CmaCh04G020670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Copper-binding periplasmic protein
Location	Cma_Chr04: 13909244 .. 13910071 (+)
RNA-Seq Expression	CmaCh04G020670
Synteny	CmaCh04G020670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTGAAGTTTGCTCTGAGATTTCCAGTGTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTGAGTCTTCTGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTCTGCAAGATCTCTCCTCTGCGGATGAGCTCTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTTCTAAACCTAACCAATCTACTCCTCCAATTCCTCCCGATCCTCCGAGAAGTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCCAAGAGTAGAGGTTTGATAAGATCCTTACATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTCGAAACAGCAATCGCAATCGCAATCGCAATCGCAATCGCAATCGAAGGATTCTCGGACGCCGAGTTTGCAGAAACAGCCTTCGATTTCGAGTAGAAAATCGTCGGTATCTTCTTGCTCGAACTCGTATTTCGCAAATTCGTGCTCTCAGAAGCCTTCGACGAGGAGGAATTTCGGGGCGAACAATGGGAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

mRNA sequence

ATGGCGATTGAAGTTTGCTCTGAGATTTCCAGTGTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTGAGTCTTCTGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTCTGCAAGATCTCTCCTCTGCGGATGAGCTCTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTTCTAAACCTAACCAATCTACTCCTCCAATTCCTCCCGATCCTCCGAGAAGTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCCAAGAGTAGAGGTTTGATAAGATCCTTACATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTCGAAACAGCAATCGCAATCGCAATCGCAATCGCAATCGCAATCGAAGGATTCTCGGACGCCGAGTTTGCAGAAACAGCCTTCGATTTCGAGTAGAAAATCGTCGGTATCTTCTTGCTCGAACTCGTATTTCGCAAATTCGTGCTCTCAGAAGCCTTCGACGAGGAGGAATTTCGGGGCGAACAATGGGAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

Coding sequence (CDS)

ATGGCGATTGAAGTTTGCTCTGAGATTTCCAGTGTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTGAGTCTTCTGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTCTGCAAGATCTCTCCTCTGCGGATGAGCTCTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTTCTAAACCTAACCAATCTACTCCTCCAATTCCTCCCGATCCTCCGAGAAGTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCCAAGAGTAGAGGTTTGATAAGATCCTTACATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTCGAAACAGCAATCGCAATCGCAATCGCAATCGCAATCGCAATCGAAGGATTCTCGGACGCCGAGTTTGCAGAAACAGCCTTCGATTTCGAGTAGAAAATCGTCGGTATCTTCTTGCTCGAACTCGTATTTCGCAAATTCGTGCTCTCAGAAGCCTTCGACGAGGAGGAATTTCGGGGCGAACAATGGGAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

Protein sequence

MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQDLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQSQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK

Homology

[Close]

BLAST of CmaCh04G020670 vs. ExPASy TrEMBL
Match: A0A6J1I4A0 (uncharacterized protein LOC111470497 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470497 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.6e-141
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120
           DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS 180
           ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS
Sbjct: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS 180

Query: 181 QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240
           QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM
Sbjct: 181 QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240

Query: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 275

[Close]

BLAST of CmaCh04G020670 vs. ExPASy TrEMBL
Match: A0A6J1H5M5 (uncharacterized protein LOC111460336 OS=Cucurbita moschata OX=3662 GN=LOC111460336 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.0e-135
Identity = 268/277 (96.75%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLES--DFDFCIGNLL 60
           MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLES  DFDFCIGNLL
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFDFCIGNLL 60

Query: 61  LQDLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKEL 120
           LQDLSSADELFCNGKILPVEIKKS+EPNREVSKPN+STPPIPPDPP SSVSSEKKSLKEL
Sbjct: 61  LQDLSSADELFCNGKILPVEIKKSVEPNREVSKPNESTPPIPPDPPTSSVSSEKKSLKEL 120

Query: 121 LSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQS 180
           LSASFDAEEKP SKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSK QSQS
Sbjct: 121 LSASFDAEEKPHSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKHQSQS 180

Query: 181 QSQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVR 240
           QSQSQSQSKDSRTP+LQKQPSISSRKSSVSSCSNSYFANS SQKPSTRRNFGANNGNGVR
Sbjct: 181 QSQSQSQSKDSRTPNLQKQPSISSRKSSVSSCSNSYFANSFSQKPSTRRNFGANNGNGVR 240

Query: 241 IMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           IMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 IMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 277

[Close]

BLAST of CmaCh04G020670 vs. ExPASy TrEMBL
Match: A0A6J1I9N3 (uncharacterized protein LOC111470497 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470497 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.5e-128
Identity = 253/275 (92.00%), Postives = 253/275 (92.00%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120
           DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS 180
           ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALN         
Sbjct: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALN--------- 180

Query: 181 QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240
                        LQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM
Sbjct: 181 -------------LQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240

Query: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 253

[Close]

BLAST of CmaCh04G020670 vs. ExPASy TrEMBL
Match: A0A6J1FKX8 (uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC111445167 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.4e-108
Identity = 230/280 (82.14%), Postives = 243/280 (86.79%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEVCSEIS+VGISPRISFSHDLNQAD LPSSSDCNR RLDL+LLESDFDFCIGNLL Q
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQS--TPPIPPDPPRSSVSSEKKSLKEL 120
           DLSSADELF NGKILPVEIKKSIEPNREV KP QS   PP+PPDP R+SVSSEKKSLKEL
Sbjct: 61  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPPPPPVPPDPARNSVSSEKKSLKEL 120

Query: 121 LSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQS 180
           LSASFDA+EKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSALN K     
Sbjct: 121 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPK----- 180

Query: 181 QSQSQSQSKDSRTPSLQKQPSISSRK---SSVSSCSNSYFANSCSQKPSTRRNFGANNGN 240
              SQS SKD + P+LQKQPSISS +   +S+S+ +NSYFAN  SQKPS R+N G NNGN
Sbjct: 181 ---SQSTSKDPQRPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGN 240

Query: 241 GVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           GVRI SP LNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 241 GVRI-SPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 271

[Close]

BLAST of CmaCh04G020670 vs. ExPASy TrEMBL
Match: A0A6J1DFL1 (uncharacterized protein LOC111020041 OS=Momordica charantia OX=3673 GN=LOC111020041 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.6e-102
Identity = 219/276 (79.35%), Postives = 237/276 (85.87%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEVCSEISSVGISPRISFSHDLNQ D LP SSD +R RLDL+LLESDFDFCIGNLL+Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQTDLLP-SSDGSRDRLDLTLLESDFDFCIGNLLIQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNRE-VSKPNQSTPPIPPDPPRSSVSSEKKSLKELL 120
           DLSSADELF NG+I PV+IKKS++ N + V KPN+S P  PP+P R+S+SSEKKSLKELL
Sbjct: 61  DLSSADELFSNGRIRPVQIKKSLDANTQLVHKPNESAPIAPPEPSRNSISSEKKSLKELL 120

Query: 121 SASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQ 180
           SASFDA+EKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGS+LN KQQ  S+
Sbjct: 121 SASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSSLNPKQQPNSK 180

Query: 181 SQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRI 240
             S      S+ P+LQKQPSISSRKSS SS  NSYF NS SQK STR+NFG NNGN VRI
Sbjct: 181 DSS------SQRPNLQKQPSISSRKSSASSFPNSYFTNSSSQKSSTRKNFGPNNGNAVRI 240

Query: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
            SPLLNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 241 -SPLLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 268

[Close]

BLAST of CmaCh04G020670 vs. NCBI nr
Match: XP_022971826.1 (uncharacterized protein LOC111470497 isoform X1 [Cucurbita maxima])

HSP 1 Score: 510.8 bits (1314), Expect = 7.5e-141
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120
           DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS 180
           ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS
Sbjct: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS 180

Query: 181 QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240
           QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM
Sbjct: 181 QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240

Query: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 275

[Close]

BLAST of CmaCh04G020670 vs. NCBI nr
Match: XP_022959333.1 (uncharacterized protein LOC111460336 [Cucurbita moschata] >KAG7032519.1 hypothetical protein SDJN02_06568, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135
Identity = 268/277 (96.75%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLES--DFDFCIGNLL 60
           MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLES  DFDFCIGNLL
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFDFCIGNLL 60

Query: 61  LQDLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKEL 120
           LQDLSSADELFCNGKILPVEIKKS+EPNREVSKPN+STPPIPPDPP SSVSSEKKSLKEL
Sbjct: 61  LQDLSSADELFCNGKILPVEIKKSVEPNREVSKPNESTPPIPPDPPTSSVSSEKKSLKEL 120

Query: 121 LSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQS 180
           LSASFDAEEKP SKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSK QSQS
Sbjct: 121 LSASFDAEEKPHSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKHQSQS 180

Query: 181 QSQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVR 240
           QSQSQSQSKDSRTP+LQKQPSISSRKSSVSSCSNSYFANS SQKPSTRRNFGANNGNGVR
Sbjct: 181 QSQSQSQSKDSRTPNLQKQPSISSRKSSVSSCSNSYFANSFSQKPSTRRNFGANNGNGVR 240

Query: 241 IMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           IMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 IMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 277

[Close]

BLAST of CmaCh04G020670 vs. NCBI nr
Match: KAG6601812.1 (hypothetical protein SDJN03_07045, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 261/275 (94.91%), Postives = 264/275 (96.00%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEV SEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ
Sbjct: 1   MAIEVSSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120
           DLSSADELFCNGKILPVEIKKS+EPNREVSKPN+STPPIPPDPP SSVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSVEPNREVSKPNESTPPIPPDPPTSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS 180
           ASFDAEEKP SKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSK       
Sbjct: 121 ASFDAEEKPHSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKH------ 180

Query: 181 QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240
           QSQSQSKDSRTP+LQKQPSISSRKSSVSSCSNSYFANS SQKPSTRRNFGANNGNGVRIM
Sbjct: 181 QSQSQSKDSRTPNLQKQPSISSRKSSVSSCSNSYFANSFSQKPSTRRNFGANNGNGVRIM 240

Query: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 269

[Close]

BLAST of CmaCh04G020670 vs. NCBI nr
Match: XP_022971829.1 (uncharacterized protein LOC111470497 isoform X2 [Cucurbita maxima])

HSP 1 Score: 467.6 bits (1202), Expect = 7.3e-128
Identity = 253/275 (92.00%), Postives = 253/275 (92.00%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120
           DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQS 180
           ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALN         
Sbjct: 121 ASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALN--------- 180

Query: 181 QSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240
                        LQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM
Sbjct: 181 -------------LQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIM 240

Query: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 253

[Close]

BLAST of CmaCh04G020670 vs. NCBI nr
Match: XP_023521240.1 (uncharacterized protein LOC111784934 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.5 bits (1046), Expect = 9.0e-110
Identity = 229/276 (82.97%), Postives = 238/276 (86.23%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60
           MAIEVCSEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDFCIGNLL+Q
Sbjct: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60

Query: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120
           DLSSAD+LFCNGKILPVEIKKSI     VSKPN+STPPI    P +SVSSEKKSLKELLS
Sbjct: 61  DLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPI----PTTSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSK-SFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQ 180
           ASFDAEEKPQSK SFWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALN        
Sbjct: 121 ASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN-------- 180

Query: 181 SQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRI 240
                         LQKQPSISS KSSVSSCSNSYFANSCSQK STR NFGAN+GNGVRI
Sbjct: 181 --------------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRI 240

Query: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245

[Close]

BLAST of CmaCh04G020670 vs. TAIR 10
Match: AT1G68330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 7.2e-33
Identity = 132/295 (44.75%), Postives = 167/295 (56.61%), Query Frame = 0


Query: 1   MAIEV-CSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLE--SDFDFCIG-N 60
           MAI+V CSE S  GISPRISFS+DL+       S+D    RLD +LL+  S+FDFC G +
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLD-------STDDGEVRLDSTLLDSGSEFDFCFGSS 60

Query: 61  LLLQDLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSS------ 120
             +Q++S ADELF  GKILPV+IKK      E S P   T  +P     SS SS      
Sbjct: 61  CSVQEVSPADELFSEGKILPVQIKK------EESLPQTVTFRVPRSASLSSSSSSSSSSS 120

Query: 121 -------EKKSLKE-LLSASFDAEEKPQSKSFWQFKRSSSLNCESSK-SRGLIRSLHFLS 180
                  +K  LKE LL+   D E+KP+   F QFKRS SLN + S+ S+GLIRS HFLS
Sbjct: 121 SSSRAPEKKMRLKELLLNPESDFEDKPRG-LFLQFKRSISLNYDKSRNSKGLIRSFHFLS 180

Query: 181 RSNSTGSALNSKQQSQSQSQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQ 240
           RSNST +        ++    ++ +     P L+       R SS+SS S  ++    S+
Sbjct: 181 RSNSTPNPNLDLLPKETHHPHKTHNLPKHKPPLR-------RSSSLSSSSVPFY----SK 240

Query: 241 KPSTRRNFGANNGNGVRIMSPLLNLPPP-YISKVTVSFFGFGSLFCNGKNKKKNK 276
           KP  R +FG  NG GVR+ SP+LN PPP +IS V   FF  GSL CNGK   K K
Sbjct: 241 KPLGRNSFGNGNG-GVRV-SPVLNFPPPAFISNVADGFFSIGSL-CNGKTNTKTK 267

[Close]

BLAST of CmaCh04G020670 vs. TAIR 10
Match: AT1G67050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-29
Identity = 111/288 (38.54%), Postives = 158/288 (54.86%), Query Frame = 0


Query: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLP------SSSDCNRGRLDLSLLESDFDFCI 60
           MA+++ SE S+  +SPRISFS D  Q+D++P       SS+     L+ S+   DFDFCI
Sbjct: 1   MAVDLLSENSN--MSPRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSI---DFDFCI 60

Query: 61  ------GNLLLQDLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSV 120
                 G    Q   SADELF NGKILP EIKK  EP ++  +P     P+   P     
Sbjct: 61  PGGVNSGESFDQGSWSADELFSNGKILPTEIKKKPEPGKKEPEPK----PVKSKPDSRKQ 120

Query: 121 SSEKKSLKELLSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGS 180
             +    ++        EEK  +KSFW FKRSSSLNC S+  R L   L  L+RSNSTGS
Sbjct: 121 RKQPNEEQQEDDVIITTEEKTNTKSFWGFKRSSSLNCGSTYGRSLC-PLPLLNRSNSTGS 180

Query: 181 ALNSKQQSQSQSQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRN 240
             + ++QS S+       K +    LQ+  S+SS  S+ SS SN+ F+    +K     +
Sbjct: 181 TSSKQKQSSSR-------KHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYS 240

Query: 241 FGANNGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFC-NGKNKKKNK 276
           +G++ G G+R+ SP++N+ P      + + FGFGS+F  NG++K K +
Sbjct: 241 YGSHGGGGIRV-SPVINVVP------SGNLFGFGSMFSGNGRDKNKKR 264

[Close]

BLAST of CmaCh04G020670 vs. TAIR 10
Match: AT1G48780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 6.2e-16
Identity = 100/271 (36.90%), Postives = 127/271 (46.86%), Query Frame = 0


Query: 17  RISFSHDLNQADSLPSSSDCNRG--RLDLSLLE---SDFDFCIGNLL-LQDLSSADELFC 76
           RISFS DL Q+D  P       G  R D +LL+   SDF+F I N     D S ADE+F 
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFA 68

Query: 77  NGKILPVEI-KKSIEPNR----EVSKPNQSTPPIPPDP-PRSSVSSEKKSLKELLSASFD 136
           +G ILP  +   S  P R    E+     S  P P  P P  +  SEK++      A+ D
Sbjct: 69  DGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSPQPLPTKHSEKETNGRASGANSD 128

Query: 137 AEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQSQSQS 196
           +E +  SKSFW FKRSSSLNC+  KS  LI S   L+RSNSTGS  NSK         ++
Sbjct: 129 SEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVTNSK---------RA 188

Query: 197 QSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIMSPLL 256
             +D            + R SS SSC N+Y      Q    +       G G   + P+L
Sbjct: 189 MLRDVN----------NHRPSSRSSCCNAY------QFRPQKHTGKKGEGGGSFSVIPVL 243

Query: 257 NLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 276
           N P         S FG GS+  +  +K K K
Sbjct: 249 NGP---------STFGLGSILRHSNSKDKTK 243

[Close]

BLAST of CmaCh04G020670 vs. TAIR 10
Match: AT3G18300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11
Identity = 99/282 (35.11%), Postives = 125/282 (44.33%), Query Frame = 0


Query: 17  RISFSHDLNQADSLPSSSDCNRG--RLDLSLLE---SDFDFCI-GNLLLQDLSSADELFC 76
           R SF+ DL Q+D          G  R D +LL+   SDF+F I  N    D S ADE+F 
Sbjct: 10  RFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDSSPADEIFA 69

Query: 77  NGKILPV----EIKKSIEPNR--------EVSKPNQST--PPIP-PDPPRSSVSSEKKSL 136
           +G ILPV        S  P R         VS P  S+  PP+P P P  S   S K++ 
Sbjct: 70  DGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEHSRKYSVKETR 129

Query: 137 KEL----LSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALN 196
             L      A+ D+E +  SKSFW FKRSSSLNC+  KS  LI S   L+RSNSTGS   
Sbjct: 130 GSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVAI 189

Query: 197 SKQQSQSQSQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGA 256
           SK++        S  +    P     PS   R  S   CS+  F      +P        
Sbjct: 190 SKREMLRDINKHSSQRHG-VPRPGVNPSSHMRPPSSFCCSSYQF------RPQKHAGKNG 249

Query: 257 NNGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKK 274
               G   ++P++  P P         FG GS+    K KKK
Sbjct: 250 GGRGGSFWIAPVIGGPSP---------FGLGSILRLTKEKKK 273

The following BLAST results are available for this feature:

BLAST of CmaCh04G020670 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G020670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4A0	3.6e-141	100.00	uncharacterized protein LOC111470497 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H5M5	1.0e-135	96.75	uncharacterized protein LOC111460336 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1I9N3	3.5e-128	92.00	uncharacterized protein LOC111470497 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FKX8	2.4e-108	82.14	uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1DFL1	2.6e-102	79.35	uncharacterized protein LOC111020041 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of CmaCh04G020670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971826.1	7.5e-141	100.00	uncharacterized protein LOC111470497 isoform X1 [Cucurbita maxima]	[more]
XP_022959333.1	2.1e-135	96.75	uncharacterized protein LOC111460336 [Cucurbita moschata] >KAG7032519.1 hypothet...	[more]
KAG6601812.1	1.4e-131	94.91	hypothetical protein SDJN03_07045, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022971829.1	7.3e-128	92.00	uncharacterized protein LOC111470497 isoform X2 [Cucurbita maxima]	[more]
XP_023521240.1	9.0e-110	82.97	uncharacterized protein LOC111784934 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G020670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68330.1	7.2e-33	44.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G67050.1	2.2e-29	38.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G48780.1	6.2e-16	36.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G18300.1	2.7e-11	35.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..209
None	No IPR available	PANTHER	PTHR31722:SF33	COPPER-BINDING PERIPLASMIC PROTEIN	coord: 1..274
None	No IPR available	PANTHER	PTHR31722	OS06G0675200 PROTEIN	coord: 1..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020670.1	CmaCh04G020670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0016985	mannan endo-1,4-beta-mannosidase activity