CmaCh04G019920 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G019920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Location	Cma_Chr04: 11807650 .. 11810288 (-)
RNA-Seq Expression	CmaCh04G019920
Synteny	CmaCh04G019920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCCGGTAATTCTATTGAAGCACAAAATTGGTTGAAGATCACAAGGCCTTTCAAATAAGAAAATTCTCTCTCTCTTTCTTTCATAGGTATTATTAGTTAGCAATTTGTCTATTTGTTATAGTTTGTTGTCCGCATCAGTCAAATCAACTAAAAGGGATCATTTCTCAAGCAGGGAAGAACCAAGCAAGATCGTTCAATTTCCTTTGGTATAAGGTTAAACGATACAGAGATAGATTAGAGAATCCATTTGATAAAAAGATAATTCTATTTATATAAAGGGTTGATAAGATTCAAAAGATCCGTTGAGCGCCTCTTGGCTATGGCATAATAGATCCAAACACTTGCCTCGGATCCACTTCCAGATCATAATTGCTCTAGTGAATAACTAAAACCAAAATGGGAGATAGCAGAGACAGAGAAAGAAACTCAGTATAAAAATCTTTCATAGGTTCACTAATTACTTCACTATTGGCGGGGCTCTTTGTATGTGTTGTCCTGAAAGAGGAGGACTCCAGGTGCATGAGTGATTATTCGTTAACCGGAACCAGAAGTCAAAATTGGGGTAGATAGGGCGTAAAACCTTCTTTCGAGGAATGGGCCAGCCAGACCGGGTCATTTCTCTAAAACGAACAATAACTAAGGGGATACTACCACTTGGATTGATTTGGAACCTTCCTTCATGTTGATGCCCACGATTTCGATAGCCATACTAGTTGGAGGAGATCTCTCGAAAAAAGTCTTTAGTGCGCATTTTGACCAACTCTCCATCATCTTTCTTTCTTTGTTTGGCTGAGTGGGATGTATTTCCACGGTGCTCCTTTTCCAATTATGAAGCATGGCTAGGCGATCCTACTCACATTGGCCCTAGTGCCCAGGTGGTTTGGCCAATAGTGGGCCAAGAAATATTGAATGGTGATGTAGGCGGGGGGTTTCGAGGAATACAAATAACCTCTAGGTTTTTTCAGATGTGGCGAGCATCTGGAATAACTAGTGAATTACAACTTTATTGTACGGCAATTGGTGCATTAGTCTTTTCAGCCTTAATGCTTTTTGCTGGTTGGTTTCATTATCACAAGGCTGCTTCAAAATTGGCTTGTAAGATGTAGAATCCATGTTCAATCACCATTTAGCGTAGCGGGTCTGCTAGGACTTGGGGCTCTTTCTTGGGCGGGACATCAAGTACACCTATCTTTACCGATTAACCACTTTCTAAATGATGCTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTCTCTTGAATTGGGATCTTTTGGCGCAACTTTCTTCTAGTAAAGCGGAGGGAGCAACCCCATTTTTCACTTGGAATTGGTCAAAGCGGAATTTCTGACTTTTCGCAGAGGATTAGACCCAGTAACAGGTGGTCTATGGTTAACCGATATTGCACTCATTTAGCTATTAGTATTCTTTTCCTAATAGCAGGTCTCATGTATAGATAGGACCAACTGGGGCATTGGTTAGGGTATAAAAGATATTTGAGAGGGAGGCTCATCAAGGTCCATTTACAGGCCAGGGTCATAAAGGACTATATGAGATCCTAACAACGTAATGCCATGCTCCATTATCTATTCCACCTAGCTAAGTTAGGCTCTTTCACCATTATTGTAGCTCACCATATGTATGCGATGCCCCCTTATCCCTAGCTACTGACTATGGGACACAACTTTCATGGTTCACACATCACAATAGATTTCTCTTGGTGCTGCCGCGCATGCAGGCATTTTTATGGATGGTAAGAGACTATGATCCAACTACTCGCTACAAACAACGATTTATTAGATTTCGTGGACTTAGGCATCGCGATGCAATCATATCACATCTCAACTGGGAGGGTATGGATATTTTGAGGCTTTCACAGTTTTGGTATATTCATAATGATACCATGAGTGCCTGATATCCCTATACAGGATACAAAACACCCATGCTTTAGCACCTAGTATAACGGCCCCAGGTCCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGCAAAGTGGCTTTGTTACCTATTCCGGTAGGAGCCGCAAATTCTTTGGTACATCATAGTCAGGCATTTACGATTCATGTAACGGTATTGATACTCCTTCAAGGGGTTCCATTTTCTCGTAGCTCGCGTTTGATACCGGATAAAGCAAATCAAATCTAATCTTGGGTTTCGTTTCCCTTGTGATGGGCCGGGAAGAGAGGGTAGATGTCAAGTATCCGCTTGCTTGGGATCATGTCTTCTTAAGACTATTTTGGATGGACAATTCCATTTCAGTAGTAAGTAATATGCCTGCCATTTACGGTGGAAAATGCAGTCAGATGTTTGGAGTAGTGTAAGTGATCAAGGGGTAGTAACTCATATTACGGGAGGAAACTTTGCGCAGAGTTCCATCATTACTATTAATGGGAGGCTTCGCAATTTCTTATAGGCACAGGCATGCCAGGTAATTCAGTCTTATGGTTCTTCTTTCTTCATTATCCACATATGGCCCGTTCGTTTTTCCTAGGTGCTCATTTTGGTATGGGCTTTGAGTTTCATCTTTCTATTCTATAGGCGTGGTTATTGGCAAGAACTTATTGAATCCAGCGGTTTGGGCTCATAA

mRNA sequence

ATGACTCCCGCATGGCTAGGCGATCCTACTCACATTGGCCCTAGTGCCCAGATGTGGCGAGCATCTGGAATAACTAGTGAATTACAACTTTATTGTACGGCAATTGGTGCATTAGTCTTTTCAGCCTTAATGCTTTTTGCTGGTTGGTTTCATTATCACAAGGCTGCTTCAAAATTGGCTTGTAAGATCGGGTCTGCTAGGACTTGGGGCTCTTTCTTGGGCGGGACATCAATAAAGCGGAGGGAGCAACCCCATTTTTCACTTGGAATTGGTCAAAGCGGAATTTCTGACTTTTCGCAGAGGATTAGACCCAGTAACAGGTGGTCTATGGTTAACCGATATTGCACTCATTTAGCTATTAGTATTCTTTTCCTAATAGCAGGTCTCATGCTCTTTCACCATTATTGTAGCTCACCATATGTATGCGATGCCCCCTTATCCCTAGCTACTGACTATGGGACACAACTTTCATGGTTCACACATCACAATAGATTTCTCTTGGTGCTGCCGCGCATGCAGGCATTTTTATGGATGGTAAGAGACTATGATCCAACTACTCGCTACAAACAACGATTTATTAGATTTCGTGGACTTAGGCATCGCGATGCAATCATATCACATCTCAACTGGGAGGGTATGGATATTTTGAGGCTTTCACAGTTTTGGATACAAAACACCCATGCTTTAGCACCTAGTATAACGGCCCCAGGTCCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGCAAAGTGGCTTTGTTACCTATTCCGGTAGGAGCCGCAAATTCTTTGGTGCTCATTTTGGTATGGGCTTTGAGTTTCATCTTTCTATTCTATAGGCGTGGTTATTGGCAAGAACTTATTGAATCCAGCGGTTTGGGCTCATAA

Coding sequence (CDS)

ATGACTCCCGCATGGCTAGGCGATCCTACTCACATTGGCCCTAGTGCCCAGATGTGGCGAGCATCTGGAATAACTAGTGAATTACAACTTTATTGTACGGCAATTGGTGCATTAGTCTTTTCAGCCTTAATGCTTTTTGCTGGTTGGTTTCATTATCACAAGGCTGCTTCAAAATTGGCTTGTAAGATCGGGTCTGCTAGGACTTGGGGCTCTTTCTTGGGCGGGACATCAATAAAGCGGAGGGAGCAACCCCATTTTTCACTTGGAATTGGTCAAAGCGGAATTTCTGACTTTTCGCAGAGGATTAGACCCAGTAACAGGTGGTCTATGGTTAACCGATATTGCACTCATTTAGCTATTAGTATTCTTTTCCTAATAGCAGGTCTCATGCTCTTTCACCATTATTGTAGCTCACCATATGTATGCGATGCCCCCTTATCCCTAGCTACTGACTATGGGACACAACTTTCATGGTTCACACATCACAATAGATTTCTCTTGGTGCTGCCGCGCATGCAGGCATTTTTATGGATGGTAAGAGACTATGATCCAACTACTCGCTACAAACAACGATTTATTAGATTTCGTGGACTTAGGCATCGCGATGCAATCATATCACATCTCAACTGGGAGGGTATGGATATTTTGAGGCTTTCACAGTTTTGGATACAAAACACCCATGCTTTAGCACCTAGTATAACGGCCCCAGGTCCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGCAAAGTGGCTTTGTTACCTATTCCGGTAGGAGCCGCAAATTCTTTGGTGCTCATTTTGGTATGGGCTTTGAGTTTCATCTTTCTATTCTATAGGCGTGGTTATTGGCAAGAACTTATTGAATCCAGCGGTTTGGGCTCATAA

Protein sequence

MTPAWLGDPTHIGPSAQMWRASGITSELQLYCTAIGALVFSALMLFAGWFHYHKAASKLACKIGSARTWGSFLGGTSIKRREQPHFSLGIGQSGISDFSQRIRPSNRWSMVNRYCTHLAISILFLIAGLMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHHNRFLLVLPRMQAFLWMVRDYDPTTRYKQRFIRFRGLRHRDAIISHLNWEGMDILRLSQFWIQNTHALAPSITAPGPTTGTSLTWGGGDLVAVGGKVALLPIPVGAANSLVLILVWALSFIFLFYRRGYWQELIESSGLGS

Homology

[Close]

BLAST of CmaCh04G019920 vs. ExPASy Swiss-Prot
Match: Q2QD89 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-56
Identity = 175/441 (39.68%), Postives = 195/441 (44.22%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGIT+ELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITNELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVF+ALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy Swiss-Prot
Match: Q6EW48 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.5e-55
Identity = 171/441 (38.78%), Postives = 194/441 (43.99%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWL DPTHIGPSA                              Q+WRASGITSELQLYCT
Sbjct: 100 AWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVF+ALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYKTNWGIGHDLKDILEAHKGPFTGEGHKGLY 339

Query: 244 ----------------------LMLFHH-YCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                 +++ HH Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLALNLAMLGSLTIVVAHHMYSMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy Swiss-Prot
Match: Q0ZJ20 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Vitis vinifera OX=29760 GN=psaA PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.5e-55
Identity = 174/441 (39.46%), Postives = 195/441 (44.22%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWL DPTHIGPSA                              QMWRASGIT+ELQLYCT
Sbjct: 100 AWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITNELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVF+ALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGLKDILEAHKGPFTGQGHKGLY 339

Query: 244 ----------------------LMLFHH-YCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                 +++ HH Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSLNLAMLGSLTIVVAHHMYSMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy Swiss-Prot
Match: Q0G9W2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.2e-55
Identity = 172/441 (39.00%), Postives = 194/441 (43.99%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWL DPTHIGPSA                              Q+WRASGITSELQLYCT
Sbjct: 100 AWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGAL+F+ALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALIFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPSNR----------WSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS  + + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLDWSKYSDFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYKTNWGIGHGLKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSLNLAMLGSLTIIVAHHMYSMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy Swiss-Prot
Match: Q06FW5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Pelargonium hortorum OX=4031 GN=psaA PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.6e-54
Identity = 173/441 (39.23%), Postives = 194/441 (43.99%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWL DPTHIGPSA                              Q+WRASGITSELQLYCT
Sbjct: 100 AWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVF+ALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS----------------------DFSQRIRP--SNRWSMVNRYCT----- 183
            I Q   +G+                        FS+   P  +  WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFSEGATPLFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHDLKEILEAHKGPFTGQGHKGLY 339

Query: 244 ----------------------LMLFHH-YCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                 +++ HH Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSLNLAMLGSLTIVVAHHMYSMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy TrEMBL
Match: A0A2H4T205 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita maxima OX=3661 GN=psaA PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYTEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy TrEMBL
Match: A0A0S2IFW5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita maxima subsp. andreana OX=61888 GN=psaA PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYTEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy TrEMBL
Match: A0A0S2IFS5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita ecuadorensis OX=184135 GN=psaA PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYTEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy TrEMBL
Match: A0A0S2IFS3 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita moschata OX=3662 GN=psaA PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.4e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. ExPASy TrEMBL
Match: A0A0S2IEI4 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita argyrosperma OX=34294 GN=psaA PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.4e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. NCBI nr
Match: KAG9438620.1 (hypothetical protein H6P81_021443 [Aristolochia fimbriata])

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-57
Identity = 164/384 (42.71%), Postives = 190/384 (49.48%), Query Frame = 0


Query: 4   AWLGDPTHIGPSAQMWRASGITSELQLYCTAIGALVFSALMLFAGWFHYHKAASKLA--- 63
           AWL DPTHIGPSAQ+WRASGITSELQLYCTAIGALVF+ALMLFAGWFHYHKAA KLA   
Sbjct: 202 AWLSDPTHIGPSAQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQ 261

Query: 64  -------------CKIGSARTWG--------------------------SFLGGTSIKRR 123
                          +GS    G                           F+    +  +
Sbjct: 262 DVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLDAGVDPKEIPLPHEFILNRDLLAQ 321

Query: 124 EQPHFSLG----------IGQSGISDFSQRIRPSNR---WSM------------------ 183
             P F+ G          +   GIS FS RIRPSNR   W +                  
Sbjct: 322 LYPSFAEGATPFFHHLELVKIRGISYFSGRIRPSNRGTNWGIGHSLKDILEAHKGPFTGQ 381

Query: 184 -------VNRYCTHLAISILFLIAG---LMLFHH-YCSSPYVCDAPLSLATDYGTQLSWF 243
                  +     H  +S+   + G   +++ HH Y   PY       LATDYGTQLS F
Sbjct: 382 GHKGLYEILTTSWHAQLSLNLAMLGSSTIVVAHHMYSMPPYP-----YLATDYGTQLSLF 441

Query: 244 THH---NRFLLVLPRMQAFLWMVRDYDPTTRYKQRFIRFRGLRHRDAIISHLNW------ 270
           THH     FL+V     A ++MVRDYDPTTRY    +  R LRHRDAIISHLNW      
Sbjct: 442 THHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYND--LLDRVLRHRDAIISHLNWACIFLG 501

[Close]

BLAST of CmaCh04G019920 vs. NCBI nr
Match: YP_009447450.1 (photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 PsaA [Cucurbita ecuadorensis] >ALO22332.1 PsaA [Cucurbita maxima subsp. andreana] >ATY69900.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYTEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. NCBI nr
Match: YP_009447535.1 (photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata] >YP_009505080.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita pepo] >ALO21767.1 PsaA [Cucurbita argyrosperma] >ALO21803.1 PsaA [Cucurbita argyrosperma var. palmeri] >ALO21842.1 PsaA [Cucurbita argyrosperma subsp. sororia] >ALO21919.1 PsaA [Cucurbita cordata] >ALO21989.1 PsaA [Cucurbita digitata] >ALO22130.1 PsaA [Cucurbita ficifolia] >ALO22171.1 PsaA [Cucurbita foetidissima] >ALO22221.1 PsaA [Cucurbita lundelliana] >ALO22468.1 PsaA [Cucurbita okeechobeensis] >ALO22517.1 PsaA [Cucurbita okeechobeensis subsp. martinezii] >ALO22544.1 PsaA [Cucurbita pepo subsp. fraterna] >ALO22638.1 PsaA [Cucurbita pepo subsp. ovifera] >ALO22714.1 PsaA [Cucurbita pepo var. ozarkana] >ALO22742.1 PsaA [Cucurbita pepo subsp. pepo] >ALO22858.1 PsaA [Cucurbita pepo var. texana] >ALO22905.1 PsaA [Cucurbita pedatifolia])

HSP 1 Score: 225.3 bits (573), Expect = 6.9e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. NCBI nr
Match: YP_009751990.1 (photosystem I P700 apoprotein A1 [Cionosicys macranthus] >QIT05231.1 photosystem I P700 apoprotein A1 [Cionosicys macranthus])

HSP 1 Score: 225.3 bits (573), Expect = 6.9e-55
Identity = 178/441 (40.36%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVFSALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFSALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSINLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. NCBI nr
Match: QIT04050.1 (photosystem I P700 apoprotein A1 [Luffa aegyptiaca] >QKX48473.1 photosystem I P700 apoprotein A1 [Luffa acutangula] >QKX48559.1 photosystem I P700 apoprotein A1 [Luffa aegyptiaca])

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-54
Identity = 177/441 (40.14%), Postives = 196/441 (44.44%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWLGDPTHIGPSA                              QMWRASGITSELQLYCT
Sbjct: 100 AWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVF+ALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS    + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDYGTQLS FTHH   
Sbjct: 340 EILTTSWHAQLSLNLAMLGSLTIIVAHHMYAMPPYP-----YLATDYGTQLSLFTHHMWI 399

[Close]

BLAST of CmaCh04G019920 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 209.1 bits (531), Expect = 4.8e-54
Identity = 168/441 (38.10%), Postives = 191/441 (43.31%), Query Frame = 0


Query: 4   AWLGDPTHIGPSA------------------------------QMWRASGITSELQLYCT 63
           AWL DPTHIGPSA                              Q+WRASGITSELQLYCT
Sbjct: 100 AWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCT 159

Query: 64  AIGALVFSALMLFAGWFHYHKAASKLAC-----KIGSARTWGSFLGGTSIKRREQPHFSL 123
           AIGALVF+ALMLFAGWFHYHKAA KLA       + +    G    G+      Q H SL
Sbjct: 160 AIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL 219

Query: 124 GIGQ---SGIS--------------DFSQRIRPS----------NRWSMVNRYCT----- 183
            I Q   +G+               D   ++ PS            WS  + + T     
Sbjct: 220 PINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYSEFLTFRGGL 279

Query: 184 ---------------HLAISILFLIAG--------------------------------- 243
                          HLAI+ILFLIAG                                 
Sbjct: 280 DPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLY 339

Query: 244 -----------------------LMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHH--- 273
                                  ++  H Y   PY       LATDY TQLS FTHH   
Sbjct: 340 EILTTSWHAQLSLNLAMLGSLTIIVAHHMYSMPPYP-----YLATDYATQLSLFTHHMWI 399

HSP 2 Score: 39.3 bits (90), Expect = 6.6e-03
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 0


Query: 276 VWALSFIFLFYRRGYWQELIES 298
           VWA S +FLF  RGYWQELIES
Sbjct: 677 VWAFSLMFLFSGRGYWQELIES 698

[Close]

BLAST of CmaCh04G019920 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-05
Identity = 60/230 (26.09%), Postives = 94/230 (40.87%), Query Frame = 0


Query: 6   LGDPTHIGP-SAQMWR--ASGITSELQLYCTAIGALVFSALMLFAGWFH----------- 65
           L  P  +GP     W   A    S   L+ T+ G+   +A++   G FH           
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGS--GTAILTLLGGFHPQTQSLWLTDM 275

Query: 66  -YHKAASKLACKIGSARTWGSFLGGTSIKRREQPHF----SLGIGQSGISDFSQRIRPSN 125
            +H  A  +   I       +F  G SIK   + H      LG G  G+ D    I  S 
Sbjct: 276 AHHHLAIAILFLIAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYD---TINNSI 335

Query: 126 RWSMVNRYCTHLAISILFLIAGLMLFHHYCSSPYVCDAPLSLATDYGTQLSWFTHHN--- 185
            + +       LA++ L +I  L+  H Y    Y       +A D+ TQ + +THH    
Sbjct: 336 HFQL------GLALASLGVITSLVAQHMYSLPAYA-----FIAQDFTTQAALYTHHQYIA 395

Query: 186 RFLLVLPRMQAFLWMVRDYDPTTRYKQRFIRFRGLRHRDAIISHLNWEGM 214
            F++        ++ +RDY+P     +  +  R L H++AIISHL+W  +
Sbjct: 396 GFIMTGAFAHGAIFFIRDYNP--EQNEDNVLARMLDHKEAIISHLSWASL 427

The following BLAST results are available for this feature:

BLAST of CmaCh04G019920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD89	1.7e-56	39.68	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psa...	[more]
Q6EW48	5.5e-55	38.78	Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA...	[more]
Q0ZJ20	5.5e-55	39.46	Photosystem I P700 chlorophyll a apoprotein A1 OS=Vitis vinifera OX=29760 GN=psa...	[more]
Q0G9W2	7.2e-55	39.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA ...	[more]
Q06FW5	3.6e-54	39.23	Photosystem I P700 chlorophyll a apoprotein A1 OS=Pelargonium hortorum OX=4031 G...	[more]

BLAST of CmaCh04G019920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2H4T205	2.0e-55	40.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita maxima OX=3661 GN=ps...	[more]
A0A0S2IFW5	2.0e-55	40.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita maxima subsp. andrea...	[more]
A0A0S2IFS5	2.0e-55	40.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita ecuadorensis OX=1841...	[more]
A0A0S2IFS3	3.4e-55	40.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0S2IEI4	3.4e-55	40.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita argyrosperma OX=3429...	[more]

BLAST of CmaCh04G019920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG9438620.1	1.1e-57	42.71	hypothetical protein H6P81_021443 [Aristolochia fimbriata]	[more]
YP_009447450.1	4.1e-55	40.36	photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 Ps...	[more]
YP_009447535.1	6.9e-55	40.36	photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata] >YP_00950508...	[more]
YP_009751990.1	6.9e-55	40.36	photosystem I P700 apoprotein A1 [Cionosicys macranthus] >QIT05231.1 photosystem...	[more]
QIT04050.1	1.5e-54	40.14	photosystem I P700 apoprotein A1 [Luffa aegyptiaca] >QKX48473.1 photosystem I P7...	[more]

BLAST of CmaCh04G019920 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00350.1	4.8e-54	38.10	Photosystem I, PsaA/PsaB protein	[more]
ATCG00340.1	3.2e-05	26.09	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 13..68 e-value: 1.5E-12 score: 48.1 coord: 214..272 e-value: 2.3E-7 score: 30.9
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 132..213 e-value: 1.7E-13 score: 51.2 coord: 273..298 e-value: 1.3E-6 score: 28.5
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 4..297
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 17..60 e-value: 6.7E-12 score: 44.5 coord: 122..212 e-value: 1.0E-12 score: 47.1 coord: 275..297 e-value: 8.7E-6 score: 24.3
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 17..60
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 133..211 coord: 220..272
IPR006243	Photosystem I PsaA	PANTHER	PTHR30128:SF60	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 220..272
IPR006243	Photosystem I PsaA	PANTHER	PTHR30128:SF60	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 133..211
IPR006243	Photosystem I PsaA	PANTHER	PTHR30128:SF60	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 17..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G019920.1	CmaCh04G019920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding