATTTTTATAATTTACTACATTAGGTTTATTTTGCTTTTTTACTAAAGAGGAATGTAACTATGAGATCCCACATCGATTGGGGAGGAGAACGAAACACTTTTTTAAGGGTATGAAAACCTCTCTCTAGCAAACGTGTTTTAAAAACTTTGAGGGGAAGCCTAAAGTGACAATATCTGCTAACGGTGGGCTTGGGCCATTACAAATGGTATAAGAGCCAACACTGGGCGATGTGCCAGTGAGGAGGTTGTTCCCCGAAGGTGGGTAGACACGAGGCAGTGTGCTAGTAAGGACCCTGGGTCTAGAAGGGGGGAGGAGGGATTTGGTGGGGTCCCACATCGATCGGAGAAAGAAACGAGGGCCAGTGAGAATGCTGGACCTTGAAGGGGGGTGAATTGTGAGCTCCCATATCGGTTGGGGAGGAGAACGGAACATTCTTATAGCATGGTGTTCCGTTCTCCTCCCTAACAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAGGGAATTAAGCTTTAATGAAATAGATGGGAAATCTGTATTAGTAAAAGTATAAGAATTAAAGTGAAACAGTCATGGGATTGAAAGTTTGTTTGGTATCTTCAAAGAAAATTGTGGCACATACTAACAGCTAAATTGTGATTGATTTTTTCAAAGGGATCGGACTGCGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAAGAAGAGGAAGAGGAAAGGGAAAAGCAGAAGGCTGAAGAGCCAACACAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAGTCCAAGCTTTAGCTCAAACCATGAGCTTCCATTTTGTCTGCCCTGGTATGAATGATTATTATGATTATTTTATTGGGGATGAGCCTACATTCTTCAAATAAATATGTTTGAAAATCTGCTAGTTACATTGTAGCAAATATTCCTGATTTTTAAAAGGTAAAGAGTAGACATGAACTTTACCTTAATGAGTTTATGCTATAATAGTGATGATGGGGTAAGAATTTTGGGAGTAATGAAGATAGTTTTTAAGGACAAGTATGGTG

mRNA sequence

TTCCAACTTGAGTTGTGGACTTGAGAGAAGGATGGGTCAAACGGAAAGCGTAGCAGCGGCATCGTCTACGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCAGTCTCCGGTTGTTCTTCTGAATCTCCCTCCATGGAGTCTCTAATTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGGGTCCAATTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGCGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAAGAAGAGGAAGAGGAAAGGGAAAAGCAGAAGGCTGAAGAGCCAACACAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAGTCCAAGCTTTAGCTCAAACCATGAGCTTCCATTTTGTCTGCCCTGGTATGAATGATTATTATGATTATTTTATTGGGGATGAGCCTACATTCTTCAAATAAATATGTTTGAAAATCTGCTAGTTACATTGTAGCAAATATTCCTGATTTTTAAAAGGTAAAGAGTAGACATGAACTTTACCTTAATGAGTTTATGCTATAATAGTGATGATGGGGTAAGAATTTTGGGAGTAATGAAGATAGTTTTTAAGGACAAGTATGGTG

Coding sequence (CDS)

ATGGGTCAAACGGAAAGCGTAGCAGCGGCATCGTCTACGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCAGTCTCCGGTTGTTCTTCTGAATCTCCCTCCATGGAGTCTCTAATTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGGGTCCAATTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGCGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAAGAAGAGGAAGAGGAAAGGGAAAAGCAGAAGGCTGAAGAGCCAACACAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAGTCCAAGCTTTAG

Protein sequence

MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL
Homology
[Close]
BLAST of CmaCh04G022310 vs. ExPASy Swiss-Prot
Match: Q8GYJ4 (Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Arabidopsis thaliana OX=3702 GN=MIA40 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.2e-41
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 0 

Query: 1   MGQTE----SVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNE--ANES 60
           MGQ +    S+   ++TN  P S N   SP     + SPSM+SL+AEAAAYG +   NES
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSAN---SPRDSEDTSSPSMDSLLAEAAAYGEDDNENES 60

Query: 61  LEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANP 120
           LEAKA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGSDCV+PFVALQSCI ANP
Sbjct: 61  LEAKAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANP 120

Query: 121 NAFSKDVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSRE-PQAPKSKL 164
           +AFSK V  +E+E E++E      + P QD+RIIPP W+++ P++  SKL
Sbjct: 121 DAFSKSVTGDEKETEKKEE-----QPPVQDHRIIPPLWAKDPPRSGNSKL 162

[Close]
BLAST of CmaCh04G022310 vs. ExPASy Swiss-Prot
Match: Q7XKI7 (Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=MIA40 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-32
Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = 0 

Query: 22  PSPSPVSGCSSESP-------SMESLIAEAAAYGNEANESLEAKANRALECPCIADLRKG 81
           PSP  V    S SP       S+E+L AEA ++  + NES++ K  +AL+CPC+A+L+ G
Sbjct: 15  PSPPAVEAAPSSSPSPAPAPSSLEALAAEAMSFDEDGNESIDVKVQKALDCPCVAELKNG 74

Query: 82  PCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEEEEERE 141
           PCG QF DAF CF KST EEKGSDCV PF+ALQ CIK NP AFSK++L+EEE +EE E+ 
Sbjct: 75  PCGSQFVDAFSCFLKSTEEEKGSDCVKPFIALQDCIKINPEAFSKEILEEEENDEEAEKS 134

Query: 142 KQKAEEPTQDYRIIPPSWSRE 156
             K         +  P+WSRE
Sbjct: 135 NLK---------VRAPAWSRE 146

[Close]
BLAST of CmaCh04G022310 vs. ExPASy Swiss-Prot
Match: Q8N4Q1 (Mitochondrial intermembrane space import and assembly protein 40 OS=Homo sapiens OX=9606 GN=CHCHD4 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-14
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 0 

Query: 33  ESPSMESLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTA 92
           E+PS   L+A+      E +  +    N    CPC+  +  GPCG QF  AF CF  ST 
Sbjct: 21  ETPSSAELVADDPNDPYEEHGLILPNGNINWNCPCLGGMASGPCGEQFKSAFSCFHYSTE 80

Query: 93  EEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEEEEEREKQKAEE 141
           E KGSDCV  F A+Q C++  P     D+  +E+E+EEEEREK+ AE+
Sbjct: 81  EIKGSDCVDQFRAMQECMQKYP-----DLYPQEDEDEEEEREKKPAEQ 123

[Close]
BLAST of CmaCh04G022310 vs. ExPASy Swiss-Prot
Match: Q8VEA4 (Mitochondrial intermembrane space import and assembly protein 40 OS=Mus musculus OX=10090 GN=Chchd4 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 33  ESPSMESLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTA 92
           E+PS   L+A+      E +  +    +    CPC+  +  GPCG QF  AF CF  ST 
Sbjct: 21  ETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMASGPCGEQFKSAFSCFHYSTE 80

Query: 93  EEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEEEEEREKQKAEEPTQDYRI 148
           + KGSDC+  F A+Q C++  P+ + +D      EEEEEE +  +  E T D ++
Sbjct: 81  DIKGSDCIDQFRAMQECMQKYPDLYPQD------EEEEEEAKPVEPVEETADTKV 129

[Close]
BLAST of CmaCh04G022310 vs. ExPASy Swiss-Prot
Match: Q6PBC3 (Mitochondrial intermembrane space import and assembly protein 40 OS=Xenopus tropicalis OX=8364 GN=chchd4 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-11
Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0 

Query: 33  ESPSMESLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTA 92
           E+PS   LIA+      E +  +    +    CPC+  +  GPCG QF  AF CF  S  
Sbjct: 21  ETPSSAELIADDPNDPYEDHGLILPNGDINWNCPCLGGMASGPCGEQFKSAFSCFHYSQE 80

Query: 93  EEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEEEEEREKQKAE 140
           E KGSDC+  F A+Q C++  P     D+  +E++E+E E+EKQ  E
Sbjct: 81  EIKGSDCLDQFRAMQECMQKYP-----DIYPQEDDEDEAEKEKQNKE 122

[Close]
BLAST of CmaCh04G022310 vs. ExPASy TrEMBL
Match: A0A6J1JP76 (mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111487644 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.1e-82
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60
           MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN
Sbjct: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL
Sbjct: 121 VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 163

[Close]
BLAST of CmaCh04G022310 vs. ExPASy TrEMBL
Match: A0A6J1H043 (mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucurbita moschata OX=3662 GN=LOC111458724 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 157/164 (95.73%), Postives = 158/164 (96.34%), Query Frame = 0 

Query: 1   MGQTESV-AAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQTESV AAASS NDLPQSRNPSPSPVSG SSESPSMESLIAEAAAYGNEANESLEAKA
Sbjct: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
           NRALECPCIADLRKGPCGVQFSDAF CFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK
Sbjct: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120

Query: 121 DVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           DVLD  EEEEEEEREKQKAEEPT+DYRIIPPSWSREPQAPKSKL
Sbjct: 121 DVLD--EEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 162

[Close]
BLAST of CmaCh04G022310 vs. ExPASy TrEMBL
Match: A0A6J1CJ21 (mitochondrial intermembrane space import and assembly protein 40 homolog OS=Momordica charantia OX=3673 GN=LOC111011808 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.2e-68
Identity = 139/163 (85.28%), Postives = 149/163 (91.41%), Query Frame = 0 

Query: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60
           MGQ ESVAAAS  NDLPQSRN + +PVS  S + PSM+SLIAEAAAYGNEANESL+AKAN
Sbjct: 1   MGQAESVAAASPPNDLPQSRNSAATPVSSSSRDPPSMDSLIAEAAAYGNEANESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           +LD   EEE+EE+EK+KAEEP +DYRIIPPSWSREPQ PKSKL
Sbjct: 121 ILD---EEEKEEKEKEKAEEPAEDYRIIPPSWSREPQIPKSKL 160

[Close]
BLAST of CmaCh04G022310 vs. ExPASy TrEMBL
Match: A0A1S3CNJ8 (mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo OX=3656 GN=LOC103502941 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.6e-67
Identity = 138/163 (84.66%), Postives = 144/163 (88.34%), Query Frame = 0 

Query: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60
           MGQ ESVAA S  NDLP S NPS SPVSG SS  PSMESLIAEA AYGNE NESL+AKAN
Sbjct: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           +LD    ++EEE+EK K EEPTQDYR+IPPSWSREPQ PKSKL
Sbjct: 121 ILD----DDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 159

[Close]
BLAST of CmaCh04G022310 vs. ExPASy TrEMBL
Match: A0A5A7VG35 (Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00250 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.5e-49
Identity = 99/111 (89.19%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 53  ESLEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKA 112
           +SL+AKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKA
Sbjct: 32  QSLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKA 91

Query: 113 NPNAFSKDVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           NPNAFSKD+LD++EEE+E E+EK K EEPTQDYR+IPPSWSREPQ PKSKL
Sbjct: 92  NPNAFSKDILDDDEEEKEMEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 142

[Close]
BLAST of CmaCh04G022310 vs. NCBI nr
Match: XP_022990891.1 (mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurbita maxima])

HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60
           MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN
Sbjct: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL
Sbjct: 121 VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 163

[Close]
BLAST of CmaCh04G022310 vs. NCBI nr
Match: XP_023529662.1 (mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 4.1e-78
Identity = 160/164 (97.56%), Postives = 161/164 (98.17%), Query Frame = 0 

Query: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60
           MGQTESVAAASS NDLPQSRNPSPSPVSG SSESPSM+SLIAEAAAYGNEANESLEAKAN
Sbjct: 1   MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 VLDEEEEE-EEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           VLDEEEEE EEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL
Sbjct: 121 VLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164

[Close]
BLAST of CmaCh04G022310 vs. NCBI nr
Match: XP_022957285.1 (mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 2.5e-75
Identity = 157/164 (95.73%), Postives = 158/164 (96.34%), Query Frame = 0 

Query: 1   MGQTESV-AAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQTESV AAASS NDLPQSRNPSPSPVSG SSESPSMESLIAEAAAYGNEANESLEAKA
Sbjct: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
           NRALECPCIADLRKGPCGVQFSDAF CFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK
Sbjct: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120

Query: 121 DVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           DVLD  EEEEEEEREKQKAEEPT+DYRIIPPSWSREPQAPKSKL
Sbjct: 121 DVLD--EEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 162

[Close]
BLAST of CmaCh04G022310 vs. NCBI nr
Match: KAG6601970.1 (Mitochondrial intermembrane space import and assembly protein 40-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 156/164 (95.12%), Postives = 157/164 (95.73%), Query Frame = 0 

Query: 1   MGQTESV-AAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQTESV AAASS NDLPQSRNPSPSPVS  SSESPSMESLIAEAAAYGNEANESLEAKA
Sbjct: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSSSSSESPSMESLIAEAAAYGNEANESLEAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
           NRALECPCIADLRKGPCGVQFSDAF CFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK
Sbjct: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120

Query: 121 DVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           DVLD  EEEEEEEREKQKAEEPT+DYRIIPPSWSREPQAPKSKL
Sbjct: 121 DVLD--EEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 162

[Close]
BLAST of CmaCh04G022310 vs. NCBI nr
Match: KAG7032667.1 (Mitochondrial intermembrane space import and assembly protein 40-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.0 bits (720), Expect = 3.4e-72
Identity = 157/180 (87.22%), Postives = 158/180 (87.78%), Query Frame = 0 

Query: 1   MGQTESV-AAASSTNDLPQSRNPSPSPVSGCSSESPSMESLI----------------AE 60
           MGQTESV AAASS NDLPQSRNPSPSPVSG SSESPSMESLI                AE
Sbjct: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIADLRTCLIINNVVVIRAE 60

Query: 61  AAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPF 120
           AAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAF CFFKSTAEEKGSDCVHPF
Sbjct: 61  AAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPF 120

Query: 121 VALQSCIKANPNAFSKDVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164
           VALQSCIKANPNAFSKDVLD  EEEEEEEREKQKAEEPT+DYRIIPPSWSREPQAPKSKL
Sbjct: 121 VALQSCIKANPNAFSKDVLD--EEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 178

[Close]
BLAST of CmaCh04G022310 vs. TAIR 10
Match: AT5G23395.1 (Cox19-like CHCH family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-42
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 0 

Query: 1   MGQTE----SVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNE--ANES 60
           MGQ +    S+   ++TN  P S N   SP     + SPSM+SL+AEAAAYG +   NES
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSAN---SPRDSEDTSSPSMDSLLAEAAAYGEDDNENES 60

Query: 61  LEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANP 120
           LEAKA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGSDCV+PFVALQSCI ANP
Sbjct: 61  LEAKAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANP 120

Query: 121 NAFSKDVLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSRE-PQAPKSKL 164
           +AFSK V  +E+E E++E      + P QD+RIIPP W+++ P++  SKL
Sbjct: 121 DAFSKSVTGDEKETEKKEE-----QPPVQDHRIIPPLWAKDPPRSGNSKL 162

The following BLAST results are available for this feature:
BLAST of CmaCh04G022310 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GYJ43.2e-4158.82Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Arab... [more]
Q7XKI74.6e-3251.77Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Oryz... [more]
Q8N4Q15.7e-1442.59Mitochondrial intermembrane space import and assembly protein 40 OS=Homo sapiens... [more]
Q8VEA42.0e-1135.65Mitochondrial intermembrane space import and assembly protein 40 OS=Mus musculus... [more]
Q6PBC33.4e-1138.32Mitochondrial intermembrane space import and assembly protein 40 OS=Xenopus trop... [more]
BLAST of CmaCh04G022310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JP765.1e-82100.00mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucu... [more]
A0A6J1H0431.2e-7595.73mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucu... [more]
A0A6J1CJ214.2e-6885.28mitochondrial intermembrane space import and assembly protein 40 homolog OS=Momo... [more]
A0A1S3CNJ84.6e-6784.66mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo... [more]
A0A5A7VG351.5e-4989.19Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo... [more]
BLAST of CmaCh04G022310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022990891.11.0e-81100.00mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurb... [more]
XP_023529662.14.1e-7897.56mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurb... [more]
XP_022957285.12.5e-7595.73mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurb... [more]
KAG6601970.11.2e-7495.12Mitochondrial intermembrane space import and assembly protein 40-like protein, p... [more]
KAG7032667.13.4e-7287.22Mitochondrial intermembrane space import and assembly protein 40-like protein [C... [more]
BLAST of CmaCh04G022310 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G23395.12.3e-4258.82Cox19-like CHCH family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..139
NoneNo IPR availableGENE3D1.10.287.2900coord: 45..122
e-value: 6.8E-24
score: 85.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..163
NoneNo IPR availablePANTHERPTHR21622:SF0AU015836 PROTEIN-RELATEDcoord: 9..157
IPR039289Mitochondrial intermembrane space import and assembly protein 40PANTHERPTHR21622COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4coord: 9..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G022310.1CmaCh04G022310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045041 protein import into mitochondrial intermembrane space
biological_process GO:0022417 protein maturation by protein folding
biological_process GO:0006625 protein targeting to peroxisome
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0005777 peroxisome
molecular_function GO:0015035 protein-disulfide reductase activity