CmaCh04G020710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	chaperone protein dnaJ 15-like isoform X1
Location	Cma_Chr04: 14087901 .. 14088283 (-)
RNA-Seq Expression	CmaCh04G020710
Synteny	CmaCh04G020710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTGAAACCAAAGGTTTGTTATAACTTCACTGTCAGTCTGCCATTAAGCTTATTACATTTTTATTTACGTAAACAAAGTGAGTTGTATTGTACATTTGGATTCCAATTACACAAAGTTGTTTATGTTTATTATATGGATATGCTCTCTGTACTTCTGAAAGTTTTGAAACTCAGGTGGGCGAGCTTCTCACACAACAGGATGGCATACACGCTTCATTCACTCACAAGCACCGAATCATATCGGAACTGGTGTTACGAGCAATGGAAGTAGTAGTAAATCTACTGGCGACAATTCGAAGGTTGAGAATCAAGGAGACGATGGGACCTCAGATGAAAAAGAAAGATCTTTTAAAAAGAGATGGTTCAATACTCCTTGA

mRNA sequence

ATGGGGATTGAAACCAAAGGTGGGCGAGCTTCTCACACAACAGGATGGCATACACGCTTCATTCACTCACAAGCACCGAATCATATCGGAACTGGTGTTACGAGCAATGGAAGTAGTAGTAAATCTACTGGCGACAATTCGAAGGTTGAGAATCAAGGAGACGATGGGACCTCAGATGAAAAAGAAAGATCTTTTAAAAAGAGATGGTTCAATACTCCTTGA

Coding sequence (CDS)

ATGGGGATTGAAACCAAAGGTGGGCGAGCTTCTCACACAACAGGATGGCATACACGCTTCATTCACTCACAAGCACCGAATCATATCGGAACTGGTGTTACGAGCAATGGAAGTAGTAGTAAATCTACTGGCGACAATTCGAAGGTTGAGAATCAAGGAGACGATGGGACCTCAGATGAAAAAGAAAGATCTTTTAAAAAGAGATGGTTCAATACTCCTTGA

Protein sequence

MGIETKGGRASHTTGWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP

Homology

[Close]

BLAST of CmaCh04G020710 vs. ExPASy TrEMBL
Match: A0A6J1H7I2 (chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460282 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+SKVENQGDDGTSDEKERSFKKRWFN P
Sbjct: 346 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIP 404

[Close]

BLAST of CmaCh04G020710 vs. ExPASy TrEMBL
Match: A0A6J1H5H3 (chaperone protein dnaJ 15-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111460282 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+SKVENQGDDGTSDEKERSFKKRWFN P
Sbjct: 329 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIP 387

[Close]

BLAST of CmaCh04G020710 vs. ExPASy TrEMBL
Match: A0A6J1I9M3 (chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470492 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.1e-15
Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+S VENQGDDGTSDEKERSFKKRWFN P
Sbjct: 346 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSNVENQGDDGTSDEKERSFKKRWFNIP 404

[Close]

BLAST of CmaCh04G020710 vs. ExPASy TrEMBL
Match: A0A6J1I833 (chaperone protein dnaJ 15-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470492 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.1e-15
Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+S VENQGDDGTSDEKERSFKKRWFN P
Sbjct: 329 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSNVENQGDDGTSDEKERSFKKRWFNIP 387

[Close]

BLAST of CmaCh04G020710 vs. ExPASy TrEMBL
Match: A0A6J1FFH1 (chaperone protein dnaJ 15-like OS=Cucurbita moschata OX=3662 GN=LOC111445252 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  +++ NHIG G TSNG+SSKSTGD+SKV+NQG+DGTSDEK++SFKKRWF  P
Sbjct: 346 GIHASFTVTKSSNHIGAGATSNGTSSKSTGDDSKVDNQGEDGTSDEKDKSFKKRWFGMP 404

[Close]

BLAST of CmaCh04G020710 vs. NCBI nr
Match: XP_022959273.1 (chaperone protein dnaJ 15-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+SKVENQGDDGTSDEKERSFKKRWFN P
Sbjct: 329 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIP 387

[Close]

BLAST of CmaCh04G020710 vs. NCBI nr
Match: XP_022959239.1 (chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959249.1 chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959258.1 chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959265.1 chaperone protein dnaJ 15-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+SKVENQGDDGTSDEKERSFKKRWFN P
Sbjct: 346 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIP 404

[Close]

BLAST of CmaCh04G020710 vs. NCBI nr
Match: XP_023531817.1 (chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo] >XP_023531825.1 chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo] >XP_023531832.1 chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+SKVENQGDDGTSDEKERSFKKRWFN P
Sbjct: 346 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIP 404

[Close]

BLAST of CmaCh04G020710 vs. NCBI nr
Match: KAG6601819.1 (Chaperone protein dnaJ 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+SKVENQGDDGTSDEKERSFKKRWFN P
Sbjct: 366 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIP 424

[Close]

BLAST of CmaCh04G020710 vs. NCBI nr
Match: KAG7032524.1 (Chaperone protein dnaJ 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 15  GWHTRFIHSQAPNHIGTGVTSNGSSSKSTGDNSKVENQGDDGTSDEKERSFKKRWFNTP 74
           G H  F  ++APN IG GVTSNGSSSKSTGD+SKVENQGDDGTSDEKERSFKKRWFN P
Sbjct: 346 GIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIP 404

The following BLAST results are available for this feature:

BLAST of CmaCh04G020710 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G020710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7I2	1.1e-15	81.36	chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1H5H3	1.1e-15	81.36	chaperone protein dnaJ 15-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1I9M3	4.1e-15	79.66	chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1I833	4.1e-15	79.66	chaperone protein dnaJ 15-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FFH1	1.5e-12	67.80	chaperone protein dnaJ 15-like OS=Cucurbita moschata OX=3662 GN=LOC111445252 PE=...	[more]

BLAST of CmaCh04G020710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959273.1	2.2e-15	81.36	chaperone protein dnaJ 15-like isoform X3 [Cucurbita moschata]	[more]
XP_022959239.1	2.2e-15	81.36	chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959249.1 c...	[more]
XP_023531817.1	2.2e-15	81.36	chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo] >XP_023531825.1 chap...	[more]
KAG6601819.1	2.2e-15	81.36	Chaperone protein dnaJ 15, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032524.1	2.2e-15	81.36	Chaperone protein dnaJ 15 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh04G020710 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020710.1	CmaCh04G020710.1	mRNA