CmaCh04G021970 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G021970
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTwo-component response regulator
LocationCma_Chr04: 15337097 .. 15338436 (+)
RNA-Seq ExpressionCmaCh04G021970
SyntenyCmaCh04G021970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAACGAACACTCTGATTTGGCAAAATCAATTAAACAATTGGTCAAGAGTCGCCCCCGTCTAAACCAAATCAACCTTGAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCGCTTTCCAACTGTCACATTCCAAGATTTTCCCCCCTCCATCGAATCGATCTTCCCTCCTTCCATCCATAGATATAAAACTCCTTCGATCCGTTCTCCTTCGTATCGGTTCTCTATTCGATCTTCTTCTCCAATTCCATTTCTCTGTCGCTGAAGAATCGCGTTTCTACCAGCTATGGGTGTTGCTGTGGCTGTTGATGTTGAAACCACTCGGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCAAAACCTCCTCCTATCACGGTATTAATCGCTCCTTCCTTTTTCTGTTCACGATTGGATGTTTTTTTTCTTCTTCGATTCACGACTAATCGATGTTTGTTGTTCTGTTTTTCATTAGTCACCGCTGTTGATTCCGGTACCAAGGCCTTGGAATTTCTCGGTCTTGTTGAAGATCCTGATCTCGATGATGATGTTGATGATGAACAACACTCCAAACTCCCCCCCTCAATTCAAGTATGTAGCCCTAATTTTCCCTCTTGCCTCGAGATTTTTGTTCATTTTTGTTTCTTCTGTCTCTAACTTGTTTGATAATTTCTGTTTTCAGGAAGTGGATGTGAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCAGGAAGATCAAGGTTTGCCCTAATTTGTTTTCCTCCTTCCGATTCTACAGAGCAATCCAAAGAATCGAATCCACCGAGAATCAATAACTAATTCGTGCGATAAAATTGCAGGAATCGAAATCTCTTAAAGACATACCAGTTGTGATCATGTCCTCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCCGATGTGAGGAAACTGAGACCTCATTTGATTAAAGAAAAATCCACAAGGAATTGATGAAGAAGAAGAAGATGAACAACTCCTGAACTAATTTTAATTTTGATTTTAGTGATTCTGTAAAGAATTAGATCCCAAACTGACTACCATTAGCAAATTCTACACACAAATTTTCTCGGGAAACTAACAGAAAATCAAAGAATGTATAGATCTACTGCTCATTTTTGTCTCTGAGGATTTGATTTATGAAGTAATTTTTTGTTTCCTCTCTCTTTTCTCTTTGAATTATCATTGAGAATCATCGTAAGAACAATCAAAATTGTTCATCCCCAG

mRNA sequence

AATCAACGAACACTCTGATTTGGCAAAATCAATTAAACAATTGGTCAAGAGTCGCCCCCGTCTAAACCAAATCAACCTTGAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCGCTTTCCAACTGTCACATTCCAAGATTTTCCCCCCTCCATCGAATCGATCTTCCCTCCTTCCATCCATAGATATAAAACTCCTTCGATCCGTTCTCCTTCGTATCGGTTCTCTATTCGATCTTCTTCTCCAATTCCATTTCTCTGTCGCTGAAGAATCGCGTTTCTACCAGCTATGGGTGTTGCTGTGGCTGTTGATGTTGAAACCACTCGGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCAAAACCTCCTCCTATCACGTCACCGCTGTTGATTCCGGTACCAAGGCCTTGGAATTTCTCGGTCTTGTTGAAGATCCTGATCTCGATGATGATGTTGATGATGAACAACACTCCAAACTCCCCCCCTCAATTCAAGAAGTGGATGTGAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTTGTGATCATGTCCTCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCCGATGTGAGGAAACTGAGACCTCATTTGATTAAAGAAAAATCCACAAGGAATTGATGAAGAAGAAGAAGATGAACAACTCCTGAACTAATTTTAATTTTGATTTTAGTGATTCTGTAAAGAATTAGATCCCAAACTGACTACCATTAGCAAATTCTACACACAAATTTTCTCGGGAAACTAACAGAAAATCAAAGAATGTATAGATCTACTGCTCATTTTTGTCTCTGAGGATTTGATTTATGAAGTAATTTTTTGTTTCCTCTCTCTTTTCTCTTTGAATTATCATTGAGAATCATCGTAAGAACAATCAAAATTGTTCATCCCCAG

Coding sequence (CDS)

ATGGGTGTTGCTGTGGCTGTTGATGTTGAAACCACTCGGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCAAAACCTCCTCCTATCACGTCACCGCTGTTGATTCCGGTACCAAGGCCTTGGAATTTCTCGGTCTTGTTGAAGATCCTGATCTCGATGATGATGTTGATGATGAACAACACTCCAAACTCCCCCCCTCAATTCAAGAAGTGGATGTGAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTTGTGATCATGTCCTCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCCGATGTGAGGAAACTGAGACCTCATTTGATTAAAGAAAAATCCACAAGGAATTGA

Protein sequence

MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Homology
[Close]
BLAST of CmaCh04G021970 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-50
Identity = 105/152 (69.08%), Postives = 122/152 (80.26%), Query Frame = 0 

Query: 7   VDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVD 66
           VD E +RFHVLAVDDS IDRKLIE LLK SSY VT VDSG+KALE LGL +    + D  
Sbjct: 4   VDAE-SRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRD----EGDDS 63

Query: 67  DEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRI 126
               S   P  QE+DVNLIITDY MPGM+GYDLL+++K S SLKDIPVVIMSSENVP+RI
Sbjct: 64  SSSPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 123

Query: 127 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 159
           NRCLE+GAEEFFLKPV+L+D++KL+ HL+K K
Sbjct: 124 NRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]
BLAST of CmaCh04G021970 vs. ExPASy Swiss-Prot
Match: Q942A1 (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 GN=RR4 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-50
Identity = 105/152 (69.08%), Postives = 122/152 (80.26%), Query Frame = 0 

Query: 7   VDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVD 66
           VD E +RFHVLAVDDS IDRKLIE LLK SSY VT VDSG+KALE LGL +    + D  
Sbjct: 4   VDAE-SRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRD----EGDDS 63

Query: 67  DEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRI 126
               S   P  QE+DVNLIITDY MPGM+GYDLL+++K S SLKDIPVVIMSSENVP+RI
Sbjct: 64  SSSPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 123

Query: 127 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 159
           NRCLE+GAEEFFLKPV+L+D++KL+ HL+K K
Sbjct: 124 NRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]
BLAST of CmaCh04G021970 vs. ExPASy Swiss-Prot
Match: O80366 (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-49
Identity = 100/147 (68.03%), Postives = 121/147 (82.31%), Query Frame = 0 

Query: 12  TRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVDDEQHS 71
           ++FHVLAVDDS  DRKLIERLL+ SS  VT VDSG+KALEFLGL +  D +   D    S
Sbjct: 7   SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSN---DPNAFS 66

Query: 72  KLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLE 131
           K P + Q V+VNLIITDY MPGM+GYDLL+K+KES + +DIPVVIMSSENVP+RI+RCLE
Sbjct: 67  KAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLE 126

Query: 132 EGAEEFFLKPVQLSDVRKLRPHLIKEK 159
           EGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 127 EGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]
BLAST of CmaCh04G021970 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-49
Identity = 104/156 (66.67%), Postives = 123/156 (78.85%), Query Frame = 0 

Query: 3   VAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLD 62
           +AVA++     FHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL +  D  
Sbjct: 1   MAVAIEAP---FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSP 60

Query: 63  DDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 122
                +Q        QEV VNLIITDY MPGM+GYDLL+KIKES  L+DIPVVIMSS+N+
Sbjct: 61  ISTQSDQ--------QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNI 120

Query: 123 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 159
           PSRINRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 PSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of CmaCh04G021970 vs. ExPASy Swiss-Prot
Match: Q2QXY3 (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 GN=RR10 PE=2 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-49
Identity = 104/156 (66.67%), Postives = 123/156 (78.85%), Query Frame = 0 

Query: 3   VAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLD 62
           +AVA++     FHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL +  D  
Sbjct: 1   MAVAIEAP---FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSP 60

Query: 63  DDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 122
                +Q        QEV VNLIITDY MPGM+GYDLL+KIKES  L+DIPVVIMSS+N+
Sbjct: 61  ISTQSDQ--------QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNI 120

Query: 123 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 159
           PSRINRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 PSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of CmaCh04G021970 vs. ExPASy TrEMBL
Match: A0A6J1JQG8 (two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111486903 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.6e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120
           LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

Query: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 162

[Close]
BLAST of CmaCh04G021970 vs. ExPASy TrEMBL
Match: A0A6J1GPD5 (two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC111456248 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.6e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120
           LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

Query: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 162

[Close]
BLAST of CmaCh04G021970 vs. ExPASy TrEMBL
Match: A0A6J1FFG9 (two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC111445004 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 144/164 (87.80%), Postives = 148/164 (90.24%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVA    VE+T+FHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGLV D D
Sbjct: 1   MGVA----VESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHD 60

Query: 61  LDDDVDDEQHSKLPPS--IQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120
            DDD DDE  S++ PS   QEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS
Sbjct: 61  DDDDDDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120

Query: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 160

[Close]
BLAST of CmaCh04G021970 vs. ExPASy TrEMBL
Match: A0A6J1K3C0 (two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111489700 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.9e-65
Identity = 143/164 (87.20%), Postives = 147/164 (89.63%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVA    VE+T+FHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGL  D D
Sbjct: 1   MGVA----VESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGL--DGD 60

Query: 61  LDDDVDDEQHSKLPPS--IQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120
            DDD DDE  S++ PS   QEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS
Sbjct: 61  HDDD-DDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120

Query: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157

[Close]
BLAST of CmaCh04G021970 vs. ExPASy TrEMBL
Match: A0A5D3BEM3 (Two-component response regulator ORR10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00940 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.0e-63
Identity = 135/161 (83.85%), Postives = 141/161 (87.58%), Query Frame = 0 

Query: 5   VAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDD 64
           + V +E+T FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLV+D D   D
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTD 60

Query: 65  VDDEQHSKLPPS---IQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSEN 124
                 SK+ P     QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSEN
Sbjct: 61  ------SKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSEN 120

Query: 125 VPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           VPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKST N
Sbjct: 121 VPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 155

[Close]
BLAST of CmaCh04G021970 vs. NCBI nr
Match: XP_022953837.1 (two-component response regulator ORR4-like [Cucurbita moschata] >XP_022989834.1 two-component response regulator ORR4-like [Cucurbita maxima] >XP_023517916.1 two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo] >KAG6601939.1 Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.0 bits (811), Expect = 9.4e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120
           LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

Query: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 162

[Close]
BLAST of CmaCh04G021970 vs. NCBI nr
Match: KAG7032635.1 (Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.5 bits (763), Expect = 3.5e-77
Identity = 157/162 (96.91%), Postives = 157/162 (96.91%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVA    VETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD
Sbjct: 1   MGVA----VETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120
           LDDD DDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE
Sbjct: 61  LDDD-DDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

Query: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157

[Close]
BLAST of CmaCh04G021970 vs. NCBI nr
Match: XP_022938947.1 (two-component response regulator ORR4-like [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 8.5e-68
Identity = 144/164 (87.80%), Postives = 148/164 (90.24%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVA    VE+T+FHVLAVDDSFIDRKLIERLLKTSSYHVT VDSG KALEFLGLV D D
Sbjct: 1   MGVA----VESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHD 60

Query: 61  LDDDVDDEQHSKLPPS--IQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120
            DDD DDE  S++ PS   QEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS
Sbjct: 61  DDDDDDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120

Query: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 160

[Close]
BLAST of CmaCh04G021970 vs. NCBI nr
Match: KAG7016647.1 (Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65
Identity = 142/164 (86.59%), Postives = 147/164 (89.63%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVA    VE+TRFHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG KALEFLGLV D  
Sbjct: 1   MGVA----VESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDH- 60

Query: 61  LDDDVDDEQHSKLPPS--IQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120
            DDD DDE  S++ PS   QEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS
Sbjct: 61  -DDDDDDEPDSQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120

Query: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+RN
Sbjct: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 158

[Close]
BLAST of CmaCh04G021970 vs. NCBI nr
Match: KAG6579124.1 (Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 142/164 (86.59%), Postives = 146/164 (89.02%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           MGVA    VE+TRFHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG KALEFLGLV D  
Sbjct: 1   MGVA----VESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGD-- 60

Query: 61  LDDDVDDEQHSKLPPS--IQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120
             DD DDE  S++ PS   QEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS
Sbjct: 61  -HDDDDDEPDSQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMS 120

Query: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN
Sbjct: 121 SENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157

[Close]
BLAST of CmaCh04G021970 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-50
Identity = 100/147 (68.03%), Postives = 121/147 (82.31%), Query Frame = 0 

Query: 12  TRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVDDEQHS 71
           ++FHVLAVDDS  DRKLIERLL+ SS  VT VDSG+KALEFLGL +  D +   D    S
Sbjct: 7   SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSN---DPNAFS 66

Query: 72  KLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLE 131
           K P + Q V+VNLIITDY MPGM+GYDLL+K+KES + +DIPVVIMSSENVP+RI+RCLE
Sbjct: 67  KAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLE 126

Query: 132 EGAEEFFLKPVQLSDVRKLRPHLIKEK 159
           EGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 127 EGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]
BLAST of CmaCh04G021970 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-49
Identity = 98/147 (66.67%), Postives = 118/147 (80.27%), Query Frame = 0 

Query: 12  TRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVDDEQHS 71
           ++FHVLAVDDS  DRK+IERLL+ SS  VT VDSG+KALEFLGL       DD D    S
Sbjct: 7   SKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGL-----RVDDNDPNALS 66

Query: 72  KLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLE 131
             P   QEV++NLIITDY MPGM+GYDLL+K+KES + + IPVVIMSSENVP+RI+RCLE
Sbjct: 67  TSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLE 126

Query: 132 EGAEEFFLKPVQLSDVRKLRPHLIKEK 159
           EGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 127 EGAEEFFLKPVKLADLTKLKPHMMKTK 148

[Close]
BLAST of CmaCh04G021970 vs. TAIR 10
Match: AT3G48100.1 (response regulator 5 )

HSP 1 Score: 164.9 bits (416), Expect = 5.6e-41
Identity = 86/150 (57.33%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 15  HVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVDDEQHSKLP 74
           HVLAVDDS +DRK IERLL+ SS  VT VDS T+AL++LGL          D E +S + 
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL----------DGENNSSV- 85

Query: 75  PSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGA 134
              +++ +NLI+TDYSMPGM+GY+LL+KIKES + ++IPVVIMSSEN+  RI+RCLEEGA
Sbjct: 86  -GFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGA 145

Query: 135 EEFFLKPVQLSDVRKLRPHLIK--EKSTRN 163
           E+F LKPV+L+DV++LR  L+K  E++ +N
Sbjct: 146 EDFLLKPVKLADVKRLRDSLMKAEERAFKN 163

[Close]
BLAST of CmaCh04G021970 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 164.1 bits (414), Expect = 9.5e-41
Identity = 87/149 (58.39%), Postives = 113/149 (75.84%), Query Frame = 0 

Query: 9   VETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDVDDE 68
           +++ + HVLAVDDS +DR +IERLL+ +S  VTAVDSG +ALEFLG      LDDD    
Sbjct: 28  LDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLG------LDDD---- 87

Query: 69  QHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINR 128
              K       + V+LIITDY MPGM+GY+LL+KIKES S K++PVVIMSSENV +RI+R
Sbjct: 88  ---KAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDR 147

Query: 129 CLEEGAEEFFLKPVQLSDVRKLRPHLIKE 158
           CLEEGAE+F LKPV+L+DV++LR +L ++
Sbjct: 148 CLEEGAEDFLLKPVKLADVKRLRSYLTRD 163

[Close]
BLAST of CmaCh04G021970 vs. TAIR 10
Match: AT1G10470.1 (response regulator 4 )

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-40
Identity = 85/162 (52.47%), Postives = 113/162 (69.75%), Query Frame = 0 

Query: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60
           +G   +  ++    HVLAVDDS +DR +IERLL+ +S  VTAVDSG +ALEFLGL     
Sbjct: 21  IGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL----- 80

Query: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120
                    + K       + V+LIITDY MPGM+GY+LL+KIKES + +++PVVIMSSE
Sbjct: 81  --------DNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSE 140

Query: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 163
           NV +RI+RCLEEGA++F LKPV+L+DV++LR HL K+    N
Sbjct: 141 NVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTKDVKLSN 169

The following BLAST results are available for this feature:
BLAST of CmaCh04G021970 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4GZK71.3e-5069.08Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
Q942A11.3e-5069.08Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
O803661.9e-4968.03Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE... [more]
B8BLZ43.2e-4966.67Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN... [more]
Q2QXY33.2e-4966.67Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
BLAST of CmaCh04G021970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JQG84.6e-83100.00two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GPD54.6e-83100.00two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1FFG94.1e-6887.80two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1K3C01.9e-6587.20two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A5D3BEM34.0e-6383.85Two-component response regulator ORR10-like OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of CmaCh04G021970 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953837.19.4e-83100.00two-component response regulator ORR4-like [Cucurbita moschata] >XP_022989834.1 ... [more]
KAG7032635.13.5e-7796.91Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_022938947.18.5e-6887.80two-component response regulator ORR4-like [Cucurbita moschata][more]
KAG7016647.11.4e-6586.59Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperm... [more]
KAG6579124.11.8e-6586.59Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. so... [more]
BLAST of CmaCh04G021970 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57040.11.3e-5068.03response regulator 9 [more]
AT2G41310.17.2e-4966.67response regulator 3 [more]
AT3G48100.15.6e-4157.33response regulator 5 [more]
AT1G59940.19.5e-4158.39response regulator 3 [more]
AT1G10470.12.1e-4052.47response regulator 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 14..151
e-value: 9.9E-17
score: 71.6
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 77..149
e-value: 4.9E-16
score: 58.9
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 15..155
score: 34.058235
NoneNo IPR availableGENE3D3.40.50.2300coord: 15..161
e-value: 3.4E-32
score: 114.4
NoneNo IPR availablePIRSRPIRSR002937-1PIRSR002937-1coord: 77..148
e-value: 6.7E-6
score: 23.2
coord: 16..53
e-value: 330.0
score: -2.0
NoneNo IPR availablePANTHERPTHR43874TWO-COMPONENT RESPONSE REGULATORcoord: 8..160
NoneNo IPR availablePANTHERPTHR43874:SF140RESPONSE REGULATOR ARR8, PUTATIVE-RELATEDcoord: 8..160
NoneNo IPR availableCDDcd17581REC_typeA_ARRcoord: 16..150
e-value: 3.70444E-72
score: 211.07
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 13..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G021970.1CmaCh04G021970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity