CmaCh04G021450 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGCACTTGAGCGGGTCTCTTCTCTCAGTTTGTGATTATCAATATTGGGTTTCATTTTGAATAATAATAATAATAATAATAGAGTCCAAAAATTCAACCAAAGTAATGGGTTTTCCATTCCGATTCTGTAACTTTACACCATATCTTCCATCCCACCATAATCTGATTATTGGGTTTCGTTTTGAATAATGGAACACTCCAAAAATTCAACTAAAATAATGGGTTTTTTCATTCTGATTCTCTAACTTTACACCATATCTTCCATCCCACCACAACCCCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCGCCCATTTATTTCATCTGTCGAATCTTACCCACACCATAACCAGTAAAGGCTATGGAAACCCACCTCCCTCCTCTCTGCCTCTTACCGCTTCCTCACTCTGCGTCTCACTGCCGCTGCCATAGCCTTCAACGCATAGATTAACGCTCAAGGCCTCTCCTGATTCTTCAATAAACCCATGTATGTCACACTAGATGTGAATCCCTTCTTGTTTTTCTTATGTTTTTGCTTGATTTTAATGTTGCCCTCTTCTTTGCTTCTGCTCTGCTTTCTTCTGGGTCTGTTTTTGAATGATGATGAGATGAAATTTATGCTTTCTGGGTTATGATTAGTCGCTCTTTTTGGTTCTTTTCTTGGAATTTTTCTGGGGTTTTCCCCTTATGGGTCTGATTTTACTCTTTTTCACTGAATGAATCTGCTTCTATGATACCTGATGTTGTGACCATGTGCTTGCTTAGTTGCTCTGGGTTATAATTTGTGTTTGAATTCATGGAGGAAGTTTCCATGAATCTAGGTTTATGTAGGCGTAAGATTTGTGAAATTGTAGTTTGGGATGAACAGATATATATGCTAATCTTAAGCTTAGCTTCTTAATATCAAGTTCTGGTAGAACAGCTGCTGAAGTGTTGAGGGCTTGTGGCCTTTTTCATGGATTCATAGCCAAAGATTGATCATGTATTAGGGCTCATTATCTCTTATCAAAAAAAATGTATTAGGGCTCATTATCATAAACTTTTAGGAATAATGTCATGTTCTTGAACGTTCTTTTCCATTATTGTGCAATGCAGAAGCAACATTAACTTATTTGATTGTTCTTGTAATTCTTAAAACAGAAGGAAAAGAAGGGAATCTCTGTGTTTGGAAGCCTCTGGTTCTTAACTTTTTTGGACAATTCATTGGAATAATGGAAACTTTAGATTTCAATATTGAAGCTGCTAAAGATTCAGAGCCTAGCAGTAGTCAAGAAGCAAATCCTGATCACTCTAACACTGGCACTGCCAGTTCTTCCTGCCCTCCAAGCTCGAGTAAAGTTGCTGTTGCTGATGCAGTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAACGATATCGAATCAAAGGGTGATGGTGATGGTGAGAATCACAGGGAAACAAATGGTAACAAATCGTCATCTGCATCGACGCCGAGAGTTTTCTCTTGCAATTACTGTCGACGTAAGTTCTTCAGCTCGCAGGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACTCGGATGGGAATGTTCTTCGATCGATACGGTAGCTTGGCATCGCTGCCTCTTCATGGCTCAGCTCTTAGATCACTCGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCACAGGCCTTATCCTGGTAGGAGCGTTGGAGCAAAGTTCGAGCATAGCGCTTTCGGGTTCCCGACATTCGTTCAGGAATACGAGGATGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAATCCACAGTTCAAATTTCGGATTCAGAGTTTGGGAAGACAATTCCTCCTCCACCAAGAACAGAAGAATCATCTCCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCATTTTGATGCCTTCTTCTTAATGTATCAACTTCTGTAAAGTGGGATGTGTCTGCCATTGTCTGCCATTTTTTTAGTGGCTCTAAGCTTATGAATTGTTGAATAAATCTTCAAATTTTTTCTTTTTGTGCCAATTACCCTTGTCCTAATCTAAAATACACTTTTTTGATCCTTTACCCCCCTTTTTCTTTGCAATTTTTGTCCATGAATTCCAAAAGTTTCTATTCTAATCTCGAATCG ATGATGGCACTTGAGCGGCCTTCAACGCATAGATTAACGCTCAAGGCCTCTCCTGATTCTTCAATAAACCCATAAGGAAAAGAAGGGAATCTCTGTGTTTGGAAGCCTCTGGTTCTTAACTTTTTTGGACAATTCATTGGAATAATGGAAACTTTAGATTTCAATATTGAAGCTGCTAAAGATTCAGAGCCTAGCAGTAGTCAAGAAGCAAATCCTGATCACTCTAACACTGGCACTGCCAGTTCTTCCTGCCCTCCAAGCTCGAGTAAAGTTGCTGTTGCTGATGCAGTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAACGATATCGAATCAAAGGGTGATGGTGATGGTGAGAATCACAGGGAAACAAATGGTAACAAATCGTCATCTGCATCGACGCCGAGAGTTTTCTCTTGCAATTACTGTCGACGTAAGTTCTTCAGCTCGCAGGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACTCGGATGGGAATGTTCTTCGATCGATACGGTAGCTTGGCATCGCTGCCTCTTCATGGCTCAGCTCTTAGATCACTCGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCACAGGCCTTATCCTGGTAGGAGCGTTGGAGCAAAGTTCGAGCATAGCGCTTTCGGGTTCCCGACATTCGTTCAGGAATACGAGGATGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAATCCACAGTTCAAATTTCGGATTCAGAGTTTGGGAAGACAATTCCTCCTCCACCAAGAACAGAAGAATCATCTCCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCATTTTGATGCCTTCTTCTTAATGTATCAACTTCTGTAAAGTGGGATGTGTCTGCCATTGTCTGCCATTTTTTTAGTGGCTCTAAGCTTATGAATTGTTGAATAAATCTTCAAATTTTTTCTTTTTGTGCCAATTACCCTTGTCCTAATCTAAAATACACTTTTTTGATCCTTTACCCCCCTTTTTCTTTGCAATTTTTGTCCATGAATTCCAAAAGTTTCTATTCTAATCTCGAATCG ATGGAAACTTTAGATTTCAATATTGAAGCTGCTAAAGATTCAGAGCCTAGCAGTAGTCAAGAAGCAAATCCTGATCACTCTAACACTGGCACTGCCAGTTCTTCCTGCCCTCCAAGCTCGAGTAAAGTTGCTGTTGCTGATGCAGTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAACGATATCGAATCAAAGGGTGATGGTGATGGTGAGAATCACAGGGAAACAAATGGTAACAAATCGTCATCTGCATCGACGCCGAGAGTTTTCTCTTGCAATTACTGTCGACGTAAGTTCTTCAGCTCGCAGGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACTCGGATGGGAATGTTCTTCGATCGATACGGTAGCTTGGCATCGCTGCCTCTTCATGGCTCAGCTCTTAGATCACTCGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCACAGGCCTTATCCTGGTAGGAGCGTTGGAGCAAAGTTCGAGCATAGCGCTTTCGGGTTCCCGACATTCGTTCAGGAATACGAGGATGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAATCCACAGTTCAAATTTCGGATTCAGAGTTTGGGAAGACAATTCCTCCTCCACCAAGAACAGAAGAATCATCTCCTGATCTCACTTTGAGGCTTTAG METLDFNIEAAKDSEPSSSQEANPDHSNTGTASSSCPPSSSKVAVADAVPISLDLTLQFNSNDIESKGDGDGENHRETNGNKSSSASTPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAKFEHSAFGFPTFVQEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPPRTEESSPDLTLRL Homology
BLAST of CmaCh04G021450 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26 Identity = 97/263 (36.88%), Postives = 132/263 (50.19%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22 Identity = 82/217 (37.79%), Postives = 107/217 (49.31%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16 Identity = 56/124 (45.16%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.2e-12 Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy TrEMBL
Match: A0A6J1JQ26 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111487865 PE=4 SV=1) HSP 1 Score: 494.2 bits (1271), Expect = 3.2e-136 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy TrEMBL
Match: A0A6J1E2E8 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430156 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy TrEMBL
Match: A0A0A0KPA2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G548160 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.4e-110 Identity = 209/251 (83.27%), Postives = 225/251 (89.64%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy TrEMBL
Match: A0A5D3E1W6 (Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold857G00040 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.8e-110 Identity = 208/251 (82.87%), Postives = 227/251 (90.44%), Query Frame = 0
BLAST of CmaCh04G021450 vs. ExPASy TrEMBL
Match: A0A1S3CTQ8 (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103504366 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.5e-109 Identity = 207/251 (82.47%), Postives = 226/251 (90.04%), Query Frame = 0
BLAST of CmaCh04G021450 vs. NCBI nr
Match: XP_022991196.1 (zinc finger protein 7-like [Cucurbita maxima]) HSP 1 Score: 494.2 bits (1271), Expect = 6.7e-136 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CmaCh04G021450 vs. NCBI nr
Match: KAG6601893.1 (Zinc finger protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 485.3 bits (1248), Expect = 3.1e-133 Identity = 249/253 (98.42%), Postives = 250/253 (98.81%), Query Frame = 0
BLAST of CmaCh04G021450 vs. NCBI nr
Match: XP_022922104.1 (zinc finger protein 4-like [Cucurbita moschata]) HSP 1 Score: 482.3 bits (1240), Expect = 2.6e-132 Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0
BLAST of CmaCh04G021450 vs. NCBI nr
Match: KAG7032590.1 (Zinc finger protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 482.3 bits (1240), Expect = 2.6e-132 Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0
BLAST of CmaCh04G021450 vs. NCBI nr
Match: XP_023521257.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481.5 bits (1238), Expect = 4.5e-132 Identity = 248/253 (98.02%), Postives = 249/253 (98.42%), Query Frame = 0
BLAST of CmaCh04G021450 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 ) HSP 1 Score: 120.6 bits (301), Expect = 1.9e-27 Identity = 97/263 (36.88%), Postives = 132/263 (50.19%), Query Frame = 0
BLAST of CmaCh04G021450 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 ) HSP 1 Score: 108.2 bits (269), Expect = 9.6e-24 Identity = 82/217 (37.79%), Postives = 107/217 (49.31%), Query Frame = 0
BLAST of CmaCh04G021450 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 ) HSP 1 Score: 87.8 bits (216), Expect = 1.3e-17 Identity = 56/124 (45.16%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of CmaCh04G021450 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 ) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CmaCh04G021450 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-16 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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