CmaCh04G020380 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G020380
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionbasic form of pathogenesis-related protein 1-like
LocationCma_Chr04: 13235466 .. 13235972 (+)
RNA-Seq ExpressionCmaCh04G020380
SyntenyCmaCh04G020380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTGGACTCAAACCCTTCTGATCATGGTCGCTTTCATGGCCACTTTCATGTTCCTCCTCGCCCTAACCAACTCTCAAAACACTCCCAGTGACTACCTCGCGCTTCACAACCGCGCTCGAGCCCAAGTCGGTGTTGGCCCCATGCAATGGAGCAACATCGTGGCCGCGTACGCTAAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCAAGATTCACTCAATTGGGCCGTACGGGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCAGATGTGGTGAAGCTGTGGGCGAACGAGAAGACGCTGTATGATCATGCGTTGAATAAATGCATGGGTGGTGAATGTAGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTAAGTTTGTTGCTTGCAATTATGATCTTCCGAGAAACTATATTGAGGAAAAGCCTAATGATTCTTCGATGGTATGA

mRNA sequence

ATGATGTGGACTCAAACCCTTCTGATCATGGTCGCTTTCATGGCCACTTTCATGTTCCTCCTCGCCCTAACCAACTCTCAAAACACTCCCAGTGACTACCTCGCGCTTCACAACCGCGCTCGAGCCCAAGTCGGTGTTGGCCCCATGCAATGGAGCAACATCGTGGCCGCGTACGCTAAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCAAGATTCACTCAATTGGGCCGTACGGGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCAGATGTGGTGAAGCTGTGGGCGAACGAGAAGACGCTGTATGATCATGCGTTGAATAAATGCATGGGTGGTGAATGTAGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTAAGTTTGTTGCTTGCAATTATGATCTTCCGAGAAACTATATTGAGGAAAAGCCTAATGATTCTTCGATGGTATGA

Coding sequence (CDS)

ATGATGTGGACTCAAACCCTTCTGATCATGGTCGCTTTCATGGCCACTTTCATGTTCCTCCTCGCCCTAACCAACTCTCAAAACACTCCCAGTGACTACCTCGCGCTTCACAACCGCGCTCGAGCCCAAGTCGGTGTTGGCCCCATGCAATGGAGCAACATCGTGGCCGCGTACGCTAAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCAAGATTCACTCAATTGGGCCGTACGGGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCAGATGTGGTGAAGCTGTGGGCGAACGAGAAGACGCTGTATGATCATGCGTTGAATAAATGCATGGGTGGTGAATGTAGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTAAGTTTGTTGCTTGCAATTATGATCTTCCGAGAAACTATATTGAGGAAAAGCCTAATGATTCTTCGATGGTATGA

Protein sequence

MMWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAYAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRHYTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV
Homology
[Close]
BLAST of CmaCh04G020380 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.2e-44
Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 0 

Query: 7   LLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAYAEKR 66
           L  +VA   TF  L+  + +QN+P DYL  HN AR QVGVGPM W N +AAYA+ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 67  KGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRHYTQMV 126
            GDC  IHS GPYGEN+ A  +P+   A  VK+W +EK  YD+  N C+GG C HYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 127 WRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           WR+SVRLGCARV       F+ CNYD P N+I ++P
Sbjct: 124 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRP 158

[Close]
BLAST of CmaCh04G020380 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-39
Identity = 78/162 (48.15%), Postives = 106/162 (65.43%), Query Frame = 0 

Query: 1   MMWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAK 60
           M +T     ++ F+A    L+  + +Q++P DYL +HN+AR  VGVGPMQW   VAAYA+
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  AYAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECR 120
           +YAE+ +G+C  IHS GPYGEN+  G   + +G   V +W +EK  Y++A N C  G C 
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCG 120

Query: 121 HYTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           HYTQ+VWR SVRLGCA+V C      ++CNYD   NY+ EKP
Sbjct: 121 HYTQVVWRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKP 160

[Close]
BLAST of CmaCh04G020380 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.9e-38
Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 3   WTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAY 62
           +++ L+I+ A +     L+    +Q++  DY+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGA---LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 63  AEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRHY 122
           A + KGDC  +HS GPYGEN+ A    + +G   V LW NEK  Y++  N C  G C HY
Sbjct: 66  ANQLKGDCRLVHSRGPYGENL-AKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 125

Query: 123 TQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           TQ+VWR+SVRLGCA+V C      ++CNYD P NY  +KP
Sbjct: 126 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKP 160

[Close]
BLAST of CmaCh04G020380 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.9e-37
Identity = 78/155 (50.32%), Postives = 100/155 (64.52%), Query Frame = 0 

Query: 13  FMATFMFLLALTNSQ-NTP-SDYLALHNRARAQVGVGPMQWSNIVAAYAKAYAEKRKGDC 72
           F+A F+  +   +SQ  TP  ++L  HN AR +VGVGPM W + +AAYA+ YA +R  DC
Sbjct: 6   FVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDC 65

Query: 73  AKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGE-CRHYTQMVWRS 132
             IHS GPYGEN+ A  +P+   A  VK+W +EK  YD+  N C  G+ C HYTQ+VWR 
Sbjct: 66  GMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRK 125

Query: 133 SVRLGCARVPCKANSKFVACNYDLPRNYIEEKPND 165
           SVRLGCARV C +   F+ CNYD P NYI+    D
Sbjct: 126 SVRLGCARVRCNSGWVFITCNYDPPGNYIDNVYGD 159

[Close]
BLAST of CmaCh04G020380 vs. ExPASy Swiss-Prot
Match: P04284 (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-36
Identity = 78/159 (49.06%), Postives = 107/159 (67.30%), Query Frame = 0 

Query: 8   LIMVAFMATFMFLLALTNS---QNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAYAE 67
           L  ++ + T + +LA+ +S   QN+P DYLA+HN ARAQVGVGPM W   +A+ A+ YA 
Sbjct: 3   LFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYAN 62

Query: 68  KRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGG-ECRHYT 127
            R GDC  IHS    GEN+  G   +FTG   V+LW +E+  Y++A N+C+GG +CRHYT
Sbjct: 63  SRAGDCNLIHS--GAGENLAKG-GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYT 122

Query: 128 QMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           Q+VWR+SVRLGC R  C     F++CNYD   N+I ++P
Sbjct: 123 QVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRP 158

[Close]
BLAST of CmaCh04G020380 vs. ExPASy TrEMBL
Match: A0A6J1H6J8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460079 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.4e-79
Identity = 143/167 (85.63%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IMVAF+ATF FLLALTN+QN PSDYLALHNRARAQVGVGPMQWSN VA YA+A
Sbjct: 1   MWTQTLPIMVAFIATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLW NEK LYDHALNKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of CmaCh04G020380 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 142/167 (85.03%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IMVAF+ATF+FLLALTN+QN P DYL LHNRARAQVGVGPMQWSN VAAYA+A
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLWANEK LYDHA NKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLVV 167

[Close]
BLAST of CmaCh04G020380 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 140/167 (83.83%), Postives = 147/167 (88.02%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IM AFM TF+FLLALT +QN P DYLALHNRARA+VGVGPMQWSN VAAYA+A
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLWANEK LYDHA NKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of CmaCh04G020380 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 0 

Query: 3   WTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAY 62
           WTQTL IMVAF+ATF+FLLALTN+QN P DYLALHNRARAQVGVGPMQWSN VAAYA+AY
Sbjct: 33  WTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 92

Query: 63  AEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRHY 122
           A+KRKGDCA IHS GPYGENI AGYYPEFTGAD VKLW NEK LYDHA NKC+GGEC HY
Sbjct: 93  AKKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHY 152

Query: 123 TQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           TQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 153 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 198

[Close]
BLAST of CmaCh04G020380 vs. ExPASy TrEMBL
Match: A0A6J1ICC8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474223 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 140/168 (83.33%), Postives = 148/168 (88.10%), Query Frame = 0 

Query: 1   MMWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAK 60
           +MWTQTL IM AFM TF+FLLALT +QN P DYLALHNRARA+VGVGPMQWSN VAAYA+
Sbjct: 27  IMWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQ 86

Query: 61  AYAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECR 120
           AYAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLWANEK LYDHA NKC+GGEC 
Sbjct: 87  AYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECG 146

Query: 121 HYTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           HYTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 147 HYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 194

[Close]
BLAST of CmaCh04G020380 vs. NCBI nr
Match: XP_023522017.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.3 bits (778), Expect = 6.5e-79
Identity = 144/167 (86.23%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IM AFMATFMFLLALTN+QN PSDYLALHNRARAQVGV PMQWSN VAAYA+A
Sbjct: 1   MWTQTLPIMAAFMATFMFLLALTNAQNAPSDYLALHNRARAQVGVDPMQWSNTVAAYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLWANEK LYDHA NKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLVV 167

[Close]
BLAST of CmaCh04G020380 vs. NCBI nr
Match: XP_022958939.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 143/167 (85.63%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IMVAF+ATF FLLALTN+QN PSDYLALHNRARAQVGVGPMQWSN VA YA+A
Sbjct: 1   MWTQTLPIMVAFIATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLW NEK LYDHALNKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of CmaCh04G020380 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 142/167 (85.03%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IMVAF+ATF+FLLALTN+QN P DYL LHNRARAQVGVGPMQWSN VAAYA+A
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLWANEK LYDHA NKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLVV 167

[Close]
BLAST of CmaCh04G020380 vs. NCBI nr
Match: XP_023538576.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 3.2e-78
Identity = 143/167 (85.63%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IM AFMATF+FLLALTN+QNTP  YLALHNRARAQVGVGPMQWSN VAAYA+A
Sbjct: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLWANEK LYDHA NKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of CmaCh04G020380 vs. NCBI nr
Match: XP_022971801.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971802.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974677.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974684.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974688.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975326.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975679.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77
Identity = 140/167 (83.83%), Postives = 147/167 (88.02%), Query Frame = 0 

Query: 2   MWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKA 61
           MWTQTL IM AFM TF+FLLALT +QN P DYLALHNRARA+VGVGPMQWSN VAAYA+A
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 62  YAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRH 121
           YAEKRKGDCA IHS GPYGENI AGYYPEFTGAD VKLWANEK LYDHA NKC+GGEC H
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 122 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKPNDSSMV 169
           YTQMVWRSSVRLGCARVPCKANS+FV CNYD P NYI EKP DS +V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of CmaCh04G020380 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 5.2e-42
Identity = 77/145 (53.10%), Postives = 95/145 (65.52%), Query Frame = 0 

Query: 19  FLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAYAEKRKGDCAKIHSIGP 78
           FL+  TN+QNTP DYL  HN ARAQVGV  + W   +AAYA  Y+  RK DC  +HS GP
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 79  YGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGG-ECRHYTQMVWRSSVRLGCAR 138
           YGEN+  G    F+    VKLW +EK  Y +A N C GG +C HYTQ+VWR SV++GCAR
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCAR 135

Query: 139 VPCKANSKFVACNYDLPRNYIEEKP 163
           V C     FV+CNY+ P N++ E P
Sbjct: 136 VQCTNTWWFVSCNYNSPGNWVGEYP 160

[Close]
BLAST of CmaCh04G020380 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-40
Identity = 78/162 (48.15%), Postives = 106/162 (65.43%), Query Frame = 0 

Query: 1   MMWTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAK 60
           M +T     ++ F+A    L+  + +Q++P DYL +HN+AR  VGVGPMQW   VAAYA+
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  AYAEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECR 120
           +YAE+ +G+C  IHS GPYGEN+  G   + +G   V +W +EK  Y++A N C  G C 
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCG 120

Query: 121 HYTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           HYTQ+VWR SVRLGCA+V C      ++CNYD   NY+ EKP
Sbjct: 121 HYTQVVWRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKP 160

[Close]
BLAST of CmaCh04G020380 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.2e-39
Identity = 78/160 (48.75%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 4   TQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAYA 63
           +Q L + + F   F+ L+    +Q++P D+LA+HNRARA+VGVGP++W   VAAYA+ YA
Sbjct: 7   SQNLFLAITF---FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYA 66

Query: 64  EKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKC-MGGECRHY 123
            +RKGDCA  HS G YGENI A      TG   V +W +E+  YD+  N C    +C HY
Sbjct: 67  NQRKGDCAMKHSSGSYGENI-AWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHY 126

Query: 124 TQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           TQ+VWR+S RLGCA+V C     F+ CNYD P N++ E P
Sbjct: 127 TQVVWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEWP 162

[Close]
BLAST of CmaCh04G020380 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 157.9 bits (398), Expect = 7.1e-39
Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 3   WTQTLLIMVAFMATFMFLLALTNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAY 62
           +++ L+I+ A +     L+    +Q++  DY+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGA---LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 63  AEKRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKCMGGECRHY 122
           A + KGDC  +HS GPYGEN+ A    + +G   V LW NEK  Y++  N C  G C HY
Sbjct: 66  ANQLKGDCRLVHSRGPYGENL-AKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 125

Query: 123 TQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           TQ+VWR+SVRLGCA+V C      ++CNYD P NY  +KP
Sbjct: 126 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKP 160

[Close]
BLAST of CmaCh04G020380 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-36
Identity = 73/161 (45.34%), Postives = 99/161 (61.49%), Query Frame = 0 

Query: 10  MVAFMATFMFLLAL-----TNSQNTPSDYLALHNRARAQVGVGPMQWSNIVAAYAKAYAE 69
           M       +FLLA+     + +++    +L  HN AR +VG+ P+ W + VAAYA +YA 
Sbjct: 1   MSLLKTNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYAN 60

Query: 70  KRKGDCAKIHSIGPYGENIVAGYYPEFTGADVVKLWANEKTLYDHALNKC---MGGECRH 129
           +R  DCA +HS GP+GENI A    E +  D  ++W NEK  YD+  N C    GG C H
Sbjct: 61  QRINDCALVHSNGPFGENI-AMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLH 120

Query: 130 YTQMVWRSSVRLGCARVPCKANSKFVACNYDLPRNYIEEKP 163
           YTQ+VW+++VRLGCA+V C +   F+ CNYD P NYI EKP
Sbjct: 121 YTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKP 160

The following BLAST results are available for this feature:
BLAST of CmaCh04G020380 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P116703.2e-4453.85Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
P331542.4e-3948.15Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1... [more]
Q9ZNS49.9e-3846.88Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1[more]
Q086972.9e-3750.32Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P042841.4e-3649.06Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=... [more]
BLAST of CmaCh04G020380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H6J85.4e-7985.63basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1EQJ71.2e-7885.03basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1I4751.3e-7783.83basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1H3H81.3e-7784.34basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1ICC81.7e-7783.33basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN... [more]
BLAST of CmaCh04G020380 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023522017.16.5e-7986.23basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022958939.11.1e-7885.63basic form of pathogenesis-related protein 1-like [Cucurbita moschata][more]
XP_022930064.12.5e-7885.03basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293... [more]
XP_023538576.13.2e-7885.63basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022971801.12.7e-7783.83basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718... [more]
BLAST of CmaCh04G020380 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50060.15.2e-4253.10CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14610.11.7e-4048.15pathogenesis-related gene 1 [more]
AT4G33720.13.2e-3948.75CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14580.17.1e-3946.88basic pathogenesis-related protein 1 [more]
AT3G19690.12.5e-3645.34CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002413Venom allergen 5-likePRINTSPR00838V5ALLERGENcoord: 118..137
score: 45.0
coord: 49..67
score: 22.37
coord: 94..109
score: 30.86
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 49..67
score: 32.13
coord: 96..109
score: 33.83
coord: 119..135
score: 58.2
coord: 146..159
score: 36.99
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 17..162
IPR014044CAP domainSMARTSM00198SCP_3coord: 28..159
e-value: 2.8E-44
score: 163.1
IPR014044CAP domainPFAMPF00188CAPcoord: 34..151
e-value: 3.7E-20
score: 73.0
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 23..166
e-value: 2.1E-35
score: 124.1
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 20..163
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 17..162
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 30..162
e-value: 1.61527E-60
score: 182.063
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 120..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G020380.1CmaCh04G020380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane