CmaCh04G020400 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cma_Chr04: 13244639 .. 13244929 (+)
RNA-Seq Expression	CmaCh04G020400
Synteny	CmaCh04G020400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCACTCAATCGGGCCGTACGAGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTATGATCATGCGTCGAATAAATACGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCAGTGCGGCTTGAATGTGCTATAGTGCCCTACAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGTAACTATATTGGGGAAAAGCTTTATGGTTCTTCTTTGTAA

mRNA sequence

ATGATTCACTCAATCGGGCCGTACGAGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTATGATCATGCGTCGAATAAATACGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCAGTGCGGCTTGAATGTGCTATAGTGCCCTACAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGTAACTATATTGGGGAAAAGCTTTATGGTTCTTCTTTGTAA

Coding sequence (CDS)

ATGATTCACTCAATCGGGCCGTACGAGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTATGATCATGCGTCGAATAAATACGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCAGTGCGGCTTGAATGTGCTATAGTGCCCTACAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGTAACTATATTGGGGAAAAGCTTTATGGTTCTTCTTTGTAA

Protein sequence

MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSVRLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL

Homology

[Close]

BLAST of CmaCh04G020400 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.9e-27
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY EN+ A  +P+   A AVK+W +EK  YD+ SN  VGG CGHYTQ+VWR+SV
Sbjct: 69  MIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSV 128

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYG 94
           RL CA V       F+ CNYDPPGN+IG++ +G
Sbjct: 129 RLGCARVRSNNGWFFITCNYDPPGNFIGQRPFG 160

[Close]

BLAST of CmaCh04G020400 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           MIHS GPY EN+ A  +P+   A AVK+W +EK  YD+ SN    G+ CGHYTQ+VWR S
Sbjct: 67  MIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKS 126

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLYG 94
           VRL CA V   +   F+ CNYDPPGNYI + +YG
Sbjct: 127 VRLGCARVRCNSGWVFITCNYDPPGNYI-DNVYG 158

[Close]

BLAST of CmaCh04G020400 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.7e-22
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           ++HS G Y EN+  G     T A AV++W +EK  YDH SN    G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           VR+ CA V        V CNYDPPGNY GE  Y
Sbjct: 136 VRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmaCh04G020400 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.8e-21
Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           ++HS G Y EN+  G     T A AV++W +EK  YDH SN    G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           VR+ CA V        V CNYDPPGN IG+  Y
Sbjct: 136 VRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of CmaCh04G020400 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20
Identity = 47/93 (50.54%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           ++HS G Y EN+  G     T A AV++W NEK  Y H SN    G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           VR+ CA V        V CNYDPPGN IG+  Y
Sbjct: 136 VRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of CmaCh04G020400 vs. ExPASy TrEMBL
Match: A0A6J1I6Q4 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470474 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.2e-52
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV
Sbjct: 18  MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 77

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
           RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL
Sbjct: 78  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 113

[Close]

BLAST of CmaCh04G020400 vs. ExPASy TrEMBL
Match: A0A6J1IH54 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111475189 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 85/94 (90.43%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENIVAGYYPEFTGADAVKLWANEK LYDHASNK VGGECGHYTQMVWRSSV
Sbjct: 63  MIHSTGPYGENIVAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGS 95
           RL CA VP KANSQFVVCNYDPPGNYIGEK Y S
Sbjct: 123 RLGCARVPCKANSQFVVCNYDPPGNYIGEKRYDS 156

[Close]

BLAST of CmaCh04G020400 vs. ExPASy TrEMBL
Match: A0A6J1I937 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472190 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43
Identity = 84/94 (89.36%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENI AGYYPEFTGADAVKLWANEK LYDHASNK VGGECGHYTQMVWRSSV
Sbjct: 63  MIHSTGPYMENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGS 95
           RL CA VPYKANSQFVVCNYDPP NYIGEK Y S
Sbjct: 123 RLGCARVPYKANSQFVVCNYDPPSNYIGEKPYDS 156

[Close]

BLAST of CmaCh04G020400 vs. ExPASy TrEMBL
Match: A0A6J1IDM7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472192 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.7e-43
Identity = 84/94 (89.36%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENI AGYYPEFTGADAVKLWANEK LYDHASNK VGGECGHYTQMVWRSSV
Sbjct: 98  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 157

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGS 95
           RL CA VP KANSQFVVCNYDPPGNYIGEK Y S
Sbjct: 158 RLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDS 191

[Close]

BLAST of CmaCh04G020400 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43
Identity = 84/94 (89.36%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENI AGYYPEFTGADAVKLWANEK LYDHASNK VGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGS 95
           RL CA VP KANSQFVVCNYDPPGNYIGEK Y S
Sbjct: 131 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: XP_022971795.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 8.7e-52
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV
Sbjct: 18  MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 77

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
           RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL
Sbjct: 78  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 113

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: XP_023538226.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.2 bits (474), Expect = 6.7e-44
Identity = 85/94 (90.43%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENI AGYYPEFTGADAVKLWANEKLLYDHA NK VGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGS 95
           RL CA VPYKANSQFVVCNYDPPGNYIGEK Y S
Sbjct: 131 RLGCARVPYKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: XP_022975595.1 (basic form of pathogenesis-related protein 1-like, partial [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 85/94 (90.43%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENIVAGYYPEFTGADAVKLWANEK LYDHASNK VGGECGHYTQMVWRSSV
Sbjct: 63  MIHSTGPYGENIVAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGS 95
           RL CA VP KANSQFVVCNYDPPGNYIGEK Y S
Sbjct: 123 RLGCARVPCKANSQFVVCNYDPPGNYIGEKRYDS 156

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: XP_023521427.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 85/96 (88.54%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENI AGYYPEFTGADAVKLWANEK LYDH SNK VGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHVSNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
           RL CA VP KANSQFVVCNYDPPGNYIGEK Y SSL
Sbjct: 131 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSSL 166

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: XP_022973606.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 4.3e-43
Identity = 84/94 (89.36%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY ENI AGYYPEFTGADAVKLWANEK LYDHASNK VGGECGHYTQMVWRSSV
Sbjct: 63  MIHSTGPYMENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGS 95
           RL CA VPYKANSQFVVCNYDPP NYIGEK Y S
Sbjct: 123 RLGCARVPYKANSQFVVCNYDPPSNYIGEKPYDS 156

[Close]

BLAST of CmaCh04G020400 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 2.6e-22
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKY---VGGECGHYTQMVWR 60
           ++HS GP+ ENI A    E +  DA ++W NEK  YD+ SN      GG C HYTQ+VW+
Sbjct: 68  LVHSNGPFGENI-AMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWK 127

Query: 61  SSVRLECAIVPYKANSQFVVCNYDPPGNYIGEK 91
           ++VRL CA V   +   F+ CNYDPPGNYIGEK
Sbjct: 128 NTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEK 159

[Close]

BLAST of CmaCh04G020400 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-21
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVG-GECGHYTQMVWRSS 60
           M HS+GP+ EN+ AG +   +G  A + W  EK  YD+ SN   G G CGHYTQ+VWR S
Sbjct: 84  MKHSLGPFGENLAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDS 143

Query: 61  VRLECAIVPYKANSQ-FVVCNYDPPGNYIGEKLY 93
           VRL CA V  K +   +V+C+YDPPGNYIG++ Y
Sbjct: 144 VRLGCASVRCKNDEYIWVICSYDPPGNYIGQRPY 176

[Close]

BLAST of CmaCh04G020400 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-21
Identity = 47/94 (50.00%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVG-GECGHYTQMVWRSS 60
           + HS GPY EN+  G   +FT   AV+ W  E   Y+H +N   G G CGHYTQ+VWR +
Sbjct: 117 LTHSTGPYGENLFWGSGSDFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRET 176

Query: 61  VRLECA-IVPYKANSQFVVCNYDPPGNYIGEKLY 93
            RL CA +V       F+ CNYDPPGNY+GEK Y
Sbjct: 177 RRLGCARVVCENGAGVFITCNYDPPGNYVGEKPY 210

[Close]

BLAST of CmaCh04G020400 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.2e-21
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGG-ECGHYTQMVWRSS 60
           ++HS GPY EN+  G    F+   AVKLW +EK  Y +A N   GG +C HYTQ+VWR S
Sbjct: 69  LVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDS 128

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           V++ CA V       FV CNY+ PGN++GE  Y
Sbjct: 129 VKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmaCh04G020400 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 99.0 bits (245), Expect = 2.2e-21
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           +IHS GPY EN+  G   + +G  AV +W +EK  Y++A+N    G CGHYTQ+VWR SV
Sbjct: 72  LIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANT-CNGVCGHYTQVVWRKSV 131

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           RL CA V        + CNYDP GNY+ EK Y
Sbjct: 132 RLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

The following BLAST results are available for this feature:

BLAST of CmaCh04G020400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	5.9e-27	56.99	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
Q08697	2.3e-23	55.32	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P08299	9.7e-22	51.61	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P07053	2.8e-21	50.54	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09042	1.1e-20	50.54	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]

BLAST of CmaCh04G020400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6Q4	4.2e-52	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IH54	1.2e-43	90.43	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1I937	2.1e-43	89.36	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IDM7	2.7e-43	89.36	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1I475	4.7e-43	89.36	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmaCh04G020400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971795.1	8.7e-52	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_023538226.1	6.7e-44	90.43	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975595.1	2.5e-43	90.43	basic form of pathogenesis-related protein 1-like, partial [Cucurbita maxima]	[more]
XP_023521427.1	2.5e-43	88.54	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973606.1	4.3e-43	89.36	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]

BLAST of CmaCh04G020400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19690.1	2.6e-22	51.61	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	1.0e-21	52.13	pathogenesis-related protein-1-like	[more]
AT4G25790.1	1.0e-21	50.00	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50060.1	2.2e-21	48.39	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	2.2e-21	50.00	pathogenesis-related gene 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 25..38 score: 38.2 coord: 48..64 score: 57.65 coord: 75..88 score: 58.05
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..92
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 1..88 e-value: 1.6E-8 score: 31.3
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 14..80 e-value: 1.1E-11 score: 45.6
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 2..96 e-value: 4.5E-25 score: 90.5
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 2..92
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 1..92
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 75..86
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 49..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020400.1	CmaCh04G020400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane