CmaCh04G021130 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G021130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr04: 14756721 .. 14759236 (-)
RNA-Seq Expression	CmaCh04G021130
Synteny	CmaCh04G021130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTAAACTTGACAAGAGCTGAGGGAACCAACTCCAGATCATCTAGTGTTTTAGTTTTCTCTCCTACTGCTGGAAAATGGGCGATTGTACGTCGTTTAACACCGACAGGTTGTATCAACTCGAACTCCAAACTCGGTTCTTTCAGTGCTGTGCTTACAAACTGCCAAGGAAGCAGACATTCATTCAGTTTTCGTTCCAACAGCCATGGAACCAAAAGATATGAAAATTGTGTATTGCAGAGATGGTTAGGGAATGACAAGTATGCTTACATACACAAGCACCCGCATAGAAAAGATCAATGATTACTAATGAGATTGTAGTTCAAAGGATGAATCAGAAAACAAAATTTTTCACCTTTGATAATCAAGACCACTCTACACACCACCAAACAATTATCAAGCTATTGGCTGAATGTGTGTTCTCGTTATTTCACTTGCTATGTTTAGTCAAGTATAATGTGAGATCCCATGTCGGCTGGGAGGAGAACGAAACATTTTATATAAGGGTGTGAAAACTTTTTCCTAAAAGACGCATTTTAAAAACCTTGAGAAGAAGTCTGAAAGGAAAAGTCTAAAGAAAACAATATCTGCTAGCGGTGGGCTTGGGCCGTTATAAATGGTATCAGAGCCAGACACTGAGGGATGTGTCAGCGAGAAGACTGAGCCCCGTAAGAGGGTGGACACGAGGCAGTGTGCTAGTAAGGACACTAAGCCTCGAAGGGGGTGGATTGGGGGGTCCACATTGATTGTAGAAGGAAACAAATGCTAGTGAGGACGCCAGGCTCTGAAGGGGAGTGGATTGTGAGATCCCACATCGGTTGGGAGGAGAAGGAAGCATTCTTTATAAGGGTGTAGAAACCTTTTTCTAAAAGACACGTTTTAATAACCTTGAAGGGAAGCCTGAAAGGGAAAGTCTAAAGAGAACAATATCCGCTAGCAGTGGGCATATAATGTCTAAATGGACCGCCACAAAAACAATAGTAGTAGACAAGAAGAAAGAAGTTGCCACAAATACTTCTCCTTTTCACTAGATTCGTTGGGAAATATATACCTATAATACTAACAAACGAGCAGTCACAAAACCATTTGAAGTCATTTGAAGGGGAGAAGGGATATCATACATTAAATTAAGCTTCAATGTTTAACTCAACGAATAGAGCTAACCTCATATAGAGCACTTGTTGGTTCCCAAGGAGAAAAAACCCCTTGAAGTACCACACCATCAGGAAACTGAATTCTGATCACTGTTCTATTGTACTTTCTCCGAGCAGCTTTGGCTTGCTTTTCCTTGTATGATTTGGGTACCAAAAGCTGAGATTCTGCAATCTTTTGCTTCCTCATTACAGCTTCTCTTTTAACCTCTTCAATAGAGAGTTTGTAAAATGAGTCTGGTAGCTCAATGTTTGCTGCAACGTTTTCAGGGATTGCAAAGAATACCCGAGTCTGAAAGTAATAAATCATCCAAAACATCAGCCGAGGAAGAGCTATGAACCACAAAAACGAAGTAAAATGGATACCCAAAAACAGGGTTCATTTTGCAATGGCTTGGAAAAGCTACAAAGGGTGACAGGAGACGCAACAAAAATTAAGGTTCCAAGAAAATAGGATTGGTAACTATAAATTTCTCAGTTAACCATACCTGTCTGTCTACCTTCTTTGGCTCAATCAGTTGATCAGTGGATGCAGTGCTGCTGCCTCTCTTTTCCTGTTCATCAAGCTTTGGTTGATCAATGGAATCTATTACCTTGCTTAGTATGTTAATTTCTTCCTCTGTCGGAATTTCCATGGTTGCCCACATTTCACCATCTTGTTCTTGCAATTTAAAACCTACAAACTCCAACAATTCCACTCCCCCGACAGCCTCGCCAATTGCCTCCTTAATTTTGGGATTACTCAGACGAATCTTCCTAAACTTTGAATTCTCTGGTTCCCGAATTATGTTCCTCAAAAGCGTAAGAATAATTTTCAGTGAACCTTGTGAGGGCTTACCTGACAAGAAAGTGCCAAGACAACCCTCCAATTCACTCGGGGATTCTGCATCATTTGTGAGCAGCAGATCTGCTGGTCTCCTGGCTGTATTATCATCGACACAGCTATCTACGTGCACCGAAACCTCTTCTTCCGACCTGTAATTTTGGCCACAAATCGGACATTCGAACACATTTAACGAATACCCATTTCCAGATTTTTTGCCAGATGTTATAAACGAGTCAAATGGGTCAAATCCATCAGCCGGGGAACGTTCTGGGCTCGATTTAATCGAGAGATGTGGCCGGGTTGGAGCCGCGGAAATTGAATTCGCTACCGGGGGCTTGACCAGATTCGGGTTTGAAATGGGATTGTGCAATGGGCGGGTAGGCAAAGAAGTGGTCGACCCGGAAGAAGACGATCCTAAAACTCTTCCCGGGCCCTTGAAACTGGTAGAAGAAGATGAGGTCAAGGGATTATTGAAGCGTTTCATGAAGCCCTTAACCTTGTCCTTCACATCACCCATGATAAGAAATCGTACGTGA

mRNA sequence

ATGGGTCTAAACTTGACAAGAGCTGAGGGAACCAACTCCAGATCATCTAGTGTTTTAGTTTTCTCTCCTACTGCTGGAAAATGGGCGATTGTACGTCGTTTAACACCGACAGATGTTATAAACGAGTCAAATGGGTCAAATCCATCAGCCGGGGAACGTTCTGGGCTCGATTTAATCGAGAGATGTGGCCGGGTTGGAGCCGCGGAAATTGAATTCGCTACCGGGGGCTTGACCAGATTCGGGTTTGAAATGGGATTGTGCAATGGGCGGGTAGGCAAAGAAGTGGTCGACCCGGAAGAAGACGATCCTAAAACTCTTCCCGGGCCCTTGAAACTGGTAGAAGAAGATGAGGTCAAGGGATTATTGAAGCGTTTCATGAAGCCCTTAACCTTGTCCTTCACATCACCCATGATAAGAAATCGTACGTGA

Coding sequence (CDS)

ATGGGTCTAAACTTGACAAGAGCTGAGGGAACCAACTCCAGATCATCTAGTGTTTTAGTTTTCTCTCCTACTGCTGGAAAATGGGCGATTGTACGTCGTTTAACACCGACAGATGTTATAAACGAGTCAAATGGGTCAAATCCATCAGCCGGGGAACGTTCTGGGCTCGATTTAATCGAGAGATGTGGCCGGGTTGGAGCCGCGGAAATTGAATTCGCTACCGGGGGCTTGACCAGATTCGGGTTTGAAATGGGATTGTGCAATGGGCGGGTAGGCAAAGAAGTGGTCGACCCGGAAGAAGACGATCCTAAAACTCTTCCCGGGCCCTTGAAACTGGTAGAAGAAGATGAGGTCAAGGGATTATTGAAGCGTTTCATGAAGCCCTTAACCTTGTCCTTCACATCACCCATGATAAGAAATCGTACGTGA

Protein sequence

MGLNLTRAEGTNSRSSSVLVFSPTAGKWAIVRRLTPTDVINESNGSNPSAGERSGLDLIERCGRVGAAEIEFATGGLTRFGFEMGLCNGRVGKEVVDPEEDDPKTLPGPLKLVEEDEVKGLLKRFMKPLTLSFTSPMIRNRT

Homology

[Close]

BLAST of CmaCh04G021130 vs. ExPASy TrEMBL
Match: A0A371EUU1 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_51053 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.4e-05
Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 81  GFEMGLCNGR---VGKEV--VDPEEDDPKTLPGPLKLVEEDEVKGLLKRFMKPLTLSFTS 140
           G  +G C G    VG E+  V+ EE++P+TLP PL L +++E KGLL  FM P  LSF S
Sbjct: 68  GLGLGFCVGMGRGVGLELVGVEEEEEEPRTLPWPLNLPDDEEEKGLLTFFMNPFILSFMS 127

Query: 141 PMIRNR 142
           P++ N+
Sbjct: 128 PIVENQ 133

[Close]

BLAST of CmaCh04G021130 vs. NCBI nr
Match: RDX69783.1 (hypothetical protein CR513_51053, partial [Mucuna pruriens])

HSP 1 Score: 57.8 bits (138), Expect = 9.0e-05
Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 81  GFEMGLCNGR---VGKEV--VDPEEDDPKTLPGPLKLVEEDEVKGLLKRFMKPLTLSFTS 140
           G  +G C G    VG E+  V+ EE++P+TLP PL L +++E KGLL  FM P  LSF S
Sbjct: 68  GLGLGFCVGMGRGVGLELVGVEEEEEEPRTLPWPLNLPDDEEEKGLLTFFMNPFILSFMS 127

Query: 141 PMIRNR 142
           P++ N+
Sbjct: 128 PIVENQ 133

The following BLAST results are available for this feature:

BLAST of CmaCh04G021130 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G021130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371EUU1	4.4e-05	46.97	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_51053 P...	[more]

BLAST of CmaCh04G021130 vs. NCBI nr


Match Name	E-value	Identity	Description
RDX69783.1	9.0e-05	46.97	hypothetical protein CR513_51053, partial [Mucuna pruriens]	[more]

BLAST of CmaCh04G021130 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G021130.1	CmaCh04G021130.1	mRNA