CmaCh04G020300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cma_Chr04: 12944084 .. 12945412 (+)
RNA-Seq Expression	CmaCh04G020300
Synteny	CmaCh04G020300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTTTCATTGCCACTTTCATGTTCCTCCTCGTCCTAACTAATGCTCAAAACGCCCCCGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTTGGCGTCGGCCCCATGCAATGGAGCAAAACTGTGGCCGCGTACGCTCAAGCCTATGCGAAAAAAAGAAAGGGTGACTCCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACCGGGGCAAATGCGGTGAAGTTATGGGCGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCTTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTTCAAAGAGATTTGGTTTTAAAAATTTTATGAATGGTAATAAAGTTTGTGAGAGAATCATGAATTTATGAATTGAAATAAAGTTATGATATTGTCTATAATAGTATTATATTGTCCGGTTTAAGTTAACTCTTGTGACTTTGTTTTGACCTCCTTGAGTTAACTCTTGTGACTTGGTTTTGACCTCTTTGCTCGTAAACCCATGTTCATAGAGTCTCCCCTCTAATTAAGTACATCACAGAGCCACCCCTGAAGCTCGTAGATTTCTAGAACAACCTTCCGTTAATCGAGGCTCGACTACTTTCTTTGGAGCCATTAAACAAAATACACCCTTTGTTCGACACTTTTGACTACAAATTGGAGGCTAACAATTTCTTTGTTCGACATAGCTCAGTTAAGTTCATGGTCTGATAACCATGTTAAGAATCACGAATCTCTACAATGGTATATGATATTTGTCCACTTTAAACATGAGAAAATCTCATAGGTTTGCTTCAGGCTCCGGAAGATGTATTCTTTACTTATAAATCTACGATCATTTCCAAACAATCTTCAATACTAAGAACACCAGCCACCAGCCAATTCCTGTTCCAAGTCACCCGGAAGAAATGCCCTCAGCAGAGATGCGAAAAATCAGTCCACGATGTTTTCCGCCTCCAAATCGAGAGATGCACGGCGGCGTTTAACTCCACTGCACTATGAGACCCACATCGGAGACGAAGGCCCACTGCCGCAACCTAAACTTTGAAAAAAAACATACATATTCCTAAACTTTGAAAACAGTAGGATACGAAAATGTTTAACCATTTGTTATTTTAAAATGGTGTAATAAGTCTCCAAATTTTAAAAAATTAA

mRNA sequence

ATGGCTGTTTTCATTGCCACTTTCATGTTCCTCCTCGTCCTAACTAATGCTCAAAACGCCCCCGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTTGGCGTCGGCCCCATGCAATGGAGCAAAACTGTGGCCGCGTACGCTCAAGCCTATGCGAAAAAAAGAAAGGGTGACTCCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACCGGGGCAAATGCGGTGAAGTTATGGGCGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCTTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCATCTCCAAATTTTAAAAAATTAA

Coding sequence (CDS)

ATGGCTGTTTTCATTGCCACTTTCATGTTCCTCCTCGTCCTAACTAATGCTCAAAACGCCCCCGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTTGGCGTCGGCCCCATGCAATGGAGCAAAACTGTGGCCGCGTACGCTCAAGCCTATGCGAAAAAAAGAAAGGGTGACTCCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACCGGGGCAAATGCGGTGAAGTTATGGGCGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCTTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCATCTCCAAATTTTAAAAAATTAA

Protein sequence

MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRSSVRLGCARVPCKANSHLQILKN

Homology

[Close]

BLAST of CmaCh04G020300 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.0e-40
Identity = 80/129 (62.02%), Postives = 95/129 (73.64%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           +A FI TF  L+  + AQN+P DYL  HN AR QVGVGPM W   +AAYAQ YA +R GD
Sbjct: 8   VACFI-TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGD 67

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
             MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C+GG CGHYTQ+VWR+
Sbjct: 68  CGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRN 127

Query: 121 SVRLGCARV 130
           SVRLGCARV
Sbjct: 128 SVRLGCARV 134

[Close]

BLAST of CmaCh04G020300 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.1e-35
Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           + VF+A    L++ + AQ++P DYL +HN+AR  VGVGPMQW + VAAYA++YA++ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
             +IHS GPYGEN+A G   + +G +AV +W +EK  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPC 132
           SVRLGCA+V C
Sbjct: 130 SVRLGCAKVRC 138

[Close]

BLAST of CmaCh04G020300 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.3e-34
Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 2   AVFIATFMFLLVL--TNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKG 61
           ++F+A F+  ++   + AQ    ++L  HN AR +VGVGPM W   +AAYAQ YA +R  
Sbjct: 4   SIFVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRAD 63

Query: 62  DSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGE-CGHYTQMVW 121
           D  MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C  G+ CGHYTQ+VW
Sbjct: 64  DCGMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 123

Query: 122 RSSVRLGCARVPCKA 134
           R SVRLGCARV C +
Sbjct: 124 RKSVRLGCARVRCNS 137

[Close]

BLAST of CmaCh04G020300 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-33
Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 3   VFIATFMFLLVLTN---AQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKG 62
           + ++T +  LV+++   AQN+  DYL  HN ARA VGV P+ W   VAAYAQ YA +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 63  DSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGE-CGHYTQMVW 122
           D  ++HS G YGEN+A G     T A AV++W +EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 123 RSSVRLGCARVPCKANSHL 138
           R+SVR+GCARV C    ++
Sbjct: 133 RNSVRVGCARVQCNNGGYV 151

[Close]

BLAST of CmaCh04G020300 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.1e-33
Identity = 68/116 (58.62%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 17  AQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIAA 76
           AQN+P DYL +HN ARAQVGVGPM W   +A+ AQ YA  R GD  +IHS    GEN+A 
Sbjct: 24  AQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAK 83

Query: 77  GYYPEFTGANAVKLWANEKPLYDHASNKCLGGE-CGHYTQMVWRSSVRLGCARVPC 132
           G   +FTG  AV+LW +E+P Y++A+N+C+GG+ CGHYTQ+VWR+SVRLGC R  C
Sbjct: 84  G-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARC 136

[Close]

BLAST of CmaCh04G020300 vs. ExPASy TrEMBL
Match: A0A6J1I9K6 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470478 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.7e-73
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD
Sbjct: 9   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 68

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
           SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS
Sbjct: 69  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 128

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 129 SVRLGCARVPCKANSQFVV 147

[Close]

BLAST of CmaCh04G020300 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.3e-69
Identity = 126/139 (90.65%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           M  FIATF+FLL LTNAQNAPGDYLVLHNRARAQVGVGPMQWS TVAAYAQAYA+KRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            AMIHSTGPYGENIAAGYYPEFTGA+AVKLWANEKPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 129 SVRLGCARVPCKANSQFVV 147

[Close]

BLAST of CmaCh04G020300 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           M  FIATF+FLL LTNAQNAPGDYL LHNRARAQVGVGPMQWS TVAAYAQAYAKKRKGD
Sbjct: 40  MVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 99

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            AMIHSTGPYGENIAAGYYPEFTGA+AVKLW NEKPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 100 CAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRS 159

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 160 SVRLGCARVPCKANSQFVV 178

[Close]

BLAST of CmaCh04G020300 vs. ExPASy TrEMBL
Match: A0A6J1H381 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459977 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.6e-68
Identity = 124/139 (89.21%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           M  FIATF+FLL LTNAQNAPGDYL LHNRARAQVGVGPMQWS TVAAYAQAYAKKRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 68

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            AMIHSTGPYGENIAAGYYP+FTGA+AVKLW NEKPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPKFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 129 SVRLGCARVPCKANSQFVV 147

[Close]

BLAST of CmaCh04G020300 vs. ExPASy TrEMBL
Match: A0A6J1IEX8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111475711 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 123/139 (88.49%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MA F+ TF+FLL LT AQNAPGDYLVLHNRARA+VGVGPMQWS TVAAYAQAYA+KRKGD
Sbjct: 1   MAAFMVTFIFLLALTKAQNAPGDYLVLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGD 60

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            AMIHSTGPYGENIAAGYYPEFTGA+AVKLWANEKPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRS 120

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 121 SVRLGCARVPCKANSQFVV 139

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: XP_022971799.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 285.0 bits (728), Expect = 3.5e-73
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD
Sbjct: 9   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 68

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
           SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS
Sbjct: 69  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 128

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 129 SVRLGCARVPCKANSQFVV 147

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 8.8e-69
Identity = 126/139 (90.65%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           M  FIATF+FLL LTNAQNAPGDYLVLHNRARAQVGVGPMQWS TVAAYAQAYA+KRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            AMIHSTGPYGENIAAGYYPEFTGA+AVKLWANEKPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 129 SVRLGCARVPCKANSQFVV 147

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: XP_022958926.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68
Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           M  FIATF+FLL LTNAQNAPGDYL LHNRARAQVGVGPMQWS TVAAYAQAYAKKRKGD
Sbjct: 40  MVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 99

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            AMIHSTGPYGENIAAGYYPEFTGA+AVKLW NEKPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 100 CAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRS 159

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 160 SVRLGCARVPCKANSQFVV 178

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: XP_023522018.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 7.5e-68
Identity = 124/138 (89.86%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 2   AVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDS 61
           A F+ATF+FLLVLTNAQNAPGDYL LHNRARAQVGVGPMQWS TVA YAQAYA+KRKGD 
Sbjct: 10  AAFMATFIFLLVLTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDC 69

Query: 62  AMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRSS 121
           AMIHSTGPYGENIAAGYYPEFTGA+AVKLWANEKPLYDHASNKC+GGECGHYTQMVWRSS
Sbjct: 70  AMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSS 129

Query: 122 VRLGCARVPCKANSHLQI 140
           VRLGCARVPCKANS   +
Sbjct: 130 VRLGCARVPCKANSQFVV 147

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: XP_022958826.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 7.5e-68
Identity = 124/139 (89.21%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           M  FIATF+FLL LTNAQNAPGDYL LHNRARAQVGVGPMQWS TVAAYAQAYAKKRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 68

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            AMIHSTGPYGENIAAGYYP+FTGA+AVKLW NEKPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPKFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARVPCKANS   +
Sbjct: 129 SVRLGCARVPCKANSQFVV 147

[Close]

BLAST of CmaCh04G020300 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-37
Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 5   IATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMI 64
           I    FL+V TNAQN P DYL  HN ARAQVGV  + W  T+AAYA  Y+  RK D  ++
Sbjct: 11  IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 65  HSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGG-ECGHYTQMVWRSSVR 124
           HS GPYGEN+A G    F+  +AVKLW +EKP Y +A N C GG +C HYTQ+VWR SV+
Sbjct: 71  HSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVK 130

Query: 125 LGCARVPC 132
           +GCARV C
Sbjct: 131 IGCARVQC 138

[Close]

BLAST of CmaCh04G020300 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 148.7 bits (374), Expect = 3.6e-36
Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           + VF+A    L++ + AQ++P DYL +HN+AR  VGVGPMQW + VAAYA++YA++ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
             +IHS GPYGEN+A G   + +G +AV +W +EK  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPC 132
           SVRLGCA+V C
Sbjct: 130 SVRLGCAKVRC 138

[Close]

BLAST of CmaCh04G020300 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 8.9e-35
Identity = 71/128 (55.47%), Postives = 92/128 (71.88%), Query Frame = 0


Query: 5   IATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMI 64
           I  F+ L+V   AQ++P D+L +HNRARA+VGVGP++W + VAAYA+ YA +RKGD AM 
Sbjct: 14  ITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMK 73

Query: 65  HSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCL-GGECGHYTQMVWRSSVR 124
           HS+G YGENIA       TG  AV +W +E+  YD+ SN C    +CGHYTQ+VWR+S R
Sbjct: 74  HSSGSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSER 133

Query: 125 LGCARVPC 132
           LGCA+V C
Sbjct: 134 LGCAKVRC 140

[Close]

BLAST of CmaCh04G020300 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-34
Identity = 68/126 (53.97%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 16  NAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIA 75
           N    P + LV+HN+ARA VGVGPM W++T+A YAQ+YA +R  D AM HS GP+GEN+A
Sbjct: 37  NGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLA 96

Query: 76  AGYYPEFTGANAVKLWANEKPLYDHASNKCLG-GECGHYTQMVWRSSVRLGCARVPCKAN 135
           AG +   +G  A + W  EK  YD+ SN C G G CGHYTQ+VWR SVRLGCA V CK +
Sbjct: 97  AG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKND 156

Query: 136 SHLQIL 141
            ++ ++
Sbjct: 157 EYIWVI 161

[Close]

BLAST of CmaCh04G020300 vs. TAIR 10
Match: AT1G50050.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 7.5e-34
Identity = 71/131 (54.20%), Postives = 87/131 (66.41%), Query Frame = 0


Query: 3   VFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSA 62
           + I    FL++ TNAQNA  DYL  HN ARAQVGV  + W   VAAYA  YA  RK D +
Sbjct: 9   LIIVAISFLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCS 68

Query: 63  MIHST-GPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGG-ECGHYTQMVWRS 122
           +  ST G YGEN+A G    FTG  AV LW NEKP Y++ +N C+G  +C HYTQ+VW +
Sbjct: 69  LTPSTGGSYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSN 128

Query: 123 SVRLGCARVPC 132
           SV++GCARV C
Sbjct: 129 SVKIGCARVLC 139

The following BLAST results are available for this feature:

BLAST of CmaCh04G020300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	9.0e-40	62.02	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	5.1e-35	53.44	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q08697	4.3e-34	52.59	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P08299	3.6e-33	49.64	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q04108	8.1e-33	58.62	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of CmaCh04G020300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I9K6	1.7e-73	97.12	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EQJ7	4.3e-69	90.65	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H3H8	1.2e-68	89.93	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H381	3.6e-68	89.21	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IEX8	1.1e-67	88.49	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmaCh04G020300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971799.1	3.5e-73	97.12	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_022930064.1	8.8e-69	90.65	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_022958926.1	2.6e-68	89.93	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023522018.1	7.5e-68	89.86	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958826.1	7.5e-68	89.21	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]

BLAST of CmaCh04G020300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	1.1e-37	57.03	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	3.6e-36	53.44	pathogenesis-related gene 1	[more]
AT4G33720.1	8.9e-35	55.47	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	2.0e-34	53.97	pathogenesis-related protein-1-like	[more]
AT1G50050.1	7.5e-34	54.20	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 40..58 score: 36.51 coord: 110..126 score: 63.28 coord: 87..100 score: 38.5
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 13..134
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 40..58 score: 27.3 coord: 109..128 score: 49.69 coord: 85..100 score: 31.25
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 19..142 e-value: 1.4E-38 score: 144.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 27..135 e-value: 3.9E-20 score: 73.0
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 21..140 e-value: 5.9E-32 score: 112.8
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 12..135
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 13..134
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 111..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020300.1	CmaCh04G020300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane