CmaCh04G020200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cma_Chr04: 12807367 .. 12809221 (+)
RNA-Seq Expression	CmaCh04G020200
Synteny	CmaCh04G020200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACTTTCATGTTCCTCCTCGTCCTAACCAACGCTCAAAACGCCCCAGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTCGACGTCAACCCCATGCAATGGAGCAATACTGTGGCCGCGTACGCTATGGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAATCGGGCCGTACGGGGAAAACATAGCTGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTATGGGCGAACGAGAAGTCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTTAGATGGTGTGGCGAAGCTCGGTCCAGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAGGCCTTATGATTCTTGGGTGGTTCGAAGAGATTTGGTTTTAAAAATTTTATGAATAGTATTATATTGTCCGGTTTAAGTGAACTCTTGTGACTTTGTTTTGACCGCCTTAAGTTAACTCTTGTGACTTTGTTATGATCTCCTTCCTCGTAAACCCATGATCATAGAGTCTCCCCTCTAATTAAGTACATCACAGAGCCACCCTGAAGCTCGTAGATTTCTAGAACAACCTTCCCTTAATCGAGGCTCGACATAGCTAAGTTAAGTTGATTTTCTATTCTTCTTTGGAGCCTTTGAACAAAATACACCATTTGTTCGACACTTTTGACTACAAATTTGAGGCTAACAATTTCTTTGTTTGACATAGCTAAGTTAAGTTGATTTTCTATTCTTCTTATGATTCTCTGTTATATAATCCATCATAAAATTTTTGGGTTCAATTAATTCATTTCATTTACTCAAAATTTTAAGTAAAATATTAACATTATTTATTTATTTTCAAACCTTTAGTTAATAAAACAATAAATATATACGTGCATGAATACCTAAATGGTGAGTAAAAATGTATCTTAAATTTTAAGATTAACCTCTATGTGGATTAAGTTTTATTAATCCTAAAAAAAATTCATGCTAAATCTAGAAAATTTTCATTCATTTAACTTAATTCAAACAAAAATCTAGCCTAACTAAACATGGAAGCCGGAATGCATTGTTGAATTTCATAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCCATCGCATTCATTTCATTCATTTGAACCTAATTCAAACAAAAATCTAGCCTAACTAAACATGGAAGCCGGAATGCATTGTTGAATTTCATAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCCATCGCATTCATTTCATTCATTTGAACCTAATTCAAACAAAAATCTAGCCTAACTAAACATGGAAGCCGGAATGCATTGTTGAATTTCATAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCCATCGCATTCATTTCATTCATTTGAACCTAATTCAAAAAAAAATCTAGCCTAACTAAACATGGAAGCCCGAATGCATTGTTGAATTTTCGAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCAATCGCATTCCATATTAAGTTTTCCATCTCTATATAAATCCTTCCCTTATTCTCAATTTTCATCTCATCTCTCATCGAAATTATGTGGACTCAAACCCCTCCGATCATGGCTGCTTTCAGTTGCCACTTTCATGTTCCTCCTTGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTTCCTCGCGCTTCACAATCGCGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGACCGCATACGCTCAAGCCTATGTCGAAAAATGA

mRNA sequence

ATGGACACTTTCATGTTCCTCCTCGTCCTAACCAACGCTCAAAACGCCCCAGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTCGACGTCAACCCCATGCAATGGAGCAATACTGTGGCCGCGTACGCTATGGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAATCGGGCCGTACGGGGAAAACATAGCTGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTATGGGCGAACGAGAAGTCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGTTGCCACTTTCATGTTCCTCCTTGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTTCCTCGCGCTTCACAATCGCGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGACCGCATACGCTCAAGCCTATGTCGAAAAATGA

Coding sequence (CDS)

ATGGACACTTTCATGTTCCTCCTCGTCCTAACCAACGCTCAAAACGCCCCAGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTCGACGTCAACCCCATGCAATGGAGCAATACTGTGGCCGCGTACGCTATGGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAATCGGGCCGTACGGGGAAAACATAGCTGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTATGGGCGAACGAGAAGTCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGTTGCCACTTTCATGTTCCTCCTTGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTTCCTCGCGCTTCACAATCGCGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGACCGCATACGCTCAAGCCTATGTCGAAAAATGA

Protein sequence

MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGVATFMFLLALTNAQNAPRDFLALHNRARAQVGVGPMQWSNTVTAYAQAYVEK

Homology

[Close]

BLAST of CmaCh04G020200 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27
Identity = 57/101 (56.44%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           TF  L+  + AQN+P DYL  HN AR QV V PM W N +AAYA  YA +R GDC MIHS
Sbjct: 13  TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHS 72

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C+G
Sbjct: 73  HGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVG 112

[Close]

BLAST of CmaCh04G020200 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-23
Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L++ + AQ++P DYL +HN+AR  V V PMQW   VAAYA +YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A G   + +G  AV +W +EK+ Y++A+N C GV
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTCNGV 116

[Close]

BLAST of CmaCh04G020200 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-21
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L+V   AQ++  DY+  HN+AR+Q+ V PMQW   +AAYA  YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A     + +G  AV LW NEK+ Y++ +N C GV
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTCNGV 116

[Close]

BLAST of CmaCh04G020200 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.0e-21
Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 1   MDTFMFLLVLTN---AQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDC 60
           + T +  LV+++   AQN+  DYL  HN ARA V V P+ W + VAAYA  YA +   DC
Sbjct: 15  VSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADC 74

Query: 61  AMIHSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKC 102
            ++HS G YGEN+A G     T A AV++W +EK  YDH SN C
Sbjct: 75  NLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTC 118

[Close]

BLAST of CmaCh04G020200 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.8e-21
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 4   FMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI 63
           F+ +   ++AQN+  DYL  HN ARA V V P+ W N VAAYA  Y  +   DC ++HS 
Sbjct: 21  FLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSH 80

Query: 64  GPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKC 102
           G YGEN+A G     T A AV++W +EK  YDH SN C
Sbjct: 81  GQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTC 118

[Close]

BLAST of CmaCh04G020200 vs. ExPASy TrEMBL
Match: A0A6J1IBS8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472189 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.5e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI
Sbjct: 5   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 64

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG
Sbjct: 65  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 107

[Close]

BLAST of CmaCh04G020200 vs. ExPASy TrEMBL
Match: A0A6J1EQ08 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436599 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.9e-48
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           M TF+F L LTNAQNAPGDYL LHNRARAQV V PMQWSNTVAAYA AYAEKRKGDCAMI
Sbjct: 13  MATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HS GPYGENIAAGYYPEFTGADAVKLWANEK+LYDHASNKCMG
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMG 115

[Close]

BLAST of CmaCh04G020200 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.8e-48
Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           TF+FLL LTNAQNAPGDYLVLHNRARAQV V PMQWSNTVAAYA AYAEKRKGDCAMIHS
Sbjct: 15  TFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHS 74

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGENIAAGYYPEFTGADAVKLWANEK LYDHASNKC+G
Sbjct: 75  TGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVG 115

[Close]

BLAST of CmaCh04G020200 vs. ExPASy TrEMBL
Match: A0A6J1EQL1 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436565 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.9e-47
Identity = 92/103 (89.32%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           M TF+FLL LTNAQNAPGDYL LHNRARAQV V PMQWSNTVA YA AYAEKRKGDCAMI
Sbjct: 1   MATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDCAMI 60

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HS GPYGENIAAGYYPEFTGADAVKLWANEK LYDHASNKC+G
Sbjct: 61  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVG 103

[Close]

BLAST of CmaCh04G020200 vs. ExPASy TrEMBL
Match: A0A6J1IEX8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111475711 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.0e-47
Identity = 92/103 (89.32%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           M TF+FLL LT AQNAPGDYLVLHNRARA+V V PMQWSNTVAAYA AYAEKRKGDCAMI
Sbjct: 5   MVTFIFLLALTKAQNAPGDYLVLHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 64

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HS GPYGENIAAGYYPEFTGADAVKLWANEK LYDHASNKC+G
Sbjct: 65  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVG 107

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: XP_022973605.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 219.5 bits (558), Expect = 2.0e-53
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI
Sbjct: 5   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 64

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG
Sbjct: 65  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 107

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: XP_022930116.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           M TF+F L LTNAQNAPGDYL LHNRARAQV V PMQWSNTVAAYA AYAEKRKGDCAMI
Sbjct: 13  MATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HS GPYGENIAAGYYPEFTGADAVKLWANEK+LYDHASNKCMG
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMG 115

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           TF+FLL LTNAQNAPGDYLVLHNRARAQV V PMQWSNTVAAYA AYAEKRKGDCAMIHS
Sbjct: 15  TFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHS 74

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGENIAAGYYPEFTGADAVKLWANEK LYDHASNKC+G
Sbjct: 75  TGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVG 115

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: XP_023522018.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-47
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           M TF+FLLVLTNAQNAPGDYL LHNRARAQV V PMQWSNTVA YA AYAEKRKGDCAMI
Sbjct: 13  MATFIFLLVLTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDCAMI 72

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HS GPYGENIAAGYYPEFTGADAVKLWANEK LYDHASNKC+G
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVG 115

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: XP_023522017.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 2.7e-47
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMI 60
           M TFMFLL LTNAQNAP DYL LHNRARAQV V+PMQWSNTVAAYA AYAEKRKGDCAMI
Sbjct: 13  MATFMFLLALTNAQNAPSDYLALHNRARAQVGVDPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           HS GPYGENIAAGYYPEFTGADAVKLWANEK LYDHASNKC+G
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVG 115

[Close]

BLAST of CmaCh04G020200 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 54/98 (55.10%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 6   FLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGP 65
           FL+V TNAQN P DYL  HN ARAQV V  + W  T+AAYA+ Y+  RK DC ++HS GP
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 66  YGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           YGEN+A G    F+   AVKLW +EK  Y +A N C G
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTG 113

[Close]

BLAST of CmaCh04G020200 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-24
Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L++ + AQ++P DYL +HN+AR  V V PMQW   VAAYA +YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A G   + +G  AV +W +EK+ Y++A+N C GV
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTCNGV 116

[Close]

BLAST of CmaCh04G020200 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23
Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 4   FMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI 63
           F+ L+V   AQ++P D+L +HNRARA+V V P++W   VAAYA  YA +RKGDCAM HS 
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 64  GPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKC 102
           G YGENIA       TG  AV +W +E+  YD+ SN C
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTC 113

[Close]

BLAST of CmaCh04G020200 vs. TAIR 10
Match: AT1G50050.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22
Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 0


Query: 6   FLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI-G 65
           FL++ TNAQNA  DYL  HN ARAQV V  + W   VAAYA  YA  RK DC++  S  G
Sbjct: 16  FLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPSTGG 75

Query: 66  PYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            YGEN+A G    FTG  AV LW NEK  Y++ +N C+G
Sbjct: 76  SYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIG 114

[Close]

BLAST of CmaCh04G020200 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L+V   AQ++  DY+  HN+AR+Q+ V PMQW   +AAYA  YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A     + +G  AV LW NEK+ Y++ +N C GV
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTCNGV 116

The following BLAST results are available for this feature:

BLAST of CmaCh04G020200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	7.3e-27	56.44	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	3.7e-23	51.02	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q9ZNS4	2.7e-21	48.98	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]
P08299	6.0e-21	47.12	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P07053	7.8e-21	47.96	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of CmaCh04G020200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBS8	9.5e-54	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EQ08	5.9e-48	90.29	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EQJ7	7.8e-48	92.08	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EQL1	2.9e-47	89.32	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IEX8	5.0e-47	89.32	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmaCh04G020200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973605.1	2.0e-53	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_022930116.1	1.2e-47	90.29	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022930064.1	1.6e-47	92.08	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_023522018.1	2.1e-47	90.29	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023522017.1	2.7e-47	90.29	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G020200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	2.2e-26	55.10	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	2.7e-24	51.02	pathogenesis-related gene 1	[more]
AT4G33720.1	1.3e-23	53.06	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50050.1	1.1e-22	53.54	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	1.9e-22	48.98	basic pathogenesis-related protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 15..155 e-value: 6.8E-13 score: 58.8
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 23..103 e-value: 1.1E-7 score: 32.8
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 116..155 e-value: 7.6E-6 score: 28.1
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 16..115 e-value: 1.1E-18 score: 69.9
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 118..154
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 8..102
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 114..154 coord: 13..103
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 114..154 coord: 13..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020200.1	CmaCh04G020200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane