CmaCh04G020920 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	leucine-rich repeat extensin-like protein 3
Location	Cma_Chr04: 14567889 .. 14568317 (-)
RNA-Seq Expression	CmaCh04G020920
Synteny	CmaCh04G020920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCACCCTCCTCCTTCTAATCTCACCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGTCTCAGCCACCCCCGCCGACCCCACAGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCGTCTACTACTCTCCCCCTCCCCCTAAGAAGGATCACAAGAACAACGACTGCCCACCGCCGCCGTCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAGAATTATAACGCTGCCGCCCGGAGACTCGTCTCCGCCGCAGCCTCCGCCGTGATTGGGTTGGCTGTTGCTGGGGTTCTGATGATATAA

mRNA sequence

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCACCCTCCTCCTTCTAATCTCACCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGTCTCAGCCACCCCCGCCGACCCCACAGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCGTCTACTACTCTCCCCCTCCCCCTAAGAAGGATCACAAGAACAACGACTGCCCACCGCCGCCGTCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAGAATTATAACGCTGCCGCCCGGAGACTCGTCTCCGCCGCAGCCTCCGCCGTGATTGGGTTGGCTGTTGCTGGGGTTCTGATGATATAA

Coding sequence (CDS)

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCACCCTCCTCCTTCTAATCTCACCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGTCTCAGCCACCCCCGCCGACCCCACAGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCGTCTACTACTCTCCCCCTCCCCCTAAGAAGGATCACAAGAACAACGACTGCCCACCGCCGCCGTCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAGAATTATAACGCTGCCGCCCGGAGACTCGTCTCCGCCGCAGCCTCCGCCGTGATTGGGTTGGCTGTTGCTGGGGTTCTGATGATATAA

Protein sequence

MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVYPSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAARRLVSAAASAVIGLAVAGVLMI

Homology

[Close]

BLAST of CmaCh04G020920 vs. ExPASy TrEMBL
Match: A0A6J1JNW0 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111487018 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.9e-66
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAA 120
           PSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAA
Sbjct: 61  PSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAA 120

Query: 121 RRLVSAAASAVIGLAVAGVLMI 143
           RRLVSAAASAVIGLAVAGVLMI
Sbjct: 121 RRLVSAAASAVIGLAVAGVLMI 142

[Close]

BLAST of CmaCh04G020920 vs. ExPASy TrEMBL
Match: A0A6J1GMY1 (extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 128/143 (89.51%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFL LLLLISPSSSSAAVRRLDD     TPADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDD-----TPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVVYYS-PPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAA 120
           PSPPPPSPPPPDVV+YYS PPPPKKDHKN+DCPPPP+PNFMYITGPPGDLYPIDQ+YNAA
Sbjct: 61  PSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA 120

Query: 121 ARRLVSAAASAVIGLAVAGVLMI 143
           +RRLVS AASAV+GLAVAGVLM+
Sbjct: 121 SRRLVSTAASAVVGLAVAGVLMM 138

[Close]

BLAST of CmaCh04G020920 vs. ExPASy TrEMBL
Match: A0A6J1DDL2 (acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.9e-42
Identity = 104/147 (70.75%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPS---SSSAAVRRLDDTP-VSATPADPTVKCSPCEQNPPSPPP 60
           MLP  SLLFL LLLLISPS   ++SAA R LD+ P V +T  DPTVKC+PC+QNPPSPPP
Sbjct: 1   MLPLKSLLFLNLLLLISPSATAAASAAARFLDEAPAVPSTTGDPTVKCAPCDQNPPSPPP 60

Query: 61  PPVYPSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPP-SPNFMYITGPPGDLYPIDQN 120
           PP+YPSPPPPSPPPPDV+ YYSPPPPKK   N++CPPPP  P+F YITGPPGDLYPIDQ+
Sbjct: 61  PPIYPSPPPPSPPPPDVLPYYSPPPPKKPKNNDNCPPPPYPPSFTYITGPPGDLYPIDQD 120

Query: 121 YNAAARRLVSAAASAVIGLAVAGVLMI 143
           YNAAAR L SAAA+AV+GL + G+ ++
Sbjct: 121 YNAAARTLTSAAAAAVVGLGLVGLFVV 147

[Close]

BLAST of CmaCh04G020920 vs. ExPASy TrEMBL
Match: A0A1S3CT22 (extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 107/145 (73.79%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSS--SSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPP 60
           MLP   LLFL  LLLISPSS  +SA VRRLDDT    TP DP VKC+PCEQNPPSPPPP 
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPL 60

Query: 61  VYPSPPPPSPPPPDVVVYYSPPPP-KKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYN 120
           VYPSPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPPSP+FMYITGPPGDLYPIDQNYN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYN 120

Query: 121 AAARRLVSAAASAVIGLAVAGVLMI 143
           AA RR   +AA+A +G+ +AG+L++
Sbjct: 121 AAGRR---SAAAAAVGVVLAGLLLV 139

[Close]

BLAST of CmaCh04G020920 vs. ExPASy TrEMBL
Match: A0A0A0KPJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.6e-39
Identity = 103/145 (71.03%), Postives = 117/145 (80.69%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSS--SSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPP 60
           MLP   LLFL  LLLISPSS  +S  VRRLDDT    TP DP VKC+PCEQNPPSPPPP 
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPV 60

Query: 61  VYPSPPPPSPPPPDVVVYYSPPPP-KKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYN 120
           VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPPSP+FMYITGPPGDLYPIDQ YN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYN 120

Query: 121 AAARRLVSAAASAVIGLAVAGVLMI 143
           AA RR    +A+ V+G+ +AG+L++
Sbjct: 121 AAGRR----SAATVVGVVLAGLLLV 138

[Close]

BLAST of CmaCh04G020920 vs. NCBI nr
Match: XP_022989990.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAA 120
           PSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAA
Sbjct: 61  PSPPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAA 120

Query: 121 RRLVSAAASAVIGLAVAGVLMI 143
           RRLVSAAASAVIGLAVAGVLMI
Sbjct: 121 RRLVSAAASAVIGLAVAGVLMI 142

[Close]

BLAST of CmaCh04G020920 vs. NCBI nr
Match: XP_023520933.1 (extensin [Cucurbita pepo subsp. pepo] >XP_023521360.1 extensin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.6 bits (592), Expect = 2.0e-57
Identity = 134/143 (93.71%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPS-PPPPPV 60
           MLPFNSLLFLTLLLLISPSSSSAAVRRLDD     TP DPTVKCSPCEQNPPS PPPPPV
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDD-----TPTDPTVKCSPCEQNPPSPPPPPPV 60

Query: 61  YPSPPPPSPPPPDVVVYYS-PPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNA 120
           YPSPPPPSPPPPDVV+YYS PPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNA
Sbjct: 61  YPSPPPPSPPPPDVVIYYSPPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNA 120

Query: 121 AARRLVSAAASAVIGLAVAGVLM 142
           AARRLVSAAASAVIGLAVAGVLM
Sbjct: 121 AARRLVSAAASAVIGLAVAGVLM 138

[Close]

BLAST of CmaCh04G020920 vs. NCBI nr
Match: KAG7032543.1 (hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.3 bits (586), Expect = 1.0e-56
Identity = 129/143 (90.21%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFL LLLLISPSSSSAAVRRLDD     TPADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDD-----TPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVVYYS-PPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAA 120
           PSPPPPSPPPPDVV+YYS PPPPKKDHKN+DCPPPP+PNFMYITGPPGDLYPIDQ+YNAA
Sbjct: 61  PSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA 120

Query: 121 ARRLVSAAASAVIGLAVAGVLMI 143
           +RRLVSAAASAV+GLAVAGVLM+
Sbjct: 121 SRRLVSAAASAVVGLAVAGVLMM 138

[Close]

BLAST of CmaCh04G020920 vs. NCBI nr
Match: KAG6601837.1 (hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.9 bits (585), Expect = 1.3e-56
Identity = 129/143 (90.21%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFL LLLLISPSSSSAAVRRLDD     TPADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDD-----TPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVVYYS-PPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAA 120
           PSPPPPSPPPPDVV+YYS PPPPKKDHKN+DCPPPP+PNFMYITGPPGDLYPIDQ+YNAA
Sbjct: 61  PSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA 120

Query: 121 ARRLVSAAASAVIGLAVAGVLMI 143
           ARRLVSAAASAV+GLAV GVLM+
Sbjct: 121 ARRLVSAAASAVVGLAVVGVLMM 138

[Close]

BLAST of CmaCh04G020920 vs. NCBI nr
Match: XP_022953268.1 (extensin [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 3.0e-56
Identity = 128/143 (89.51%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFL LLLLISPSSSSAAVRRLDD     TPADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDD-----TPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVVYYS-PPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAA 120
           PSPPPPSPPPPDVV+YYS PPPPKKDHKN+DCPPPP+PNFMYITGPPGDLYPIDQ+YNAA
Sbjct: 61  PSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA 120

Query: 121 ARRLVSAAASAVIGLAVAGVLMI 143
           +RRLVS AASAV+GLAVAGVLM+
Sbjct: 121 SRRLVSTAASAVVGLAVAGVLMM 138

[Close]

BLAST of CmaCh04G020920 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 66/141 (46.81%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 7   LLFLTLLLLISPSSSSAA---VRRLDDTPVSATPADPTVKCSP-CEQNPPSPPPPPVYPS 66
           +  LT   LI+ SSSS A    R+LD+        DP +KCSP C QNPP P PPP  PS
Sbjct: 19  IALLTCPTLINGSSSSDASLEARKLDE-------VDP-IKCSPSCIQNPPPPSPPP--PS 78

Query: 67  PPPPSPPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAA-R 126
           PPPP+ PPP  +    PPPPKK   ++ CPPPP  NF+YITGPPG+LYP+D+ + AAA +
Sbjct: 79  PPPPACPPPPAL---PPPPPKK--VSSYCPPPPPANFLYITGPPGNLYPVDEQFGAAAGK 138

Query: 127 RLVSAAASAVIGLAVAGVLMI 143
             +    S +I   +   L++
Sbjct: 139 SFMVVKLSGLIAFGIMAFLIL 144

[Close]

BLAST of CmaCh04G020920 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 63/141 (44.68%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 6   SLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVYPSPPP 65
           +++FLT  ++I+ S SS   R+L++ P         +KC+PC QN P P PPP  PSPPP
Sbjct: 56  TVVFLTFPMIINASDSSTN-RKLEEDP---------IKCTPCLQNIPPPSPPP--PSPPP 115

Query: 66  PS---PPPPDVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAARR 125
           PS   PPPP       P PPKK +    CPPPPS  ++Y+TGPPG+LYPIDQ + AA  +
Sbjct: 116 PSQACPPPP-----LPPSPPKKSY----CPPPPS-TYIYMTGPPGELYPIDQQFGAAVTK 174

Query: 126 LVSAA-ASAVIGLAVAGVLMI 143
             +    S +I   V   LMI
Sbjct: 176 SFTVVKISGLIAFGVMSFLMI 174

[Close]

BLAST of CmaCh04G020920 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.0e-07
Identity = 59/139 (42.45%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 8   LFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQN----PPSPPPPPVYPSP 67
           L  T+L+ I   +S   +   D +      A+  V C PC QN    PPSPPPP   PSP
Sbjct: 11  LAATILMAIVILASPIIINAEDSS------AEVDVNCIPCLQNQPPPPPSPPPPSCTPSP 70

Query: 68  PPPSPPPP-DVVVYYSPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAARR 127
           PPPSPPPP       SP PP         PPPP PN+++ T PPGDLYPI+  Y AA   
Sbjct: 71  PPPSPPPPKKSSCPPSPLPPP--------PPPPPPNYVF-TYPPGDLYPIENYYGAA--- 130

Query: 128 LVSAAASAVIGLAVAGVLM 142
            V+  + +V+ L V GV++
Sbjct: 131 -VAVESFSVMKLFVFGVMV 130

The following BLAST results are available for this feature:

BLAST of CmaCh04G020920 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G020920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNW0	9.9e-66	100.00	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GMY1	1.4e-56	89.51	extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1	[more]
A0A6J1DDL2	9.9e-42	70.75	acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1	[more]
A0A1S3CT22	1.3e-41	73.79	extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1	[more]
A0A0A0KPJ1	1.6e-39	71.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1	[more]

BLAST of CmaCh04G020920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989990.1	2.0e-65	100.00	leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]	[more]
XP_023520933.1	2.0e-57	93.71	extensin [Cucurbita pepo subsp. pepo] >XP_023521360.1 extensin-like [Cucurbita p...	[more]
KAG7032543.1	1.0e-56	90.21	hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6601837.1	1.3e-56	90.21	hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022953268.1	3.0e-56	89.51	extensin [Cucurbita moschata]	[more]

BLAST of CmaCh04G020920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	2.5e-13	46.81	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70990.1	1.1e-11	44.68	proline-rich family protein	[more]
AT1G02405.1	6.0e-07	42.45	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..78
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 7..140
None	No IPR available	PANTHER	PTHR35094:SF1	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 7..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020920.1	CmaCh04G020920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane