CmaCh04G020150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G020150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cma_Chr04: 12727418 .. 12729837 (+)
RNA-Seq Expression	CmaCh04G020150
Synteny	CmaCh04G020150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATGGAGTAACACCGTGGCCGCATACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCAGGCCGTATGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCAGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCCGTATGATCATTTGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCCCGGTGCGGCTTGGATGTGCTAAAGTGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGTAACTATATTGGGGAAAAGCCTTATGGTTCTTCTTTGTAAACAGCTTTGGTTCGAGAATTTTATGAATTGTAATAAAGTTTGTGAGAGAATCATGAATTACTGGAAATCTTCCCCCAAAACTGTAAAAACTAATGGTGAATTATCAAGTGAATTAGGAATCTCCACAATAATATTATATTGTATACTTTTCTCCCCTAAATGGAGAATGAATGCATTCATGAATTTCTACAATTTTATGATATTGCCTACTTTTCTACCCAAAATTGCAAAAATGAATGGAGAAAATTAACTAGATTTAGAAATCACTCATCTCCACAATGGTATGATCTTTGTTGGATGAATGTCCCACCTTGGCTAATTTAGGGAATGATCATGGTTTCATAATCACAGAATACTATCTCCATCGGGGTGAGGTCTTTTGGAAAGTGCAAAGCAAAGCGATGAGAGCTTTTGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCATGTTCGTCTAACATGGTATCAGAGCCATGCCCTAAACTTAGCCATGTCAATAGAATTCTCAAATGTCGAACAAAGAACTCCAAAAAAAAAAAAAAAAAAGGAAAAGAAAAGGAGTCGAGGGGAGGTGTTGGATGAAAGTCCCACTCGGCGAATTTAGGGAACGATCATGGGTCCATTGAGGTGAACTCAAAGTGGAAAATGTCTTCGTAATGGTATGATATTATGTGCTTTCTTACCAATACTGCAAAAATAAATGGAGAACCATCCATCTCTACATTGATATGATACTGTCTAGTTTGAGATTAAGTACTTTCTGCTTGTTGTCCTGTGAGATTATTCCTTACTTATAGATTCATGATCATTCTCTTAACAATTTTACACACGGAGAATAGCTCCCAGAATAGCTGTCAAATGTTGTTTGAAGTCAACGGGAATAAATGTCCACAGCGGAGATGCGAAAAACCAGTCACGATGTTTCGGCCTCCAAATCGGGGGACCCACGACGGCGATTAGCTCTGCTGCACAGAACTCAATAGTAATTAAAATATACTATTAACCGAGAGGTAGAAGGTTTTATTTCATCCATGAATATATGTTTTAAGTTGCGGTTACTTTTAAAAAAGGAAAAAGAAATACAAAAATTGATTACTCAATTAATAGTAAATATTTTTAATCTAAAATTCTTTTTATATAATAAACCCCATCTAAATAGGTTATAAAAATTTTAGGTTAAATTAGTTCATTTCATATACTCAAAATTTTAATAAATTATTAATATTATTTATTTATTTTTTAACATTTAATTAACCAATTCAATTTTAATACATATTTTAAAAAATTGGAAAAGAATAAATAAATAAAATTATGAAACTAAATAAAACAATAAATATATACTTCCAAGTAAAAATGTATCTTTTAAGATTAATCATAATCGGGTGGATTAAGTTTCATTAATCCTAAAAAAAAAATTCATAAACTAGCTAAATCTAGAAAATTTTCATTTATTTGAACCTAATTCCAAACAAAAATATAGCCCGTAATTAAACATGGAAGCGAGAATGAATTTATTCTCTTTGAATTCCCAAGCATGACATAATTAGTTCAAAATTCATGGTTTTCCCATCACATTCCATATTAAGTTTTCCATCTCTATATAAATCATTCCCTCATTCTCAATCTTCATCTCATCTCTCATCGAAATTATGTGGACTCAAATCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAATGCTCAAAACACCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCAAGCCGAGGTCAGTGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGAGGAAAAAAGAAAGGGTGACTGCGCCATGATCCACTCAACCGGGCCGTACGGGGAAAACATAGTCGCGGGCTACTACCCTGAATTCTTCAGGGCGGATGCGGTGAAGCTGCGGGCAAACGAGAAGCCACTGTATGATCATGCGTATAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGGAGCTCGGTGAGGCTTGGATGTGCTAG

mRNA sequence

ATGCAATGGAGTAACACCGTGGCCGCATACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCAGGCCGTATGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCAGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCCGTATGATCATTTGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCCCGGTGCGGCTTGGATGTGCTAAAGTGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGATGGTGTGGTGGAGCTCGGTGAGGCTTGGATGTGCTAG

Coding sequence (CDS)

ATGCAATGGAGTAACACCGTGGCCGCATACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCAGGCCGTATGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCAGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCCGTATGATCATTTGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCCCGGTGCGGCTTGGATGTGCTAAAGTGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGATGGTGTGGTGGAGCTCGGTGAGGCTTGGATGTGCTAG

Protein sequence

MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYDHLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVVELGEAWMC

Homology

[Close]

BLAST of CmaCh04G020150 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.5e-35
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           M W N +AAYAQ YA +R GDC MIHS  PYGEN+AA  +P+   A AVK+WV+EK  YD
Sbjct: 46  MTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYD 105

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           + SN CVGG CGHYTQ+VWR+ VRLGCA+V       F+ CNYDPP   +
Sbjct: 106 YNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFI 154

[Close]

BLAST of CmaCh04G020150 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-32
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           M W + +AAYAQ YA +R  DC MIHS  PYGEN+AA  +P+   A AVK+W +EK  YD
Sbjct: 44  MTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYD 103

Query: 61  HLSNKCVGGE-CGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVVE 112
           + SN C  G+ CGHYTQ+VWR  VRLGCA+V C +   F+ CNYDPP   ++
Sbjct: 104 YNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWVFITCNYDPPGNYID 154

[Close]

BLAST of CmaCh04G020150 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           + W N VAAYAQ Y  +   DC ++HS   YGEN+A G     T A AV++WV+EK  YD
Sbjct: 53  LTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYD 112

Query: 61  HLSNKCVGGE-CGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SN C  G+ CGHYTQ+VWR+ VR+GCA+V C      V CNYDPP  V+
Sbjct: 113 HDSNTCAQGQVCGHYTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVI 163

[Close]

BLAST of CmaCh04G020150 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 131.0 bits (328), Expect = 9.1e-30
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           + W + VAAYAQ YA +   DC ++HS   YGEN+A G     T A AV++WVNEK  Y 
Sbjct: 53  LTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYA 112

Query: 61  HLSNKCVGGE-CGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SN C  G+ CGHYTQ+VWR+ VR+GCA+V C      V CNYDPP  V+
Sbjct: 113 HDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVI 163

[Close]

BLAST of CmaCh04G020150 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.1e-30
Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQW   +AAYA+ YA + KGDC ++HS  PYGEN+A     + +G  AV LWVNEK  Y+
Sbjct: 49  MQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS-GGDLSGVAAVNLWVNEKANYN 108

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPP 107
           + +N C  G CGHYTQ+VWR+ VRLGCAKV C      + CNYDPP
Sbjct: 109 YDTNTC-NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIISCNYDPP 152

[Close]

BLAST of CmaCh04G020150 vs. ExPASy TrEMBL
Match: A0A6J1H6F3 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460042 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.1e-57
Identity = 100/110 (90.91%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLWVNEKP YD
Sbjct: 48  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYD 107

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA++PCKANSQFVVCNYDPP   +
Sbjct: 108 HASNKCVGGECGHYTQMVWRSSVRLGCARIPCKANSQFVVCNYDPPGNYI 157

[Close]

BLAST of CmaCh04G020150 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 48  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 107

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 108 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 157

[Close]

BLAST of CmaCh04G020150 vs. ExPASy TrEMBL
Match: A0A6J1ICC8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474223 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 75  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 134

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 135 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 184

[Close]

BLAST of CmaCh04G020150 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 48  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 107

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 108 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 157

[Close]

BLAST of CmaCh04G020150 vs. ExPASy TrEMBL
Match: A0A6J1IAY2 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473383 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 48  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 107

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 108 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 157

[Close]

BLAST of CmaCh04G020150 vs. NCBI nr
Match: XP_022958894.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56
Identity = 100/110 (90.91%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLWVNEKP YD
Sbjct: 48  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYD 107

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA++PCKANSQFVVCNYDPP   +
Sbjct: 108 HASNKCVGGECGHYTQMVWRSSVRLGCARIPCKANSQFVVCNYDPPGNYI 157

[Close]

BLAST of CmaCh04G020150 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 228.0 bits (580), Expect = 4.2e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 48  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 107

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 108 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 157

[Close]

BLAST of CmaCh04G020150 vs. NCBI nr
Match: XP_023521426.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 4.2e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 118 MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 177

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 178 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 227

[Close]

BLAST of CmaCh04G020150 vs. NCBI nr
Match: XP_022930072.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 228.0 bits (580), Expect = 4.2e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 48  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 107

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 108 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 157

[Close]

BLAST of CmaCh04G020150 vs. NCBI nr
Match: XP_022971803.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971804.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971806.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974680.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974686.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974689.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974690.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975182.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975183.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 4.2e-56
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQWSNTVAAYAQAYAEKRKGDCAMIHST PYGENIAAGYYPEFTGADAVKLW NEKP YD
Sbjct: 75  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYD 134

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           H SNKCVGGECGHYTQMVWRS VRLGCA+VPCKANSQFVVCNYDPP   +
Sbjct: 135 HASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYI 184

[Close]

BLAST of CmaCh04G020150 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-31
Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 0


Query: 3   WSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYDHL 62
           W + VAAYA +YA +R  DCA++HS  P+GENIA     E +  DA ++W+NEK  YD+ 
Sbjct: 47  WDDEVAAYAASYANQRINDCALVHSNGPFGENIAMS-SGEMSAEDAAEMWINEKQYYDYD 106

Query: 63  SNKC---VGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPPDGVV 111
           SN C    GG C HYTQ+VW++ VRLGCAKV C +   F+ CNYDPP   +
Sbjct: 107 SNTCNDPNGGTCLHYTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYI 156

[Close]

BLAST of CmaCh04G020150 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 131.0 bits (328), Expect = 6.5e-31
Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQW   +AAYA+ YA + KGDC ++HS  PYGEN+A     + +G  AV LWVNEK  Y+
Sbjct: 49  MQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS-GGDLSGVAAVNLWVNEKANYN 108

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPP 107
           + +N C  G CGHYTQ+VWR+ VRLGCAKV C      + CNYDPP
Sbjct: 109 YDTNTC-NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIISCNYDPP 152

[Close]

BLAST of CmaCh04G020150 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 130.6 bits (327), Expect = 8.5e-31
Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           MQW   VAAYA++YAE+ +G+C +IHS  PYGEN+A G   + +G  AV +WV+EK  Y+
Sbjct: 49  MQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYN 108

Query: 61  HLSNKCVGGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDP 106
           + +N C  G CGHYTQ+VWR  VRLGCAKV C      + CNYDP
Sbjct: 109 YAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTIISCNYDP 151

[Close]

BLAST of CmaCh04G020150 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 3.2e-30
Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 1   MQWSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYD 60
           ++W   VAAYA+ YA +RKGDCAM HS+  YGENIA       TG  AV +WV+E+  YD
Sbjct: 49  LRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAWS-SGSMTGVAAVDMWVDEQFDYD 108

Query: 61  HLSNKCV-GGECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPP 107
           + SN C    +CGHYTQ+VWR+  RLGCAKV C     F+ CNYDPP
Sbjct: 109 YDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTFITCNYDPP 154

[Close]

BLAST of CmaCh04G020150 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-30
Identity = 55/105 (52.38%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 3   WSNTVAAYAQAYAEKRKGDCAMIHSTRPYGENIAAGYYPEFTGADAVKLWVNEKPPYDHL 62
           W  T+AAYA  Y+  RK DC ++HS  PYGEN+A G    F+   AVKLWV+EKP Y + 
Sbjct: 48  WDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYA 107

Query: 63  SNKCVGG-ECGHYTQMVWRSPVRLGCAKVPCKANSQFVVCNYDPP 107
            N C GG +C HYTQ+VWR  V++GCA+V C     FV CNY+ P
Sbjct: 108 YNNCTGGKQCLHYTQVVWRDSVKIGCARVQCTNTWWFVSCNYNSP 152

The following BLAST results are available for this feature:

BLAST of CmaCh04G020150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	5.5e-35	59.09	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
Q08697	2.6e-32	54.46	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P07053	3.1e-30	52.25	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09042	9.1e-30	52.25	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]
Q9ZNS4	9.1e-30	54.72	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]

BLAST of CmaCh04G020150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6F3	9.1e-57	90.91	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1I475	2.0e-56	90.91	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1ICC8	2.0e-56	90.91	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EQJ7	2.0e-56	90.91	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IAY2	2.0e-56	90.91	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmaCh04G020150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958894.1	1.9e-56	90.91	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022930064.1	4.2e-56	90.91	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_023521426.1	4.2e-56	90.91	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930072.1	4.2e-56	90.91	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022971803.1	4.2e-56	90.91	basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718...	[more]

BLAST of CmaCh04G020150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19690.1	5.0e-31	51.35	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	6.5e-31	54.72	basic pathogenesis-related protein 1	[more]
AT2G14610.1	8.5e-31	54.29	pathogenesis-related gene 1	[more]
AT4G33720.1	3.2e-30	55.14	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50060.1	4.2e-30	52.38	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 70..89 score: 48.75 coord: 20..36 score: 29.04 coord: 46..61 score: 30.47 coord: 1..17 score: 27.3
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 1..17 score: 35.24 coord: 71..87 score: 60.43 coord: 48..61 score: 40.9 coord: 98..111 score: 39.55
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..108
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 1..111 e-value: 5.3E-29 score: 112.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 2..103 e-value: 3.2E-16 score: 60.3
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 1..114 e-value: 3.2E-31 score: 110.5
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 1..110
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020150.1	CmaCh04G020150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane