CmaCh04G020870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	histone chaperone ASF1B-like
Location	Cma_Chr04: 14468000 .. 14470410 (-)
RNA-Seq Expression	CmaCh04G020870
Synteny	CmaCh04G020870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATTCCATTTCCCTCCAAAAATTCCATCGGCGGCGATTTATATATAATCGACGAACTCAGTTGTTGGTTTTTCATTTGGGATCCATCTTCAACTTCAATAGTGCCTATAGTCGGCCATCGTTATTCCGTTCGGTCGTTGATGAGTGATCCCCGAATTAGGGTTAAGATCGATCAATTTGGGGAATCAATTACAGAGCTCCGTTCCGGTTTCTGGCGATGAGTGCCGTCAACATCACTAACGTCACCGTCTTGGATAACCCTGCCGCATTTCTGAATCCATTTCAGTTCGAGATCTCATATGAGTGCTTAACTCCGCTTAAAGACGGTATTCTGTTTTGTTTTGATAGATTGCATCAGTTTGGATGATGATTTGAATAGTTGATGTTGGGGTAATTAGATGTTGTCTTGAAATTATTTTATTGGATTCATCAGATTAAGAGTAGGATATTCCTAGTGTTTCGGCTTGTAAACTGGATATTTGCGTTTGGTTAATGATTTGTTTGCAATCGTTTCTCTACTCACATTTTGCGGAAGAAAACTTTATGCCCCTGATTCCTGTATCTGTTCGGATTTAATATTAAGTTCAAATCTCGTAACCTAACGCCTGTATTCTAACGATGTGTTTTTTCATGCTTAAATCCTGATTTTGATGCTTGAGCCTGGGTAGTATGTGATAGAAATTTGTCATTTCTACTCAGCTCTTTTGATATTGTTATCTTTGAAGGATATTTGTATGTATACTCCGTATATTAAAGATTCATATATGCCTTTTAACTCCTAATGCTCATGTCAAAAGTTCTTATTCATCCTCTTTGTATATTTTTTTCTTGTGGGTGGAGGTTTGGTTTAGAACGTTGAATACTAGATATAGTTAAATCAACACTAATTTTATAACTTAATCTATCATGTCAAGGCCAATCTCATAATTTGTGTTAATCATGATGTTTGGATTTTTCTTGAGTATTTAGTCCATAGTTCATTAGATGGTTGGGTAAGAGTTTAGTGTTACTAGAAAACCCAGATGATAATAGAACAAAAAATTATGTGCTCAAACTCTAGTAATTATTATTCTTTTTGGAGATTGATATTAAGAGTCACTTTTCTAGACTTACTAATTTTGAACCTAGATGTGACCAAAGTATTAAAAATATAAGTATAAGATCAATAGTCTATTAGCTTAAACTATAAATTATACTCAATCTATTGCACGTGATTTTGGATTTACGGGTCATTAATTTGATAAGAAACACTGCATTGTCATTTCTTCTCCAATAATACAAGTAATTATATGTTTATTTTGTAAATTTCTCAAGTTATTAGCTCAATGATCGATGTATTCTATTTTGGGTTTTGACTCAAATCAACTTTAATGACATGTTTTCTGTTTGATTATTCTACAGATCTAGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGATCAGCTTTTGGAGAGTGTGCTCGTTGGACCTGTTAACGTTGGCAACTACCGTTTTGTTCTTCAGGTATTATATGCCGGGTTCTTCACTAGTGACATTTTTAGCATGGCTTAAAAAGAAATCAAATTCCAGTTAAAATTTGAGTAATTCTTACAATTTAGTGATAGATTATCATATTTTTACTTGGGGGATTCGAACTTTTATCTTCTGATCCGAAAAAAAGTAGTCTTGGTCAAACATCGATCTATAGAGATACCTGATAAAATTTCACTCGTGTTGACTCAAATTTCTGCTCAAACTGGAATCTGACTGTTCTGAACTGGTACATTTGTTGGGATTGGAAATTTTGCAGGCAGACCCTCCGGATCCGTCAAAAATCCGGGAAGAAGACATCACGGGGGTCACAGTACTGTTGTTAACATGTTCATACATGGGACAAGAATTTATAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAGCTTCGTGAGGAACCTCCACCAAAAGTTTTGGTGGAAAGGATCCAAAGAAACATTCTTGCTGACAAGCCCAGAGTCACCAAGTTCCCAATCAATTTTCATCCGGAGAACTCTGAACATGGTGGAGAGCCAAATTCGTCTCCACCAGCTGAAACCATCAACAACGAAGAAGAAGAAGAATTGCAGGCATCGCCATTGCCATCGCCATTGCCATCGCCATCACCACCACCATCAGCTGCATCTGATGAACCATCTCTGGAACAGGATGCCGTTGATACTGAAGCTCAGCCCTCAGTCCGGCAACCTAAGGTTTGAGAGGTGATCCGTATTTGGTTACTTTTGCTCTTGTTTGTAATCTAAAGCAGTGAGGTAGATAATGTTAATCAGACCAGTTTGGGAATGTGCATTAGATTATAAGAATTTAGAGAGTATGATTTCATATTTTATTCTAAGTGAAAATTGTGATAATTCC

mRNA sequence

GACATTCCATTTCCCTCCAAAAATTCCATCGGCGGCGATTTATATATAATCGACGAACTCAGTTGTTGGTTTTTCATTTGGGATCCATCTTCAACTTCAATAGTGCCTATAGTCGGCCATCGTTATTCCGTTCGGTCGTTGATGAGTGATCCCCGAATTAGGGTTAAGATCGATCAATTTGGGGAATCAATTACAGAGCTCCGTTCCGGTTTCTGGCGATGAGTGCCGTCAACATCACTAACGTCACCGTCTTGGATAACCCTGCCGCATTTCTGAATCCATTTCAGTTCGAGATCTCATATGAGTGCTTAACTCCGCTTAAAGACGATCTAGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGATCAGCTTTTGGAGAGTGTGCTCGTTGGACCTGTTAACGTTGGCAACTACCGTTTTGTTCTTCAGGCAGACCCTCCGGATCCGTCAAAAATCCGGGAAGAAGACATCACGGGGGTCACAGTACTGTTGTTAACATGTTCATACATGGGACAAGAATTTATAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAGCTTCGTGAGGAACCTCCACCAAAAGTTTTGGTGGAAAGGATCCAAAGAAACATTCTTGCTGACAAGCCCAGAGTCACCAAGTTCCCAATCAATTTTCATCCGGAGAACTCTGAACATGGTGGAGAGCCAAATTCGTCTCCACCAGCTGAAACCATCAACAACGAAGAAGAAGAAGAATTGCAGGCATCGCCATTGCCATCGCCATTGCCATCGCCATCACCACCACCATCAGCTGCATCTGATGAACCATCTCTGGAACAGGATGCCGTTGATACTGAAGCTCAGCCCTCAGTCCGGCAACCTAAGGTTTGAGAGGTGATCCGTATTTGGTTACTTTTGCTCTTGTTTGTAATCTAAAGCAGTGAGGTAGATAATGTTAATCAGACCAGTTTGGGAATGTGCATTAGATTATAAGAATTTAGAGAGTATGATTTCATATTTTATTCTAAGTGAAAATTGTGATAATTCC

Coding sequence (CDS)

ATGAGTGCCGTCAACATCACTAACGTCACCGTCTTGGATAACCCTGCCGCATTTCTGAATCCATTTCAGTTCGAGATCTCATATGAGTGCTTAACTCCGCTTAAAGACGATCTAGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGATCAGCTTTTGGAGAGTGTGCTCGTTGGACCTGTTAACGTTGGCAACTACCGTTTTGTTCTTCAGGCAGACCCTCCGGATCCGTCAAAAATCCGGGAAGAAGACATCACGGGGGTCACAGTACTGTTGTTAACATGTTCATACATGGGACAAGAATTTATAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAGCTTCGTGAGGAACCTCCACCAAAAGTTTTGGTGGAAAGGATCCAAAGAAACATTCTTGCTGACAAGCCCAGAGTCACCAAGTTCCCAATCAATTTTCATCCGGAGAACTCTGAACATGGTGGAGAGCCAAATTCGTCTCCACCAGCTGAAACCATCAACAACGAAGAAGAAGAAGAATTGCAGGCATCGCCATTGCCATCGCCATTGCCATCGCCATCACCACCACCATCAGCTGCATCTGATGAACCATCTCTGGAACAGGATGCCGTTGATACTGAAGCTCAGCCCTCAGTCCGGCAACCTAAGGTTTGA

Protein sequence

MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDEQLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVRQPKV

Homology

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BLAST of CmaCh04G020870 vs. ExPASy Swiss-Prot
Match: Q9LS09 (Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.1e-79
Identity = 145/179 (81.01%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLT LKDDLEWKL YVGSAEDETYDQ+LESV
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSE--HGGEPNSSPPAETINNEE 178
           QLREEPP KVL++++QRNIL DKPRVTKFPINFHPEN +    G   + P A+++ N E
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTEPFADSVVNGE 179

[Close]

BLAST of CmaCh04G020870 vs. ExPASy Swiss-Prot
Match: Q9C9M6 (Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.4e-76
Identity = 141/198 (71.21%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSA+ ITNV VL NPA F++PFQFEISYECL  LKDDLEWKL YVGSAEDETYDQLLESV
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE 180
           QL+EEPP KVL++++QRNIL+DKPRVTKFPI+FHPE  +      ++PP ++   +    
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAA--TAAPPEQSDEQQPNVN 180

Query: 181 LQASPLPSPLPSPSPPPS 199
            +A  LP     P P  S
Sbjct: 181 GEAQVLPDQSVEPKPEES 196

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BLAST of CmaCh04G020870 vs. ExPASy Swiss-Prot
Match: Q9V464 (Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-55
Identity = 108/200 (54.00%), Postives = 142/200 (71.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V+ITNV VLDNP++F NPFQFE+++EC+  LK+DLEWK+ YVGSAE E +DQ+L+++
Sbjct: 1   MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTI 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
            VGPV  G + FV QADPPD SKI E D  GVT++LLTCSY GQEF+RVGYYVNNDY D 
Sbjct: 61  YVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADP 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINF---HPENSEHGGE-----------PNS 180
           ++RE PP K L E++ RNILA KPRVT+F IN+   H   + +G E           P++
Sbjct: 121 EMRENPPTKPLFEKLTRNILASKPRVTRFKINWDYGHINGNGNGVENGHQDEMATDGPST 180

Query: 181 SPPAETINNEEEEELQASPL 187
           S  A  + + E++   A P+
Sbjct: 181 SEAASAVIHPEDDNSLAMPM 200

[Close]

BLAST of CmaCh04G020870 vs. ExPASy Swiss-Prot
Match: Q6BYE5 (Histone chaperone ASF1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=ASF1 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52
Identity = 100/180 (55.56%), Postives = 133/180 (73.89%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MS V++  + VL+NPA F +P++FEI++ECL PLK+DLEWKLTYVGS+    +DQ L+S+
Sbjct: 1   MSIVSLLGIEVLNNPAKFTDPYEFEITFECLEPLKEDLEWKLTYVGSSRSLDHDQELDSI 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPV VG  +F+ QADPP P  I   ++  VTV+LL+CSY  +EF+RVGYYVNN+YD E
Sbjct: 61  LVGPVPVGINKFLFQADPPSPELIPASELVSVTVILLSCSYADREFVRVGYYVNNEYDSE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE 180
           +LRE PP KV VE + RNILA+KPRVT+F I +  E+    G  +  PP + ++ EEEEE
Sbjct: 121 ELRENPPAKVQVEHVVRNILAEKPRVTRFNIVWDNED----GNADEYPPEQQVDEEEEEE 176

[Close]

BLAST of CmaCh04G020870 vs. ExPASy Swiss-Prot
Match: Q2KIG1 (Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.2e-52
Identity = 99/169 (58.58%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V + NV VLDNP+ F NPFQFEI++EC+  L +DLEWK+ YVGSAE E YDQ+L+SV
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPV  G + FV QAD P+P  I + D  GVTV+L+TC+Y GQEFIRVGYYVNN+Y + 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPP 170
           +LRE PP K    ++QRNILA  PRVT+F IN+  +N+E   +  SS P
Sbjct: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWE-DNTEKLEDAESSNP 168

[Close]

BLAST of CmaCh04G020870 vs. ExPASy TrEMBL
Match: A0A6J1JNV5 (probable histone chaperone ASF1A OS=Cucurbita maxima OX=3661 GN=LOC111487014 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE 180
           QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE 180

Query: 181 LQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVRQPKV 225
           LQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVRQPKV
Sbjct: 181 LQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVRQPKV 224

[Close]

BLAST of CmaCh04G020870 vs. ExPASy TrEMBL
Match: A0A6J1GNK0 (probable histone chaperone ASF1A OS=Cucurbita moschata OX=3662 GN=LOC111455553 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.9e-112
Identity = 213/221 (96.38%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINN--EEE 180
           QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGE NSSPPAE INN  EEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSSPPAEAINNEEEEE 180

Query: 181 EELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 220
           EELQA    SPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV
Sbjct: 181 EELQA----SPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 217

[Close]

BLAST of CmaCh04G020870 vs. ExPASy TrEMBL
Match: A0A5A7TY70 (Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00060 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.5e-95
Identity = 184/223 (82.51%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPP---AETINNEE 180
           QLREEPPPKVL++R+QRNILADKPRVTKFPINFHPENSEHG E   S P   AE +NNEE
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSAEALNNEE 180

Query: 181 EEELQASPLPSPLPSPSPPPSA-ASDEPSLEQDAVDTEAQPSV 220
           E +              PPPSA A+DEP L+Q+A+D+  QPSV
Sbjct: 181 ELQ--------------PPPSASAADEPPLDQEAIDSGPQPSV 209

[Close]

BLAST of CmaCh04G020870 vs. ExPASy TrEMBL
Match: A0A1S3CSW5 (probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.5e-95
Identity = 184/223 (82.51%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPP---AETINNEE 180
           QLREEPPPKVL++R+QRNILADKPRVTKFPINFHPENSEHG E   S P   AE +NNEE
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSAEALNNEE 180

Query: 181 EEELQASPLPSPLPSPSPPPSA-ASDEPSLEQDAVDTEAQPSV 220
           E +              PPPSA A+DEP L+Q+A+D+  QPSV
Sbjct: 181 ELQ--------------PPPSASAADEPPLDQEAIDSGPQPSV 209

[Close]

BLAST of CmaCh04G020870 vs. ExPASy TrEMBL
Match: A0A6J1DFK2 (histone chaperone ASF1B-like OS=Momordica charantia OX=3673 GN=LOC111020036 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.4e-95
Identity = 188/224 (83.93%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHG---GEPNSSPP---AETIN 180
           QLREEPPPKV ++RIQRNILADKPRVTKFPINFHPENSE G   GE  SSPP   AETIN
Sbjct: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180

Query: 181 NEEEEELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPS 219
           NEEE  LQ  P PS           A+++PSL  DA+D+E QPS
Sbjct: 181 NEEEGNLQLPPSPS-----------AAEDPSL--DAIDSEPQPS 211

[Close]

BLAST of CmaCh04G020870 vs. NCBI nr
Match: XP_022989985.1 (probable histone chaperone ASF1A [Cucurbita maxima])

HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE 180
           QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE 180

Query: 181 LQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVRQPKV 225
           LQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVRQPKV
Sbjct: 181 LQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVRQPKV 224

[Close]

BLAST of CmaCh04G020870 vs. NCBI nr
Match: XP_023520819.1 (probable histone chaperone ASF1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.9 bits (1073), Expect = 5.4e-113
Identity = 215/220 (97.73%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINN-EEEE 180
           QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGE NSSPPAE INN EEEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSSPPAEAINNEEEEE 180

Query: 181 ELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 220
           ELQASPLPS  PSPSPPPSAASDEPSLEQDAVDTEAQPSV
Sbjct: 181 ELQASPLPS--PSPSPPPSAASDEPSLEQDAVDTEAQPSV 218

[Close]

BLAST of CmaCh04G020870 vs. NCBI nr
Match: KAG6601833.1 (Histone chaperone ASF1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032538.1 Histone chaperone ASF1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 413.7 bits (1062), Expect = 1.0e-111
Identity = 213/221 (96.38%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINN--EEE 180
           QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGE NSSPPAE INN  EEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSSPPAEAINNEEEEE 180

Query: 181 EELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 220
           EELQA    SPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV
Sbjct: 181 EELQA----SPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 217

[Close]

BLAST of CmaCh04G020870 vs. NCBI nr
Match: XP_022953035.1 (probable histone chaperone ASF1A [Cucurbita moschata])

HSP 1 Score: 413.7 bits (1062), Expect = 1.0e-111
Identity = 213/221 (96.38%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINN--EEE 180
           QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGE NSSPPAE INN  EEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSSPPAEAINNEEEEE 180

Query: 181 EELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 220
           EELQA    SPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV
Sbjct: 181 EELQA----SPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 217

[Close]

BLAST of CmaCh04G020870 vs. NCBI nr
Match: XP_023520975.1 (probable histone chaperone ASF1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.9 bits (1047), Expect = 5.6e-110
Identity = 212/221 (95.93%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINN-EEEE 180
           QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGE NSSPP E INN EEEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSSPPVEAINNEEEEE 180

Query: 181 ELQASPLPSPLPSPSPPPSA-ASDEPSLEQDAVDTEAQPSV 220
           ELQA    SPLPSPSPPPSA ASDEPSLEQDAVDTEAQPSV
Sbjct: 181 ELQA----SPLPSPSPPPSATASDEPSLEQDAVDTEAQPSV 217

[Close]

BLAST of CmaCh04G020870 vs. TAIR 10
Match: AT5G38110.1 (anti- silencing function 1b )

HSP 1 Score: 296.2 bits (757), Expect = 2.2e-80
Identity = 145/179 (81.01%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLT LKDDLEWKL YVGSAEDETYDQ+LESV
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSE--HGGEPNSSPPAETINNEE 178
           QLREEPP KVL++++QRNIL DKPRVTKFPINFHPEN +    G   + P A+++ N E
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTEPFADSVVNGE 179

[Close]

BLAST of CmaCh04G020870 vs. TAIR 10
Match: AT1G66740.1 (ASF1 like histone chaperone )

HSP 1 Score: 284.6 bits (727), Expect = 6.7e-77
Identity = 141/198 (71.21%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSA+ ITNV VL NPA F++PFQFEISYECL  LKDDLEWKL YVGSAEDETYDQLLESV
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSSPPAETINNEEEEE 180
           QL+EEPP KVL++++QRNIL+DKPRVTKFPI+FHPE  +      ++PP ++   +    
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAA--TAAPPEQSDEQQPNVN 180

Query: 181 LQASPLPSPLPSPSPPPS 199
            +A  LP     P P  S
Sbjct: 181 GEAQVLPDQSVEPKPEES 196

The following BLAST results are available for this feature:

BLAST of CmaCh04G020870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS09	3.1e-79	81.01	Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1	[more]
Q9C9M6	9.4e-76	71.21	Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 S...	[more]
Q9V464	2.4e-55	54.00	Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1	[more]
Q6BYE5	1.1e-52	55.56	Histone chaperone ASF1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / B...	[more]
Q2KIG1	4.2e-52	58.58	Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1	[more]

BLAST of CmaCh04G020870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNV5	1.2e-121	100.00	probable histone chaperone ASF1A OS=Cucurbita maxima OX=3661 GN=LOC111487014 PE=...	[more]
A0A6J1GNK0	4.9e-112	96.38	probable histone chaperone ASF1A OS=Cucurbita moschata OX=3662 GN=LOC111455553 P...	[more]
A0A5A7TY70	2.5e-95	82.51	Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CSW5	2.5e-95	82.51	probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV...	[more]
A0A6J1DFK2	9.4e-95	83.93	histone chaperone ASF1B-like OS=Momordica charantia OX=3673 GN=LOC111020036 PE=3...	[more]

BLAST of CmaCh04G020870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989985.1	2.4e-121	100.00	probable histone chaperone ASF1A [Cucurbita maxima]	[more]
XP_023520819.1	5.4e-113	97.73	probable histone chaperone ASF1A [Cucurbita pepo subsp. pepo]	[more]
KAG6601833.1	1.0e-111	96.38	Histone chaperone ASF1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG703...	[more]
XP_022953035.1	1.0e-111	96.38	probable histone chaperone ASF1A [Cucurbita moschata]	[more]
XP_023520975.1	5.6e-110	95.93	probable histone chaperone ASF1A [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G020870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38110.1	2.2e-80	81.01	anti- silencing function 1b	[more]
AT1G66740.1	6.7e-77	71.21	ASF1 like histone chaperone	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006818	Histone chaperone ASF1-like	PFAM	PF04729	ASF1_hist_chap	coord: 1..153 e-value: 1.6E-69 score: 232.7
IPR006818	Histone chaperone ASF1-like	PANTHER	PTHR12040	ANTI-SILENCING PROTEIN 1	coord: 1..185
IPR036747	Histone chaperone ASF1-like superfamily	GENE3D	2.60.40.1490		coord: 1..157 e-value: 6.6E-76 score: 255.4
IPR036747	Histone chaperone ASF1-like superfamily	SUPERFAMILY	101546	ASF1-like	coord: 1..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..200
None	No IPR available	PANTHER	PTHR12040:SF18	HISTONE CHAPERONE ASF1B-RELATED	coord: 1..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020870.1	CmaCh04G020870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006335	DNA replication-dependent chromatin assembly
biological_process	GO:0006336	DNA replication-independent chromatin assembly
biological_process	GO:0006333	chromatin assembly or disassembly
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding