CmaCh04G022120 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGTTCTAATGTAATCCTTTGGTTGATCATGAGAATGAAAGTAATTTGTCAGATTTCTCTGTCTTTGATTTCTATGTTACAGTTTAGGTAACAATTTGACCTTTGTAATTTAAAATTTGTAATAATTTGATATCTATTGATAGAAATACTATTAACATACCACGGAATTAGGGATCAAATATTTTAAACTACGAAGACTCGATTTTTTATTGATAAAAGTTGATGTTTTATTTTGATATTATCTGTGACTAAAAAACTAAGACTTCGAAGATGAATTAGAACACGAAAATGTAATAGTCGAAGTCCTCCACCAATAGATATGGGATCTCATAATCCACTCTCTTTATCAAGAATGTTTCATTTCTCTTTTCAACTGACGTGGATCTCATAATTCACTCCCCTTGGAGGCCAGCGTTCTCGCTAACACATCACTCAGTGTCTAGCTTGTATACCATTTGTAACAGTTAAAACCCACCACTAGCAGATATTATCCGTTTTGGCTCATTACATGTCGCCGCCAGCCTCACGATTTTAAAACGCATCGACTTAAGAAAATTTTTCACACTCATACAACTGTGTCCTAACTGAAATTATTAATATCACTCTCCTTGGAGGCCAGCGTTTACGCTGACACATTGCTTAGTGTCTGACTCATATACCATTTGTAACAGTTAAAATCTACCACTATCATATATTATCTGTTTTGGCTCATTACATATCGCTGTCAGTCTCATGATTTTAAAACGCATTGGATTGAGAAAATTTTTCACACACTTGTAAGGAATAAGGAATAAGGAATGAGAGACAGACATTGTTGCAAGAGCAAAGTCACAAATGAACCTCATACGGAGAAATGGCTGAGTCCTAACTGAAATGGTTAATATCCAAGAAGGAAATGTGGAATAGGTCCCAGTTCTACAAGTTCTCTTCTAAATCATGGTTTCATGCAAGAGCAGCAGCAAGGAGTGTTTGCTTCTTAATTTAAAAAGAAACTCATGATTTAGAAAGCCTCATTTACTCTACAAAAAGGCAACCGACTACTGGACAAGAGGATAGGATTTGAACTGAAAGTTTCATCATAAGCTGTTCTCCCAGTATCCTGTTCTTTCCAAATTCTACCAGTCACCCTAAGCTTCAGTTCCTTACGGTCTCCACCGGAGAAGAAGAGAGCCATGTTACATTGGATAATGAGCCCGTCGAAACTATCCCGAACTTTTCGATGGCTGTCCCTGATGCTTCTGGGCACCCCTTGCCATACTATCTTCCTCCCATTTCCTCCCACTTCGAGACTATAGCTGTAGTTCTTTGCATCATCATCATCGCCCATGAACCGCAAGAATGCTATGTATGCTGGAGCCATTCCGAGCTGGAAAGCTTCGAAATGCAGGCAAAA ATGTGTGTTCTAATTCACCCTAAGCTTCAGTTCCTTACGGTCTCCACCGGAGAAGAAGAGAGCCATGTTACATTGGATAATGAGCCCGTCGAAACTATCCCGAACTTTTCGATGGCTGTCCCTGATGCTTCTGGGCACCCCTTGCCATACTATCTTCCTCCCATTTCCTCCCACTTCGAGACTATAGCTGTAGTTCTTTGCATCATCATCATCGCCCATGAACCGCAAGAATGCTATGTATGCTGGAGCCATTCCGAGCTGGAAAGCTTCGAAATGCAGGCAAAA ATGTGTGTTCTAATTCACCCTAAGCTTCAGTTCCTTACGGTCTCCACCGGAGAAGAAGAGAGCCATGTTACATTGGATAATGAGCCCGTCGAAACTATCCCGAACTTTTCGATGGCTGTCCCTGATGCTTCTGGGCACCCCTTGCCATACTATCTTCCTCCCATTTCCTCCCACTTCGAGACTATAGCTGTAGTTCTTTGCATCATCATCATCGCCCATGAACCGCAAGAATGCTATGTATGCTGGAGCCATTCCGAGCTGGAAAGCTTCGAAATGCAGGCAAAA MCVLIHPKLQFLTVSTGEEESHVTLDNEPVETIPNFSMAVPDASGHPLPYYLPPISSHFETIAVVLCIIIIAHEPQECYVCWSHSELESFEMQAK Homology
BLAST of CmaCh04G022120 vs. ExPASy TrEMBL
Match: A0A7J6HPJ6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_028973 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of CmaCh04G022120 vs. ExPASy TrEMBL
Match: A0A7J6HG47 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023204 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of CmaCh04G022120 vs. ExPASy TrEMBL
Match: A0A5A7QNC9 (Pepsin A-4 OS=Striga asiatica OX=4170 GN=STAS_23370 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 8.5e-13 Identity = 33/70 (47.14%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of CmaCh04G022120 vs. ExPASy TrEMBL
Match: A0A5A7QPF5 (Semaphorin-6D OS=Striga asiatica OX=4170 GN=STAS_23368 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12 Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of CmaCh04G022120 vs. ExPASy TrEMBL
Match: A0A5A7NXG4 (Coiled-coil domain-containing protein 92 OS=Striga asiatica OX=4170 GN=STAS_00754 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10 Identity = 34/88 (38.64%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of CmaCh04G022120 vs. NCBI nr
Match: KAF4393400.1 (hypothetical protein F8388_023204 [Cannabis sativa]) HSP 1 Score: 115.2 bits (287), Expect = 3.2e-22 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of CmaCh04G022120 vs. NCBI nr
Match: KAF4396659.1 (hypothetical protein G4B88_028973 [Cannabis sativa]) HSP 1 Score: 115.2 bits (287), Expect = 3.2e-22 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of CmaCh04G022120 vs. NCBI nr
Match: GER46332.1 (pepsin A-4 [Striga asiatica]) HSP 1 Score: 82.8 bits (203), Expect = 1.7e-12 Identity = 33/70 (47.14%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of CmaCh04G022120 vs. NCBI nr
Match: GER46337.1 (semaphorin-6D [Striga asiatica]) HSP 1 Score: 81.3 bits (199), Expect = 5.1e-12 Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of CmaCh04G022120 vs. NCBI nr
Match: GER25179.1 (coiled-coil domain-containing protein 92 [Striga asiatica]) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10 Identity = 34/88 (38.64%), Postives = 63/88 (71.59%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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