CmaCh04G020250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	pathogenesis-related gene 1
Location	Cma_Chr04: 12848095 .. 12850466 (+)
RNA-Seq Expression	CmaCh04G020250
Synteny	CmaCh04G020250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCAAGCTTCACAATCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCTTGCAAGGCTGATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGAAGAGATTTGGTTTTAAAATTTTTATGAATATTAATAAAGTTTGTGAGAGAATCATGAATTTATTTATTGAAATAAAACTACGATATTGTCTACAATAGTATTATATTGTCTAGAGCATAAACTCTTGTTGCTGTGTTTTGACTTCCTTACTTATAAACTCATGATCATAGAGTCTCCCCTCTCATTAAGTACACCACATAGAGCCACATTTGAAGCCTATAGATTACCTATGATCATAGAGACTCCCCTCGAACAAAATACACCATAGAGCCTCCCTCGAACAAAATACACCATTGTGCCTCCCCTTAAGTCGATGGATTTCTAAAAGAAACTCCCTTTAATCGAGACTCGACTTCTTTCTTCGGAGACCTTGAACAAAATAAGAAATTTGTTCGACACTTTTAACTACGATTTTTAGGCTTACAACTTTTTTGTTCGACATACCTAAGTTAAGTTCATAGTTTGATACCATGTAACTAATCACGAATCTCGATAATGTTATATGATATTTGTCAACTTTGAACATAATATCATGGGTTTGCTTCGAGCTCCCACAAGAAGTCATGTTAATGAAAATGTATTCTTTAGTTATAAATCTATGATCATTTCCGAACAGTCTTCAACACTGAGAGCATCAGCCACCAGCCAATTGTTGTTCCAAGTCACCCGGAAGAAATGCCCTCGGCGGAGATGCGGAAAACCAGTTTAAGGTGTTTTCAGCCTCCAAATCGAGAGAACCACGACGACGGCGATTAACTCCGCTGCAGTATGATACCCACACAGGAGACGAAGACTCACTGCCACAACCTACCGCCGTTTACAAGCTCTGAATATGGAGACCAACGGGGCCGGAGTGACTAAAGGACACCCGACGCTCAAAAGGCGACCATTTTTTTTCGTACTTTACTTATTGGCACTCCATTCGTCTTTTTCTCGGCTTCGTGGGAAAAAAAACAATAATAATAAATAATAAAAATGGTAAAATCAAAGAAATGCCTGTTTTTGTTGAATTACTTAAATTCCCTTTTATCGAAATACTAAAATACTGAAATTTGATAGGTACTGTGATCATTGGGCAATGCTCATGGAAAACTTCTTTAGTACTGGGTTTGGTGGAGAATGTGATTCCTGCACCAATATGACACATTGTTTTAACCGATACCAAGAAGAAGCACATTGATGATCATAAATTGAAAGATTTCAAAGCAAAGAATTATCTATTTCAAGCATTAGAACGTTCGATCTTGGAGACAACCCTCAACAAGGATACAGAAACTCAATTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAAGATAGAGATCTGTTGATCAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAGATCAACCAGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAAACCTTTAAAGCTCGTCTTGTAGAAAAGGGTTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCGATTAGAATACTCTTGTCTATTGCCACATTTTATGGTTATGAAATTTGGCAAATGGATGTCAAGATAGTCTTTCTAAAGGGCAATCTTGAAGAGAGTATCTATATTGCTCAACCAGATGGGTTCATTAAACAAGATCACAAGCATAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACCGCGATCAAATCTTATGGCTCGAAACAGAATGTTGACGAACCTTGTGTTTATAAAGGATAG

mRNA sequence

ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCAAGCTTCACAATCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCTTGCAAGGCTGATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGAAGAAGCACATTGATGATCATAAATTGAAAGATTTCAAAGCAAAGAATTATCTATTTCAAGCATTAGAACGTTCGATCTTGGAGACAACCCTCAACAAGGATACAGAAACTCAATTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAAGATAGAGATCTGTTGATCAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAGATCAACCAGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAAACCTTTAAAGCTCGTCTTGTAGAAAAGGGTTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCGATTAGAATACTCTTGTCTATTGCCACATTTTATGGTTATGAAATTTGGCAAATGGATGTCAAGATAGTCTTTCTAAAGGGCAATCTTGAAGAGAGTATCTATATTGCTCAACCAGATGGGTTCATTAAACAAGATCACAAGCATAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACCGCGATCAAATCTTATGGCTCGAAACAGAATGTTGACGAACCTTGTGTTTATAAAGGATAG

Coding sequence (CDS)

ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCAAGCTTCACAATCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCTTGCAAGGCTGATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGAAGAAGCACATTGATGATCATAAATTGAAAGATTTCAAAGCAAAGAATTATCTATTTCAAGCATTAGAACGTTCGATCTTGGAGACAACCCTCAACAAGGATACAGAAACTCAATTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAAGATAGAGATCTGTTGATCAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAGATCAACCAGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAAACCTTTAAAGCTCGTCTTGTAGAAAAGGGTTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCGATTAGAATACTCTTGTCTATTGCCACATTTTATGGTTATGAAATTTGGCAAATGGATGTCAAGATAGTCTTTCTAAAGGGCAATCTTGAAGAGAGTATCTATATTGCTCAACCAGATGGGTTCATTAAACAAGATCACAAGCATAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACCGCGATCAAATCTTATGGCTCGAAACAGAATGTTGACGAACCTTGTGTTTATAAAGGATAG

Protein sequence

MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWVKKHIDDHKLKDFKAKNYLFQALERSILETTLNKDTETQFIIPDDGVEDPLTYKQAMNDEDRDLLIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVEKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYGYEIWQMDVKIVFLKGNLEESIYIAQPDGFIKQDHKHRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGSKQNVDEPCVYKG

Homology

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BLAST of CmaCh04G020250 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-52
Identity = 95/166 (57.23%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 6   LRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKR 65
           L  + A  +TF  L+  +KAQN+P DYL  HN AR +VGVGPM W N +AAYAQ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMV 125
            GDC MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN CVGG CGHYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 126 WRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWVKKHID 172
           WR+SVRLGCARV       F+ CNYDPPGN+IG++P+    ++  D
Sbjct: 124 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPFGDLEEQPFD 168

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BLAST of CmaCh04G020250 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.7e-46
Identity = 84/155 (54.19%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 12  FMVTFIFLLAL----TKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 71
           F++ F+ L+      +KAQ++P DYL++HN+AR  VGVGPMQW   VAAYA++YAE+ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 72  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWR 131
           +C +IHS GPYGEN+A G   + +G  AV +W +EK  Y++A+N C  G CGHYTQ+VWR
Sbjct: 69  NCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWR 128

Query: 132 SSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPY 163
            SVRLGCA+V C      + CNYDP GNY+ EKPY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

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BLAST of CmaCh04G020250 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 93/209 (44.50%), Postives = 137/209 (65.55%), Query Frame = 0


Query: 189 ERSILETTLNKDTETQFIIPDDGVEDPLTYKQAMNDEDRDLLIKAMNLEMESMYFNSVWE 248
           ER  +E+     TE   +I DD   +P + K+ ++  +++ L+KAM  EMES+  N  ++
Sbjct: 788 ERPRVESRRYPSTE-YVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYK 847

Query: 249 LVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVEKGYTQREGVDYEETFSPVAMLKSI 308
           LV+ P G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D++E FSPV  + SI
Sbjct: 848 LVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSI 907

Query: 309 RILLSIATFYGYEIWQMDVKIVFLKGNLEESIYIAQPDGFIKQDHKHRVCKLKRSIYGLK 368
           R +LS+A     E+ Q+DVK  FL G+LEE IY+ QP+GF     KH VCKL +S+YGLK
Sbjct: 908 RTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLK 967

Query: 369 QASRSWNIKFDTAIKSYGSKQNVDEPCVY 398
           QA R W +KFD+ +KS    +   +PCVY
Sbjct: 968 QAPRQWYMKFDSFMKSQTYLKTYSDPCVY 993

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BLAST of CmaCh04G020250 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.4e-44
Identity = 82/156 (52.56%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 8   IMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 67
           ++ + ++ F+ +    +AQN+  DYL  HN ARA+VGV P+ W + VAAYAQ YA +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 68  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 127
           DC ++HS G YGEN+A G     T A AV++W +EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 128 RSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPY 163
           R+SVR+GCARV C      V CNYDPPGNY GE PY
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

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BLAST of CmaCh04G020250 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.6e-44
Identity = 90/170 (52.94%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 8   IMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 67
           I  A  +TFI +   ++AQ    ++L  HN AR  VGVGPM W + +AAYAQ YA +R  
Sbjct: 5   IFVACFITFI-IFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRAD 64

Query: 68  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 127
           DC MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C  G+ CGHYTQ+VW
Sbjct: 65  DCGMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 124

Query: 128 RSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWVKKHIDDHKLK 177
           R SVRLGCARV C +   F+ CNYDPPGNYI     D   +K   D KL+
Sbjct: 125 RKSVRLGCARVRCNSGWVFITCNYDPPGNYIDNVYGDLEEQKPDFDSKLE 172

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BLAST of CmaCh04G020250 vs. ExPASy TrEMBL
Match: A0A6J1IF26 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472193 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 3.4e-95
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020250 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020250 vs. ExPASy TrEMBL
Match: A0A6J1ICC8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474223 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020250 vs. ExPASy TrEMBL
Match: A0A6J1IEK2 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473362 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020250 vs. ExPASy TrEMBL
Match: A0A6J1IC05 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473363 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIA GYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

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BLAST of CmaCh04G020250 vs. NCBI nr
Match: XP_022973609.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 358.6 bits (919), Expect = 6.9e-95
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020250 vs. NCBI nr
Match: XP_022971803.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971804.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971806.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974680.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974686.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974689.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974690.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975182.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975183.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 354.4 bits (908), Expect = 1.3e-93
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020250 vs. NCBI nr
Match: XP_022971801.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971802.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974677.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974684.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974688.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975326.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975679.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 354.4 bits (908), Expect = 1.3e-93
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020250 vs. NCBI nr
Match: XP_022974675.1 (basic form of pathogenesis-related protein 1-like, partial [Cucurbita maxima])

HSP 1 Score: 354.4 bits (908), Expect = 1.3e-93
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020250 vs. NCBI nr
Match: XP_022974676.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 352.8 bits (904), Expect = 3.8e-93
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYL LHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIA GYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCARVPCKA+SQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020250 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 186.8 bits (473), Expect = 3.4e-47
Identity = 84/155 (54.19%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 12  FMVTFIFLLAL----TKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 71
           F++ F+ L+      +KAQ++P DYL++HN+AR  VGVGPMQW   VAAYA++YAE+ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 72  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWR 131
           +C +IHS GPYGEN+A G   + +G  AV +W +EK  Y++A+N C  G CGHYTQ+VWR
Sbjct: 69  NCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWR 128

Query: 132 SSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPY 163
            SVRLGCA+V C      + CNYDP GNY+ EKPY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmaCh04G020250 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-46
Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 0


Query: 16  FIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHST 75
           F+ L+   KAQ++P D+L +HNRARAEVGVGP++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76  GPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCV-GGECGHYTQMVWRSSVRLGC 135
           G YGENIA       TG  AV +W +E+  YD+ SN C    +CGHYTQ+VWR+S RLGC
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 136

Query: 136 ARVPCKADSQFVVCNYDPPGNYIGEKPY 163
           A+V C     F+ CNYDPPGN++GE PY
Sbjct: 137 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmaCh04G020250 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 3.7e-46
Identity = 83/151 (54.97%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 13  MVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72
           +V   FL+  T AQN P DYL  HN ARA+VGV  + W  T+AAYA  Y+  RK DC ++
Sbjct: 11  IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVWRSSVR 132
           HS GPYGEN+A G    F+   AVKLW +EKP Y +A N C GG +C HYTQ+VWR SV+
Sbjct: 71  HSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVK 130

Query: 133 LGCARVPCKADSQFVVCNYDPPGNYIGEKPY 163
           +GCARV C     FV CNY+ PGN++GE PY
Sbjct: 131 IGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmaCh04G020250 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-44
Identity = 82/161 (50.93%), Postives = 111/161 (68.94%), Query Frame = 0


Query: 2   WTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAY 61
           +++ L I+AA +   +  L   KAQ++  DY+  HN+AR+++GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62  AEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHY 121
           A + KGDC ++HS GPYGEN+A     + +G  AV LW NEK  Y++ +N C  G CGHY
Sbjct: 66  ANQLKGDCRLVHSRGPYGENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 125

Query: 122 TQMVWRSSVRLGCARVPCKADSQFVVCNYDPPGNYIGEKPY 163
           TQ+VWR+SVRLGCA+V C      + CNYDPPGNY  +KPY
Sbjct: 126 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmaCh04G020250 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-43
Identity = 81/136 (59.56%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 29  PGDYLKLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYP 88
           P + L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DCAM HS GP+GEN+AAG + 
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAG-WG 101

Query: 89  EFTGADAVKLWANEKPLYDHASNKCVG-GECGHYTQMVWRSSVRLGCARVPCKADSQ-FV 148
             +G  A + W  EK  YD+ SN C G G CGHYTQ+VWR SVRLGCA V CK D   +V
Sbjct: 102 TMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 149 VCNYDPPGNYIGEKPY 163
           +C+YDPPGNYIG++PY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

The following BLAST results are available for this feature:

BLAST of CmaCh04G020250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	1.5e-52	57.23	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	4.7e-46	54.19	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
P10978	1.1e-45	44.50	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P08299	3.4e-44	52.56	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q08697	7.6e-44	52.94	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of CmaCh04G020250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IF26	3.4e-95	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1I475	6.3e-94	98.80	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1ICC8	6.3e-94	98.80	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IEK2	6.3e-94	98.80	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IC05	1.8e-93	98.19	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmaCh04G020250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973609.1	6.9e-95	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_022971803.1	1.3e-93	98.80	basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718...	[more]
XP_022971801.1	1.3e-93	98.80	basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718...	[more]
XP_022974675.1	1.3e-93	98.80	basic form of pathogenesis-related protein 1-like, partial [Cucurbita maxima]	[more]
XP_022974676.1	3.8e-93	98.19	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]

BLAST of CmaCh04G020250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14610.1	3.4e-47	54.19	pathogenesis-related gene 1	[more]
AT4G33720.1	1.3e-46	57.43	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50060.1	3.7e-46	54.97	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	2.7e-44	50.93	basic pathogenesis-related protein 1	[more]
AT2G19990.1	1.3e-43	59.56	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 95..108 score: 38.5 coord: 145..158 score: 58.05 coord: 48..66 score: 36.79 coord: 118..134 score: 63.28
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 19..162
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 117..136 score: 49.69 coord: 48..66 score: 27.63 coord: 93..108 score: 30.47
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..158 e-value: 3.9E-60 score: 215.8
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..150 e-value: 1.4E-22 score: 80.9
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 244..394 e-value: 1.2E-47 score: 162.6
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 23..169 e-value: 3.2E-44 score: 152.7
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 30..163
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 19..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 29..162 e-value: 5.54329E-87 score: 258.333
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020250.1	CmaCh04G020250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding