CmaCh04G021250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G021250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Senescence-associated protein
Location	Cma_Chr04: 14882624 .. 14884137 (+)
RNA-Seq Expression	CmaCh04G021250
Synteny	CmaCh04G021250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACCATTTCCAGCTTTATTGTCCTAGTGCTGGACCAGATGGTAATTCTAATTTTATATTTTATTCTCAATTCATTTGTGTTAATTCGTTGCAATTTTCCTTTACAATCATGTTGCATGTTTCTAATCTGAAAGGATGGAGAAAAAAATTAGATGTTATTCGGTATTTATCTCATTTTGTGGTGGGGTTCTCTGTTTTGAGATGTTTGGGTTCTCTCATGTTGTATGGGTTTTTTTGTGCAGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGGAGAAGATGGAAAAGCAGCGTCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGAATCCGCGTAATGATGACGGGTGATAGCCTTCAATTAGGTTGGTTTTAGTTTGTTGTGAGCCTTTGCAATTTGTTTTTTTCCTCCTTTTGTAATCTTTTTGGACCCGTATTTCAACTTGATTTAGAGTTGGGTGGGGTTCCCTTTCCTCTTCAAATAAATACTTAGATTTTACCCCTTGAAACAAATTGCATCATAGTTTTTGATTGGCCATATATTGTTAAAAAGGTTATGGATCGAACTCGAAGAGTGTGTTCAATGAAAATGGGAGTTTGGCGCACATTAAGGAATTGTATAATTGAAAAGGTGGTGGTGGATGGTTTGATGTTGACTGTGTGAAATCTGAAGCGCTATGTATCACGTTTTGTGGGTACTGATTATGTCATTGACAGAGCCTCACTTTCAATGGTGTGTGTGGGTCACCCACCAGCCCTTTTGACCTTTTTCTTTTCCCTTTTTCCTTCCTGTGTTGAAACCAGTGGTTTCTGTTCTCGTGGATTTTCGTTGTAGCAAGCAAGTTAAAATTGTTAAGATAGGAAGAGAGGTCATAAAAATTGACCTGATTTAAGGAGAAAAAAAGCTCTGCCATCAATACATTTTATCTGTTCATTTAACTCAACACATGGTTTTGGGAGGCCTAAATTTTATGCCCGATCTTTGCTACGGTTCGCCTTCGTTTGCACGCGTCGGGCAGCTACCTGCTACTCACGTTTGCGCCTCCTGATGAGTCCATTTCTGCAACTAGTATTTACATTCACCCTTAAATTTTAATTTTATGAATGAGATATTATATGGATTTGGTTTAATGAAAAAGGAAAAAGGTTGTGTTGGAGCTTAATTGAAAGTGGAGTTTGGGTAAAGGTGATGTGATTGTGAGGGTGAGAAATGGT

mRNA sequence

ATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACCATTTCCAGCTTTATTGTCCTAGTGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGGAGAAGATGGAAAAGCAGCGTCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGAATCCGCGTAATGATGACGGGTGATAGCCTTCAATTAGGTTGGTTTTAGTTTGTTGTGAGCCTTTGCAATTTGTTTTTTTCCTCCTTTTGTAATCTTTTTGGACCCGTATTTCAACTTGATTTAGAGTTGGGTGGGGTTCCCTTTCCTCTTCAAATAAATACTTAGATTTTACCCCTTGAAACAAATTGCATCATAGTTTTTGATTGGCCATATATTGTTAAAAAGGTTATGGATCGAACTCGAAGAGTGTGTTCAATGAAAATGGGAGTTTGGCGCACATTAAGGAATTGTATAATTGAAAAGGTGGTGGTGGATGGTTTGATGTTGACTGTGTGAAATCTGAAGCGCTATGTATCACGTTTTGTGGGTACTGATTATGTCATTGACAGAGCCTCACTTTCAATGGTGTGTGTGGGTCACCCACCAGCCCTTTTGACCTTTTTCTTTTCCCTTTTTCCTTCCTGTGTTGAAACCAGTGGTTTCTGTTCTCGTGGATTTTCGTTGTAGCAAGCAAGTTAAAATTGTTAAGATAGGAAGAGAGGTCATAAAAATTGACCTGATTTAAGGAGAAAAAAAGCTCTGCCATCAATACATTTTATCTGTTCATTTAACTCAACACATGGTTTTGGGAGGCCTAAATTTTATGCCCGATCTTTGCTACGGTTCGCCTTCGTTTGCACGCGTCGGGCAGCTACCTGCTACTCACGTTTGCGCCTCCTGATGAGTCCATTTCTGCAACTAGTATTTACATTCACCCTTAAATTTTAATTTTATGAATGAGATATTATATGGATTTGGTTTAATGAAAAAGGAAAAAGGTTGTGTTGGAGCTTAATTGAAAGTGGAGTTTGGGTAAAGGTGATGTGATTGTGAGGGTGAGAAATGGT

Coding sequence (CDS)

ATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACCATTTCCAGCTTTATTGTCCTAGTGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGGAGAAGATGGAAAAGCAGCGTCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGA

Protein sequence

MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

Homology

[Close]

BLAST of CmaCh04G021250 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-05
Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 13  NVKGN-----RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSD-- 72
           N +GN     +++IS+ V GS GP+R +V     V + I   +  Y +EGR P L  D  
Sbjct: 113 NQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDRDSA 172

Query: 73  --LH--HFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK 101
             LH  HF + C       L   + IG  G+R+F + KK
Sbjct: 173 FELHQSHFSIQC-------LEKREIIGELGSRSFYMRKK 204

[Close]

BLAST of CmaCh04G021250 vs. ExPASy TrEMBL
Match: A0A6J1JP66 (uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111487636 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60
           MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP
Sbjct: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60

Query: 61  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120
           ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR
Sbjct: 61  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120

Query: 121 KASGSWKSWINKSLNMKIYSH 142
           KASGSWKSWINKSLNMKIYSH
Sbjct: 121 KASGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of CmaCh04G021250 vs. ExPASy TrEMBL
Match: A0A6J1H7B9 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111460829 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.7e-73
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60
           MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP
Sbjct: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60

Query: 61  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120
           ILGSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEK GEDGKAASRPAIHR
Sbjct: 61  ILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHR 120

Query: 121 KASGSWKSWINKSLNMKIYSH 142
           KASGSWKSWINKSLNMKIYSH
Sbjct: 121 KASGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of CmaCh04G021250 vs. ExPASy TrEMBL
Match: A0A0A0KUW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.8e-63
Identity = 122/139 (87.77%), Postives = 128/139 (92.09%), Query Frame = 0


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 63  GSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122
           GSDL  FQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ EKV E+GK  S PAI RK+
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           +GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of CmaCh04G021250 vs. ExPASy TrEMBL
Match: A0A6J1FHE7 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111445404 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.0e-62
Identity = 121/139 (87.05%), Postives = 126/139 (90.65%), Query Frame = 0


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 63  GSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122
           GSDL  FQLYCP AGPDALSPWDTIGSHG+RNF LCKKPQ EKVGE G +   P+I RK 
Sbjct: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           +GSWKSWINKSLNMKIYSH
Sbjct: 121 TGSWKSWINKSLNMKIYSH 139

[Close]

BLAST of CmaCh04G021250 vs. ExPASy TrEMBL
Match: A0A1S4DSB9 (uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.9e-62
Identity = 120/139 (86.33%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 63  GSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122
           GSDL  FQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ EKV E+GK+   P I RK+
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVSEEGKSPPGPTIPRKS 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           +GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of CmaCh04G021250 vs. NCBI nr
Match: XP_022990881.1 (uncharacterized protein At4g22758 [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60
           MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP
Sbjct: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60

Query: 61  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120
           ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR
Sbjct: 61  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120

Query: 121 KASGSWKSWINKSLNMKIYSH 142
           KASGSWKSWINKSLNMKIYSH
Sbjct: 121 KASGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of CmaCh04G021250 vs. NCBI nr
Match: XP_023521148.1 (uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo] >XP_023521149.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.4 bits (729), Expect = 2.6e-73
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60
           MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP
Sbjct: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60

Query: 61  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120
           ILGSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR
Sbjct: 61  ILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120

Query: 121 KASGSWKSWINKSLNMKIYSH 142
           KASGSWKSWINKSLNMKIYSH
Sbjct: 121 KASGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of CmaCh04G021250 vs. NCBI nr
Match: XP_022959923.1 (uncharacterized protein At4g22758-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 7.7e-73
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60
           MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP
Sbjct: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60

Query: 61  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 120
           ILGSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEK GEDGKAASRPAIHR
Sbjct: 61  ILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHR 120

Query: 121 KASGSWKSWINKSLNMKIYSH 142
           KASGSWKSWINKSLNMKIYSH
Sbjct: 121 KASGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of CmaCh04G021250 vs. NCBI nr
Match: KAG7032577.1 (hypothetical protein SDJN02_06626, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.4 bits (716), Expect = 8.5e-72
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 48  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 107

Query: 63  GSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122
           GSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEK GEDGKAASRPAIHRKA
Sbjct: 108 GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 167

Query: 123 SGSWKSWINKSLNMKIYSH 142
           SGSWKSWINKSLNMKIYSH
Sbjct: 168 SGSWKSWINKSLNMKIYSH 186

[Close]

BLAST of CmaCh04G021250 vs. NCBI nr
Match: XP_023540757.1 (uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 140/164 (85.37%), Postives = 140/164 (85.37%), Query Frame = 0


Query: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60
           MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP
Sbjct: 1   MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 60

Query: 61  ILGSDLHHFQLYCPSAGPDA-----------------------LSPWDTIGSHGARNFTL 120
           ILGSDLH FQLYCPSAGPDA                       LSPWDTIGSHGARNFTL
Sbjct: 61  ILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKXGSLSPWDTIGSHGARNFTL 120

Query: 121 CKKPQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH 142
           CKKPQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Sbjct: 121 CKKPQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH 164

[Close]

BLAST of CmaCh04G021250 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 182.6 bits (462), Expect = 2.2e-46
Identity = 90/140 (64.29%), Postives = 105/140 (75.00%), Query Frame = 0


Query: 3   MLLY-KQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPI 62
           MLLY KQKKNQN KGNR+LIS+ VLGSAGPIRF+  E+ LVA VIDTALK YAREGRLP+
Sbjct: 1   MLLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPL 60

Query: 63  LGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRK 122
           LGSD + F LYCP  GP+ALS WD IGS GARNF LC+KP+ +KV E    +       +
Sbjct: 61  LGSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGAR 120

Query: 123 ASGSWKSWINKSLNMKIYSH 142
             GS K+WINKS N+K+ SH
Sbjct: 121 KGGSLKAWINKSFNLKVSSH 140

[Close]

BLAST of CmaCh04G021250 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 172.6 bits (436), Expect = 2.3e-43
Identity = 90/142 (63.38%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYK KKNQ VKGNR+LIS+  LGSAGPIRF+ +E  LVA VIDTALK YAREGRLPIL
Sbjct: 1   MLLYK-KKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPIL 60

Query: 63  GSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLC-KKPQAEKVGEDGKAASRP--AIH 122
           GSD + F  YCP  GP ALSPW+ IGS G RNF LC KKP+ +KV ED   ++ P     
Sbjct: 61  GSDFNDFVFYCPMVGPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGAR 120

Query: 123 RKASGSWKSWINKSLNMKIYSH 142
           + A GS+K+WINKSL +K+ +H
Sbjct: 121 KGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of CmaCh04G021250 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21
Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 10  KNQNVKG------NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILG 69
           +N+NVKG       +LL+S+NVLGS GPIRF+ +E+  V+  I+T LK+YAR+GR+P+LG
Sbjct: 3   RNENVKGVMKRKNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLG 62

Query: 70  SDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAI 119
            D+ +F  Y  +AG + L P + IGS    NF +CKK        +G   SR  I
Sbjct: 63  FDVDNFIFYSINAGFNTLHPQEKIGSMDVTNFLMCKKEPRPLEKVEGIRESRARI 117

[Close]

BLAST of CmaCh04G021250 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-09
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 18  RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL-GSDLHHFQLYCPSA 77
           +LL+++ V GS G ++ I+S E  V+D+ID A++ Y +E R P L  S+   F L+    
Sbjct: 71  KLLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQF 130

Query: 78  GPDALSPWDTIGSHGARNFTLCKKPQ 103
             +++   + + S G+RNF LC + +
Sbjct: 131 SLESIVRDEKLISLGSRNFFLCGRKE 156

[Close]

BLAST of CmaCh04G021250 vs. TAIR 10
Match: AT2G01554.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 2.7e-07
Identity = 46/141 (32.62%), Postives = 61/141 (43.26%), Query Frame = 0


Query: 4   LLYKQKKNQNVKG---NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 63
           +LY  K  +N K    NR L+SINVLGSAG   F  S++                   +P
Sbjct: 1   MLYNNKHQRNQKSKTTNRFLVSINVLGSAG---FHFSDQ-------------------IP 60

Query: 64  ILGSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 123
                     L  P  G         IGS G+RNF L  K + + + ED    +     R
Sbjct: 61  AFSD---FIALTVPLKG--------KIGSTGSRNFVLSNKLETQNL-EDSMMTTTTT--R 105

Query: 124 KASGSWKSWINKSLNMKIYSH 142
           K SG WK+W+NKS  + + SH
Sbjct: 121 KTSGRWKAWLNKSFGLMVPSH 105

The following BLAST results are available for this feature:

BLAST of CmaCh04G021250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XJ7	9.3e-05	34.34	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P...	[more]

BLAST of CmaCh04G021250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JP66	1.2e-74	100.00	uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111487636 PE...	[more]
A0A6J1H7B9	3.7e-73	98.58	uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A0A0KUW8	7.8e-63	87.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1	[more]
A0A6J1FHE7	3.0e-62	87.05	uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A1S4DSB9	3.9e-62	86.33	uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 P...	[more]

BLAST of CmaCh04G021250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990881.1	2.4e-74	100.00	uncharacterized protein At4g22758 [Cucurbita maxima]	[more]
XP_023521148.1	2.6e-73	99.29	uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo] >XP_02352114...	[more]
XP_022959923.1	7.7e-73	98.58	uncharacterized protein At4g22758-like [Cucurbita moschata]	[more]
KAG7032577.1	8.5e-72	98.56	hypothetical protein SDJN02_06626, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023540757.1	2.3e-69	85.37	uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G021250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70780.1	2.2e-46	64.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G23150.1	2.3e-43	63.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G37730.1	3.3e-21	44.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G27830.1	6.4e-09	33.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G01554.1	2.7e-07	32.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270:SF34	SUBFAMILY NOT NAMED	coord: 3..137
IPR040358	Uncharacterized protein At4g22758-like	PANTHER	PTHR33270	BNAC05G50380D PROTEIN	coord: 3..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G021250.1	CmaCh04G021250.1	mRNA