CmaCh04G021300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G021300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	10 kDa chaperonin-like
Location	Cma_Chr04: 14902073 .. 14903311 (-)
RNA-Seq Expression	CmaCh04G021300
Synteny	CmaCh04G021300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACTCTCCAAAAGGTCTAAACCCAAGAACATCAAAAGCACTTAAACCCTAACGCGTAGAACCTTCTAGGCGCATCGAGAACCCGAAATTTGCACGCCCTTTCTTCCAATAGCCACATAAAGGCACCTCTTCTCGTCGCCTTCCTACTCCAAAACCCTAATTCTCCGAGCACAGACGTTGCACGAACAATCAACTCAAAGACGAATGGCGAAGCGATTAATTCCATTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACTGCCGGCATTCTTCTCCCTGAGAGCTCCACCAAGGTATTTGCAATGTAGCATTCATTTTATCTGTAGTTTCATTTCAATTTTCCTTGTCCTTACTTGATTTGGTTTATATGTGATTAACCGATGTTTGGTACGACAGCTGAACTCCGGTAAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAGCGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTTGGAGAGAAAGAGTATGCTTTTAAACAGTTTTAACTTAGTTTTATTTCTTTGTTAGCAGAAATGGTCGTCTGCGATGTAATTCGTCCTGCACTTTTTATTAGGCTTGTTTTGTTTGCATTTTTAGTTCACTAACGTAAAGTCATGAATAGTGCTTTTATGTCTCTGAGGCACCATCTCCGATTCTAAATGAATTTGAATTATAGTTAAACTAATTAATAAAAAAAAAGTTTAAGAGCTAAATTTGGTTTCTACGGAGTTATGGGATAGAACTTAACTTGTTGTGTTAAAACTAAGTATTTCAAAGTCCAAGAGAGAAAACATAAAGCTGAATCAACTCAAATGTACAGGAAGATTTAGGGCTAAGAGTGAATTTAAAATGATTTGTCGAAAGATTTAAAGCTAGTGATATTAACCTCTTTATGTTTGATTAGATAATCAAGAAGTGTTGTAGAAAACTTTCAGAGCATAAAAACACTTAAAAAGTACTTTCGAGAGAATAACTAAATTGCTGTTTCAGTGTTTCTTCCCGAAACTGAATGTTCCTCGAAATTATGTCAAACCAAGACTAAAAAAAAGGGATTAAAATAGCATTTTTTGAATTCATTTTCATGATTTTAGTTTGAATTCTTTGATTGGGGTTTATCTGCAGGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTCTACATGATTGA

mRNA sequence

GCACTCTCCAAAAGGTCTAAACCCAAGAACATCAAAAGCACTTAAACCCTAACGCGTAGAACCTTCTAGGCGCATCGAGAACCCGAAATTTGCACGCCCTTTCTTCCAATAGCCACATAAAGGCACCTCTTCTCGTCGCCTTCCTACTCCAAAACCCTAATTCTCCGAGCACAGACGTTGCACGAACAATCAACTCAAAGACGAATGGCGAAGCGATTAATTCCATTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACTGCCGGCATTCTTCTCCCTGAGAGCTCCACCAAGCTGAACTCCGGTAAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAGCGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTCTACATGATTGA

Coding sequence (CDS)

ATGGCGAAGCGATTAATTCCATTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACTGCCGGCATTCTTCTCCCTGAGAGCTCCACCAAGCTGAACTCCGGTAAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAGCGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTCTACATGATTGA

Protein sequence

MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD

Homology

[Close]

BLAST of CmaCh04G021300 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 6.8e-39
Identity = 73/97 (75.26%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          M KRLIP FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD+ G LIPVSV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of CmaCh04G021300 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-38
Identity = 73/97 (75.26%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          M KRLIP FNR+L++ ++ P+KT +GILLPE ++KLNSGKV+AVGPG+RD+ G LIPVSV
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97

[Close]

BLAST of CmaCh04G021300 vs. ExPASy Swiss-Prot
Match: Q64433 (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 9.2e-20
Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 3   KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRSGNLIPVSVK 62
           ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G + +SG + PVSVK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63  EGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
            GD VLLPEYGGT V L +K++ LFRD DILG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKYVD 102

[Close]

BLAST of CmaCh04G021300 vs. ExPASy Swiss-Prot
Match: P61603 (10 kDa heat shock protein, mitochondrial OS=Bos taurus OX=9913 GN=HSPE1 PE=3 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-19
Identity = 49/96 (51.04%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 3   KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRSGNLIPVSVK 62
           ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G++ + G + PVSVK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66

Query: 63  EGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
            GD VLLPEYGGT V L +K++ LFRD DILG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102

[Close]

BLAST of CmaCh04G021300 vs. ExPASy Swiss-Prot
Match: P61604 (10 kDa heat shock protein, mitochondrial OS=Homo sapiens OX=9606 GN=HSPE1 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-19
Identity = 49/96 (51.04%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 3   KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRSGNLIPVSVK 62
           ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G++ + G + PVSVK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66

Query: 63  EGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
            GD VLLPEYGGT V L +K++ LFRD DILG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102

[Close]

BLAST of CmaCh04G021300 vs. ExPASy TrEMBL
Match: A0A6J1JRD8 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111487657 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.5e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. ExPASy TrEMBL
Match: A0A6J1E6B4 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111431183 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GNLIPVSV
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDED+LGTLHD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. ExPASy TrEMBL
Match: A0A6J1DEL3 (10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111020078 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.5e-44
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIP  NRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNL+PVSV
Sbjct: 1  MAKRLIPLLNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLVPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLP+YGGT VKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPDYGGTPVKLGEKEFHLFRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. ExPASy TrEMBL
Match: A0A498HMY9 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007539 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 86/97 (88.66%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MA+RLIP  NRVLIEKI+PPSKTTAGILLPESSTKLNSGKVVAVGPGA+D++GNLIPV+V
Sbjct: 1  MARRLIPTLNRVLIEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGAKDKAGNLIPVAV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLG+KEFHL+RDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGDKEFHLYRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. ExPASy TrEMBL
Match: A0A5N5GXG6 (10 kDa chaperonin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_036978 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 86/97 (88.66%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MA+RLIP  NRVLIEKI+PPSKTTAGILLPESSTKLNSGKVVAVGPGA+D++GNLIPV+V
Sbjct: 1  MARRLIPTLNRVLIEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGAKDKAGNLIPVAV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLG+KEFHL+RDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTEVKLGDKEFHLYRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. NCBI nr
Match: XP_022990905.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 193.7 bits (491), Expect = 7.2e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. NCBI nr
Match: XP_023550871.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GNLIPVSV
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. NCBI nr
Match: XP_022923512.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >KAG6601881.1 10 kDa chaperonin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032581.1 10 kDa chaperonin, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GNLIPVSV
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDED+LGTLHD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. NCBI nr
Match: XP_022152333.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia])

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIP  NRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNL+PVSV
Sbjct: 1  MAKRLIPLLNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLVPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLP+YGGT VKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPDYGGTPVKLGEKEFHLFRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. NCBI nr
Match: KAF3432182.1 (hypothetical protein FNV43_RR26921 [Rhamnella rubrinervis])

HSP 1 Score: 181.4 bits (459), Expect = 3.7e-42
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MA+RLIP  NRVL+EKI+PPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGN++PV V
Sbjct: 1  MARRLIPTLNRVLVEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNVVPVCV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEFHLFRDEDILGTLHD 97

[Close]

BLAST of CmaCh04G021300 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein )

HSP 1 Score: 161.4 bits (407), Expect = 3.7e-40
Identity = 77/97 (79.38%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          MAKRLIP  NRVL+EKI+PPSKT +GILLPE S++LNSG+V+AVGPGARDR+GNLIPVSV
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGD VLLPE+GGT VKLGEKEF L+RDEDI+ TLH+
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

[Close]

BLAST of CmaCh04G021300 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 )

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-40
Identity = 73/97 (75.26%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60
          M KRLIP FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD+ G LIPVSV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

The following BLAST results are available for this feature:

BLAST of CmaCh04G021300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34893	6.8e-39	75.26	10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 S...	[more]
Q96539	1.2e-38	75.26	10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1	[more]
Q64433	9.2e-20	52.08	10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 ...	[more]
P61603	3.5e-19	51.04	10 kDa heat shock protein, mitochondrial OS=Bos taurus OX=9913 GN=HSPE1 PE=3 SV=...	[more]
P61604	3.5e-19	51.04	10 kDa heat shock protein, mitochondrial OS=Homo sapiens OX=9606 GN=HSPE1 PE=1 S...	[more]

BLAST of CmaCh04G021300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRD8	3.5e-46	100.00	10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC11148765...	[more]
A0A6J1E6B4	1.3e-45	97.94	10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111431...	[more]
A0A6J1DEL3	9.5e-44	94.85	10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A498HMY9	1.5e-41	88.66	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007539 PE=3 SV=1	[more]
A0A5N5GXG6	1.5e-41	88.66	10 kDa chaperonin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674...	[more]

BLAST of CmaCh04G021300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990905.1	7.2e-46	100.00	10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]	[more]
XP_023550871.1	1.6e-45	98.97	10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923512.1	2.7e-45	97.94	10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >KAG6601881.1 10 kDa ...	[more]
XP_022152333.1	2.0e-43	94.85	10 kDa chaperonin, mitochondrial-like [Momordica charantia]	[more]
KAF3432182.1	3.7e-42	90.72	hypothetical protein FNV43_RR26921 [Rhamnella rubrinervis]	[more]

BLAST of CmaCh04G021300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23100.1	3.7e-40	79.38	GroES-like family protein	[more]
AT1G14980.1	4.8e-40	75.26	chaperonin 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 5..20 score: 26.43 coord: 82..95 score: 31.55 coord: 61..73 score: 52.0 coord: 26..47 score: 40.29
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..95 e-value: 1.0E-32 score: 124.7
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 5..94 e-value: 3.1E-24 score: 84.8
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..97
IPR020818	GroES chaperonin family	CDD	cd00320	cpn10	coord: 4..95 e-value: 1.11753E-34 score: 112.215
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40	GroES chaperonin	coord: 1..97 e-value: 9.6E-32 score: 111.2
None	No IPR available	PANTHER	PTHR10772:SF37	GROES-LIKE FAMILY PROTEIN	coord: 1..97
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 3..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G021300.1	CmaCh04G021300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity