Homology
BLAST of CmaCh04G018780 vs. ExPASy Swiss-Prot
Match:
Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)
HSP 1 Score: 760.0 bits (1961), Expect = 2.9e-218
Identity = 364/653 (55.74%), Postives = 486/653 (74.43%), Query Frame = 0
Query: 45 ASVQFISLHSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR 104
+S+ + + CF + C NID+L + HG+L +GL+G++ TKLV +YG G AR
Sbjct: 37 SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 105 MVFDQMRDPDFYAWKVMIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELR 164
+VFDQ+ +PDFY WKVM+R Y LN ++ Y+ + D+I+FS LKAC EL+
Sbjct: 97 LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156
Query: 165 EIDEGRKVHCQIVKVGGPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAG 224
++D G+K+HCQ+VKV D+ VLTGL+DMY KCG+I+ + VF I +NVV WT+MIAG
Sbjct: 157 DLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 225 YVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELS 284
YV+ND EEGLVLFNRMRE+ V N++T G++I ACT+L ALHQGKW HG +K+ IELS
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 285 SFLATAFLDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIR 344
S L T+ LDMYVKCG +AR +F+E +DLV WTAMIVGYT G NEALSLF
Sbjct: 277 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG 336
Query: 345 SGLLPNSVTAASILSACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDA 404
+ PN VT AS+LS C + NL +G SVHGL IK+G+ + V NAL+ MYAKC+ DA
Sbjct: 337 VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDA 396
Query: 405 YVVFLGVLEKDVITWNSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAIL 464
VF EKD++ WNS+ISG++QNGS ++AL LF++M S+S+ P+ +T+ S SA A L
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 456
Query: 465 GAVQLGSSLHAYSIKEG-LFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSA 524
G++ +GSSLHAYS+K G L SS++++GTALL+ YAKCGD +SAR++FD++ +KN ITWSA
Sbjct: 457 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSA 516
Query: 525 MIGGYGVQGDGSGSLAIFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDY 584
MIGGYG QGD GSL +F +MLK+ KPN+ FT++LSAC ++GMV EG KYF SM +DY
Sbjct: 517 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 576
Query: 585 NYAPSMKHYACMVDLLSRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVI 644
N+ PS KHY CMVD+L+R+G LE+ALD I+KMP+QPD+ +GAFLHGCG++SRFDLGE++
Sbjct: 577 NFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIV 636
Query: 645 VREMLELHPNEACLYVLLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVE 697
+++ML+LHP++A YVL+SNLYASDGRW Q EVR+LM +RGL K+ G+S +E
Sbjct: 637 IKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
BLAST of CmaCh04G018780 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-125
Identity = 241/652 (36.96%), Postives = 374/652 (57.36%), Query Frame = 0
Query: 53 HSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRD 112
H + C ++ L + L+ +GL TKLV ++ G V A VF+ +
Sbjct: 38 HPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 113 PDFYAWKVMIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKV 172
+ M++ + + F+ RMR E F+ +LK C + E+ G+++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 173 HCQIVKVG-GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCA 232
H +VK G D F +TGL +MY KC Q+ + VF+ + ++++VSW T++AGY QN A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 233 EEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAF 292
L + M E ++ + T+ S++ A + LR + GK +HGYA+++ + ++TA
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 293 LDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNS 352
+DMY KCG AR +FD + ++VSW +MI Y Q P EA+ +F + G+ P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 353 VTAASILSACSVSGNLSIGMSVHGLGIKLGL-AECAVKNALIDMYAKCHMIDDAYVVFLG 412
V+ L AC+ G+L G +H L ++LGL +V N+LI MY KC +D A +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 413 VLEKDVITWNSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLG 472
+ + +++WN+MI G+ QNG DAL F+QMRS ++ PD T VS ++A A L
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 473 SSLHAYSIKEGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGV 532
+H ++ L N+++ TAL+++YAKCG AR++FD M ++++ TW+AMI GYG
Sbjct: 458 KWIHGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 517
Query: 533 QGDGSGSLAIFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMK 592
G G +L +F +M K +KPN V F +V+SACS+SG+VE G K F M ++Y+ SM
Sbjct: 518 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 577
Query: 593 HYACMVDLLSRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLEL 652
HY MVDLL R+GRL EA DFI +MPV+P +++YGA L C ++ + E + EL
Sbjct: 578 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 637
Query: 653 HPNEACLYVLLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAEWH 703
+P++ +VLL+N+Y + W +V +VR MLR+GL+K PG S+VE E H
Sbjct: 638 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 688
BLAST of CmaCh04G018780 vs. ExPASy Swiss-Prot
Match:
Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)
HSP 1 Score: 426.8 bits (1096), Expect = 5.9e-118
Identity = 217/629 (34.50%), Postives = 369/629 (58.66%), Query Frame = 0
Query: 70 KFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFLND 129
K HG +I G+ + + +T L+ +YG G++ A VFD M D AW ++ N
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 130 MFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIV-KVGGPDSFVLT 189
+ + M E D + +++ C EL + R VH QI K+ D +
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 190 GLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRESLVES 249
L+ MY KCG + S +FE I KN VSWT MI+ Y + + +E+ L F+ M +S +E
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 250 NQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELS-SFLATAFLDMYVKCGQTRDARMI 309
N TL S++++C + + +GK VHG+A++ ++ + L+ A +++Y +CG+ D +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 310 FDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSACSVSGNL 369
+ ++V+W ++I Y G +AL LF + + P++ T AS +SAC +G +
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 370 SIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSMISGYT 429
+G +HG I+ +++ V+N+LIDMY+K +D A VF + + V+TWNSM+ G++
Sbjct: 422 PLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 430 QNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKEGLFSSNL 489
QNG++ +A+ LF+ M L + +T ++ + A + +G+++ G +H I GL +L
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDL 541
Query: 490 YIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKE 549
+ TAL+++YAKCGD +A VF +M ++I++WS+MI YG+ G +++ F+ M++
Sbjct: 542 FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES 601
Query: 550 DLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLSRSGRLEE 609
KPN+V+F VLSAC +SG VEEG KY+ ++ + + +P+ +H+AC +DLLSRSG L+E
Sbjct: 602 GTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 661
Query: 610 ALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVLLSNLYAS 669
A IK+MP D S++G+ ++GC ++ + D+ + I ++ ++ ++ Y LLSN+YA
Sbjct: 662 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAE 721
Query: 670 DGRWGQVNEVRDLMLRRGLKKVPGYSLVE 697
+G W + +R M LKKVPGYS +E
Sbjct: 722 EGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
BLAST of CmaCh04G018780 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 407.9 bits (1047), Expect = 2.8e-112
Identity = 217/637 (34.07%), Postives = 361/637 (56.67%), Query Frame = 0
Query: 63 RNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMI 122
+ +D I+ +G +I L +KL +Y GD+ A VFD+++ W +++
Sbjct: 114 KEVDNFIRGNGFVIDSNL------GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 173
Query: 123 RWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG-G 182
+ F+ I + +M S E D+ FS + K+ LR + G ++H I+K G G
Sbjct: 174 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 233
Query: 183 PDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRM 242
+ V L+ Y K +++ + VF+ + +++V+SW ++I GYV N AE+GL +F +M
Sbjct: 234 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 293
Query: 243 RESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQT 302
S +E + T+ S+ C R + G+ VH +K LDMY KCG
Sbjct: 294 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 353
Query: 303 RDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSAC 362
A+ +F E+ +VS+T+MI GY + G EA+ LF + G+ P+ T ++L+ C
Sbjct: 354 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 413
Query: 363 SVSGNLSIGMSVHGLGIKLGLA-ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 422
+ L G VH + L + V NAL+DMYAKC + +A +VF + KD+I+WN
Sbjct: 414 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 473
Query: 423 SMISGYTQNGSAYDALRLFNQMRSDS-LAPDAITLVSTLSASAILGAVQLGSSLHAYSIK 482
++I GY++N A +AL LFN + + +PD T+ L A A L A G +H Y ++
Sbjct: 474 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 533
Query: 483 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 542
G FS ++ +L+++YAKCG A M+FD + K++++W+ MI GYG+ G G ++A
Sbjct: 534 NGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 593
Query: 543 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLL 602
+F+ M + ++ +++ F ++L ACS+SG+V+EGW++F M + P+++HYAC+VD+L
Sbjct: 594 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 653
Query: 603 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYV 662
+R+G L +A FI+ MP+ PD +++GA L GC ++ L E + ++ EL P YV
Sbjct: 654 ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYV 713
Query: 663 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVE 697
L++N+YA +W QV +R + +RGL+K PG S +E
Sbjct: 714 LMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
BLAST of CmaCh04G018780 vs. ExPASy Swiss-Prot
Match:
Q9FLZ9 (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)
HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-110
Identity = 216/633 (34.12%), Postives = 358/633 (56.56%), Query Frame = 0
Query: 72 HGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFLNDMF 131
H +I G V + T V Y G + AR +F++M ++ ++IR Y ++
Sbjct: 38 HCHVITGGRVSGHILSTLSV-TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLY 97
Query: 132 ANIIPFYNRMRMSFREC--DNIIFSIILKACCELREIDEGRKVHCQIVKVG-GPDSFVLT 191
+ I + RM +C D + + KA EL+ + G VH +I++ G D +V
Sbjct: 98 HDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQN 157
Query: 192 GLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRESLVES 251
L+ MY G++E + VF+ + +++V+SW TMI+GY +N + L++F+ M V+
Sbjct: 158 ALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDL 217
Query: 252 NQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQTRDARMIF 311
+ T+ S++ C L+ L G+ VH + + + A ++MY+KCG+ +AR +F
Sbjct: 218 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 277
Query: 312 DELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSACSVSGNLS 371
D + D+++WT MI GYT+ G AL L G+ PN+VT AS++S C + ++
Sbjct: 278 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 337
Query: 372 IGMSVHGLGIKLGL-AECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSMISGYT 431
G +HG ++ + ++ ++ +LI MYAKC +D + VF G + W+++I+G
Sbjct: 338 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 397
Query: 432 QNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKEGLFSSNL 491
QN DAL LF +MR + + P+ TL S L A A L ++ ++H Y K G F S+L
Sbjct: 398 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG-FMSSL 457
Query: 492 YIGTALLNLYAKCGDAKSARMVFDSMGD----KNIITWSAMIGGYGVQGDGSGSLAIFSD 551
T L+++Y+KCG +SA +F+ + + K+++ W A+I GYG+ GDG +L +F +
Sbjct: 458 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFME 517
Query: 552 MLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLSRSG 611
M++ + PN++ FT+ L+ACS+SG+VEEG F+ M + Y HY C+VDLL R+G
Sbjct: 518 MVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAG 577
Query: 612 RLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVLLSN 671
RL+EA + I +P +P +++GA L C + LGE+ ++ EL P YVLL+N
Sbjct: 578 RLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLAN 637
Query: 672 LYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVE 697
+YA+ GRW + +VR +M GL+K PG+S +E
Sbjct: 638 IYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
BLAST of CmaCh04G018780 vs. ExPASy TrEMBL
Match:
A0A6J1KBI2 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492392 PE=4 SV=1)
HSP 1 Score: 1409.0 bits (3646), Expect = 0.0e+00
Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300
MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300
Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360
TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360
Query: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420
CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN
Sbjct: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420
Query: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480
SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE
Sbjct: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480
Query: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
Query: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600
FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS
Sbjct: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600
Query: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660
RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL
Sbjct: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660
Query: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 699
BLAST of CmaCh04G018780 vs. ExPASy TrEMBL
Match:
A0A6J1GZK8 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458927 PE=4 SV=1)
HSP 1 Score: 1375.5 bits (3559), Expect = 0.0e+00
Identity = 684/700 (97.71%), Postives = 691/700 (98.71%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFANIIPFYNRMRMSF+ECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI-ELSSFLATAFLDMYVKCG 300
MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300
Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILS 360
QTRDARMIFDELP+IDLVSWTAMIVGY+QAGQPNEAL LFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
Query: 361 ACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
ACSVSGNLSIGM VHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
Query: 421 NSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIK 480
NSMISGY Q+GSAYDALRLFNQMRSDSLAPDAITLVS LSASAILGAVQ+GSSLH YSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHVYSIK 480
Query: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
Query: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLL 600
IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGW+YFKSMSQDYNYAPSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600
Query: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYV 660
SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEA LYV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660
Query: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
BLAST of CmaCh04G018780 vs. ExPASy TrEMBL
Match:
A0A5D3DQT2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001190 PE=4 SV=1)
HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 623/700 (89.00%), Postives = 659/700 (94.14%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPR FS L G LL+MGH +SYSTYAS PPLSDL QTM SVQFISLHSC Y MG
Sbjct: 1 MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQM DPDFYAWKV
Sbjct: 61 LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLND+F ++IPFYN MRMSFRECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFV+TGLIDMYGKC Q+ECSSAVFE I+DKNVVSWT+MIAGYVQN+CAEEGLVLFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300
MR++LVESN FTLGSII ACT+LRALHQGKWVHGYAIKN++E SSFLAT FLDMYVKCGQ
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300
Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360
TRDARMIFDELPTIDLVSWTAMIVGYTQA QPN+ L LF D+IRS LLPNSVTAAS+LSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360
Query: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420
CSVSGNL++GMSVHGLGIKLGL ECAVKNALIDMYAKCH I DAYV+F GVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420
Query: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480
SMISGY QNGSAYDALRLFNQMRS SLAPDAITLVSTLSASA LGAVQ+GSSLHAYS+KE
Sbjct: 421 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAVQVGSSLHAYSVKE 480
Query: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
GLFSSNLYIGTALLN YAKCGDAKSAR VFDSMGDKNIITWSAMIGGYGVQGDGSGSL+I
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARTVFDSMGDKNIITWSAMIGGYGVQGDGSGSLSI 540
Query: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600
FSDMLKEDLKPN+VIFTT+LSACS SGMVEEGW+YFKSM QDYN+ PSMKHYACMVDLL+
Sbjct: 541 FSDMLKEDLKPNEVIFTTILSACSSSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600
Query: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660
RSGRL+EALDFIKKMPVQPD+SLYGAFLHGCGLYSRFDLGEV+VREML+LHPNEAC YVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660
Query: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAE 701
LSNLYASDG+WGQVNEVRDLML+RGL KVPGYSLVETNAE
Sbjct: 661 LSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNAE 700
BLAST of CmaCh04G018780 vs. ExPASy TrEMBL
Match:
A0A1S4E1F1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496696 PE=4 SV=1)
HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 622/699 (88.98%), Postives = 658/699 (94.13%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPR FS L G LL+MGH +SYSTYAS PPLSDL QTM SVQFISLHSC Y MG
Sbjct: 1 MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQM DPDFYAWKV
Sbjct: 61 LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLND+F ++IPFYN MRMSFRECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFV+TGLIDMYGKC Q+ECSSAVFE I+DKNVVSWT+MIAGYVQN+CAEEGLVLFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300
MR++LVESN FTLGSII ACT+LRALHQGKWVHGYAIKN++E SSFLAT FLDMYVKCGQ
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300
Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360
TRDARMIFDELPTIDLVSWTAMIVGYTQA QPN+ L LF D+IRS LLPNSVTAAS+LSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360
Query: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420
CSVSGNL++GMSVHGLGIKLGL ECAVKNALIDMYAKCH I DAYV+F GVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420
Query: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480
SMISGY QNGSAYDALRLFNQMRS SLAPDAITLVSTLSASA LGAVQ+GSSLHAYS+KE
Sbjct: 421 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAVQVGSSLHAYSVKE 480
Query: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
GLFSSNLYIGTALLN YAKCGDAKSAR VFDSMGDKNIITWSAMIGGYGVQGDGSGSL+I
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARTVFDSMGDKNIITWSAMIGGYGVQGDGSGSLSI 540
Query: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600
FSDMLKEDLKPN+VIFTT+LSACS SGMVEEGW+YFKSM QDYN+ PSMKHYACMVDLL+
Sbjct: 541 FSDMLKEDLKPNEVIFTTILSACSSSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600
Query: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660
RSGRL+EALDFIKKMPVQPD+SLYGAFLHGCGLYSRFDLGEV+VREML+LHPNEAC YVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660
Query: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
LSNLYASDG+WGQVNEVRDLML+RGL KVPGYSLVETNA
Sbjct: 661 LSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNA 699
BLAST of CmaCh04G018780 vs. ExPASy TrEMBL
Match:
A0A6J1DAW0 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018771 PE=4 SV=1)
HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 605/701 (86.31%), Postives = 649/701 (92.58%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRF SL R FSRLAG L+E+G ++ STY QP LS+LDQTMASVQFISL+S FY MG
Sbjct: 1 MLQRFLSLRRSFSRLAGSLIELG-NMYCSTYPPQPQLSELDQTMASVQFISLNSSFYLMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDV SAR+VFDQM D DFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVDSARLVFDQMPDRDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFA+IIPFYN MRMSF E DNIIFSIILKAC ELREI EGRKVH QIVKVG
Sbjct: 121 MIRWYFLNDMFADIIPFYNSMRMSFTESDNIIFSIILKACSELREIVEGRKVHGQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGL+DMY KCGQIECS AVFEGIIDKNVVSWT+MIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLVDMYAKCGQIECSCAVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300
MR +LVESNQFTLGSIITACT+LRALHQGKWVHGYAIKNV++LS+FL T FLDMYVKCGQ
Sbjct: 241 MRAALVESNQFTLGSIITACTKLRALHQGKWVHGYAIKNVVKLSAFLTTTFLDMYVKCGQ 300
Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360
TRDAR++FDELPTID VSWTAMIVGYTQAGQPNEAL LF +IRS LLPNSVTAA++LS+
Sbjct: 301 TRDARIMFDELPTIDRVSWTAMIVGYTQAGQPNEALRLFAGEIRSDLLPNSVTAATVLSS 360
Query: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420
CSVSGNL++GMSVHGLGIKLGL EC VKNALIDMYAKCHMID+AYV+F GVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECGVKNALIDMYAKCHMIDEAYVIFHGVLEKDVITWN 420
Query: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480
SMISGY QNG+A +AL LFNQMRS S APDAITLVS LSASA LGAV +GSSLHAYSIK
Sbjct: 421 SMISGYAQNGTANEALLLFNQMRSSSAAPDAITLVSALSASATLGAVHVGSSLHAYSIKV 480
Query: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
GLFS NLYIGT LLN YAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSLNLYIGTTLLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
Query: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600
FSDMLKED+KPN+VIFTTVLSACSYSGMV EGW+YFKSMSQDYN+ PSMKHYACMVDLL+
Sbjct: 541 FSDMLKEDVKPNEVIFTTVLSACSYSGMVAEGWRYFKSMSQDYNFMPSMKHYACMVDLLA 600
Query: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660
RSGRL+EALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEV+V+EML+LHP+EAC YVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVKEMLQLHPDEACYYVL 660
Query: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAEW 702
LSNLYASDGRWGQVN+VR+LM +RGL K PGYSLVET+A++
Sbjct: 661 LSNLYASDGRWGQVNQVRELMQQRGLNKDPGYSLVETDADF 700
BLAST of CmaCh04G018780 vs. NCBI nr
Match:
KAG6601646.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 729/818 (89.12%), Postives = 744/818 (90.95%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPRIFSRLAGPLLEMGHHI YSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1 MLQRFFSLPRIFSRLAGPLLEMGHHIFYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFANIIPFYNRMRMSF+ECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNV-IELSSFLATAFLDMYVKCG 300
MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNV IEL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILS 360
QTRDARMIFDELP+IDLVSWTAMIVGY+QAGQPN+AL LFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNDALRLFTDKIRSGLLPNSVTAASILS 360
Query: 361 ACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
ACSVSGNLSIGM VHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
Query: 421 NSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIK 480
NSMISGY Q+GSAYDALRLFNQM+SDSLAPDAITLVS LSASAILGAVQ+GSSLHAYSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMKSDSLAPDAITLVSALSASAILGAVQVGSSLHAYSIK 480
Query: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
Query: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLL 600
IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGW+YFKSMSQDYNY PSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYVPSMKHYACMVDLL 600
Query: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYV 660
SRSGRLEEAL+FIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEAC YV
Sbjct: 601 SRSGRLEEALEFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACFYV 660
Query: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAEWHPPGLIGQTYYSDIVNSK 720
LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA GLIGQTYYSDIVNS
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA-----GLIGQTYYSDIVNS- 720
Query: 721 KREIDCNLLKALHCGGLMFYDSEWQRLPFTSLTGLQTVKIKLTKQQLEFLCGINSSVVEL 780
KR++ C +L L Q + T LT
Sbjct: 721 KRKVFCLILLLLD-----------QNVLLTLLT--------------------------- 768
Query: 781 RKIWNLSLIIHINSCRVDQRTPKDHTEGNGDEQPSIIQ 818
SL+ N RVDQRTPKDHTEGNGDEQPSIIQ
Sbjct: 781 ------SLMEKTNRLRVDQRTPKDHTEGNGDEQPSIIQ 768
BLAST of CmaCh04G018780 vs. NCBI nr
Match:
XP_022997487.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997497.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997504.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997514.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997519.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997526.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997533.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima])
HSP 1 Score: 1409.0 bits (3646), Expect = 0.0e+00
Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300
MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300
Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360
TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360
Query: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420
CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN
Sbjct: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420
Query: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480
SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE
Sbjct: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480
Query: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
Query: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600
FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS
Sbjct: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600
Query: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660
RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL
Sbjct: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660
Query: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 699
BLAST of CmaCh04G018780 vs. NCBI nr
Match:
KAG7032406.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1375.5 bits (3559), Expect = 0.0e+00
Identity = 682/700 (97.43%), Postives = 692/700 (98.86%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFANIIPFYNRMRMSF+ECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNV-IELSSFLATAFLDMYVKCG 300
MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNV IEL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILS 360
QTRDARMIFDELP+IDLVSWTAMIVGY+QAGQPN+AL LFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNDALRLFTDKIRSGLLPNSVTAASILS 360
Query: 361 ACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
ACSVSGNLSIGM VHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
Query: 421 NSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIK 480
NSMISGY Q+GSAYDALRLFNQM+SDSLAPDAITLVS LSASAILGAVQ+GSSLHAYSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMKSDSLAPDAITLVSALSASAILGAVQVGSSLHAYSIK 480
Query: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
Query: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLL 600
IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGW+YFKSMSQDYNYAPSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600
Query: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYV 660
SRSGRLEEAL+FIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEAC YV
Sbjct: 601 SRSGRLEEALEFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACFYV 660
Query: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
BLAST of CmaCh04G018780 vs. NCBI nr
Match:
XP_022957571.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957572.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957573.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957574.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957575.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957577.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957578.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata])
HSP 1 Score: 1375.5 bits (3559), Expect = 0.0e+00
Identity = 684/700 (97.71%), Postives = 691/700 (98.71%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFANIIPFYNRMRMSF+ECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI-ELSSFLATAFLDMYVKCG 300
MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300
Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILS 360
QTRDARMIFDELP+IDLVSWTAMIVGY+QAGQPNEAL LFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
Query: 361 ACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
ACSVSGNLSIGM VHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
Query: 421 NSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIK 480
NSMISGY Q+GSAYDALRLFNQMRSDSLAPDAITLVS LSASAILGAVQ+GSSLH YSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHVYSIK 480
Query: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
Query: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLL 600
IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGW+YFKSMSQDYNYAPSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600
Query: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYV 660
SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEA LYV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660
Query: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
BLAST of CmaCh04G018780 vs. NCBI nr
Match:
XP_023540052.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540134.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540211.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540287.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1368.6 bits (3541), Expect = 0.0e+00
Identity = 681/700 (97.29%), Postives = 690/700 (98.57%), Query Frame = 0
Query: 1 MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
MLQRFFSLPRIFSRLAGPLLEMGHH+SYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1 MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
Query: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61 LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
Query: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180
MIRWYFLNDMFA+IIPFYNRMRMSF+ECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
Query: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
GPDSFVLTGLIDMYGKCGQIE SSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNV-IELSSFLATAFLDMYVKCG 300
MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNV IEL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILS 360
QTRDA MIFDELP+IDLVSWTAMIVGY+QAGQPNEAL LFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
Query: 361 ACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
ACSVSGNLSIGM VHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
Query: 421 NSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIK 480
NSMISGY Q+GSAYDALRLFNQMRSDSLAPDAITLVS LSASAILGAVQ+GSSLHAYSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHAYSIK 480
Query: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
Query: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLL 600
IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGW+YFKSMSQDYNYAPSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600
Query: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYV 660
SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEA LYV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660
Query: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNA 700
BLAST of CmaCh04G018780 vs. TAIR 10
Match:
AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 760.0 bits (1961), Expect = 2.1e-219
Identity = 364/653 (55.74%), Postives = 486/653 (74.43%), Query Frame = 0
Query: 45 ASVQFISLHSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR 104
+S+ + + CF + C NID+L + HG+L +GL+G++ TKLV +YG G AR
Sbjct: 37 SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 105 MVFDQMRDPDFYAWKVMIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELR 164
+VFDQ+ +PDFY WKVM+R Y LN ++ Y+ + D+I+FS LKAC EL+
Sbjct: 97 LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156
Query: 165 EIDEGRKVHCQIVKVGGPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAG 224
++D G+K+HCQ+VKV D+ VLTGL+DMY KCG+I+ + VF I +NVV WT+MIAG
Sbjct: 157 DLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 225 YVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELS 284
YV+ND EEGLVLFNRMRE+ V N++T G++I ACT+L ALHQGKW HG +K+ IELS
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 285 SFLATAFLDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIR 344
S L T+ LDMYVKCG +AR +F+E +DLV WTAMIVGYT G NEALSLF
Sbjct: 277 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG 336
Query: 345 SGLLPNSVTAASILSACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDA 404
+ PN VT AS+LS C + NL +G SVHGL IK+G+ + V NAL+ MYAKC+ DA
Sbjct: 337 VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDA 396
Query: 405 YVVFLGVLEKDVITWNSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAIL 464
VF EKD++ WNS+ISG++QNGS ++AL LF++M S+S+ P+ +T+ S SA A L
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 456
Query: 465 GAVQLGSSLHAYSIKEG-LFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSA 524
G++ +GSSLHAYS+K G L SS++++GTALL+ YAKCGD +SAR++FD++ +KN ITWSA
Sbjct: 457 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSA 516
Query: 525 MIGGYGVQGDGSGSLAIFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDY 584
MIGGYG QGD GSL +F +MLK+ KPN+ FT++LSAC ++GMV EG KYF SM +DY
Sbjct: 517 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 576
Query: 585 NYAPSMKHYACMVDLLSRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVI 644
N+ PS KHY CMVD+L+R+G LE+ALD I+KMP+QPD+ +GAFLHGCG++SRFDLGE++
Sbjct: 577 NFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIV 636
Query: 645 VREMLELHPNEACLYVLLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVE 697
+++ML+LHP++A YVL+SNLYASDGRW Q EVR+LM +RGL K+ G+S +E
Sbjct: 637 IKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
BLAST of CmaCh04G018780 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 452.6 bits (1163), Expect = 7.1e-127
Identity = 241/652 (36.96%), Postives = 374/652 (57.36%), Query Frame = 0
Query: 53 HSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRD 112
H + C ++ L + L+ +GL TKLV ++ G V A VF+ +
Sbjct: 38 HPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 113 PDFYAWKVMIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKV 172
+ M++ + + F+ RMR E F+ +LK C + E+ G+++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 173 HCQIVKVG-GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCA 232
H +VK G D F +TGL +MY KC Q+ + VF+ + ++++VSW T++AGY QN A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 233 EEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAF 292
L + M E ++ + T+ S++ A + LR + GK +HGYA+++ + ++TA
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 293 LDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNS 352
+DMY KCG AR +FD + ++VSW +MI Y Q P EA+ +F + G+ P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 353 VTAASILSACSVSGNLSIGMSVHGLGIKLGL-AECAVKNALIDMYAKCHMIDDAYVVFLG 412
V+ L AC+ G+L G +H L ++LGL +V N+LI MY KC +D A +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 413 VLEKDVITWNSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLG 472
+ + +++WN+MI G+ QNG DAL F+QMRS ++ PD T VS ++A A L
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 473 SSLHAYSIKEGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGV 532
+H ++ L N+++ TAL+++YAKCG AR++FD M ++++ TW+AMI GYG
Sbjct: 458 KWIHGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 517
Query: 533 QGDGSGSLAIFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMK 592
G G +L +F +M K +KPN V F +V+SACS+SG+VE G K F M ++Y+ SM
Sbjct: 518 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 577
Query: 593 HYACMVDLLSRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLEL 652
HY MVDLL R+GRL EA DFI +MPV+P +++YGA L C ++ + E + EL
Sbjct: 578 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 637
Query: 653 HPNEACLYVLLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAEWH 703
+P++ +VLL+N+Y + W +V +VR MLR+GL+K PG S+VE E H
Sbjct: 638 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 688
BLAST of CmaCh04G018780 vs. TAIR 10
Match:
AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 426.8 bits (1096), Expect = 4.2e-119
Identity = 217/629 (34.50%), Postives = 369/629 (58.66%), Query Frame = 0
Query: 70 KFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFLND 129
K HG +I G+ + + +T L+ +YG G++ A VFD M D AW ++ N
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 130 MFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIV-KVGGPDSFVLT 189
+ + M E D + +++ C EL + R VH QI K+ D +
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 190 GLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRESLVES 249
L+ MY KCG + S +FE I KN VSWT MI+ Y + + +E+ L F+ M +S +E
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 250 NQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELS-SFLATAFLDMYVKCGQTRDARMI 309
N TL S++++C + + +GK VHG+A++ ++ + L+ A +++Y +CG+ D +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 310 FDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSACSVSGNL 369
+ ++V+W ++I Y G +AL LF + + P++ T AS +SAC +G +
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 370 SIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSMISGYT 429
+G +HG I+ +++ V+N+LIDMY+K +D A VF + + V+TWNSM+ G++
Sbjct: 422 PLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 430 QNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKEGLFSSNL 489
QNG++ +A+ LF+ M L + +T ++ + A + +G+++ G +H I GL +L
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDL 541
Query: 490 YIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKE 549
+ TAL+++YAKCGD +A VF +M ++I++WS+MI YG+ G +++ F+ M++
Sbjct: 542 FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES 601
Query: 550 DLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLSRSGRLEE 609
KPN+V+F VLSAC +SG VEEG KY+ ++ + + +P+ +H+AC +DLLSRSG L+E
Sbjct: 602 GTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 661
Query: 610 ALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVLLSNLYAS 669
A IK+MP D S++G+ ++GC ++ + D+ + I ++ ++ ++ Y LLSN+YA
Sbjct: 662 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAE 721
Query: 670 DGRWGQVNEVRDLMLRRGLKKVPGYSLVE 697
+G W + +R M LKKVPGYS +E
Sbjct: 722 EGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
BLAST of CmaCh04G018780 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 407.9 bits (1047), Expect = 2.0e-113
Identity = 217/637 (34.07%), Postives = 361/637 (56.67%), Query Frame = 0
Query: 63 RNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMI 122
+ +D I+ +G +I L +KL +Y GD+ A VFD+++ W +++
Sbjct: 114 KEVDNFIRGNGFVIDSNL------GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 173
Query: 123 RWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG-G 182
+ F+ I + +M S E D+ FS + K+ LR + G ++H I+K G G
Sbjct: 174 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 233
Query: 183 PDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRM 242
+ V L+ Y K +++ + VF+ + +++V+SW ++I GYV N AE+GL +F +M
Sbjct: 234 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 293
Query: 243 RESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQT 302
S +E + T+ S+ C R + G+ VH +K LDMY KCG
Sbjct: 294 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 353
Query: 303 RDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSAC 362
A+ +F E+ +VS+T+MI GY + G EA+ LF + G+ P+ T ++L+ C
Sbjct: 354 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 413
Query: 363 SVSGNLSIGMSVHGLGIKLGLA-ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 422
+ L G VH + L + V NAL+DMYAKC + +A +VF + KD+I+WN
Sbjct: 414 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 473
Query: 423 SMISGYTQNGSAYDALRLFNQMRSDS-LAPDAITLVSTLSASAILGAVQLGSSLHAYSIK 482
++I GY++N A +AL LFN + + +PD T+ L A A L A G +H Y ++
Sbjct: 474 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 533
Query: 483 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 542
G FS ++ +L+++YAKCG A M+FD + K++++W+ MI GYG+ G G ++A
Sbjct: 534 NGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 593
Query: 543 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLL 602
+F+ M + ++ +++ F ++L ACS+SG+V+EGW++F M + P+++HYAC+VD+L
Sbjct: 594 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 653
Query: 603 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYV 662
+R+G L +A FI+ MP+ PD +++GA L GC ++ L E + ++ EL P YV
Sbjct: 654 ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYV 713
Query: 663 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVE 697
L++N+YA +W QV +R + +RGL+K PG S +E
Sbjct: 714 LMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
BLAST of CmaCh04G018780 vs. TAIR 10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 401.4 bits (1030), Expect = 1.9e-111
Identity = 214/615 (34.80%), Postives = 352/615 (57.24%), Query Frame = 0
Query: 91 VGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFLNDMFANIIPFYNRMR-MSFRECD 150
+ ++ G++ A VF +M + + ++W V++ Y F + Y+RM + + D
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 151 NIIFSIILKACCELREIDEGRKVHCQIVKVGGP-DSFVLTGLIDMYGKCGQIECSSAVFE 210
F +L+ C + ++ G++VH +V+ G D V+ LI MY KCG ++ + +F+
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 211 GIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQ 270
+ ++++SW MI+GY +N EGL LF MR V+ + TL S+I+AC L
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 271 GKWVHGYAIKNVIELSSFLATAFLDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQ 330
G+ +H Y I + + + MY+ G R+A +F + D+VSWT MI GY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 331 AGQPNEALSLFTDKIRSGLLPNSVTAASILSACSVSGNLSIGMSVHGLGIKLGL-AECAV 390
P++A+ + + + P+ +T A++LSAC+ G+L G+ +H L IK L + V
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 391 KNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSMISGYTQNGSAYDALRLFNQMRSDSL 450
N LI+MY+KC ID A +F + K+VI+W S+I+G N ++AL QM+ +L
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TL 495
Query: 451 APDAITLVSTLSASAILGAVQLGSSLHAYSIKEGLFSSNLYIGTALLNLYAKCGDAKSAR 510
P+AITL + L+A A +GA+ G +HA+ ++ G+ + ++ ALL++Y +CG +A
Sbjct: 496 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD-FLPNALLDMYVRCGRMNTAW 555
Query: 511 MVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDLKPNDVIFTTVLSACSYSG 570
F+S K++ +W+ ++ GY +G GS + +F M+K ++P+++ F ++L CS S
Sbjct: 556 SQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ 615
Query: 571 MVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLSRSGRLEEALDFIKKMPVQPDISLYGAF 630
MV +G YF M +DY P++KHYAC+VDLL R+G L+EA FI+KMPV PD +++GA
Sbjct: 616 MVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 675
Query: 631 LHGCGLYSRFDLGEVIVREMLELHPNEACLYVLLSNLYASDGRWGQVNEVRDLMLRRGLK 690
L+ C ++ + DLGE+ + + EL Y+LL NLYA G+W +V +VR +M GL
Sbjct: 676 LNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 735
Query: 691 KVPGYSLVETNAEWH 703
G S VE + H
Sbjct: 736 VDAGCSWVEVKGKVH 746
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9ZQ74 | 2.9e-218 | 55.74 | Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... | [more] |
Q3E6Q1 | 1.0e-125 | 36.96 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9C507 | 5.9e-118 | 34.50 | Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... | [more] |
Q9SN39 | 2.8e-112 | 34.07 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9FLZ9 | 2.6e-110 | 34.12 | Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KBI2 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit... | [more] |
A0A6J1GZK8 | 0.0e+00 | 97.71 | pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit... | [more] |
A0A5D3DQT2 | 0.0e+00 | 89.00 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4E1F1 | 0.0e+00 | 88.98 | pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis ... | [more] |
A0A6J1DAW0 | 0.0e+00 | 86.31 | pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X1 ... | [more] |
Match Name | E-value | Identity | Description | |
KAG6601646.1 | 0.0e+00 | 89.12 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022997487.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ... | [more] |
KAG7032406.1 | 0.0e+00 | 97.43 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022957571.1 | 0.0e+00 | 97.71 | pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ... | [more] |
XP_023540052.1 | 0.0e+00 | 97.29 | pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
AT2G03380.1 | 2.1e-219 | 55.74 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 7.1e-127 | 36.96 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G69350.1 | 4.2e-119 | 34.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 2.0e-113 | 34.07 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G15510.1 | 1.9e-111 | 34.80 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |