CmaCh04G021310 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G021310
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	B3 domain-containing protein At2g32645-like
Location	Cma_Chr04: 14904029 .. 14904763 (+)
RNA-Seq Expression	CmaCh04G021310
Synteny	CmaCh04G021310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGAGAAGACTTAAAAACGAGATTTCTTTTCTTGGTTTGGACCTAGGAGTTCACATTCCTCGAAGAAAGAGGGGTTCTTCCGGCTCTGCTATTACCAAACATTCAATCTCTATGATGGAGTGCGCTACCATTCTGATTGCATTCTCCAACTCTGTCACTCATGTCCTTCCCTCTGCCTATCTTCCACTTCGAACCACTAACACAAAACCCATCACTGAAAGAAAACCCAGGAAGAAGAGGTGTAAGCAAACCCCCTTTCCGACCACTCCGGACATGCCGGCGGCGATGAGAGATCGAATTGGGGAGATGGGGGCGTACCAAATCCAACTGGCAATTCAAAAACAACTGCAAGATACTGATATGAACAAGAATCACGGGCGACTATCTTTCCCTGCAAAGAAACTCAAAGTGGATTTTGCAACGGAAGAGGAGAGGAGGGTACTAAAGCAACAGGAAAACGGGGGGAAAAAAGGGATGAATGTAATGATAGTGGATCCTCTTCTCCGAGAGAGCAGCATTTGCTTGAAGTTGTGGAAGATCGGGAGCGGGGATTCCTACTGTTTAATGACACAATGGAATTCATTGGTGGAACAGAATGGGTTCAAAAGCGGAGATCACGTCCAGCTTTGGAGCTTCAGAAAGGATGAATTTGAGGCTGAAACTCAAACCATGGTTTCTCGTCTCTGCTTCGCCATGGTTAAGCTTGATGCCACCACTGCTTCTGCTTGA

mRNA sequence

ATGGGTTTGAGAAGACTTAAAAACGAGATTTCTTTTCTTGGTTTGGACCTAGGAGTTCACATTCCTCGAAGAAAGAGGGGTTCTTCCGGCTCTGCTATTACCAAACATTCAATCTCTATGATGGAGTGCGCTACCATTCTGATTGCATTCTCCAACTCTGTCACTCATGTCCTTCCCTCTGCCTATCTTCCACTTCGAACCACTAACACAAAACCCATCACTGAAAGAAAACCCAGGAAGAAGAGGTGTAAGCAAACCCCCTTTCCGACCACTCCGGACATGCCGGCGGCGATGAGAGATCGAATTGGGGAGATGGGGGCGTACCAAATCCAACTGGCAATTCAAAAACAACTGCAAGATACTGATATGAACAAGAATCACGGGCGACTATCTTTCCCTGCAAAGAAACTCAAAGTGGATTTTGCAACGGAAGAGGAGAGGAGGGTACTAAAGCAACAGGAAAACGGGGGGAAAAAAGGGATGAATGTAATGATAGTGGATCCTCTTCTCCGAGAGAGCAGCATTTGCTTGAAGTTGTGGAAGATCGGGAGCGGGGATTCCTACTGTTTAATGACACAATGGAATTCATTGGTGGAACAGAATGGGTTCAAAAGCGGAGATCACGTCCAGCTTTGGAGCTTCAGAAAGGATGAATTTGAGGCTGAAACTCAAACCATGGTTTCTCGTCTCTGCTTCGCCATGGTTAAGCTTGATGCCACCACTGCTTCTGCTTGA

Coding sequence (CDS)

ATGGGTTTGAGAAGACTTAAAAACGAGATTTCTTTTCTTGGTTTGGACCTAGGAGTTCACATTCCTCGAAGAAAGAGGGGTTCTTCCGGCTCTGCTATTACCAAACATTCAATCTCTATGATGGAGTGCGCTACCATTCTGATTGCATTCTCCAACTCTGTCACTCATGTCCTTCCCTCTGCCTATCTTCCACTTCGAACCACTAACACAAAACCCATCACTGAAAGAAAACCCAGGAAGAAGAGGTGTAAGCAAACCCCCTTTCCGACCACTCCGGACATGCCGGCGGCGATGAGAGATCGAATTGGGGAGATGGGGGCGTACCAAATCCAACTGGCAATTCAAAAACAACTGCAAGATACTGATATGAACAAGAATCACGGGCGACTATCTTTCCCTGCAAAGAAACTCAAAGTGGATTTTGCAACGGAAGAGGAGAGGAGGGTACTAAAGCAACAGGAAAACGGGGGGAAAAAAGGGATGAATGTAATGATAGTGGATCCTCTTCTCCGAGAGAGCAGCATTTGCTTGAAGTTGTGGAAGATCGGGAGCGGGGATTCCTACTGTTTAATGACACAATGGAATTCATTGGTGGAACAGAATGGGTTCAAAAGCGGAGATCACGTCCAGCTTTGGAGCTTCAGAAAGGATGAATTTGAGGCTGAAACTCAAACCATGGTTTCTCGTCTCTGCTTCGCCATGGTTAAGCTTGATGCCACCACTGCTTCTGCTTGA

Protein sequence

MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPSAYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDATTASA

Homology

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BLAST of CmaCh04G021310 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.5e-14
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 81  KRCKQTPFP-TTPDMPAAMRDRIGEM-GAYQIQLAIQKQLQDTDMNKNHGRLSFPAKK-L 140
           K+ K  PFP T  D P  +   + +M  A   +L  +K L  TD+N    RLS P    L
Sbjct: 195 KKAKVAPFPGTARDTPKWLVKVMRDMKEAKDAKLIFEKTLFVTDINPTQNRLSMPFNNLL 254

Query: 141 KVDFATEEERRVLKQQENGGKK-GMNVMIVDPLLRESSICLKLWKI----GSGD-SYCLM 200
           + DF T  E R++K+  N  KK G+  ++VD    +  + LK W++    G G  +Y L+
Sbjct: 255 QNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWELKKESGKGSWNYNLI 314

Query: 201 TQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDATTA 243
             WN +VE NG K GD++ +WSFR              LCFAM +  ++ A
Sbjct: 315 CGWNDVVEANGLKEGDNISVWSFR----------CRGVLCFAMEQSSSSLA 355

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BLAST of CmaCh04G021310 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.4e-13
Identity = 56/174 (32.18%), Postives = 84/174 (48.28%), Query Frame = 0


Query: 73  ITERKPRKKRCKQTPF--PTTPDMPAAMRDRIGEM-GAYQIQLAIQKQLQDTDMNKNHGR 132
           I    PR+K+     F  P  P  P  +   +  M GA   +L I+K L   D++    R
Sbjct: 140 ILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNR 199

Query: 133 LSFPAKK-LKVDFATEEERRVLKQQE--NGGKKGMNVMIVDPLLRESSICLKLW--KIGS 192
           LS P    ++ DF T +E R++ + E  N G  G+   +VD   ++ ++  K W     S
Sbjct: 200 LSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDS 259

Query: 193 GDSY---CLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMV 236
           G SY    L  +W+++VE NG K GD + LWSFR ++           LCFA+V
Sbjct: 260 GSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSNDI----------LCFALV 303

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BLAST of CmaCh04G021310 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-12
Identity = 61/184 (33.15%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 73  ITERKPRK-------------KRCKQTPF-PTTPDMPAAMRDRIGEM-GAYQIQLAIQKQ 132
           +TE K RK             K+ K  PF  T  + P  + + + +M  A   +L  +K 
Sbjct: 161 LTENKNRKRRAVEQRKRTGGVKKAKVAPFSQTARETPEWLVNVMRDMKEAKDAKLIFEKT 220

Query: 133 LQDTDMNKNHGRLSFPAKK-LKVDFATEEERRVL-KQQENGGKKGMNVMIVDPLLRESSI 192
           L  TD+N    RLS P    L+ DF T  E R++ K  +N  K G+  ++VD   ++  +
Sbjct: 221 LFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRIIDKDIKNDKKIGVGAILVDQRCKKWGV 280

Query: 193 CLKLWKI----GSGD-SYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRL 235
            LK W++    G G  +Y L+  WN +VE NG K GD++ LWSFR              L
Sbjct: 281 MLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFRS----------CGIL 334

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BLAST of CmaCh04G021310 vs. ExPASy Swiss-Prot
Match: Q9SIC7 (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana OX=3702 GN=At2g31420 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 108 YQIQLAIQKQ-LQDTDMNKNHGRLSFPAKKL-KVDFATEEERRVLKQQENGGKK-GMNVM 167
           Y  +L I+++ L  TD+ KN G LS    KL K DF TE+E R L +     K+ G+ V 
Sbjct: 74  YDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKVF 133

Query: 168 IVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQ 227
           +VDP   +  + LK W   +   Y L   WN+++++  FK  D +++WSFR         
Sbjct: 134 LVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDGS------ 193

Query: 228 TMVSRLCFAM 235
               +LCFA+
Sbjct: 194 ---GKLCFAL 194

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BLAST of CmaCh04G021310 vs. ExPASy Swiss-Prot
Match: Q9SJ98 (B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana OX=3702 GN=At2g24670 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08
Identity = 43/155 (27.74%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 72  PITERKPRKKR------CKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNK 131
           P+ +RK +K +        +T  PT   + + MR + G       +  I K+L  TD++ 
Sbjct: 85  PMEQRKSKKAKRSTDASSSKTREPTPGWLISLMRSKNGGDVEDNSKKIIDKELFQTDVDP 144

Query: 132 NHGRLSFPAKKL-KVDFATEEERRVLKQQENG-GKKGMNVMIVDPLLRESSICLKLWKIG 191
           +  RLS P  ++ +++F   EE+R +++  N   K+G++ ++VD  LRE  + L+L  + 
Sbjct: 145 HQSRLSIPVSQIVELEFLNHEEKRAIEEDANRVRKEGVDAILVDSHLREFPVNLRLRDMR 204

Query: 192 SGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDE 219
               Y L+  WN +V     +   +++LWSF  D+
Sbjct: 205 GILLYNLVAGWNQVVTDCLLEENTNIRLWSFHADD 239

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BLAST of CmaCh04G021310 vs. ExPASy TrEMBL
Match: A0A6J1JKC5 (B3 domain-containing protein At2g32645-like OS=Cucurbita maxima OX=3661 GN=LOC111487692 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60
           MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS
Sbjct: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60

Query: 61  AYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQD 120
           AYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQD
Sbjct: 61  AYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQD 120

Query: 121 TDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLW 180
           TDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLW
Sbjct: 121 TDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLW 180

Query: 181 KIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDAT 240
           KIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDAT
Sbjct: 181 KIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDAT 240

Query: 241 TASA 245
           TASA
Sbjct: 241 TASA 244

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BLAST of CmaCh04G021310 vs. ExPASy TrEMBL
Match: A0A6J1H5Z0 (putative B3 domain-containing protein At3g24850 OS=Cucurbita moschata OX=3662 GN=LOC111460418 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125
Identity = 238/262 (90.84%), Postives = 239/262 (91.22%), Query Frame = 0


Query: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60
           MGLRRLKN+ISFL LDLGVHIPRRKRGSSGSAITK SISMMECATILIAFSNSVTHVLPS
Sbjct: 1   MGLRRLKNDISFLDLDLGVHIPRRKRGSSGSAITKRSISMMECATILIAFSNSVTHVLPS 60

Query: 61  AYLPLRTTN------------------TKPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120
           AYLPLRTTN                   KPITERKPRKKRCKQTPFPTTPDMPAAMRDRI
Sbjct: 61  AYLPLRTTNGKPITNTKPITKRKPITERKPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120

Query: 121 GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMN 180
           GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQEN GKKGMN
Sbjct: 121 GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKGMN 180

Query: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAE 240
           VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDE EAE
Sbjct: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDELEAE 240

Query: 241 TQTMVSRLCFAMVKLDATTASA 245
           TQTMVSRLCFAMVKLDATTASA
Sbjct: 241 TQTMVSRLCFAMVKLDATTASA 262

[Close]

BLAST of CmaCh04G021310 vs. ExPASy TrEMBL
Match: A0A6J1GM07 (putative B3 domain-containing protein At3g24850 OS=Cucurbita moschata OX=3662 GN=LOC111455464 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.7e-78
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 94  MPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQ 153
           MPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQ
Sbjct: 1   MPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQ 60

Query: 154 ENGGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWS 213
           ENGGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWN LVEQNGFKSGDHVQLWS
Sbjct: 61  ENGGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNWLVEQNGFKSGDHVQLWS 120

Query: 214 FRKDEFEAETQTMVSRLCFAMVKLDATTASA 245
           FRKDEFEAETQTMVSRLCFAMVKLDATTASA
Sbjct: 121 FRKDEFEAETQTMVSRLCFAMVKLDATTASA 151

[Close]

BLAST of CmaCh04G021310 vs. ExPASy TrEMBL
Match: A0A6J1CX35 (putative B3 domain-containing protein At2g27410 OS=Momordica charantia OX=3673 GN=LOC111015593 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56
Identity = 138/263 (52.47%), Postives = 167/263 (63.50%), Query Frame = 0


Query: 3   LRRLKNEISFLGLDLGVHIPRRKR--GSSGSAITKHS------------ISMMECATILI 62
           L  LK  I F  L  G+ IP+R+R   SS SA T  +            +SM+E A +L+
Sbjct: 9   LEALKMGICFSDLTNGISIPQRRRTGSSSSSAETSETNKPKPSSSATAPMSMVEAAAVLL 68

Query: 63  AFSNSVTHVLPSAYLPLRTTNTK----PIT----ERKPRKKRCKQTPFPTTPDMPAAMRD 122
           A + S T V       L   + K    P++    E K RKK+ K    P TP+MPAAMRD
Sbjct: 69  AMAYSATDVEAFCKSELEKNSRKRKRDPVSKSEPEMKQRKKKRKAMELPVTPEMPAAMRD 128

Query: 123 RIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKV-DFATEEERRVLKQ-QENGGK 182
           RI E+G Y IQL IQKQLQ+TDMNKNHGRLS PAKKL++ DF TEEER++L Q   N  K
Sbjct: 129 RIVEIGGYGIQLVIQKQLQNTDMNKNHGRLSLPAKKLRIHDFVTEEERKLLNQHSNNNNK 188

Query: 183 KGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDE 239
           KGM+V I+DP L+E  ICLK WKIGSGD YCLMTQWNS VE+   +SGD +QLWSFRKDE
Sbjct: 189 KGMDVPIIDPDLKERRICLKKWKIGSGDLYCLMTQWNSFVEETALRSGDFIQLWSFRKDE 248

[Close]

BLAST of CmaCh04G021310 vs. ExPASy TrEMBL
Match: A0A5A7TWX2 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold663G00300 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 119/232 (51.29%), Postives = 149/232 (64.22%), Query Frame = 0


Query: 19  VHIPRRKRGSSGSAITKHS--------ISMMECATILIAFSNSVTHVLPSAYLPLRTTNT 78
           ++IPR++RGSS  A  K          +SM E A+ILI  +NSV  V             
Sbjct: 23  IYIPRKRRGSSSGAGKKEQSITETELPLSMAEAASILIQLANSVPDVQRQKLNKTHKRKN 82

Query: 79  KPI----TERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKN 138
            PI    +  K +K+R K       P MP  MRDRI EMG Y+I+L IQKQL DTD+NKN
Sbjct: 83  PPIPTEASTSKTKKQRKKNVDQSEIPSMPVTMRDRILEMGGYEIRLVIQKQLTDTDLNKN 142

Query: 139 HGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLWKIGSGD 198
           HGRLS   K+L  DFATEEE  +L +QEN  KKG+NVMI+D +L E  +CLK WKIGSG+
Sbjct: 143 HGRLSMNKKQLSFDFATEEESELLSEQENKNKKGINVMILDDVLEERMLCLKKWKIGSGE 202

Query: 199 SYCLMTQWNSLVEQNGFKSGDHVQLWSFRK-DEFEAETQTMVSRLCFAMVKL 238
            YCLMT+WN +VE+ GF+SG+ +Q+WSFRK DE+EA       RLCFA+VKL
Sbjct: 203 VYCLMTKWNLMVEKRGFESGEEIQVWSFRKDDEYEAH------RLCFALVKL 248

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BLAST of CmaCh04G021310 vs. NCBI nr
Match: XP_022990807.1 (B3 domain-containing protein At2g32645-like [Cucurbita maxima] >XP_022990957.1 B3 domain-containing protein At2g32645-like [Cucurbita maxima])

HSP 1 Score: 485.0 bits (1247), Expect = 3.9e-133
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60
           MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS
Sbjct: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60

Query: 61  AYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQD 120
           AYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQD
Sbjct: 61  AYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQD 120

Query: 121 TDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLW 180
           TDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLW
Sbjct: 121 TDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMNVMIVDPLLRESSICLKLW 180

Query: 181 KIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDAT 240
           KIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDAT
Sbjct: 181 KIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDAT 240

Query: 241 TASA 245
           TASA
Sbjct: 241 TASA 244

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BLAST of CmaCh04G021310 vs. NCBI nr
Match: KAG6601882.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 463.0 bits (1190), Expect = 1.6e-126
Identity = 240/262 (91.60%), Postives = 240/262 (91.60%), Query Frame = 0


Query: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60
           MGLRRLKNEISFL LDLGVHIPRRKRGSSGSAITK SISMMECATILIAFSNSVTHVLPS
Sbjct: 1   MGLRRLKNEISFLDLDLGVHIPRRKRGSSGSAITKRSISMMECATILIAFSNSVTHVLPS 60

Query: 61  AYLPLRTTNT------------------KPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120
           AYLPLRTTNT                  KPITERKPRKKRCKQTPFPTTPDMPAAMRDRI
Sbjct: 61  AYLPLRTTNTKPITERKPISERKPITKRKPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120

Query: 121 GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMN 180
           GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMN
Sbjct: 121 GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMN 180

Query: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAE 240
           VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWN LVEQNGFKSGDHVQLWSFRKDE EAE
Sbjct: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNWLVEQNGFKSGDHVQLWSFRKDELEAE 240

Query: 241 TQTMVSRLCFAMVKLDATTASA 245
           TQTMVSRLCFAMVKLDATTASA
Sbjct: 241 TQTMVSRLCFAMVKLDATTASA 262

[Close]

BLAST of CmaCh04G021310 vs. NCBI nr
Match: XP_023540870.1 (putative B3 domain-containing protein At3g24850 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 239/262 (91.22%), Postives = 241/262 (91.98%), Query Frame = 0


Query: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60
           MGLRRLKNEISFL LDLGVHIPRRKRGSSGSAITK SISMMECATILIAFSNSVTHVLPS
Sbjct: 1   MGLRRLKNEISFLDLDLGVHIPRRKRGSSGSAITKRSISMMECATILIAFSNSVTHVLPS 60

Query: 61  AYLPLRTTNT------------------KPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120
           AYLP+RTTNT                  KPITERKPRKKRCKQTPFPTTPDMPAAMRDRI
Sbjct: 61  AYLPVRTTNTKPITDRKPISERKPITKRKPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120

Query: 121 GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMN 180
           GEMGAYQI+LAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQEN GKKGMN
Sbjct: 121 GEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKGMN 180

Query: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAE 240
           VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAE
Sbjct: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAE 240

Query: 241 TQTMVSRLCFAMVKLDATTASA 245
           TQTMVSRLCFAMVKLDATTASA
Sbjct: 241 TQTMVSRLCFAMVKLDATTASA 262

[Close]

BLAST of CmaCh04G021310 vs. NCBI nr
Match: XP_022959448.1 (putative B3 domain-containing protein At3g24850 [Cucurbita moschata])

HSP 1 Score: 459.1 bits (1180), Expect = 2.3e-125
Identity = 238/262 (90.84%), Postives = 239/262 (91.22%), Query Frame = 0


Query: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60
           MGLRRLKN+ISFL LDLGVHIPRRKRGSSGSAITK SISMMECATILIAFSNSVTHVLPS
Sbjct: 1   MGLRRLKNDISFLDLDLGVHIPRRKRGSSGSAITKRSISMMECATILIAFSNSVTHVLPS 60

Query: 61  AYLPLRTTN------------------TKPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120
           AYLPLRTTN                   KPITERKPRKKRCKQTPFPTTPDMPAAMRDRI
Sbjct: 61  AYLPLRTTNGKPITNTKPITKRKPITERKPITERKPRKKRCKQTPFPTTPDMPAAMRDRI 120

Query: 121 GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENGGKKGMN 180
           GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQEN GKKGMN
Sbjct: 121 GEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKGMN 180

Query: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAE 240
           VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDE EAE
Sbjct: 181 VMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDELEAE 240

Query: 241 TQTMVSRLCFAMVKLDATTASA 245
           TQTMVSRLCFAMVKLDATTASA
Sbjct: 241 TQTMVSRLCFAMVKLDATTASA 262

[Close]

BLAST of CmaCh04G021310 vs. NCBI nr
Match: KAG6601884.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 451.8 bits (1161), Expect = 3.7e-123
Identity = 236/274 (86.13%), Postives = 239/274 (87.23%), Query Frame = 0


Query: 1   MGLRRLKNEISFLGLDLGVHIPRRKRGSSGSAITKHSISMMECATILIAFSNSVTHVLPS 60
           MGLRRLKNEISFL LDLGVHIPRRKRGSSGSAITKHSISMM+ ATIL AFSNSVTH+L S
Sbjct: 1   MGLRRLKNEISFLDLDLGVHIPRRKRGSSGSAITKHSISMMDGATILFAFSNSVTHILSS 60

Query: 61  AYLPLRTTNT------------------------------KPITERKPRKKRCKQTPFPT 120
           +YLPLRTTNT                              KPITERKPRKKRCKQTPFPT
Sbjct: 61  SYLPLRTTNTKPITNTKPITERKPITERKPISERKPISERKPITERKPRKKRCKQTPFPT 120

Query: 121 TPDMPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVL 180
           TPDMPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVL
Sbjct: 121 TPDMPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVL 180

Query: 181 KQQENGGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQ 240
           KQQENGGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWN LVEQNGFKSGDHVQ
Sbjct: 181 KQQENGGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNWLVEQNGFKSGDHVQ 240

Query: 241 LWSFRKDEFEAETQTMVSRLCFAMVKLDATTASA 245
           LWSFRKDEFEAETQTMVSRLCFAMVKLDATTASA
Sbjct: 241 LWSFRKDEFEAETQTMVSRLCFAMVKLDATTASA 274

[Close]

BLAST of CmaCh04G021310 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 79.3 bits (194), Expect = 4.6e-15
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 81  KRCKQTPFP-TTPDMPAAMRDRIGEM-GAYQIQLAIQKQLQDTDMNKNHGRLSFPAKK-L 140
           K+ K  PFP T  D P  +   + +M  A   +L  +K L  TD+N    RLS P    L
Sbjct: 195 KKAKVAPFPGTARDTPKWLVKVMRDMKEAKDAKLIFEKTLFVTDINPTQNRLSMPFNNLL 254

Query: 141 KVDFATEEERRVLKQQENGGKK-GMNVMIVDPLLRESSICLKLWKI----GSGD-SYCLM 200
           + DF T  E R++K+  N  KK G+  ++VD    +  + LK W++    G G  +Y L+
Sbjct: 255 QNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWELKKESGKGSWNYNLI 314

Query: 201 TQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDATTA 243
             WN +VE NG K GD++ +WSFR              LCFAM +  ++ A
Sbjct: 315 CGWNDVVEANGLKEGDNISVWSFR----------CRGVLCFAMEQSSSSLA 355

[Close]

BLAST of CmaCh04G021310 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 75.5 bits (184), Expect = 6.7e-14
Identity = 56/174 (32.18%), Postives = 84/174 (48.28%), Query Frame = 0


Query: 73  ITERKPRKKRCKQTPF--PTTPDMPAAMRDRIGEM-GAYQIQLAIQKQLQDTDMNKNHGR 132
           I    PR+K+     F  P  P  P  +   +  M GA   +L I+K L   D++    R
Sbjct: 140 ILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNR 199

Query: 133 LSFPAKK-LKVDFATEEERRVLKQQE--NGGKKGMNVMIVDPLLRESSICLKLW--KIGS 192
           LS P    ++ DF T +E R++ + E  N G  G+   +VD   ++ ++  K W     S
Sbjct: 200 LSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDS 259

Query: 193 GDSY---CLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMV 236
           G SY    L  +W+++VE NG K GD + LWSFR ++           LCFA+V
Sbjct: 260 GSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSNDI----------LCFALV 303

[Close]

BLAST of CmaCh04G021310 vs. TAIR 10
Match: AT2G31420.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 68.6 bits (166), Expect = 8.2e-12
Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 108 YQIQLAIQKQ-LQDTDMNKNHGRLSFPAKKL-KVDFATEEERRVLKQQENGGKK-GMNVM 167
           Y  +L I+++ L  TD+ KN G LS    KL K DF TE+E R L +     K+ G+ V 
Sbjct: 74  YDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKVF 133

Query: 168 IVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQ 227
           +VDP   +  + LK W   +   Y L   WN+++++  FK  D +++WSFR         
Sbjct: 134 LVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDGS------ 193

Query: 228 TMVSRLCFAM 235
               +LCFA+
Sbjct: 194 ---GKLCFAL 194

[Close]

BLAST of CmaCh04G021310 vs. TAIR 10
Match: AT2G24670.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 43/155 (27.74%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 72  PITERKPRKKR------CKQTPFPTTPDMPAAMRDRIGEMGAYQIQLAIQKQLQDTDMNK 131
           P+ +RK +K +        +T  PT   + + MR + G       +  I K+L  TD++ 
Sbjct: 85  PMEQRKSKKAKRSTDASSSKTREPTPGWLISLMRSKNGGDVEDNSKKIIDKELFQTDVDP 144

Query: 132 NHGRLSFPAKKL-KVDFATEEERRVLKQQENG-GKKGMNVMIVDPLLRESSICLKLWKIG 191
           +  RLS P  ++ +++F   EE+R +++  N   K+G++ ++VD  LRE  + L+L  + 
Sbjct: 145 HQSRLSIPVSQIVELEFLNHEEKRAIEEDANRVRKEGVDAILVDSHLREFPVNLRLRDMR 204

Query: 192 SGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDE 219
               Y L+  WN +V     +   +++LWSF  D+
Sbjct: 205 GILLYNLVAGWNQVVTDCLLEENTNIRLWSFHADD 239

[Close]

BLAST of CmaCh04G021310 vs. TAIR 10
Match: AT2G31720.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 47/175 (26.86%), Postives = 81/175 (46.29%), Query Frame = 0


Query: 48  IAFSNSVTHVLPSAYLPLRTTNTKPITERKPRKKRCKQTPFPTTPDMPAAMRDRIGEMGA 107
           +A S S  H+   +  P +  + KP+  RKP       T    TP     + D + E+  
Sbjct: 91  VASSPSSCHL--ESKRPQKVVSNKPVRNRKP----VIVTDEDRTP--TEWLIDVMREVNG 150

Query: 108 YQIQLAIQKQLQDTDMNKNHGRLSFPAKK-LKVDFATEEERRVLKQQE---NGGKKGMNV 167
              +L   K L ++D+++   RL  P K+ L +DF  EEE   + +     +   KG +V
Sbjct: 151 MDAKLIFVKVLPNSDVDELQTRLMMPWKQILDMDFLNEEELEKIDRHHKKISASDKGADV 210

Query: 168 MIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDE 219
           ++V+    +  + LK W + S  +Y L   WN +V  N  + G  +++WSF   +
Sbjct: 211 IVVNSKGLQRKLKLKRWDMTSTSNYVLGLGWNKVVTDNILQRGTRLRIWSFHSPD 257

The following BLAST results are available for this feature:

BLAST of CmaCh04G021310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRX6	6.5e-14	34.50	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5RM09	9.4e-13	32.18	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9LSF7	1.6e-12	33.15	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9SIC7	1.1e-10	34.62	B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana OX=3702 GN=At2g31...	[more]
Q9SJ98	1.4e-08	27.74	B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana OX=3702 GN=At2g24...	[more]

BLAST of CmaCh04G021310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKC5	1.9e-133	100.00	B3 domain-containing protein At2g32645-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H5Z0	1.1e-125	90.84	putative B3 domain-containing protein At3g24850 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GM07	1.7e-78	99.34	putative B3 domain-containing protein At3g24850 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CX35	1.9e-56	52.47	putative B3 domain-containing protein At2g27410 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7TWX2	1.4e-51	51.29	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of CmaCh04G021310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990807.1	3.9e-133	100.00	B3 domain-containing protein At2g32645-like [Cucurbita maxima] >XP_022990957.1 B...	[more]
KAG6601882.1	1.6e-126	91.60	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023540870.1	2.1e-126	91.22	putative B3 domain-containing protein At3g24850 [Cucurbita pepo subsp. pepo]	[more]
XP_022959448.1	2.3e-125	90.84	putative B3 domain-containing protein At3g24850 [Cucurbita moschata]	[more]
KAG6601884.1	3.7e-123	86.13	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of CmaCh04G021310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24850.1	4.6e-15	34.50	Domain of unknown function (DUF313)	[more]
AT1G05920.1	6.7e-14	32.18	Domain of unknown function (DUF313)	[more]
AT2G31420.1	8.2e-12	34.62	Domain of unknown function (DUF313)	[more]
AT2G24670.1	1.0e-09	27.74	Domain of unknown function (DUF313)	[more]
AT2G31720.1	4.2e-08	26.86	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 94..199 e-value: 2.8E-19 score: 69.4
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 74..238
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 106..228 e-value: 2.7E-15 score: 57.9
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 114..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..95
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 74..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G021310.1	CmaCh04G021310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding