CmaCh04G019940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G019940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Location	Cma_Chr04: 11842927 .. 11843420 (-)
RNA-Seq Expression	CmaCh04G019940
Synteny	CmaCh04G019940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCAGGTCCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGCAAAGTGGCTTTGTTACCTATTCCGGTAGGAGCCGCAGATTCTTTGGTACATCATAGTCAGGCATTTACGATTCATGTAACGGTATTGATACTCCTTCAAGGGGTTCCATTTTCTCGTAGCTCGCGTTTAATACCGGATAAAGCAAATCAAATCTAATTTTGGGTTTCGTTTCCCTTGTGATTGGGCCGGGAAGAGGGGGTAGATGTCAAGTATCCGCTTGCTTGGGATCATGTCTTCTTAGGGATATTTTGGATGGACAATTCCATTTTAGTAGTAAGTAATATGCCTGCCATTTATAGTGGAAAATGCAGTCAGATGTTTGGAGTAGTGTAAGTGATCAAGGGGTAGTAACTCATATTACGGGAGGAAACTTTGCGCAGAGTTCCATCATTACTATTAATGGGAGGCTTCGCGATTTCTTATAG

mRNA sequence

ATGGCCCCAGGTCCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGCAAAGTGGCTTTGTTACCTATTCCGGTAGGAGCCGCAGATTCTTTGGTACATCATAGTCAGGCATTTACGATTCATGTAACGTGGAAAATGCAGTCAGATGTTTGGAGTAGTGTAAGTGATCAAGGGGTAGTAACTCATATTACGGGAGGAAACTTTGCGCAGAGTTCCATCATTACTATTAATGGGAGGCTTCGCGATTTCTTATAG

Coding sequence (CDS)

ATGGCCCCAGGTCCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGCAAAGTGGCTTTGTTACCTATTCCGGTAGGAGCCGCAGATTCTTTGGTACATCATAGTCAGGCATTTACGATTCATGTAACGTGGAAAATGCAGTCAGATGTTTGGAGTAGTGTAAGTGATCAAGGGGTAGTAACTCATATTACGGGAGGAAACTTTGCGCAGAGTTCCATCATTACTATTAATGGGAGGCTTCGCGATTTCTTATAG

Protein sequence

MAPGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVTWKMQSDVWSSVSDQGVVTHITGGNFAQSSIITINGRLRDFL

Homology

[Close]

BLAST of CmaCh04G019940 vs. ExPASy Swiss-Prot
Match: Q2QD89 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 7.0e-30
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy Swiss-Prot
Match: Q6EW48 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-29
Identity = 79/155 (50.97%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG T GTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATAGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFA 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy Swiss-Prot
Match: Q0G9W2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.6e-29
Identity = 79/155 (50.97%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TT TSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTSTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFA 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy Swiss-Prot
Match: P58310 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus OX=34305 GN=psaA PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.6e-29
Identity = 79/155 (50.97%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVG KVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGNKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFA 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy Swiss-Prot
Match: Q68S06 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Panax ginseng OX=4054 GN=psaA PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.6e-29
Identity = 79/155 (50.97%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TT TSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTSTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFA 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy TrEMBL
Match: A0A6V7PYA1 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS19073 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 76/129 (58.91%), Postives = 81/129 (62.79%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TT TSLTWGGG+L+AVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTSTSLTWGGGELIAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFA 555

Query: 62  ----------------------------WKMQSDVWSSVSDQGVVTHITGGNFAQSSIIT 92
                                       WKMQSDVW ++SDQGVVTHITGGNFAQSS IT
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGHVNWKMQSDVWGTISDQGVVTHITGGNFAQSS-IT 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy TrEMBL
Match: A0A218KG56 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaA PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy TrEMBL
Match: A0A410HF85 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Trichosanthes kirilowii OX=3677 GN=psaA PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy TrEMBL
Match: A0A1X9Q1T9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. ExPASy TrEMBL
Match: A0A249RZM5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. cantalupensis OX=3658 GN=psaA PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. NCBI nr
Match: CAD1835862.1 (unnamed protein product [Ananas comosus var. bracteatus])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 76/129 (58.91%), Postives = 81/129 (62.79%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TT TSLTWGGG+L+AVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTSTSLTWGGGELIAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFA 555

Query: 62  ----------------------------WKMQSDVWSSVSDQGVVTHITGGNFAQSSIIT 92
                                       WKMQSDVW ++SDQGVVTHITGGNFAQSS IT
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGHVNWKMQSDVWGTISDQGVVTHITGGNFAQSS-IT 615

[Close]

BLAST of CmaCh04G019940 vs. NCBI nr
Match: YP_009751738.1 (photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QJR52956.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum])

HSP 1 Score: 131.0 bits (328), Expect = 5.4e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. NCBI nr
Match: YP_009752243.1 (photosystem I P700 apoprotein A1 [Trichosanthes baviensis] >YP_009753789.1 photosystem I P700 apoprotein A1 [Trichosanthes pilosa] >QIT04217.1 photosystem I P700 apoprotein A1 [Trichosanthes baviensis] >QIT05653.1 photosystem I P700 apoprotein A1 [Trichosanthes pilosa])

HSP 1 Score: 131.0 bits (328), Expect = 5.4e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. NCBI nr
Match: YP_009753174.1 (photosystem I P700 apoprotein A1 [Trichosanthes truncata] >QIT06246.1 photosystem I P700 apoprotein A1 [Trichosanthes truncata])

HSP 1 Score: 131.0 bits (328), Expect = 5.4e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. NCBI nr
Match: YP_009447450.1 (photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 PsaA [Cucurbita ecuadorensis] >ALO22332.1 PsaA [Cucurbita maxima subsp. andreana] >ATY69900.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima])

HSP 1 Score: 131.0 bits (328), Expect = 5.4e-27
Identity = 81/155 (52.26%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG TTGTSLTWGGGDLVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGATTGTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFS 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSD 615

[Close]

BLAST of CmaCh04G019940 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 124.8 bits (312), Expect = 3.6e-29
Identity = 77/155 (49.68%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 2   APGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAADSLVHHSQAFTIHVT----------- 61
           APG T  TSLTWGGG+LVAVGGKVALLPIP+G AD LVHH  AFTIHVT           
Sbjct: 496 APGETASTSLTWGGGELVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFA 555

Query: 62  ------------------------------------------------------WKMQSD 92
                                                                 WKMQSD
Sbjct: 556 RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSD 615

The following BLAST results are available for this feature:

BLAST of CmaCh04G019940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD89	7.0e-30	52.26	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psa...	[more]
Q6EW48	3.5e-29	50.97	Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA...	[more]
Q0G9W2	4.6e-29	50.97	Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA ...	[more]
P58310	4.6e-29	50.97	Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus OX=34305 GN=ps...	[more]
Q68S06	4.6e-29	50.97	Photosystem I P700 chlorophyll a apoprotein A1 OS=Panax ginseng OX=4054 GN=psaA ...	[more]

BLAST of CmaCh04G019940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6V7PYA1	1.4e-28	58.91	Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS...	[more]
A0A218KG56	2.6e-27	52.26	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus var. hardwicki...	[more]
A0A410HF85	2.6e-27	52.26	Photosystem I P700 chlorophyll a apoprotein A1 OS=Trichosanthes kirilowii OX=367...	[more]
A0A1X9Q1T9	2.6e-27	52.26	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psa...	[more]
A0A249RZM5	2.6e-27	52.26	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. cantalupensi...	[more]

BLAST of CmaCh04G019940 vs. NCBI nr


Match Name	E-value	Identity	Description
CAD1835862.1	2.8e-28	58.91	unnamed protein product [Ananas comosus var. bracteatus]	[more]
YP_009751738.1	5.4e-27	52.26	photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photo...	[more]
YP_009752243.1	5.4e-27	52.26	photosystem I P700 apoprotein A1 [Trichosanthes baviensis] >YP_009753789.1 photo...	[more]
YP_009753174.1	5.4e-27	52.26	photosystem I P700 apoprotein A1 [Trichosanthes truncata] >QIT06246.1 photosyste...	[more]
YP_009447450.1	5.4e-27	52.26	photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 Ps...	[more]

BLAST of CmaCh04G019940 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00350.1	3.6e-29	49.68	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 1..49 e-value: 2.8E-10 score: 40.5
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 50..91 e-value: 4.4E-11 score: 43.3
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 6..91
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 50..91 e-value: 3.9E-7 score: 28.7 coord: 5..50 e-value: 1.4E-9 score: 36.8
IPR006243	Photosystem I PsaA	PANTHER	PTHR30128:SF61	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 2..50
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 2..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G019940.1	CmaCh04G019940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043229	intracellular organelle
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding