CmaCh04G020700 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger protein GIS3-like
Location	Cma_Chr04: 13998165 .. 13998824 (-)
RNA-Seq Expression	CmaCh04G020700
Synteny	CmaCh04G020700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTTAGACCATTTCCAAACCAAACCAAACAATAATAACCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATTTTGAAGACGATTCTGGCCGAACTCCATCTGGGTCGTCGGACTCCGGCGGCGGCGGTGTTGGAGGCGGAGGAGGAGGCGCCGCCGCAGCCGCATCCGGTGAGAGGAAATACGAGTGTCAATACTGTTATAGAGAGTTTGCTAACTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAAAAAGAGCGTCAGCAACTCAAACGCGCTCAATTACAAGCCTCTAGAAACGCCGCTGTTTTAAGAAACCCCATAGTCTCCGCCTTTTCTCCGCCGCTTCACCTCCTCCCTTCTCCCGCCGCCACGTCATCCGCTTCTTGGGTCTATATGCCCCGTGCTCCACCCCAATTCCAAGTCTCCCATGGTAGCGTCTTCACACCGGCATACGTCGAGGCTCCGCCGCAGCCACCACCACCGTCTGCGGCGGCTTTTTTCTCAATTGGGTCTCGATCAGCTCATGGGATGGTGGACGGCCCGTCGCTTAGCCGATTCTCGAAGGCGGAGGGTGGATCCGGGATCGACGACGGTCCTGGCTTGGATTTACATCTCAGCCTTGCTCCGGCAGCGCCATGA

mRNA sequence

ATGGCTGCCTTAGACCATTTCCAAACCAAACCAAACAATAATAACCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATTTTGAAGACGATTCTGGCCGAACTCCATCTGGGTCGTCGGACTCCGGCGGCGGCGGTGTTGGAGGCGGAGGAGGAGGCGCCGCCGCAGCCGCATCCGGTGAGAGGAAATACGAGTGTCAATACTGTTATAGAGAGTTTGCTAACTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAAAAAGAGCGTCAGCAACTCAAACGCGCTCAATTACAAGCCTCTAGAAACGCCGCTGTTTTAAGAAACCCCATAGTCTCCGCCTTTTCTCCGCCGCTTCACCTCCTCCCTTCTCCCGCCGCCACGTCATCCGCTTCTTGGGTCTATATGCCCCGTGCTCCACCCCAATTCCAAGTCTCCCATGGTAGCGTCTTCACACCGGCATACGTCGAGGCTCCGCCGCAGCCACCACCACCGTCTGCGGCGGCTTTTTTCTCAATTGGGTCTCGATCAGCTCATGGGATGGTGGACGGCCCGTCGCTTAGCCGATTCTCGAAGGCGGAGGGTGGATCCGGGATCGACGACGGTCCTGGCTTGGATTTACATCTCAGCCTTGCTCCGGCAGCGCCATGA

Coding sequence (CDS)

ATGGCTGCCTTAGACCATTTCCAAACCAAACCAAACAATAATAACCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATTTTGAAGACGATTCTGGCCGAACTCCATCTGGGTCGTCGGACTCCGGCGGCGGCGGTGTTGGAGGCGGAGGAGGAGGCGCCGCCGCAGCCGCATCCGGTGAGAGGAAATACGAGTGTCAATACTGTTATAGAGAGTTTGCTAACTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAAAAAGAGCGTCAGCAACTCAAACGCGCTCAATTACAAGCCTCTAGAAACGCCGCTGTTTTAAGAAACCCCATAGTCTCCGCCTTTTCTCCGCCGCTTCACCTCCTCCCTTCTCCCGCCGCCACGTCATCCGCTTCTTGGGTCTATATGCCCCGTGCTCCACCCCAATTCCAAGTCTCCCATGGTAGCGTCTTCACACCGGCATACGTCGAGGCTCCGCCGCAGCCACCACCACCGTCTGCGGCGGCTTTTTTCTCAATTGGGTCTCGATCAGCTCATGGGATGGTGGACGGCCCGTCGCTTAGCCGATTCTCGAAGGCGGAGGGTGGATCCGGGATCGACGACGGTCCTGGCTTGGATTTACATCTCAGCCTTGCTCCGGCAGCGCCATGA

Protein sequence

MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP

Homology

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BLAST of CmaCh04G020700 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.1e-40
Identity = 124/243 (51.03%), Postives = 142/243 (58.44%), Query Frame = 0


Query: 12  NNNNPTTRLKLFGFDV--QEDFEDDS------------GRTPSGSSDSGGGGV---GGGG 71
           ++   T+RLKLFGF V  +EDF D S            G  P+GSS   GGGV   GGGG
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 72  GGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV----- 131
           GG      GERKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA      
Sbjct: 67  GG------GERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNA 126

Query: 132 ------LRNPIVSAFSPPLHLLPSPAATS--SASWVYMPR-APPQFQVSHGSVFTP---- 191
                 LRNPIVSAF+PP HLL S A        W+Y+PR +P Q  VSHG V       
Sbjct: 127 GSASQFLRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSGG 186

Query: 192 AYVEAPPQPPPPSAAAFFSIGSRSAHGMVDG--PSLSRFSKAEGGSGIDDGPGLDLHLSL 218
           A             + F  +G++  H    G  PS++ FS+ E G+  DDG GLDLHLSL
Sbjct: 187 AGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSL 242

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BLAST of CmaCh04G020700 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 88/225 (39.11%), Postives = 106/225 (47.11%), Query Frame = 0


Query: 17  TTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAAASGERKYECQYCYREF 76
           T+ LKLFG ++ E        T S  + S     G G G      S  RKYECQYC REF
Sbjct: 5   TSSLKLFGINLLE--------TTSVQNQSSEPRPGSGSG------SESRKYECQYCCREF 64

Query: 77  ANSQALGGHQNAHKKERQQLKRAQLQASR------NAAVLRNPIVSAFSPPLHLLPSP-- 136
           ANSQALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAF+P  HLL  P  
Sbjct: 65  ANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHP 124

Query: 137 -------AATSSASWVYMPRAPPQFQVS--HGSVFTPAYVEAPPQPPPPSAAAFFSIGSR 196
                   ++SS+ W+Y      Q  V   HG                      +  G  
Sbjct: 125 PPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHG------------------GRGLYGGGME 184

Query: 197 SAHGMVDG-----PSLSRF---SKAEGGSGIDDGPGLDLHLSLAP 217
           S  G V       P + RF   S    G  +++G GLDLHLSL P
Sbjct: 185 SMAGEVKTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

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BLAST of CmaCh04G020700 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 20  LKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAAASGERKYECQYCYREFANS 79
           +KLFGF++          T    S S              + +  +++ECQYC +EFANS
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTN----------TTSLTVMKRHECQYCGKEFANS 82

Query: 80  QALGGHQNAHKKERQQLKRAQLQASR 106
           QALGGHQNAHKKER + KR QLQA R
Sbjct: 83  QALGGHQNAHKKERLKKKRLQLQARR 98

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BLAST of CmaCh04G020700 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.9e-07
Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 12  NNNNPTTR-LKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAAASGERKYECQ 71
           N+ +P  R ++LFGF+     E+   +     ++            +    + E++++C 
Sbjct: 10  NSFSPKERPIRLFGFEFGASHEESESKDNYNENNE-----------SIKDDNKEKRFKCH 69

Query: 72  YCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNA 108
           YC+R F  SQALGGHQNAHK+ERQQ KR  L ++  A
Sbjct: 70  YCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNAAA 95

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BLAST of CmaCh04G020700 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06
Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 62  SGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP-IVSAFSP 121
           +  R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  + +  +     +P  +  F  
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLN 149

Query: 122 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVE----APPQPPPPS 170
             H    P+ T+ A   Y            G   TP+Y      APP   PP+
Sbjct: 150 NHHHRHYPSWTTEARSYY----------GGGGHQTPSYYSRNTLAPPSSNPPT 192

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BLAST of CmaCh04G020700 vs. ExPASy TrEMBL
Match: A0A6J1I2Z4 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111470485 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAA 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAA
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAA 60

Query: 61  ASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSP 120
           ASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSP
Sbjct: 61  ASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSP 120

Query: 121 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRS 180
           PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRS
Sbjct: 121 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRS 180

Query: 181 AHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           AHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP
Sbjct: 181 AHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 219

[Close]

BLAST of CmaCh04G020700 vs. ExPASy TrEMBL
Match: A0A6J1HEU6 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111462831 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 217/226 (96.02%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV-------GGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV       GGG
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  GGGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120
           GGG AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP
Sbjct: 61  GGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120

Query: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180
           IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF
Sbjct: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180

Query: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           FSIGSRSAHGMVDGPSLSRFSKAEGGSG DDGPGLDLHLSLAPAAP
Sbjct: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 226

[Close]

BLAST of CmaCh04G020700 vs. ExPASy TrEMBL
Match: A0A6J1FFV2 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.5e-76
Identity = 165/222 (74.32%), Postives = 175/222 (78.83%), Query Frame = 0


Query: 1   MAAL-DHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAA 60
           MAAL +H+Q+K   NNPTTRLKLFGFDVQED EDDS  TPS SSDS           AAA
Sbjct: 1   MAALEEHYQSK-QTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDS-----------AAA 60

Query: 61  AASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFS 120
            +SG+RKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA V RNPIVSAF+
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFA 120

Query: 121 PPLHLLPSPAATSSASW--VYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIG 180
           PP HLLPS   TSS+SW  VYMP+APPQFQVSHG VFT      PP PPPP    FFS G
Sbjct: 121 PPPHLLPSAVLTSSSSWPPVYMPQAPPQFQVSHGCVFT------PPPPPPP----FFSTG 180

Query: 181 SRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           SRSAHG+VDGPSLSRFS  E G G DDGPGLDLHLSLAP+AP
Sbjct: 181 SRSAHGIVDGPSLSRFSTVEDGPGFDDGPGLDLHLSLAPSAP 200

[Close]

BLAST of CmaCh04G020700 vs. ExPASy TrEMBL
Match: A0A0A0KRQ5 (Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucumis sativus OX=3659 GN=Gl-3 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 8.1e-75
Identity = 165/225 (73.33%), Postives = 182/225 (80.89%), Query Frame = 0


Query: 1   MAALD-HFQTKPNNNNP-TTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAA 60
           MAAL+ H+QTK NNNNP TTRLKLFGFDVQED + D   TP+ SSDS          GAA
Sbjct: 1   MAALENHYQTKQNNNNPATTRLKLFGFDVQEDLDQDDS-TPT-SSDS----------GAA 60

Query: 61  AAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAF 120
             +SG+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV RNPIV+AF
Sbjct: 61  VPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAF 120

Query: 121 SPPLHLLPSPAATSSASW-VYMPRAPPQFQVSHGSVFTP--AYVEAPPQPPPPSAAAFFS 180
           +PP HLLPS A T+S+SW VY+PRAPPQFQVSHG VFTP  +Y      PPPPS   FF+
Sbjct: 121 APPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFT 180

Query: 181 IGSRSAHGMVDGP-SLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           +GSRS+HGMVD P SLSRFSK +GG+  DDGPGLDLHLSLAPAAP
Sbjct: 181 MGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 213

[Close]

BLAST of CmaCh04G020700 vs. ExPASy TrEMBL
Match: A0A6J1JUL8 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.0e-74
Identity = 162/221 (73.30%), Postives = 173/221 (78.28%), Query Frame = 0


Query: 1   MAAL-DHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAA 60
           MAAL +H+Q+K  NNNPTTRLKLFGFDVQED EDDS  TPS SSDSG           AA
Sbjct: 1   MAALEEHYQSK-QNNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSG-----------AA 60

Query: 61  AASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFS 120
            +SG+RKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA V RNPIVSAF+
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFA 120

Query: 121 PPLHLLPSPAATSSASW--VYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIG 180
           PP HLLPS   TSS+SW  VYMP+ PPQFQVSHG VFT      PP PPPP    FFS G
Sbjct: 121 PPPHLLPSAVLTSSSSWPPVYMPQLPPQFQVSHGCVFT------PPPPPPP----FFSTG 180

Query: 181 SRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAA 219
           SRS HG+VDGPSLSRFS  E G G DDGPGLDLHLSLAP++
Sbjct: 181 SRSPHGIVDGPSLSRFSTVEDGPGFDDGPGLDLHLSLAPSS 199

[Close]

BLAST of CmaCh04G020700 vs. NCBI nr
Match: XP_022971807.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 424.9 bits (1091), Expect = 4.3e-115
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAA 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAA
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAA 60

Query: 61  ASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSP 120
           ASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSP
Sbjct: 61  ASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSP 120

Query: 121 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRS 180
           PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRS
Sbjct: 121 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRS 180

Query: 181 AHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           AHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP
Sbjct: 181 AHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 219

[Close]

BLAST of CmaCh04G020700 vs. NCBI nr
Match: XP_023551731.1 (zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 217/223 (97.31%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV----GGGGGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV    GGGGGG
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  AAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120
            AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS
Sbjct: 61  GAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120

Query: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180
           AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI
Sbjct: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180

Query: 181 GSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           GSRSAHGMVDGPSLSRFSKAEGGSG DDGPGLDLHLSLAPAAP
Sbjct: 181 GSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223

[Close]

BLAST of CmaCh04G020700 vs. NCBI nr
Match: XP_022962365.1 (zinc finger protein GIS3-like [Cucurbita moschata] >KAG6601815.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414.8 bits (1065), Expect = 4.5e-112
Identity = 217/226 (96.02%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV-------GGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV       GGG
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  GGGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120
           GGG AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP
Sbjct: 61  GGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120

Query: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180
           IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF
Sbjct: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180

Query: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           FSIGSRSAHGMVDGPSLSRFSKAEGGSG DDGPGLDLHLSLAPAAP
Sbjct: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 226

[Close]

BLAST of CmaCh04G020700 vs. NCBI nr
Match: KAG7016810.1 (Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.1 bits (1063), Expect = 7.6e-112
Identity = 217/228 (95.18%), Postives = 217/228 (95.18%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV---------G 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGV         G
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  GGGGGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLR 120
           GGGGG AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLR
Sbjct: 61  GGGGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLR 120

Query: 121 NPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAA 180
           NPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAA
Sbjct: 121 NPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAA 180

Query: 181 AFFSIGSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           AFFSIGSRSAHGMVDGPSLSRFSKAEGGSG DDGPGLDLHLSLAPAAP
Sbjct: 181 AFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 228

[Close]

BLAST of CmaCh04G020700 vs. NCBI nr
Match: XP_038875418.1 (zinc finger protein GIS3-like [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 8.0e-77
Identity = 172/227 (75.77%), Postives = 185/227 (81.50%), Query Frame = 0


Query: 1   MAALD-HFQTKP--NNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGA 60
           MAAL+ H+Q+K   NNNNP TRLKLFGFDVQED EDDS  TPS SSDSGGG        A
Sbjct: 1   MAALENHYQSKQNNNNNNPATRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLT--PASAA 60

Query: 61  AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSA 120
           A  +SG+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV RNPIVSA
Sbjct: 61  APPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSA 120

Query: 121 FSPPLHLLPSPAA--TSSASW-VYMPRAPPQFQVSHGSVFT-PAYVEAPPQPPPPSAAAF 180
           F+PP HLLPS AA  TSS+SW VY+PR PPQFQVSHG VFT  +Y +APP PPPP     
Sbjct: 121 FAPPPHLLPSAAASVTSSSSWPVYIPRVPPQFQVSHGCVFTHSSYADAPPPPPPPD---- 180

Query: 181 FSIGSRSAHGMVDGP-SLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 220
           F +GSRS HGMVD P SLSRFSK +GG+G DDGPGLDLHLSLAPAAP
Sbjct: 181 FFMGSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 221

[Close]

BLAST of CmaCh04G020700 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 5.8e-41
Identity = 124/243 (51.03%), Postives = 142/243 (58.44%), Query Frame = 0


Query: 12  NNNNPTTRLKLFGFDV--QEDFEDDS------------GRTPSGSSDSGGGGV---GGGG 71
           ++   T+RLKLFGF V  +EDF D S            G  P+GSS   GGGV   GGGG
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 72  GGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV----- 131
           GG      GERKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA      
Sbjct: 67  GG------GERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNA 126

Query: 132 ------LRNPIVSAFSPPLHLLPSPAATS--SASWVYMPR-APPQFQVSHGSVFTP---- 191
                 LRNPIVSAF+PP HLL S A        W+Y+PR +P Q  VSHG V       
Sbjct: 127 GSASQFLRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSGG 186

Query: 192 AYVEAPPQPPPPSAAAFFSIGSRSAHGMVDG--PSLSRFSKAEGGSGIDDGPGLDLHLSL 218
           A             + F  +G++  H    G  PS++ FS+ E G+  DDG GLDLHLSL
Sbjct: 187 AGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSL 242

[Close]

BLAST of CmaCh04G020700 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 94.7 bits (234), Expect = 9.6e-20
Identity = 88/225 (39.11%), Postives = 106/225 (47.11%), Query Frame = 0


Query: 17  TTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAAASGERKYECQYCYREF 76
           T+ LKLFG ++ E        T S  + S     G G G      S  RKYECQYC REF
Sbjct: 5   TSSLKLFGINLLE--------TTSVQNQSSEPRPGSGSG------SESRKYECQYCCREF 64

Query: 77  ANSQALGGHQNAHKKERQQLKRAQLQASR------NAAVLRNPIVSAFSPPLHLLPSP-- 136
           ANSQALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAF+P  HLL  P  
Sbjct: 65  ANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHP 124

Query: 137 -------AATSSASWVYMPRAPPQFQVS--HGSVFTPAYVEAPPQPPPPSAAAFFSIGSR 196
                   ++SS+ W+Y      Q  V   HG                      +  G  
Sbjct: 125 PPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHG------------------GRGLYGGGME 184

Query: 197 SAHGMVDG-----PSLSRF---SKAEGGSGIDDGPGLDLHLSLAP 217
           S  G V       P + RF   S    G  +++G GLDLHLSL P
Sbjct: 185 SMAGEVKTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of CmaCh04G020700 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 20  LKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAAASGERKYECQYCYREFANS 79
           +KLFGF++          T    S S              + +  +++ECQYC +EFANS
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTN----------TTSLTVMKRHECQYCGKEFANS 82

Query: 80  QALGGHQNAHKKERQQLKRAQLQASR 106
           QALGGHQNAHKKER + KR QLQA R
Sbjct: 83  QALGGHQNAHKKERLKKKRLQLQARR 98

[Close]

BLAST of CmaCh04G020700 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-08
Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 12  NNNNPTTR-LKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGAAAAASGERKYECQ 71
           N+ +P  R ++LFGF+     E+   +     ++            +    + E++++C 
Sbjct: 10  NSFSPKERPIRLFGFEFGASHEESESKDNYNENNE-----------SIKDDNKEKRFKCH 69

Query: 72  YCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNA 108
           YC+R F  SQALGGHQNAHK+ERQQ KR  L ++  A
Sbjct: 70  YCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNAAA 95

[Close]

BLAST of CmaCh04G020700 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 62  SGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP-IVSAFSP 121
           +  R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  + +  +     +P  +  F  
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLN 149

Query: 122 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVE----APPQPPPPS 170
             H    P+ T+ A   Y            G   TP+Y      APP   PP+
Sbjct: 150 NHHHRHYPSWTTEARSYY----------GGGGHQTPSYYSRNTLAPPSSNPPT 192

The following BLAST results are available for this feature:

BLAST of CmaCh04G020700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9H1	8.1e-40	51.03	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	1.3e-18	39.11	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39264	2.2e-08	45.35	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	6.9e-07	35.05	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
P93751	3.4e-06	35.40	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]

BLAST of CmaCh04G020700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2Z4	2.1e-115	100.00	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111470485 PE=4 S...	[more]
A0A6J1HEU6	2.2e-112	96.02	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111462831 PE=4...	[more]
A0A6J1FFV2	9.5e-76	74.32	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4...	[more]
A0A0A0KRQ5	8.1e-75	73.33	Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucu...	[more]
A0A6J1JUL8	4.0e-74	73.30	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 S...	[more]

BLAST of CmaCh04G020700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971807.1	4.3e-115	100.00	zinc finger protein GIS3-like [Cucurbita maxima]	[more]
XP_023551731.1	2.0e-112	97.31	zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962365.1	4.5e-112	96.02	zinc finger protein GIS3-like [Cucurbita moschata] >KAG6601815.1 Zinc finger pro...	[more]
KAG7016810.1	7.6e-112	95.18	Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038875418.1	8.0e-77	75.77	zinc finger protein GIS3-like [Benincasa hispida]	[more]

BLAST of CmaCh04G020700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68360.1	5.8e-41	51.03	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	9.6e-20	39.11	zinc finger protein 6	[more]
AT1G10480.1	1.5e-09	45.35	zinc finger protein 5	[more]
AT5G06650.1	4.9e-08	35.05	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G41940.1	2.4e-07	35.40	zinc finger protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 67..92 e-value: 1.4E-5 score: 25.0
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 57..113 e-value: 6.0E-9 score: 37.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..21
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 12..219
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 12..219
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 69..89
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 67..94 score: 11.676262
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 63..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020700.1	CmaCh04G020700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding