CmaCh04G020230 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cma_Chr04: 12839971 .. 12842349 (+)
RNA-Seq Expression	CmaCh04G020230
Synteny	CmaCh04G020230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACTGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGTAGCTCGGTGCGGCTTGGATGTGCTACAGTGCCTTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGAAGAGATTTGGTTTTGGCGGAGATGCGGAAAACCAGTTTAAGGTGTTTTTAGCCTCCAAATCGAGAGAACCACGACGACGGCGATTAACTCCGCTGCAGTATGATACCCACACATGAGACGAAGACTCACTGCCACAACCTATCGCCGTTTACCAGCTCTGAATATGGAGACAAACGGGGCCGGAGTGACTAAAGGACACCCGACGCTCAAAAGGCGACCATTTTTTTTCTTACTTTACTTATTGGCACTCCATTCGTCTTTTTCTCGGCTTCGTGGGAAAAAAACAATAATAATAAATAATCAAAATGGTAAAATCAAAGAAATGCCTGTTTTTGTTGAATTACTGAAATTTCCTTTTATCGAAATACTGAAATACTGAAATTTGATAGGTACTGTGATCATTGGCCAATGCTCATGGAAAACTTCTTTAGTACTGGGTTTGGTGGAGAATGTGATTCCTGCACCAATATGACACATTCTTTTAACAGATACCAAGAAGAAGCACTTGAGCTTAGTTAGCCCAGTTTTATGAGCATGCTTGAGTGATGTAAGTTTTGGAAAAATTACCTAGACTTAGGTTATATTTAATTAGCCAAAATATACCTAAGTAATGAGTATACCCAACCGTTTAAAATACTTAGTGGGAGGAAAAAAGTATATGAGATACATCGTTTTCCTTTTCACGGTCTCTGAAAAATTCACACCGTGAGATTCATGCTCGGCCTCGTGTCGCCCTGGGAGCGTCCTCCATTCGGAAGGTATTTGCATGAGCCAATAACAAGGTGAATAGAGAAAGTACTTATAGTAAGTGGAAGAAGGAAGTATATCAACACGTCCTATGGTCTCCACCACTAGGTTGCACCGTGAGATTCTCATGTTCCGCCTGCATGTTGCCCTAGAGCAACTACCCATTCGGAGGGTCGTAACATGGGAGTCGAAACAACGCAAACTCCAGAAATGGATACTATTTCTTAGGGCCATTCCCAACTTTGGCTTTTTCATTCAATAGCATTGTTGGGACCGATCTATGAGGCCTGAAATTGGTGGGCCACACTTGCGAAGAATTACTAAGAGTCAGTTTTTAAGTCAAGAATGTCTTCGTTTGGTGAATGAGTTATTGACTGCCCCTCGGTAGCAGTTGCTCTAACTCACTAAAGTATCGTTGCAAATTAATAATTTTTTTTTGGTACATTATTACATTTGCTAAAACTGATTGGATTAAACAGCATTAAGTCAAATCACTAATAGAATTTTCTTTATATCTCAGCATGACAAACTCAATAGTACATGTACTCGCTTTTGAGAAATCAAACCTGAACACAATACTGGTAATTGATGATTTAAGGTTTGTTTTAACTGAGGAATGTCCTCCAAAACCCAACTCAAATGCAAACCGAACAGTTCGGGATGCGTATGACAGATGGATAAAGGCAAATGACAAAGCCCGAGTGTACATTCTAGCCAGTATATCTGATGTTTTGGCTAAGAAACACGATGTTATGGGTACTGCTAAAGAGATTATTGAATCTCTAAAAGGGATGTTTGGACAACCGTCCTTCTCCACTCGACATGAAGCCATAAAATACATTTACAACTGTCGTATGAAAGAATGGACCTCAGTTAGAGAACATGTCCTGGTCATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCCAGTCAGTTTTATCATGGAGTCTCTTCCGAAGAGCTTTCCGCACAAATGTGGTGATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCACTTAACGAACAAGGGACGTACAGGAGAAGAAAATGTTGCTATCTTCAAGAAATTACAATGA

mRNA sequence

ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACTGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGTAGCTCGGTGCGGCTTGGATGTGCTACAGTGCCTTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCCAGTCAGTTTTATCATGGAGTCTCTTCCGAAGAGCTTTCCGCACAAATGTGGTGATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCACTTAACGAACAAGGGACGTACAGGAGAAGAAAATGTTGCTATCTTCAAGAAATTACAATGA

Coding sequence (CDS)

ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACTGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGTAGCTCGGTGCGGCTTGGATGTGCTACAGTGCCTTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCCAGTCAGTTTTATCATGGAGTCTCTTCCGAAGAGCTTTCCGCACAAATGTGGTGATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCACTTAACGAACAAGGGACGTACAGGAGAAGAAAATGTTGCTATCTTCAAGAAATTACAATGA

Protein sequence

MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWVKKMKLSLMRRVQSVLSWSLFRRAFRTNVVMNKIEYNLTALLNELQTYQSHLTNKGRTGEENVAIFKKLQ

Homology

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BLAST of CmaCh04G020230 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.9e-52
Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 0


Query: 6   LRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKR 65
           L  + A  +TF  L+  +KAQN+P DYL  HN AR +VGVGPM W N +AAYAQ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMV 125
            GDC MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN CVGG CGHYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 126 WRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
           WR+SVRLGCA V       F+ CNYDPPGN+IG++P+
Sbjct: 124 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of CmaCh04G020230 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-45
Identity = 84/155 (54.19%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 12  FMVTFIFLLAL----TKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 71
           F++ F+ L+      +KAQ++P DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 72  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWR 131
           +C +IHS GPYGEN+A G   + +G  AV +W +EK  Y++A+N C  G CGHYTQ+VWR
Sbjct: 69  NCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWR 128

Query: 132 SSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
            SVRLGCA V C      + CNYDP GNY+ EKPY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmaCh04G020230 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-43
Identity = 81/156 (51.92%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 8   IMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 67
           ++ + ++ F+ +    +AQN+  DYL  HN ARA+VGV P+ W + VAAYAQ YA +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 68  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 127
           DC ++HS G YGEN+A G     T A AV++W +EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 128 RSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
           R+SVR+GCA V C      V CNYDPPGNY GE PY
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmaCh04G020230 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.8e-43
Identity = 84/156 (53.85%), Postives = 113/156 (72.44%), Query Frame = 0


Query: 11  AFMVTFIFLLAL---TKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 70
           + ++T + +LA+    +AQN+P DYLA+HN ARA+VGVGPM W   +A+ AQ YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 130
           DC +IHS    GEN+A G   +FTG  AV+LW +E+P Y++A+N+CVGG+ CGHYTQ+VW
Sbjct: 67  DCNLIHSGA--GENLAKG-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVW 126

Query: 131 RSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
           R+SVRLGC    C     F+ CNYDP GN++GE+PY
Sbjct: 127 RNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

[Close]

BLAST of CmaCh04G020230 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.9e-43
Identity = 80/155 (51.61%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 9   MAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           + + ++ F+ +   + AQN+  DYL  HN ARA+VGV P+ W N VAAYAQ Y  +   D
Sbjct: 14  LVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAAD 73

Query: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVWR 128
           C ++HS G YGEN+A G     T A AV++W +EK  YDH SN C  G+ CGHYTQ+VWR
Sbjct: 74  CNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWR 133

Query: 129 SSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
           +SVR+GCA V C      V CNYDPPGN IG+ PY
Sbjct: 134 NSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of CmaCh04G020230 vs. ExPASy TrEMBL
Match: A0A6J1IDM7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472192 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.4e-95
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020230 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.7e-94
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020230 vs. ExPASy TrEMBL
Match: A0A6J1ICC8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474223 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.7e-94
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020230 vs. ExPASy TrEMBL
Match: A0A6J1IEK2 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473362 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.7e-94
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020230 vs. ExPASy TrEMBL
Match: A0A6J1IC05 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473363 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.9e-94
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIA GYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020230 vs. NCBI nr
Match: XP_022973608.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 357.8 bits (917), Expect = 7.0e-95
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020230 vs. NCBI nr
Match: XP_022971803.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971804.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971806.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974680.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974686.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974689.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974690.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975182.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975183.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.5e-94
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020230 vs. NCBI nr
Match: XP_022971801.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971802.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974677.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974684.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974688.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975326.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975679.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.5e-94
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020230 vs. NCBI nr
Match: XP_022974675.1 (basic form of pathogenesis-related protein 1-like, partial [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.5e-94
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmaCh04G020230 vs. NCBI nr
Match: XP_022974676.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-93
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60
           MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGPYGENIA GYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 167
           YTQMVWRSSVRLGCA VPCKANSQFVVCNYDPPGNYIGEKPYDSWV
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmaCh04G020230 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 4.4e-47
Identity = 86/148 (58.11%), Postives = 107/148 (72.30%), Query Frame = 0


Query: 16  FIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHST 75
           F+ L+   KAQ++P D+LA+HNRARAEVGVGP++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76  GPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCV-GGECGHYTQMVWRSSVRLGC 135
           G YGENIA       TG  AV +W +E+  YD+ SN C    +CGHYTQ+VWR+S RLGC
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 136

Query: 136 ATVPCKANSQFVVCNYDPPGNYIGEKPY 163
           A V C     F+ CNYDPPGN++GE PY
Sbjct: 137 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmaCh04G020230 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-46
Identity = 84/155 (54.19%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 12  FMVTFIFLLAL----TKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKG 71
           F++ F+ L+      +KAQ++P DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 72  DCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWR 131
           +C +IHS GPYGEN+A G   + +G  AV +W +EK  Y++A+N C  G CGHYTQ+VWR
Sbjct: 69  NCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWR 128

Query: 132 SSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
            SVRLGCA V C      + CNYDP GNY+ EKPY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmaCh04G020230 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-45
Identity = 82/151 (54.30%), Postives = 101/151 (66.89%), Query Frame = 0


Query: 13  MVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72
           +V   FL+  T AQN P DYL  HN ARA+VGV  + W  T+AAYA  Y+  RK DC ++
Sbjct: 11  IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVWRSSVR 132
           HS GPYGEN+A G    F+   AVKLW +EKP Y +A N C GG +C HYTQ+VWR SV+
Sbjct: 71  HSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVK 130

Query: 133 LGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
           +GCA V C     FV CNY+ PGN++GE PY
Sbjct: 131 IGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmaCh04G020230 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 175.3 bits (443), Expect = 6.0e-44
Identity = 82/161 (50.93%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 2   WTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAY 61
           +++ L I+AA +   +  L   KAQ++  DY+  HN+AR+++GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62  AEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHY 121
           A + KGDC ++HS GPYGEN+A     + +G  AV LW NEK  Y++ +N C  G CGHY
Sbjct: 66  ANQLKGDCRLVHSRGPYGENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 125

Query: 122 TQMVWRSSVRLGCATVPCKANSQFVVCNYDPPGNYIGEKPY 163
           TQ+VWR+SVRLGCA V C      + CNYDPPGNY  +KPY
Sbjct: 126 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmaCh04G020230 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-43
Identity = 80/136 (58.82%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 29  PGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYP 88
           P + L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DCAM HS GP+GEN+AAG + 
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAG-WG 101

Query: 89  EFTGADAVKLWANEKPLYDHASNKCVG-GECGHYTQMVWRSSVRLGCATVPCKANSQ-FV 148
             +G  A + W  EK  YD+ SN C G G CGHYTQ+VWR SVRLGCA+V CK +   +V
Sbjct: 102 TMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 149 VCNYDPPGNYIGEKPY 163
           +C+YDPPGNYIG++PY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

The following BLAST results are available for this feature:

BLAST of CmaCh04G020230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	9.9e-52	59.24	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	1.8e-45	54.19	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
P08299	1.3e-43	51.92	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q04108	3.8e-43	53.85	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P07053	4.9e-43	51.61	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of CmaCh04G020230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IDM7	3.4e-95	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1I475	1.7e-94	99.40	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1ICC8	1.7e-94	99.40	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IEK2	1.7e-94	99.40	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IC05	4.9e-94	98.80	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmaCh04G020230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973608.1	7.0e-95	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_022971803.1	3.5e-94	99.40	basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718...	[more]
XP_022971801.1	3.5e-94	99.40	basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718...	[more]
XP_022974675.1	3.5e-94	99.40	basic form of pathogenesis-related protein 1-like, partial [Cucurbita maxima]	[more]
XP_022974676.1	1.0e-93	98.80	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]

BLAST of CmaCh04G020230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	4.4e-47	58.11	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	1.3e-46	54.19	pathogenesis-related gene 1	[more]
AT1G50060.1	2.4e-45	54.30	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	6.0e-44	50.93	basic pathogenesis-related protein 1	[more]
AT2G19990.1	1.3e-43	58.82	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 117..136 score: 48.75 coord: 93..108 score: 30.47 coord: 48..66 score: 27.63
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 118..134 score: 63.28 coord: 95..108 score: 38.5 coord: 145..158 score: 58.05 coord: 48..66 score: 36.79
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 19..162
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..158 e-value: 5.7E-58 score: 208.6
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..150 e-value: 8.5E-23 score: 81.6
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 23..170 e-value: 1.2E-44 score: 154.1
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 23..164
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 19..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 29..162 e-value: 1.70219E-85 score: 248.317
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020230.1	CmaCh04G020230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane