Homology
BLAST of CmaCh04G020240 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 8.3e-21
Identity = 55/133 (41.35%), Postives = 79/133 (59.40%), Query Frame = 0
Query: 223 DSRKSTSGSVFTLNEGAIIWRSIKQGCISDSTMEAEYVAACEAAKESVWLRKFLTYLEVV 282
D+RKS++G +FT + GAI W+S Q C++ ST EAEY+AA E KE +WL++FL L +
Sbjct: 1188 DNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH 1247
Query: 283 PNMHLPVTLYCDKSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIVSEHNIV 342
++ +YCD A+ SK H R KHI+ +YH IRE+V + V +I + N
Sbjct: 1248 QKEYV---VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPA 1307
Query: 343 DPFTKPLTAKVFE 356
D TK + FE
Sbjct: 1308 DMLTKVVPRNKFE 1317
HSP 2 Score: 72.8 bits (177), Expect = 9.1e-12
Identity = 73/276 (26.45%), Postives = 118/276 (42.75%), Query Frame = 0
Query: 2 VRSMMSFAQLPDPFWGYAVETATYILNMVPTKSV-LETLYELWKWRK------------- 61
VRSM+ A+LP FWG AV+TA Y++N P+ + E +W ++
Sbjct: 596 VRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRA 655
Query: 62 ----------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQP 121
GY E G +D + +V S + F E VR
Sbjct: 656 FAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAAD 715
Query: 122 CSKLILSEI------------SKEATDNTTTVVDQAG--PSTRVVDGDD----TSGQSHP 181
S+ + + I + + ++TT V + G P + G+ HP
Sbjct: 716 MSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHP 775
Query: 182 S--EELTTP-RHSGRVITQPDRYLGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAM 221
+ EE P R S R + RY + V+I DD ++L K+ ++ +++Q +KAM
Sbjct: 776 TQGEEQHQPLRRSERPRVESRRYP--STEYVLISDDREPESL--KEVLSHPEKNQLMKAM 835
BLAST of CmaCh04G020240 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19
Identity = 53/140 (37.86%), Postives = 81/140 (57.86%), Query Frame = 0
Query: 225 RKSTSGSVFTLNE-GAIIWRSIKQGCISDSTMEAEYVAACEAAKESVWLRKFLTYLEVVP 284
RKST+G +F + + I W + +Q ++ S+ EAEY+A EA +E++WL+ LT + +
Sbjct: 1263 RKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI-- 1322
Query: 285 NMHLPVTLYCDKSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIVSEHNIVD 344
+ P+ +Y D G ++ + P HKR KHI+ KYH RE VQ + + I +E+ + D
Sbjct: 1323 KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLAD 1382
Query: 345 PFTKPLTAKVFEGHLVSLGL 364
FTKPL A F LGL
Sbjct: 1383 IFTKPLPAARFVELRDKLGL 1400
BLAST of CmaCh04G020240 vs. ExPASy Swiss-Prot
Match:
P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 1.5e-06
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query: 223 DSRKSTSGSVFTLNEGAIIWRSIKQGCISDSTMEAEYVAACEAAKESVWL 273
+SR+STSG +F LN G + WRS KQ ++ S+ E EY+A EA +E+VWL
Sbjct: 84 ESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWL 133
BLAST of CmaCh04G020240 vs. ExPASy TrEMBL
Match:
A0A5D3BUN8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00360 PE=4 SV=1)
HSP 1 Score: 494.2 bits (1271), Expect = 4.7e-136
Identity = 291/584 (49.83%), Postives = 321/584 (54.97%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MVRSMMS+AQLP FWGYAVETA +ILN VP+KSV ET +ELW+ RK
Sbjct: 395 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+GGLF+D QENRVFVSTNATFLEEDH+RNH+P S
Sbjct: 455 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+LS EATD +T VVD+ GPS+R VD TSGQSHPS+ L PR SGRV++QP+RY
Sbjct: 515 KLVLS----EATDESTRVVDEVGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRY 574
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDGVED L+YKQAMND D+DQW+KAM+LEM SMYF SVWELV+ P+GVK
Sbjct: 575 LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 634
Query: 241 PISCKWIYKRKRDQT--------------------------------------------- 300
PI CKWIYKRKRD
Sbjct: 635 PIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATF 694
Query: 301 ------------------------------------------------------------ 360
Sbjct: 695 YDYEIWQMDVKTAFLNGNLEESIFMSQPERFITQGQEQKVCKLNLSIYGLKQASRSWNIR 754
Query: 361 ------------------------------------------------------------ 367
Sbjct: 755 HGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRRTRYYMLV 814
BLAST of CmaCh04G020240 vs. ExPASy TrEMBL
Match:
A0A5A7U616 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00870 PE=4 SV=1)
HSP 1 Score: 446.4 bits (1147), Expect = 1.1e-121
Identity = 268/598 (44.82%), Postives = 307/598 (51.34%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MV SMMS+AQLP FWGYAVETA +ILN VP+KSV + +ELW+ RK
Sbjct: 131 MVHSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSKIPFELWRGRKPSLSHFRIWGCPA 190
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+G LF+DLQENRVFVSTNATFLEEDH+R+H+P S
Sbjct: 191 HVLVTNPKKLEPRSRLCQFVGYPKETRGDLFFDLQENRVFVSTNATFLEEDHMRDHKPRS 250
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+L+ EAT+ +T VVD+ GPS+R VD TSGQ HP + L PR SG++++Q +RY
Sbjct: 251 KLVLN----EATNESTRVVDEVGPSSR-VDETSTSGQFHPFQSLRMPRRSGKIVSQSNRY 310
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDGVED L+YKQAMND D+DQW+KAM+LEM SMYF SVWELV+ P GVK
Sbjct: 311 LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPKGVK 370
Query: 241 PISCKWIYKRKRDQTDS------------------------------------------- 300
I CKWIY RKRD T
Sbjct: 371 HIGCKWIYNRKRDSTGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILMSIATF 430
Query: 301 ------------------------------------------------------------ 360
Sbjct: 431 YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQAFLVLYVDDILLIGNDVGYLTDVKAW 490
Query: 361 ------------------------------------------------------------ 367
Sbjct: 491 LAAQFQMKDLGEAQYVLGIQSVRDHKNKTLALSQATYIDKMLVRYLMQNSKKDLLPFKHG 550
BLAST of CmaCh04G020240 vs. ExPASy TrEMBL
Match:
A0A5A7UGR3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00750 PE=4 SV=1)
HSP 1 Score: 440.7 bits (1132), Expect = 6.2e-120
Identity = 248/452 (54.87%), Postives = 288/452 (63.72%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MVRSMM+FAQLPD FWGYA+ETA YILN VP+K+V ET YELWK RK
Sbjct: 1 MVRSMMTFAQLPDSFWGYALETAIYILNNVPSKTVSETPYELWKGRKGSLRYFRIWGCPA 60
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKE+KG LFYD QEN+VFVSTNA FLEEDH+RNHQ CS
Sbjct: 61 HVLVQNPKKLEHHSKLCLFVGYPKESKGVLFYDPQENKVFVSTNAPFLEEDHIRNHQACS 120
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+L EIS AT+ ++ ST+V+D GQ+HPS+EL P SGRV+ Q DRY
Sbjct: 121 KLVLEEISNNATNRPSS-------STKVIDKTRNIGQTHPSQELREPCRSGRVVRQLDRY 180
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG +E Q+IIPDDG+ED LTYKQAMND D DQWIKAMNLEM SMY SV LV+QP V+
Sbjct: 181 LGLSEAQIIIPDDGIEDPLTYKQAMNDVDCDQWIKAMNLEMESMYSNSVRYLVDQPSEVR 240
Query: 241 PISCKWIYKRKRDQTDSRKSTSGSV----FTLNEG----------AII------------ 300
PI CKWIYKRKRDQ ++ + +T EG A+I
Sbjct: 241 PIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETLSPVAMIKLIRILLSIATF 300
Query: 301 --WRSIKQGCISD---------------------------STMEAEYVAACEAAKESVWL 360
+ + GC + + +EAEYVAACEAAKE+VWL
Sbjct: 301 YDYEILADGCQDNFFKRCYKVYIRISFHFERRSSSMEKHKTILEAEYVAACEAAKEAVWL 360
Query: 361 RKFLTYLEVVPNMHLPVTLYCDKSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIV 365
+KFLT LEVVPNMHLP+TLYC+ SGAVANS+EPR HKRGKHI RKY LIR+IV RGDVIV
Sbjct: 361 KKFLTDLEVVPNMHLPITLYCENSGAVANSREPRRHKRGKHIARKYTLIRKIVHRGDVIV 420
BLAST of CmaCh04G020240 vs. ExPASy TrEMBL
Match:
A0A5D3DS50 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001740 PE=4 SV=1)
HSP 1 Score: 435.6 bits (1119), Expect = 2.0e-118
Identity = 273/652 (41.87%), Postives = 311/652 (47.70%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MVRSMMS+AQLP FWGYAV+TA +ILN VP+KSV ET +ELW+ RK
Sbjct: 180 MVRSMMSYAQLPSSFWGYAVKTAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 239
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+GGLF+D QENRVF+ TNATFLEEDH+R+H+P S
Sbjct: 240 HVLVTNPKKLEPRSRLCQFIGYPKETRGGLFFDPQENRVFILTNATFLEEDHMRDHKPQS 299
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+L+ EATD +T VVD+ GPS+R VD TSGQSHPS+ L PR SGR ++QP+ Y
Sbjct: 300 KLVLN----EATDGSTRVVDEVGPSSR-VDETTTSGQSHPSQSLRMPRRSGRTVSQPNCY 359
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDG ED L+YKQA ND D+DQW+KAM+L+M SMYF S+WELV+ P+GVK
Sbjct: 360 LGLTETQVVIPDDGAEDPLSYKQATNDVDKDQWVKAMDLKMESMYFNSMWELVDLPEGVK 419
Query: 241 PISCKWIYKRKRDQT--------------------------------------------- 300
PI CKWIYKRK+D
Sbjct: 420 PIGCKWIYKRKKDSAGKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFI 479
Query: 301 ------------------------------------------------------------ 360
Sbjct: 480 TQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLV 539
Query: 361 ------------------------------------------------------------ 367
Sbjct: 540 LYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYI 599
BLAST of CmaCh04G020240 vs. ExPASy TrEMBL
Match:
A0A5A7UL66 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G002390 PE=4 SV=1)
HSP 1 Score: 434.9 bits (1117), Expect = 3.4e-118
Identity = 242/454 (53.30%), Postives = 280/454 (61.67%), Query Frame = 0
Query: 17 GYAVETATYILNMVPTKSVLETLYELWKWRKGYPKETKGGLFYDLQENRVFVSTNATFLE 76
GYA+E A YILN V +KSV +T YELWK RKGYPKE+KGGLFYD QEN+VFVSTNATFLE
Sbjct: 189 GYALEIAIYILNNVLSKSVSKTPYELWKGRKGYPKESKGGLFYDAQENKVFVSTNATFLE 248
Query: 77 EDHVRNHQPCSKLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRH 136
EDH+RNHQ SKL+L EISK TD ++ ST++VD GQ+HPS+EL PR
Sbjct: 249 EDHIRNHQTRSKLVLEEISKNTTDRPSS-------STKIVDKTRNIGQTHPSQELGEPRR 308
Query: 137 SGRVITQPDRYLGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSV 196
SGRV Q DRYL +E Q+IIPDDG+ED LTYKQAMND D DQWIKAM+LEM SMY SV
Sbjct: 309 SGRVGRQSDRYLDLSEAQIIIPDDGIEDPLTYKQAMNDVDCDQWIKAMDLEMESMYSNSV 368
Query: 197 WELVEQPDGVKP-----------------ISCKWIYKRKRDQ------------------ 256
W LV +K + ++IY++ Q
Sbjct: 369 WTLVGHLTDIKKWLATQFQMKDLGNAQHVLDMEFIYQKNHVQRHLKKLEDISNIPYAFVF 428
Query: 257 ------------------------------------------------------------ 316
Sbjct: 429 GSLMYAMLCTRPDACYSVGMVSRYQSNPGRDHWTAVKNILKYLRRIKDYMLVYGSKDLIL 488
Query: 317 -----------TDSRKSTSGSVFTLNEGAIIWRSIKQGCISDSTMEAEYVAACEAAKESV 365
D+RKSTSGSVFTLNEGA++WRSIKQ I DSTMEAEYVAAC+AAKE+V
Sbjct: 489 TGYTDSDFQTDKDARKSTSGSVFTLNEGAVVWRSIKQSYIVDSTMEAEYVAACKAAKEAV 548
BLAST of CmaCh04G020240 vs. NCBI nr
Match:
TYK02840.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 494.2 bits (1271), Expect = 9.7e-136
Identity = 291/584 (49.83%), Postives = 321/584 (54.97%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MVRSMMS+AQLP FWGYAVETA +ILN VP+KSV ET +ELW+ RK
Sbjct: 395 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+GGLF+D QENRVFVSTNATFLEEDH+RNH+P S
Sbjct: 455 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+LS EATD +T VVD+ GPS+R VD TSGQSHPS+ L PR SGRV++QP+RY
Sbjct: 515 KLVLS----EATDESTRVVDEVGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRY 574
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDGVED L+YKQAMND D+DQW+KAM+LEM SMYF SVWELV+ P+GVK
Sbjct: 575 LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 634
Query: 241 PISCKWIYKRKRDQT--------------------------------------------- 300
PI CKWIYKRKRD
Sbjct: 635 PIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATF 694
Query: 301 ------------------------------------------------------------ 360
Sbjct: 695 YDYEIWQMDVKTAFLNGNLEESIFMSQPERFITQGQEQKVCKLNLSIYGLKQASRSWNIR 754
Query: 361 ------------------------------------------------------------ 367
Sbjct: 755 HGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRRTRYYMLV 814
BLAST of CmaCh04G020240 vs. NCBI nr
Match:
KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 447.6 bits (1150), Expect = 1.0e-121
Identity = 292/717 (40.73%), Postives = 323/717 (45.05%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MVRSMMS+AQLP FWGYAVETA +ILN VP+KSV ET +ELW+ RK
Sbjct: 521 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+GGLF+D QENRVFVSTNATFLEEDH+RNH+P S
Sbjct: 581 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 640
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+LS EATD +T VVD+ GPS+R VD TSGQSHPS+ L PR SGRV++QP+RY
Sbjct: 641 KLVLS----EATDESTRVVDEVGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRY 700
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDGVED L+YKQAMND D+DQW+KAM+LEM SMYF SVWELV+ P+GVK
Sbjct: 701 LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 760
Query: 241 PISCKWIYKRKRDQT--------------------------------------------- 300
PI CKWIYKRKRD
Sbjct: 761 PIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATF 820
Query: 301 ------------------------------------------------------------ 360
Sbjct: 821 YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIR 880
Query: 361 ------------------------------------------------------------ 367
Sbjct: 881 FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 940
BLAST of CmaCh04G020240 vs. NCBI nr
Match:
KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 447.6 bits (1150), Expect = 1.0e-121
Identity = 292/717 (40.73%), Postives = 323/717 (45.05%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MVRSMMS+AQLP FWGYAVETA +ILN VP+KSV ET +ELW+ RK
Sbjct: 395 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+GGLF+D QENRVFVSTNATFLEEDH+RNH+P S
Sbjct: 455 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+LS EATD +T VVD+ GPS+R VD TSGQSHPS+ L PR SGRV++QP+RY
Sbjct: 515 KLVLS----EATDESTRVVDEVGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRY 574
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDGVED L+YKQAMND D+DQW+KAM+LEM SMYF SVWELV+ P+GVK
Sbjct: 575 LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 634
Query: 241 PISCKWIYKRKRDQT--------------------------------------------- 300
PI CKWIYKRKRD
Sbjct: 635 PIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATF 694
Query: 301 ------------------------------------------------------------ 360
Sbjct: 695 YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIR 754
Query: 361 ------------------------------------------------------------ 367
Sbjct: 755 FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 814
BLAST of CmaCh04G020240 vs. NCBI nr
Match:
KAA0049626.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 446.4 bits (1147), Expect = 2.3e-121
Identity = 268/598 (44.82%), Postives = 307/598 (51.34%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MV SMMS+AQLP FWGYAVETA +ILN VP+KSV + +ELW+ RK
Sbjct: 131 MVHSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSKIPFELWRGRKPSLSHFRIWGCPA 190
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+G LF+DLQENRVFVSTNATFLEEDH+R+H+P S
Sbjct: 191 HVLVTNPKKLEPRSRLCQFVGYPKETRGDLFFDLQENRVFVSTNATFLEEDHMRDHKPRS 250
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+L+ EAT+ +T VVD+ GPS+R VD TSGQ HP + L PR SG++++Q +RY
Sbjct: 251 KLVLN----EATNESTRVVDEVGPSSR-VDETSTSGQFHPFQSLRMPRRSGKIVSQSNRY 310
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDGVED L+YKQAMND D+DQW+KAM+LEM SMYF SVWELV+ P GVK
Sbjct: 311 LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPKGVK 370
Query: 241 PISCKWIYKRKRDQTDS------------------------------------------- 300
I CKWIY RKRD T
Sbjct: 371 HIGCKWIYNRKRDSTGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILMSIATF 430
Query: 301 ------------------------------------------------------------ 360
Sbjct: 431 YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQAFLVLYVDDILLIGNDVGYLTDVKAW 490
Query: 361 ------------------------------------------------------------ 367
Sbjct: 491 LAAQFQMKDLGEAQYVLGIQSVRDHKNKTLALSQATYIDKMLVRYLMQNSKKDLLPFKHG 550
BLAST of CmaCh04G020240 vs. NCBI nr
Match:
KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 441.8 bits (1135), Expect = 5.7e-120
Identity = 289/717 (40.31%), Postives = 322/717 (44.91%), Query Frame = 0
Query: 1 MVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETLYELWKWRK------------- 60
MVRSMMS+AQLP FWGYAVETA +ILN VP+KSV ET +ELW+ RK
Sbjct: 521 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580
Query: 61 --------------------GYPKETKGGLFYDLQENRVFVSTNATFLEEDHVRNHQPCS 120
GYPKET+GGLF+D +ENRVFVSTNATFLEEDH+RNH+P S
Sbjct: 581 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRS 640
Query: 121 KLILSEISKEATDNTTTVVDQAGPSTRVVDGDDTSGQSHPSEELTTPRHSGRVITQPDRY 180
KL+LS EATD +T VVD+ GPS+R VD TSGQSHPS+ L PR SGRV++QP+RY
Sbjct: 641 KLVLS----EATDESTRVVDEVGPSSR-VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRY 700
Query: 181 LGFAETQVIIPDDGVEDALTYKQAMNDEDRDQWIKAMNLEMVSMYFFSVWELVEQPDGVK 240
LG ETQV+IPDDGVED L+YKQAMND D+DQW+KAM+LEM SMYF SVWELV+ P+GVK
Sbjct: 701 LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 760
Query: 241 PISCKWIYKRKRDQT--------------------------------------------- 300
PI CKWIYKRKRD
Sbjct: 761 PIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKF 820
Query: 301 ------------------------------------------------------------ 360
Sbjct: 821 YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIR 880
Query: 361 ------------------------------------------------------------ 367
Sbjct: 881 FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 940
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 8.3e-21 | 41.35 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 2.0e-19 | 37.86 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| P0CV72 | 1.5e-06 | 52.00 | Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BUN8 | 4.7e-136 | 49.83 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G0036... | [more] |
| A0A5A7U616 | 1.1e-121 | 44.82 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G0087... | [more] |
| A0A5A7UGR3 | 6.2e-120 | 54.87 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G0075... | [more] |
| A0A5D3DS50 | 2.0e-118 | 41.87 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G0017... | [more] |
| A0A5A7UL66 | 3.4e-118 | 53.30 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G0023... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK02840.1 | 9.7e-136 | 49.83 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0025945.1 | 1.0e-121 | 40.73 | gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... | [more] |
| KAA0059226.1 | 1.0e-121 | 40.73 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0049626.1 | 2.3e-121 | 44.82 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0035907.1 | 5.7e-120 | 40.31 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
