CmaCh04G020650 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger CCCH domain-containing protein 1
Location	Cma_Chr04: 13854023 .. 13857177 (+)
RNA-Seq Expression	CmaCh04G020650
Synteny	CmaCh04G020650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGACTTAACGCACAAGAACTTCAAATCGCTTAACCTAAGAGCTTTGATCGATATCCCTTTGCGACTCATTCACAAATTCAAGGGCTTTACAATTGGGACAAAGACGGAAACCTAAAAACCCTAATTTCCTTCTTTTTAATTCGGCGACACCAGCCCTCCCGACCTTCTCTCTGCCGGAGCACCGAACCAGGTCCGCGGCGACGTTCTCACCTTTGGCAGTAAACTCCGACTCCTGACGGACATCCAGCACACGCCAGATCCGGCGGCGTGGGCGGCGTTGATAGACCCTCGAACGACCAGCTGCGAACAGGGAGTCCCACAGCAGCGGGACCTCTCAATCTGCGACGGTGAGCCTAAATCTGACAGCCGCGGCTCCTACCCACAAACCTTACAAACCCTCCACGCCTATTTCGATCATTGGTTTGTTTGAGAGAGAGTTTATTCAATTCGTTCTTTCTTGTTTTCAATTGAGGAATCTGTTTTAAATCCTGCTGGTCTTACTCGTACACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGGTATTAGCTATTTTTTCTATATCCAAATATTTTAACGTGTATATAAGTTTTCGCATTTTCATCAAGAGATTTTTTTTTTTTAATGTTTATGATTTTTCTGAAATTAGTCACTCTCCATACGTTTTTAATCCTTTGATCTTCAGTCTGTAGCTTCTTCAAAAAACCCACAAAGAACAAAAACATTAGAAAGCGGACGGTTGATGAAGATGAAGAGGACTCTAAAAGTACTGAGACTTCGGTGCTGCAAAATCAGAAAAAAGCCCCCAAGACAGATAGCAAACTTTATTTTTCTTCTGGGCCTTCTAAAAGTAACTTGACTAATGAGTCAAATGTGGAATCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGATAGCAGAGCCACTGCAACATTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTAAAGGGCAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCGTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCTCATGGGCCTCTTAGAGCTTCTGCTCATATAAGAGCTTCCGCGAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGAGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTGGAAAAGGCAAGGAAGAGAAAACTAGCCATGAGATCTGATGATGGGGATGAGGATGTTGCAGAACAGAGTGATGAAGATGAGGAAGATGCCTTGCCCTTTGCTTGTTTTATTTGTCGTGAGCCATTTGTGGATCCTGTAGTGACCAAATGCAAACATTACTTCTGTGAGCATTGTGCACTAAAGGTAATAGCTCTTTTCTGCTCTTAATTATGTCTTAATTATCTCGCATCGTCAATATGTTTATCTTTGAAGTCCTTTCTTCTCTGGGAGGTTTAAATTTGTTTCTAAATTCAGTCTTGACTCTTGTTCCTTTTATTTTGATGCTTTTTATTTTGATGGCTGAAGCATTAGGATAATAAGCACGTATGTCAATTGATTTAATGACTTTGCATGCCTAGAGTTCATATCCTCAACTGCAGAAGTTCTGTATATTCTTGATTTGTTTTTCAAGAGAACACTTTTAGATGACCATTTCATCCTACGTCATTACGTATTTGATTTCTTTGAAATGAATCTTAAATCATGTTATTTTTTTCTTATTATAAAAATTTGCAGCGCCATGCAAAGAATAAGAAATGCTTCGTTTGCAATCAGCCTACACTTGGAATCTTTAACACGGCTCATGAGATAAAGAAGAAGATGGCAGAGAGTAAGTAAGTTTTTTTTTCCTTGACCTGCATTGGCCCCTTGTCACGGTTTTCTTTGAATTTGTAGCAAAATTATCTTTCTCTTGCTTATTTTTTATGAGAAAGTTCAGTTTTCAATATCTACTTGATGAAGCTTAAATTCATGCCCTGCTACAATATGAGCTTGGAGAATCTTGGATAACATTTCTTGAAATGTGGGAATATGTCAGTGTAGAAGTAGTTTGGATGAATTTATTTCTGAATTTCATCCTCTGTAATGGATTATCTTTCTGTAAATATCCCTGAAGCCCCTCAATCTACTTGGGTTCCTCCAGTTTGAAACTGAAAACCACCACTCTGACTTTATAACATTTTCCCCCTTTAGAAGTTCATGAAATAGATAGATGGTCAGAAGTGGTTTTTAACTAGGACCTTTTGTTGAACTCATAAGTGGTTCTAATTATTCAGTCTTACTTCTGGATGGTATCAAGTTATACCTTACATAACGCTTAGGGATGTGAATATCTAAATTGACTTAGATATTGATTCCAGTCTTTCCACTTGTTTTGGCATTTGGACGTAAACTTATTTGTTTGATTAAATGGTGTGAATATCAGGGATTTTTAGGTGTTAATATATACAACATTTTAGAAACAATAAAACTGTAGATAAATTAGAAATGTAAGGTTGAGTGCTGGTCTTTCACTGTTTTACCTTAGGCGCAGATGAATTAAGCAGTAGCCTGTTGCATTAGGTACACCTTTATTAAGCATCTTGAGAATGTGATGACTGTTGTGGAAAGTAAAGTAGTTATGGATGGAGCTCGTTATGGTTGAAGTTATGTCTCATCTTACCGTCTGAGATTCAAGGGATAGGGACAGTTTTTGTCAACTCACATTGGGTTGGATAGAGAACTTGAAAGATAGGGATTGAGATTGTGATTGTGATTCTACTTGGATCAAATGAGTATATTCATGGGTTCTAATATTCTTTTTTTATCTAGTATTTTTCTTTATAGATTTTAGTGGTTAAGTTGTACTGTTAATATTATGTTATGTGGATCACTAATTAGTGGTTCGATCTCATATCATTCAATTGTTTAGAGTTTTTGTACTCGAATTGTCTCCCCGAAACGAGTTGAATTCAACTCTTGTTTGGTTGGGCGCATTCTTCAAACTTTTTTTTTTAC

mRNA sequence

TTATGACTTAACGCACAAGAACTTCAAATCGCTTAACCTAAGAGCTTTGATCGATATCCCTTTGCGACTCATTCACAAATTCAAGGGCTTTACAATTGGGACAAAGACGGAAACCTAAAAACCCTAATTTCCTTCTTTTTAATTCGGCGACACCAGCCCTCCCGACCTTCTCTCTGCCGGAGCACCGAACCAGGTCCGCGGCGACGTTCTCACCTTTGGCAGTAAACTCCGACTCCTGACGGACATCCAGCACACGCCAGATCCGGCGGCGTGGGCGGCGTTGATAGACCCTCGAACGACCAGCTGCGAACAGGGAGTCCCACAGCAGCGGGACCTCTCAATCTGCGACGGTGAGCCTAAATCTGACAGCCGCGGCTCCTACCCACAAACCTTACAAACCCTCCACGCCTATTTCGATCATTGGTTTGTTTGAGAGAGAGTTTATTCAATTCGTTCTTTCTTGTTTTCAATTGAGGAATCTGTTTTAAATCCTGCTGGTCTTACTCGTACACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAAAAAACCCACAAAGAACAAAAACATTAGAAAGCGGACGGTTGATGAAGATGAAGAGGACTCTAAAAGTACTGAGACTTCGGTGCTGCAAAATCAGAAAAAAGCCCCCAAGACAGATAGCAAACTTTATTTTTCTTCTGGGCCTTCTAAAAGTAACTTGACTAATGAGTCAAATGTGGAATCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGATAGCAGAGCCACTGCAACATTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTAAAGGGCAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCGTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCTCATGGGCCTCTTAGAGCTTCTGCTCATATAAGAGCTTCCGCGAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGAGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTGGAAAAGGCAAGGAAGAGAAAACTAGCCATGAGATCTGATGATGGGGATGAGGATGTTGCAGAACAGAGTGATGAAGATGAGGAAGATGCCTTGCCCTTTGCTTGTTTTATTTGTCGTGAGCCATTTGTGGATCCTGTAGTGACCAAATGCAAACATTACTTCTGTGAGCATTGTGCACTAAAGCGCCATGCAAAGAATAAGAAATGCTTCGTTTGCAATCAGCCTACACTTGGAATCTTTAACACGGCTCATGAGATAAAGAAGAAGATGGCAGAGAGTAAGTAAGTTTTTTTTTCCTTGACCTGCATTGGCCCCTTGTCACGGTTTTCTTTGAATTTGTAGCAAAATTATCTTTCTCTTGCTTATTTTTTATGAGAAAGTTCAGTTTTCAATATCTACTTGATGAAGCTTAAATTCATGCCCTGCTACAATATGAGCTTGGAGAATCTTGGATAACATTTCTTGAAATGTGGGAATATGTCAGTGTAGAAGTAGTTTGGATGAATTTATTTCTGAATTTCATCCTCTGTAATGGATTATCTTTCTGTAAATATCCCTGAAGCCCCTCAATCTACTTGGGTTCCTCCAGTTTGAAACTGAAAACCACCACTCTGACTTTATAACATTTTCCCCCTTTAGAAGTTCATGAAATAGATAGATGGTCAGAAGTGGTTTTTAACTAGGACCTTTTGTTGAACTCATAAGTGGTTCTAATTATTCAGTCTTACTTCTGGATGGTATCAAGTTATACCTTACATAACGCTTAGGGATGTGAATATCTAAATTGACTTAGATATTGATTCCAGTCTTTCCACTTGTTTTGGCATTTGGACGTAAACTTATTTGTTTGATTAAATGGTGTGAATATCAGGGATTTTTAGGTGTTAATATATACAACATTTTAGAAACAATAAAACTGTAGATAAATTAGAAATGTAAGGTTGAGTGCTGGTCTTTCACTGTTTTACCTTAGGCGCAGATGAATTAAGCAGTAGCCTGTTGCATTAGGTACACCTTTATTAAGCATCTTGAGAATGTGATGACTGTTGTGGAAAGTAAAGTAGTTATGGATGGAGCTCGTTATGGTTGAAGTTATGTCTCATCTTACCGTCTGAGATTCAAGGGATAGGGACAGTTTTTGTCAACTCACATTGGGTTGGATAGAGAACTTGAAAGATAGGGATTGAGATTGTGATTGTGATTCTACTTGGATCAAATGAGTATATTCATGGGTTCTAATATTCTTTTTTTATCTAGTATTTTTCTTTATAGATTTTAGTGGTTAAGTTGTACTGTTAATATTATGTTATGTGGATCACTAATTAGTGGTTCGATCTCATATCATTCAATTGTTTAGAGTTTTTGTACTCGAATTGTCTCCCCGAAACGAGTTGAATTCAACTCTTGTTTGGTTGGGCGCATTCTTCAAACTTTTTTTTTTAC

Coding sequence (CDS)

ATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAAAAAACCCACAAAGAACAAAAACATTAGAAAGCGGACGGTTGATGAAGATGAAGAGGACTCTAAAAGTACTGAGACTTCGGTGCTGCAAAATCAGAAAAAAGCCCCCAAGACAGATAGCAAACTTTATTTTTCTTCTGGGCCTTCTAAAAGTAACTTGACTAATGAGTCAAATGTGGAATCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGATAGCAGAGCCACTGCAACATTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTAAAGGGCAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCGTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCTCATGGGCCTCTTAGAGCTTCTGCTCATATAAGAGCTTCCGCGAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGAGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTGGAAAAGGCAAGGAAGAGAAAACTAGCCATGAGATCTGATGATGGGGATGAGGATGTTGCAGAACAGAGTGATGAAGATGAGGAAGATGCCTTGCCCTTTGCTTGTTTTATTTGTCGTGAGCCATTTGTGGATCCTGTAGTGACCAAATGCAAACATTACTTCTGTGAGCATTGTGCACTAAAGCGCCATGCAAAGAATAAGAAATGCTTCGTTTGCAATCAGCCTACACTTGGAATCTTTAACACGGCTCATGAGATAAAGAAGAAGATGGCAGAGAGTAAGTAA

Protein sequence

MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLYFSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSDDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCNQPTLGIFNTAHEIKKKMAESK

Homology

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BLAST of CmaCh04G020650 vs. ExPASy Swiss-Prot
Match: Q8GX84 (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 473.8 bits (1218), Expect = 1.6e-132
Identity = 236/318 (74.21%), Postives = 270/318 (84.91%), Query Frame = 0


Query: 6   ENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKS-TETSVLQNQKKAPKTDSKLYFSSG 65
           +  Q +QVC+FFKKPTK+KNIRKRT+D DEED  S +E+S+LQN KK  K DSKLYFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 66  PSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQA 125
           PSKS+ T     E  + +F ++SSKEIQV +DS ATATLETETDF++DARAIRERVLK+A
Sbjct: 82  PSKSSTTTSGAPE--RSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 126 EEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARF 185
           +EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR SARF
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARF 201

Query: 186 DYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSDDGD 245
           DYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +D D
Sbjct: 202 DYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDED 261

Query: 246 EDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCNQPT 305
           ++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFCEHCALK H KNKKCFVCNQPT
Sbjct: 262 DEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT 321

Query: 306 LGIFNTAHEIKKKMAESK 323
           +GIFN AHEIKK+MAE +
Sbjct: 322 MGIFNAAHEIKKRMAEER 336

[Close]

BLAST of CmaCh04G020650 vs. ExPASy Swiss-Prot
Match: Q9FNG6 (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 1.7e-131
Identity = 232/321 (72.27%), Postives = 269/321 (83.80%), Query Frame = 0


Query: 3   DTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKS-TETSVLQNQKKAPKTDSKLYF 62
           D   NQ+ +QVC+FFKKPTK+KNIRKRT+D DEED  S +E+S+LQN KK  K DS LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS       ++   ++P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPS-----TRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALK H KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIKKKMAESK 323
           QPT+GIFN AHEIKK+MAE +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of CmaCh04G020650 vs. ExPASy Swiss-Prot
Match: Q6K4V3 (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 3.0e-115
Identity = 214/321 (66.67%), Postives = 247/321 (76.95%), Query Frame = 0


Query: 13  VCSFFKKPTKNKNIRKRTV-----DEDEEDSKSTETSVLQNQKKAPKTDSKLYFSSGPSK 72
           VCSF +KP   KNIRKR       D+D+ED      +     KKAP + SKL+FSS    
Sbjct: 18  VCSFVRKPP--KNIRKRPTAPAGSDDDDEDGSGAIAAA--RAKKAPSSTSKLFFSS---- 77

Query: 73  SNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEA 132
                 ++  S+   FQ+ESS+ IQ   DSRATATLETET+F RDARAIRER LKQAEE+
Sbjct: 78  ------ADGSSEPRRFQYESSRTIQASTDSRATATLETETEFDRDARAIRERQLKQAEES 137

Query: 133 LK------GKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 192
           LK           SG  ++YKG++ Y DYKAGFRREHT+SSEKAGG+HGPLRASAHIR S
Sbjct: 138 LKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHGPLRASAHIRLS 197

Query: 193 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSD 252
           ARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQ+EKEWEE EKARKR++AM  D
Sbjct: 198 ARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEKARKRRIAMGGD 257

Query: 253 DGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCN 312
             D +  E+ D+D+E+ALPFAC+ICREPFVDPVVTKCKHYFCEHCALK H+KNKKCFVCN
Sbjct: 258 GSDYEAGEEDDDDDEEALPFACYICREPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCN 317

Query: 313 QPTLGIFNTAHEIKKKMAESK 323
           +PTLGIFN A EI+KKMA+ K
Sbjct: 318 KPTLGIFNAAQEIRKKMAQDK 324

[Close]

BLAST of CmaCh04G020650 vs. ExPASy Swiss-Prot
Match: Q67ER4 (E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.4e-48
Identity = 128/330 (38.79%), Postives = 189/330 (57.27%), Query Frame = 0


Query: 11  EQVCSF-FKKPTKN--KNIRKRTV-DEDEEDSKSTE---TSVLQNQKKAPKTDSKLYFSS 70
           +QVC+F FKKP +      RKR + +++  DS S+     +V++ +KK    +  +  + 
Sbjct: 12  DQVCTFLFKKPGRKVAAGRRKRPICNQESGDSSSSSDEGNTVVRPEKKRAVHNPMIQKTR 71

Query: 71  GPSKSNLT---------NESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDAR 130
           G  K  +           E+  ES   +++   S +     D  ATA  E +T+  RDA+
Sbjct: 72  GSGKQKVAYGDLSSEEEEENKSESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+G+      +K+Y+G+N   +Y+   + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGQ----EDDKIYRGIN---NYQKFMKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGV 251

Query: 251 KRKLAMRSDDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHA 310
                      DE+    SDE+E   +PF CFICR+ F +PVVTKC+HYFCE CAL+   
Sbjct: 252 YE---------DENYEVGSDEEE---IPFKCFICRQTFQNPVVTKCRHYFCESCALQHFR 311

Query: 311 KNKKCFVCNQPTLGIFNTAHEIKKKMAESK 323
              +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of CmaCh04G020650 vs. ExPASy Swiss-Prot
Match: O15541 (E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.4e-48
Identity = 131/330 (39.70%), Postives = 185/330 (56.06%), Query Frame = 0


Query: 11  EQVCSF-FKKPTKN--KNIRKRTV---DEDEEDSKSTE-TSVLQNQKK---------APK 70
           +QVC+F FKKP +      RKR     +  E  S S E  +V++ +KK           +
Sbjct: 12  DQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKRVTHNPMIQKTR 71

Query: 71  TDSKLYFSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDAR 130
              K   + G   S    E+  ES   +++   S +     D  ATA  E +T+  RDA+
Sbjct: 72  DSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+GK      +K+Y+G+N Y  Y    + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGK----EDDKIYRGINNYQKY---MKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE----- 251

Query: 251 KRKLAMRSDDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHA 310
                 R    +++  E   +DEE  +PF CFICR+ F +PVVTKC+HYFCE CAL+   
Sbjct: 252 -----GRYGVYEDENYEVGSDDEE--IPFKCFICRQSFQNPVVTKCRHYFCESCALQHFR 311

Query: 311 KNKKCFVCNQPTLGIFNTAHEIKKKMAESK 323
              +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of CmaCh04G020650 vs. ExPASy TrEMBL
Match: A0A6J1I9H7 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111470453 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.2e-181
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC
Sbjct: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEIKKKMAESK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CmaCh04G020650 vs. ExPASy TrEMBL
Match: A0A6J1H4B5 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459918 PE=4 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.3e-179
Identity = 318/322 (98.76%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEE+SKSTETSVLQNQKKAPKTDSKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDED AEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEIKKKMAESK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CmaCh04G020650 vs. ExPASy TrEMBL
Match: A0A0A0KFS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.1e-168
Identity = 296/322 (91.93%), Postives = 309/322 (95.96%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEE+    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEI+K+MA+SK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of CmaCh04G020650 vs. ExPASy TrEMBL
Match: A0A6J1BYC6 (zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111006576 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.2e-167
Identity = 299/323 (92.57%), Postives = 312/323 (96.59%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTGENQQPEQVCSFFKKPTKNKNIRKRT+DEDEE+   TETS+L NQKKA KT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTIDEDEEEDSKTETSLLLNQKKALKTESKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKS+L+NESNVESDKPIFQFESSKEIQVHHDS+ATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSSLSNESNVESDKPIFQFESSKEIQVHHDSKATATLETETEFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGE-KLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIR 180
           LKQA+EALKGKGKSSG E KLYKGVNAYVDYKAGFRRE TISSEKAGGAHGPLRASAHIR
Sbjct: 121 LKQADEALKGKGKSSGDEKKLYKGVNAYVDYKAGFRREQTISSEKAGGAHGPLRASAHIR 180

Query: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMR 240
           ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM 
Sbjct: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG 240

Query: 241 SDDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFV 300
           SD+GDED AEQSDEDEEDALPFACFICREPFVDPV+TKCKHYFCEHCALK HAKNKKCFV
Sbjct: 241 SDEGDEDTAEQSDEDEEDALPFACFICREPFVDPVMTKCKHYFCEHCALKHHAKNKKCFV 300

Query: 301 CNQPTLGIFNTAHEIKKKMAESK 323
           CNQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 CNQPTLGIFNTAHEIRKKMAQSK 323

[Close]

BLAST of CmaCh04G020650 vs. ExPASy TrEMBL
Match: A0A1S3CS03 (zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103504086 PE=4 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 5.9e-167
Identity = 296/322 (91.93%), Postives = 308/322 (95.65%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEE+    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++L+NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDED +EQSDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of CmaCh04G020650 vs. NCBI nr
Match: XP_022971769.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 644.0 bits (1660), Expect = 6.7e-181
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC
Sbjct: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEIKKKMAESK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CmaCh04G020650 vs. NCBI nr
Match: XP_023548600.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548608.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548618.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >KAG7032517.1 Zinc finger CCCH domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 637.9 bits (1644), Expect = 4.8e-179
Identity = 318/322 (98.76%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKS+ETSVLQNQKKAPKTDSKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDED AEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEIKKKMAESK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CmaCh04G020650 vs. NCBI nr
Match: XP_022958735.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 637.9 bits (1644), Expect = 4.8e-179
Identity = 318/322 (98.76%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEE+SKSTETSVLQNQKKAPKTDSKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDED AEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEIKKKMAESK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of CmaCh04G020650 vs. NCBI nr
Match: KAG6601808.1 (Zinc finger CCCH domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 636.3 bits (1640), Expect = 1.4e-178
Identity = 317/321 (98.75%), Postives = 319/321 (99.38%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKS+ETSVLQNQKKAPKTDSKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDED AEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAES 322
           NQPTLGIFNTAHEIKKKMAES
Sbjct: 301 NQPTLGIFNTAHEIKKKMAES 321

[Close]

BLAST of CmaCh04G020650 vs. NCBI nr
Match: XP_004149426.1 (zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypothetical protein Csa_018272 [Cucumis sativus])

HSP 1 Score: 599.4 bits (1544), Expect = 1.9e-167
Identity = 296/322 (91.93%), Postives = 309/322 (95.96%), Query Frame = 0


Query: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEE+    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIKKKMAESK 323
           NQPTLGIFNTAHEI+K+MA+SK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of CmaCh04G020650 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 473.8 bits (1218), Expect = 1.1e-133
Identity = 236/318 (74.21%), Postives = 270/318 (84.91%), Query Frame = 0


Query: 6   ENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKS-TETSVLQNQKKAPKTDSKLYFSSG 65
           +  Q +QVC+FFKKPTK+KNIRKRT+D DEED  S +E+S+LQN KK  K DSKLYFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 66  PSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQA 125
           PSKS+ T     E  + +F ++SSKEIQV +DS ATATLETETDF++DARAIRERVLK+A
Sbjct: 82  PSKSSTTTSGAPE--RSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 126 EEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARF 185
           +EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR SARF
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARF 201

Query: 186 DYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSDDGD 245
           DYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +D D
Sbjct: 202 DYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDED 261

Query: 246 EDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCNQPT 305
           ++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFCEHCALK H KNKKCFVCNQPT
Sbjct: 262 DEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT 321

Query: 306 LGIFNTAHEIKKKMAESK 323
           +GIFN AHEIKK+MAE +
Sbjct: 322 MGIFNAAHEIKKRMAEER 336

[Close]

BLAST of CmaCh04G020650 vs. TAIR 10
Match: AT5G06420.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-132
Identity = 232/321 (72.27%), Postives = 269/321 (83.80%), Query Frame = 0


Query: 3   DTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKS-TETSVLQNQKKAPKTDSKLYF 62
           D   NQ+ +QVC+FFKKPTK+KNIRKRT+D DEED  S +E+S+LQN KK  K DS LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS       ++   ++P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPS-----TRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALK H KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIKKKMAESK 323
           QPT+GIFN AHEIKK+MAE +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of CmaCh04G020650 vs. TAIR 10
Match: AT5G06420.2 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-132
Identity = 232/321 (72.27%), Postives = 269/321 (83.80%), Query Frame = 0


Query: 3   DTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKS-TETSVLQNQKKAPKTDSKLYF 62
           D   NQ+ +QVC+FFKKPTK+KNIRKRT+D DEED  S +E+S+LQN KK  K DS LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS       ++   ++P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPS-----TRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALK H KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIKKKMAESK 323
           QPT+GIFN AHEIKK+MAE +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of CmaCh04G020650 vs. TAIR 10
Match: AT4G01023.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 4.7e-23
Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 209 MHDRGDYKSGWQLEKEWEEVEKARKRKLAMRSDDGDEDVAEQSDEDEEDALPFACFICRE 268
           + D        +LEK  ++++K   RKL        E     + E+++DALP AC IC+ 
Sbjct: 40  VEDEDSNNESSRLEKLEKKIKKETARKL--------ETDFVLTGEEDDDALPLACSICQN 99

Query: 269 PFVDPVVTKCKHYFCEHCALKRHAKNKKCFVCNQPTLGIFNTAHEIKKKMAESK 323
           PF+DPVVT C HYFC+ CALK H +N  CFVCN+PTLG+F+TA EIK+++ E +
Sbjct: 100 PFLDPVVTNCNHYFCDKCALKHHTENDTCFVCNEPTLGLFDTAVEIKERIEEER 145

The following BLAST results are available for this feature:

BLAST of CmaCh04G020650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX84	1.6e-132	74.21	Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FNG6	1.7e-131	72.27	Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6K4V3	3.0e-115	66.67	Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX...	[more]
Q67ER4	1.4e-48	38.79	E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1	[more]
O15541	2.4e-48	39.70	E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1	[more]

BLAST of CmaCh04G020650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I9H7	3.2e-181	100.00	zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1H4B5	2.3e-179	98.76	zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0KFS0	9.1e-168	91.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1	[more]
A0A6J1BYC6	1.2e-167	92.57	zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S3CS03	5.9e-167	91.93	zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of CmaCh04G020650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971769.1	6.7e-181	100.00	zinc finger CCCH domain-containing protein 1 [Cucurbita maxima]	[more]
XP_023548600.1	4.8e-179	98.76	zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_022958735.1	4.8e-179	98.76	zinc finger CCCH domain-containing protein 1 [Cucurbita moschata]	[more]
KAG6601808.1	1.4e-178	98.75	Zinc finger CCCH domain-containing protein 1, partial [Cucurbita argyrosperma su...	[more]
XP_004149426.1	1.9e-167	91.93	zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypot...	[more]

BLAST of CmaCh04G020650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01350.1	1.1e-133	74.21	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.1	1.2e-132	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.2	1.2e-132	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT4G01023.1	4.7e-23	45.61	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 263..300 e-value: 2.7E-5 score: 33.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 263..301 score: 10.556635
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 185..212 e-value: 1.8E-7 score: 40.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 186..211 e-value: 6.3E-10 score: 38.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 185..213 score: 14.577143
None	No IPR available	GENE3D	4.10.1000.10		coord: 183..217 e-value: 1.8E-6 score: 29.2
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 262..304 e-value: 3.8E-9 score: 36.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 1..321
None	No IPR available	CDD	cd16539	RING-HC_RNF113A_B	coord: 261..301 e-value: 1.27373E-24 score: 91.9083
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 262..306
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 261..320 e-value: 1.4E-15 score: 58.6
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 1..321
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 278..287
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 184..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020650.1	CmaCh04G020650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding