CmaCh04G020460 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Translocase subunit seca
Location	Cma_Chr04: 13391570 .. 13393748 (+)
RNA-Seq Expression	CmaCh04G020460
Synteny	CmaCh04G020460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCTCTCTCTCTCCTCTTTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGCCTTGCCCCATCTTATAACACGCTCCTCGTCTTCCTTCCTCCCCTCTCTCTCTTTCCGCTCAATATTTTCTCGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGGTATGGTTGCTCTTATGGCTTTTTTCTGCGACTCTGTTTCTTATTGCTTCTAACTTCCATGCTCTTCCACCTCAAACTTGCAATTTTCAGATCTCTGTACAACACCAATTACTTCCCACTTTCGTAACCTCTTGCATGATTCAGTTCAAAAAAAAAAGGAAAAAAAGAACCTGATTTTTGAGCTAGATCTATTGGGCGATTCACTTTTTCTGGGTTCTTGATTTTAATTTTTGTTTCTGTGAATTGGGGGGGTTTTTTTTCTTCTTGTTTGTGTTCAAGATGTGAACTTGAGCTGCTTGATTTTGATTTGTTTGACCAGATCTTGTTTTTCTCTTACATCTAATAAGGCTATACTCTTGTCCGTACTAACAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCCGCAGACACCGACCGCCGTGAACGACTTGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACGCCACCGCCAACGACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAATGATGCTTTGGATCTTCTCTTCTTTAAGGTACATAATTTTGCAAAGCTATTAAAACTCAAATTGATCCAACAAGAGGATTATTAATTAATTTGTTCTTGTGTGCGGTTAACAGGGAGGTTGTGATTTGGAGAATTTTAAGAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTCTTTTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAACAAAAACCTAACCGATTTGAGCGGAGCCGATCCAATGATGTGGATGAAGAAGGAAAAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAAGGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCCTTGTTAGGTTTGTGTCTATTTAGTTGAGTCGAGGGTTGATTGAGAGAGAGACAATTCATAGCAGCTTGTGAATGAGCAAACATGTACAAATGAAGCTGCAAATTAGGTATGAAACACAAGCATTCATATCTTAAATTTTCATTTCTCTTCTACCCTTTTGCTTCCTTCTTATGCTTTCATTTCCTACTTCCTCTACAAAATATATGACCCATTTCTTAATCATCTTATATTTGTAGTTAAGAGTGGGAAATTTTGAGTATAATCAACTGATTTATTGATGTTTATGGAGGTATTGTTAATTAGGTGTAAACGAGGTATGAAGGCTTTGAGTCTTATCTGTGAGGGTGAGGATAAACCATACATTAAGCGCACTGGGAGTGCCCATAGTTGAGATATTCTTTTCTTCATATTTAGTTTCTTGAAGGGTATCACCGTGTTCACTTTGATCCTCTTGATTCGCACTAGTTGGTCTTTCTTCAAACCGTATTTGCAGGACAAGGAAATGAAGGTCTTGATGATTGTGATTCCACCGAGCCATTTGAGCAAGATTGGGTCACTTGGAAACATGTGTTTTTGCTTGTTCATGTCATTTGTTGCCGTGTTGTTTCCTTCCCCATTGTTTGTTCTTTCAAATTCGAAAGGAGTTTTTGGAGTTAACTTTAGAAGGATTTCACACAAATTTTGTGAAGAAAGTCAAATTTGATTCTGACTTAGAGGTAGTGTTCCGTTAACCATTTTGGATAGATTTTGTACTCTATTACTTATTGCTGTGATTGACTAAAAATTATGAGAAAAATACAAATGTGTAGAAGGAT

mRNA sequence

CTTTTCTCTCTCTCTCCTCTTTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGCCTTGCCCCATCTTATAACACGCTCCTCGTCTTCCTTCCTCCCCTCTCTCTCTTTCCGCTCAATATTTTCTCGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCCGCAGACACCGACCGCCGTGAACGACTTGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACGCCACCGCCAACGACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAATGATGCTTTGGATCTTCTCTTCTTTAAGGGAGGTTGTGATTTGGAGAATTTTAAGAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTCTTTTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAACAAAAACCTAACCGATTTGAGCGGAGCCGATCCAATGATGTGGATGAAGAAGGAAAAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAAGGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCCTTGTTAGGTTTGTGTCTATTTAGTTGAGTCGAGGGTTGATTGAGAGAGAGACAATTCATAGCAGCTTGTGAATGAGCAAACATGTACAAATGAAGCTGCAAATTAGGTATGAAACACAAGCATTCATATCTTAAATTTTCATTTCTCTTCTACCCTTTTGCTTCCTTCTTATGCTTTCATTTCCTACTTCCTCTACAAAATATATGACCCATTTCTTAATCATCTTATATTTGTAGTTAAGAGTGGGAAATTTTGAGTATAATCAACTGATTTATTGATGTTTATGGAGGTATTGTTAATTAGGTGTAAACGAGGTATGAAGGCTTTGAGTCTTATCTGTGAGGGTGAGGATAAACCATACATTAAGCGCACTGGGAGTGCCCATAGTTGAGATATTCTTTTCTTCATATTTAGTTTCTTGAAGGGTATCACCGTGTTCACTTTGATCCTCTTGATTCGCACTAGTTGGTCTTTCTTCAAACCGTATTTGCAGGACAAGGAAATGAAGGTCTTGATGATTGTGATTCCACCGAGCCATTTGAGCAAGATTGGGTCACTTGGAAACATGTGTTTTTGCTTGTTCATGTCATTTGTTGCCGTGTTGTTTCCTTCCCCATTGTTTGTTCTTTCAAATTCGAAAGGAGTTTTTGGAGTTAACTTTAGAAGGATTTCACACAAATTTTGTGAAGAAAGTCAAATTTGATTCTGACTTAGAGGTAGTGTTCCGTTAACCATTTTGGATAGATTTTGTACTCTATTACTTATTGCTGTGATTGACTAAAAATTATGAGAAAAATACAAATGTGTAGAAGGAT

Coding sequence (CDS)

ATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCCGCAGACACCGACCGCCGTGAACGACTTGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACGCCACCGCCAACGACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAATGATGCTTTGGATCTTCTCTTCTTTAAGGGAGGTTGTGATTTGGAGAATTTTAAGAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTCTTTTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAA

Protein sequence

MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

Homology

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BLAST of CmaCh04G020460 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.2e-95
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60

Query: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120
           ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CmaCh04G020460 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.8e-93
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AAND
Sbjct: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120
           ALDLLFFKGGCDLENF SSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CmaCh04G020460 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63
Identity = 126/158 (79.75%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 16  EMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLEN 75
           E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC LEN
Sbjct: 6   EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLEN 65

Query: 76  FKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTD 135
           F SS+ QLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPPS  
Sbjct: 66  FNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPLSPPPSAG 125

Query: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 126 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of CmaCh04G020460 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 125/158 (79.11%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 16  EMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLEN 75
           E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC LE 
Sbjct: 6   EEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEK 65

Query: 76  FKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTD 135
           F SS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPPS  
Sbjct: 66  FNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPPSAG 125

Query: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 126 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of CmaCh04G020460 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 124/156 (79.49%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 18  MRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLENFK 77
           MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC LE F 
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEKFN 60

Query: 78  SSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRN 137
           SS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPPS  R 
Sbjct: 61  SSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPPSAGRK 120

Query: 138 GGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

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BLAST of CmaCh04G020460 vs. NCBI nr
Match: XP_022971782.1 (uncharacterized protein LOC111470460 [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 6.7e-95
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60

Query: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120
           ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CmaCh04G020460 vs. NCBI nr
Match: KAG7032498.1 (hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120
           ALDLLF KGGCDLENF SSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS
Sbjct: 61  ALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CmaCh04G020460 vs. NCBI nr
Match: XP_022923501.1 (uncharacterized protein LOC111431174 [Cucurbita moschata])

HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AAND
Sbjct: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120
           ALDLLFFKGGCDLENF SSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CmaCh04G020460 vs. NCBI nr
Match: KAG6601783.1 (hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.4 bits (890), Expect = 6.9e-92
Identity = 167/173 (96.53%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AAND
Sbjct: 78  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 137

Query: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120
           ALDLLF KGGCDLENF SS TQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS
Sbjct: 138 ALDLLFLKGGCDLENFNSSITQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 197

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 198 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 250

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BLAST of CmaCh04G020460 vs. NCBI nr
Match: XP_023538993.1 (uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 2.6e-91
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120
           ALDLLFFK GCDLENF S+STQLASSPPYLCGTPPSRVANPLIQDARFG EKPKMLPVFS
Sbjct: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CmaCh04G020460 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 86/188 (45.74%), Postives = 110/188 (58.51%), Query Frame = 0


Query: 1   MNQVAVQRNVFS----VREEMMRAADTDRRERLVCPKPRRLGLINATANDNP-----FRH 60
           MN  AVQ N F+    +R   +   + D +  +VCPKPRR+GL N   + +      F H
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERD-QTTVVCPKPRRIGLRNNHHHPSRSLRCYFSH 60

Query: 61  RF---DSIAANDALDLLFFKGGCDLENFKSSSTQLASSP-PYLCGTPPSRVANPLIQDAR 120
           +    +S A  D LD++  K G   E     + Q+  SP P+LCG+PPSRVANPL QDAR
Sbjct: 61  QLELCESKAETDILDIILTKDGYGAEQV---NKQVIDSPSPFLCGSPPSRVANPLTQDAR 120

Query: 121 FGNEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERR 174
           F +E   +  V  P++  PP  SP  S+ R GG  VR NFGN P VR+EGFDC LDR+ R
Sbjct: 121 FRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSR 180

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BLAST of CmaCh04G020460 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 84/187 (44.92%), Postives = 106/187 (56.68%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60
           MN   +Q+N F  REEMM     DR++ +VCPKPRR+GL+ A     P R      AA  
Sbjct: 67  MNHCNLQQNAFMSREEMM---GFDRKDLVVCPKPRRVGLL-ANNVIRPLRLHMSQAAA-- 126

Query: 61  ALDLLFFKGGCDL-------ENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKP 120
             DL   K G +L       E+  +    L+SSPPY  G+PPSR ANPL QDARF +EK 
Sbjct: 127 --DLCDSKAGAELLEIIRRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKL 186

Query: 121 KMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRN 174
             +   SP + P      P  S   S+  + G VR  FG N PAVR+EGFDC L+R+R+N
Sbjct: 187 NPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQN 244

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BLAST of CmaCh04G020460 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-23
Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINATANDN---PFRHRF--- 60
           MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N  ++ +      H+    
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELC 61

Query: 61  DSIAANDALDLLFFKGGCDLENFKSSSTQLASSPP-YLCGTPPSRVANPLIQDARFGNEK 120
           +S + ++ LD +  KGG      +   T+   +PP +  G+PPSRV+NPL +D+ F  E 
Sbjct: 62  ESNSGSEILDFILTKGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE- 121

Query: 121 PKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRS 174
             +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRS
Sbjct: 122 --LLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRS 176

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BLAST of CmaCh04G020460 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-23
Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINATANDN---PFRHRF--- 60
           MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N  ++ +      H+    
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELC 61

Query: 61  DSIAANDALDLLFFKGGCDLENFKSSSTQLASSPP-YLCGTPPSRVANPLIQDARFGNEK 120
           +S + ++ LD +  KGG      +   T+   +PP +  G+PPSRV+NPL +D+ F  E 
Sbjct: 62  ESNSGSEILDFILTKGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE- 121

Query: 121 PKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRS 174
             +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRS
Sbjct: 122 --LLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRS 176

[Close]

BLAST of CmaCh04G020460 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-22
Identity = 75/177 (42.37%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAAD--TDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAA 60
           MN  ++Q+N F  REE        +   + +VCPKPRR     A     PFR  F    A
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRR-----ANNVIRPFRLHFSLSGA 60

Query: 61  NDALDLLFFKGGCD-LENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLP 120
           +D  D    K G D L+ F+   +  + SPP+  G+PPSR ANPL QDARFG+EK   L 
Sbjct: 61  DDVCD---SKAGEDLLDIFRRKESVSSRSPPFFLGSPPSRAANPLAQDARFGDEK---LN 120

Query: 121 VFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA 174
             SP ++P     P ++    G  R  FG  PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 121 TVSPSLSP---LLPSASRVKSGCGRMKFGVKPATVRVEGFDC-LNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:

BLAST of CmaCh04G020460 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G020460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2X1	3.2e-95	100.00	uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460...	[more]
A0A6J1E6Z2	6.8e-93	97.11	uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A0A0KRF1	1.1e-63	79.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1	[more]
A0A1S3CR46	7.3e-63	79.11	uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=...	[more]
A0A5D3C147	1.2e-62	79.49	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh04G020460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971782.1	6.7e-95	100.00	uncharacterized protein LOC111470460 [Cucurbita maxima]	[more]
KAG7032498.1	1.4e-92	97.11	hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022923501.1	1.4e-92	97.11	uncharacterized protein LOC111431174 [Cucurbita moschata]	[more]
KAG6601783.1	6.9e-92	96.53	hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023538993.1	2.6e-91	95.95	uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G020460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	1.4e-29	45.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16110.1	1.7e-27	44.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	5.6e-23	40.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	5.6e-23	40.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02555.1	4.7e-22	42.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..141
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 1..173
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020460.1	CmaCh04G020460.1	mRNA