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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATACTTTTAAGAGTCCTATTGGTAATTGGTTAAAATGATATTTTGATTTTTATATTTTAACATTAGTTATATTTTAGTTTGCTTTTAATATATATTAAAATTAGTTGAACTTCAGAGAAAATATGCGGTACATGAATGAAAAGATACTGCAATCAAATGAAATGGGTCATAACAACAAAATAGTTAAGAAAAACTTAAAAGAATCGAAAGTCGTTATCTATACCAACAAGGTGCACGTTTTTTTCTTCTTCTTCAAGGGTTAAGTAATAGGAACTCTATGACTAAGCGTGAATTTTCGTAGAATGCATATGAGTGAGGACAAAACATATGGAAGAAGACTCTGTGTATATATGTAGAGATAGTTTTCACTCTTAAGAAATGATGCGCAGGTATCATGATCATGTCGGAAGAGGATTTTACAAGAGATGGGTCTAAGCTGGTACGGTAATTCAAAATTTTGTATGATGCACTCTATCTGTTTGATAAATTGCCTGAGAGACCAACGCGATTATCTATCACGTATTTGAACAGAATGTGTTATATTTCTTGTCCTTTTGGGGCTCCAAATGTGGCTATAAACTCATTGGTTGTGAAGAACATAGTCAAACAAAGATGCTAATTGCAGAATATGGGTGATTCAATTAGAGAATAAACCCAAATTTTGTATGTTGCTGTGATTTTCTTCACTCTTCTGCCATCTTTGTTGCATGTTTTTTTCCCACAACAAACGCTAGATCCACAATCTTATGTTGCTAGGCTGTTTGCGTAACATTAGCACTCTCTGAGGTAAAAACTTACGATTCTTCTCAAAAGACTTGGGAGTTCTTTCTTGGTATCATCGTTCCTTTCTCAAAATGTATGTGTTCAATTTCATTGCAGTATTACTATCACGTGGGATTCAAGATCGTAGATTTCTGGATTCCCCAATTGCTCAGAAGATCATGTGGGCTTCAAAGATGCTAAATTTCTGGATTTCCCAATATCTCAGAAGATCTGTGGGCTTCAAAGATTGTAGGTTTCTGGACGCTCTAAGTTAATCCAGAAAAAATACAGAAGCCAGAAACGTCATGTGTTTTGTTGTTTATATCATCATCCATCCATCCTACAAATCTGTCTTCCTTATTCTTTTGTTTTTGTCTCCTAATCTCTATGATAAGATCCATGTAAAGTTTGTTATGATCAGATCTATGCCACCGCCTTAGCCGCTGTCAATCAAGCATATCAATGGAACGGCAGTGATCTGCAGGTGCAGGGGAAGTACCATAGGCCGCGAAGCACATGA mRNA sequence ATGGATACTTTTAAGAGTCCTATTGTATTACTATCACGTGGGATTCAAGATCGTAGATTTCTGGATTCCCCAATTGCTCAGAAGATCATGTGGGCTTCAAAGATGCTAAATTTCTGGATTTCCCAATATCTCAGAAGATCTATCTATGCCACCGCCTTAGCCGCTGTCAATCAAGCATATCAATGGAACGGCAGTGATCTGCAGGTGCAGGGGAAGTACCATAGGCCGCGAAGCACATGA Coding sequence (CDS) ATGGATACTTTTAAGAGTCCTATTGTATTACTATCACGTGGGATTCAAGATCGTAGATTTCTGGATTCCCCAATTGCTCAGAAGATCATGTGGGCTTCAAAGATGCTAAATTTCTGGATTTCCCAATATCTCAGAAGATCTATCTATGCCACCGCCTTAGCCGCTGTCAATCAAGCATATCAATGGAACGGCAGTGATCTGCAGGTGCAGGGGAAGTACCATAGGCCGCGAAGCACATGA Protein sequence MDTFKSPIVLLSRGIQDRRFLDSPIAQKIMWASKMLNFWISQYLRRSIYATALAAVNQAYQWNGSDLQVQGKYHRPRST
Homology
BLAST of CmaCh04G021090 vs. NCBI nr
Match: KAG7032564.1 (hypothetical protein SDJN02_06613, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 14 GIQDRRFLDSPIAQKIMWASKMLNFWISQY-------LRRSIYATALAAVNQAYQWNGSD 73
G +D +FLD PIAQKI+WASK+++FW Q +R IYATALAAVNQA QWNGSD
Sbjct: 11 GSKDAKFLDFPIAQKIIWASKIVDFWTLQVNPGKYRSQKRHIYATALAAVNQADQWNGSD 70
Query: 74 LQVQGKYHRPRST 80
LQVQGKYHR RST
Sbjct: 71 LQVQGKYHRLRST 83
BLAST of CmaCh04G021090 vs. NCBI nr
Match: KAG6601850.1 (Nudix hydrolase 17, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04 Identity = 33/66 (50.00%), Postives = 36/66 (54.55%), Query Frame = 0
Query: 14 GIQDRRFLDSPIAQKIMWASKMLNFWISQYLRRSIYATALAAVNQAYQWNGSDLQVQGKY 73
G +D +FLD PIAQKI+ VNQA QWNGSDLQVQGKY
Sbjct: 214 GSKDAKFLDFPIAQKII-------------------------VNQADQWNGSDLQVQGKY 254
Query: 74 HRPRST 80
HR RST
Sbjct: 274 HRLRST 254
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG7032564.1 | 1.7e-16 | 67.12 | hypothetical protein SDJN02_06613, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6601850.1 | 1.1e-04 | 50.00 | Nudix hydrolase 17, mitochondrial, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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