CmaCh04G016930 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGTACAGTTCTTCTGCTTTTCCGCGTCGCCTCCCGTCAATCTGTTACGGATTCTCAATTTTATCTGTGTTTAAGGATCGTACACGCTGATAATCGTCAAGAACAAAAACCACAATTTCGCTTGCGTTTCATATTTTCTTCCTGCTTCGGATTTCCTCTTCCAATTTTCAGGTACACTCATTTTCCCCTTCTCGATGGTTTTCGTTGAACGGTCTATTTCCAGTTCATTGCTTTGGTGATTCATCTTTTTGTTGAACTTATATTCGTATTTACACTGCATTTCTGTGATTTTTCTCTCCTTTTGAACCCTCATTTTCCGTTCTTATGTTTTATCTGTATCGTTATCGGTTAATTGCTAGGAATATCGGTTGTCGCTTAGCTTTCGATCCCTAATTCTACGTTTGAATTGCATTCTGCATTCTTATTTCCAGTTGCTTTTTGTTAGTCTTTATATGGTAGAATGGTAGTGTTATTTTGTATTGTTACTGCGAATCTATTGTCCTCCCGGAGTCCTGTTTCTATCGAAATTGTTGGCATTACGGCCTTTTTCCTAAATATTCTCACTACTATTTTACAGGTACGAGTTATATTCATCAGATCCTTGTTTGAGAGCCGCTTACCGGATAGTTTATTAGAATTCAAGAATTTCTTTGTAGAGCCAGGATGTTTAGTTTCATGAAATCCCCCGCGAAAGTTACTAAGCAGAATTCTGTAGACGAATTATCAGGCGGATCTGGCACTAATCCTTTTGATTCAGATTCTGGGCCTGAAGCCAAACAAACTCTTAATGCTGCAAGAAGAACTTCTTCTGAGCCTGTGCTCGTTATACCTAACTCCATTTCCGCCAACGCTTTTGATGATGATGATGATGATGGATTTGTTGGAAAAAGAGGGACTGCAACTTCTGCAGCCTCTAAAGACAGGTACAAAAATGATTTTCGTGACTCAGGAGGACTCGAGAACCAAAGTGTGCAGGAATTGGAGAATTATGCTCTGTATAAAGCAGAGGAGACCACAAAATCTGTTAACAATTGCTTGAAGATTGCTGAGGACATAAGGGAAGATGCTACCAAGACCCTTGACATGTTGCATCAGCAGGGTGAGCAAATTGAGAGGACCCACAGGATGGCTGCTGATATGGATAAAGATTTAAGCAAGGTAAGCTCTTTTCGAGTTTTGATCAGACACCTTGCGGATGTATTTCTATCCTATGTTGTTATTCCTGAAATTATTAGTTGGCTCATGTTGATCTGATATAATTAAAAACAGAATCAGATTATTCAAAACTTTAAAGTTAGCAGTTATGAAATATTTGGCTTGCAAGTTACGATGCGATTAGGTTGTGGATGTCCTACTCTGTAAGTGATGGAAGATGTTCGAGAGCAAAGAACCTTTTTGTTTGCTAGGAATTTGTTAAGCAAGCCAGAAATGATTGAGGTTTTCACTTGCTTTTTCGTTTTTTATGTATGCATTTTTTATGATCCTTTGATTGCTCCTCCATGTGTTGTCAATGGTTTCTTATTCATTATTGTTAATGACAGGGTGAGAAACTTCTGAATAATCTGGGAGGCATGTTCTCAAAGCCATGGAAGCCAAAGAAGACCAAAGAAATTACAGGCCCTCTTATAACAGCAGGTTATATTTTCACTGGTTCTTGTAACTTACTGCCTCTTCCATTTTATCTGGCTATTAATTATGTCGGCTGTTCAGATCATTCCTCTGGGCGAACTGAAAACAACAAGGAGCAAAGGGAAAAACTCGGTGTATCTACGGGCAAAAAACAGTCGGCGACTAAAACACCACCCTCTGAACCAACAGGTGCAATACAAAAAGTTGAGGTGAGAGCGTCGGCCGTTATCATTTCACTATCTTAAAGAGTATAACATTATCATGGATTCAAATTTAACCAATATCTAAGAATGTTAACTCAGGCTCAGAAGGAAATGCAAGATGATGCACTCTCAGATTTAAGTAATATCTTGGGTGATCTGAAGAGTATGGCTGTGGACATGGGAAGCGAGCTTGACAGGTCATACATGTCTACCTCTTTTCTCAATCTAGATATTGTTGTATTATAACTCATCAATCTGTTGGCTTATTACATAGTTCTGAATGGTTACTACTCTCTGGAAAATGCAGGCAAAACAAAGCTCTTGATCATCTAAGCGACGATGTCGACGAGCTGAATTCTAGAGTGAAGGGTGCCAATCAGCGGGCTCGTCATTTGGTTGGGAAGTAAATCCTGCCTCTTCCTTCTGTTTGTTTCTAGCTGGAAGCATTTCGATCAAGCATTCTTTAATTGTTGGTATACTATTATTTTCTCATGTGGTTTTATAAGGTTGCAATAAGTACACAACTTTGATTCTATTCTTTCAATGAAAAAGCTTATCCCTTCATCTTGATGTAGATAGATACTAGGAGCTGAACATTAGCTGCTAACGTTTTCTTGACTAAGCTAATGGAAGATAAAGCCAGTTCAAAAGAGAAAAGGGAAGAAGTAAAAGAAACTCAATTGGGGCTTTTACATACATAGATTTCCACAGATTCTAGCAAAATTACATTAACTCCATAAACAGTAAACTAGAAATGAAAGTTCCATAGTGCCCCTCCCAATGAAGGAAACCTCATGAATCCTGCTCTGTTGACATTTTGTACCTTATGCCTCCAAAATTAATGAGACTCATGGGTTTCTTTTGAATCTCGCCTCCGAACCCCGACACCTATGACCAAATTCTTTTTTAAGTGTATAAAAAATCCAAATCTTAAAGTAAATACCTTGCCATTTCCATGCTTGTTTTTGCCAGTTTTCACATCAAAATGAACTCCAACGTTCGCCTCCTCTCAATGCTCGAACTTTTAAGCCACCAAAACTCGAACGCTTCGACGCAAAAACAAGAATGGAAATAGCAACAATAACCTGAAACAAGAAAGAAAAACAAGACAAGATGACATTGGACAAAACTTGTCAACTAATTAGCGTAGCCTTCTTCTGCCTTTGGTCATGCACGAAGATTAAATATTCTTCTTGATCCTTAACTGTAATAGGACTCAAGAAAAAAAAGGGACGTGCATGATATACTACTGGAATAATAGCAAGAAAACTGAGAAGGGAAAGGGATAAAATGGCTGTGTTCTGCTAAAAAAAAGATTCTTTTTGCTCGTTCTGTGCTTTCTTTTTCTCTTGTTCAGTTGTGAAGAGGGTTTGGCCCCGAGGGCACGAGTCTCTTCTCGACGCCATATCGGGGGTCAATCTCATTGTGTGTCAGCATCGGCGGGACATGAACAGGTAGGTGGTGTTGGTAAACTCTATAAAGGTGAATACACAAAGAACGTGAGTTTTCCTGGGTTAGAGCATCACAAGGATGAAGCTGCTGCAGTTCACGGTGAGGCAGTGGGTGGCTAGAGGTGGTCGGAGAAGCGTCTGGCACATGGGTGGAAGGTGGATAACCGGAGAGTCTGGTGGCAGATGAGTTGACAAAGACGAGTAGAAGCATCGATATCATCATGAAGAGCTGGGCATTGGTGACAGAAGACGATGTACAGGGGGGAGAGAGGGAGGCTTTCATTGTCGAGTTCTGATAGAGAGAGAGAAGGGCGGGGAAGAAAGGAGATAAAAGAGAGGAGATGGTGATAGGGAAAGGGAAG GCGTACAGTTCTTCTGCTTTTCCGCGTCGCCTCCCGTCAATCTGTTACGGATTCTCAATTTTATCTGTGTTTAAGGATCGTACACGCTGATAATCGTCAAGAACAAAAACCACAATTTCGCTTGCGTTTCATATTTTCTTCCTGCTTCGGATTTCCTCTTCCAATTTTCAGGTACGAGTTATATTCATCAGATCCTTGTTTGAGAGCCGCTTACCGGATAGTTTATTAGAATTCAAGAATTTCTTTGTAGAGCCAGGATGTTTAGTTTCATGAAATCCCCCGCGAAAGTTACTAAGCAGAATTCTGTAGACGAATTATCAGGCGGATCTGGCACTAATCCTTTTGATTCAGATTCTGGGCCTGAAGCCAAACAAACTCTTAATGCTGCAAGAAGAACTTCTTCTGAGCCTGTGCTCGTTATACCTAACTCCATTTCCGCCAACGCTTTTGATGATGATGATGATGATGGATTTGTTGGAAAAAGAGGGACTGCAACTTCTGCAGCCTCTAAAGACAGGTACAAAAATGATTTTCGTGACTCAGGAGGACTCGAGAACCAAAGTGTGCAGGAATTGGAGAATTATGCTCTGTATAAAGCAGAGGAGACCACAAAATCTGTTAACAATTGCTTGAAGATTGCTGAGGACATAAGGGAAGATGCTACCAAGACCCTTGACATGTTGCATCAGCAGGGTGAGCAAATTGAGAGGACCCACAGGATGGCTGCTGATATGGATAAAGATTTAAGCAAGGGTGAGAAACTTCTGAATAATCTGGGAGGCATGTTCTCAAAGCCATGGAAGCCAAAGAAGACCAAAGAAATTACAGGCCCTCTTATAACAGCAGATCATTCCTCTGGGCGAACTGAAAACAACAAGGAGCAAAGGGAAAAACTCGGTGTATCTACGGGCAAAAAACAGTCGGCGACTAAAACACCACCCTCTGAACCAACAGGTGCAATACAAAAAGTTGAGGCTCAGAAGGAAATGCAAGATGATGCACTCTCAGATTTAAGTAATATCTTGGGTGATCTGAAGAGTATGGCTGTGGACATGGGAAGCGAGCTTGACAGGCAAAACAAAGCTCTTGATCATCTAAGCGACGATGTCGACGAGCTGAATTCTAGAGTGAAGGGTGCCAATCAGCGGGCTCGTCATTTGGTTGGGAAGTAAATCCTGCCTCTTCCTTCTGTTTGTTTCTAGCTGGAAGCATTTCGATCAAGCATTCTTTAATTGTTGGTATACTATTATTTTCTCATGTGGTTTTATAAGGTTGCAATAAGTACACAACTTTGATTCTATTCTTTCAATGAAAAAGCTTATCCCTTCATCTTGATGTAGATAGATACTAGGAGCTGAACATTAGCTGCTAACGTTTTCTTGACTAAGCTAATGGAAGATAAAGCCAGTTCAAAAGAGAAAAGGGAAGAAGTAAAAGAAACTCAATTGGGGCTTTTACATACATAGATTTCCACAGATTCTAGCAAAATTACATTAACTCCATAAACAGTAAACTAGAAATGAAAGTTCCATAGTGCCCCTCCCAATGAAGGAAACCTCATGAATCCTGCTCTGTTGACATTTTGTACCTTATGCCTCCAAAATTAATGAGACTCATGGGTTTCTTTTGAATCTCGCCTCCGAACCCCGACACCTATGACCAAATTCTTTTTTAAGTGTATAAAAAATCCAAATCTTAAAGTAAATACCTTGCCATTTCCATGCTTGTTTTTGCCAGTTTTCACATCAAAATGAACTCCAACGTTCGCCTCCTCTCAATGCTCGAACTTTTAAGCCACCAAAACTCGAACGCTTCGACGCAAAAACAAGAATGGAAATAGCAACAATAACCTGAAACAAGAAAGAAAAACAAGACAAGATGACATTGGACAAAACTTGTCAACTAATTAGCGTAGCCTTCTTCTGCCTTTGGTCATGCACGAAGATTAAATATTCTTCTTGATCCTTAACTGTAATAGGACTCAAGAAAAAAAAGGGACGTGCATGATATACTACTGGAATAATAGCAAGAAAACTGAGAAGGGAAAGGGATAAAATGGCTGTGTTCTGCTAAAAAAAAGATTCTTTTTGCTCGTTCTGTGCTTTCTTTTTCTCTTGTTCAGTTGTGAAGAGGGTTTGGCCCCGAGGGCACGAGTCTCTTCTCGACGCCATATCGGGGGTCAATCTCATTGTGTGTCAGCATCGGCGGGACATGAACAGGTAGGTGGTGTTGGTAAACTCTATAAAGGTGAATACACAAAGAACGTGAGTTTTCCTGGGTTAGAGCATCACAAGGATGAAGCTGCTGCAGTTCACGGTGAGGCAGTGGGTGGCTAGAGGTGGTCGGAGAAGCGTCTGGCACATGGGTGGAAGGTGGATAACCGGAGAGTCTGGTGGCAGATGAGTTGACAAAGACGAGTAGAAGCATCGATATCATCATGAAGAGCTGGGCATTGGTGACAGAAGACGATGTACAGGGGGGAGAGAGGGAGGCTTTCATTGTCGAGTTCTGATAGAGAGAGAGAAGGGCGGGGAAGAAAGGAGATAAAAGAGAGGAGATGGTGATAGGGAAAGGGAAG ATGTTTAGTTTCATGAAATCCCCCGCGAAAGTTACTAAGCAGAATTCTGTAGACGAATTATCAGGCGGATCTGGCACTAATCCTTTTGATTCAGATTCTGGGCCTGAAGCCAAACAAACTCTTAATGCTGCAAGAAGAACTTCTTCTGAGCCTGTGCTCGTTATACCTAACTCCATTTCCGCCAACGCTTTTGATGATGATGATGATGATGGATTTGTTGGAAAAAGAGGGACTGCAACTTCTGCAGCCTCTAAAGACAGGTACAAAAATGATTTTCGTGACTCAGGAGGACTCGAGAACCAAAGTGTGCAGGAATTGGAGAATTATGCTCTGTATAAAGCAGAGGAGACCACAAAATCTGTTAACAATTGCTTGAAGATTGCTGAGGACATAAGGGAAGATGCTACCAAGACCCTTGACATGTTGCATCAGCAGGGTGAGCAAATTGAGAGGACCCACAGGATGGCTGCTGATATGGATAAAGATTTAAGCAAGGGTGAGAAACTTCTGAATAATCTGGGAGGCATGTTCTCAAAGCCATGGAAGCCAAAGAAGACCAAAGAAATTACAGGCCCTCTTATAACAGCAGATCATTCCTCTGGGCGAACTGAAAACAACAAGGAGCAAAGGGAAAAACTCGGTGTATCTACGGGCAAAAAACAGTCGGCGACTAAAACACCACCCTCTGAACCAACAGGTGCAATACAAAAAGTTGAGGCTCAGAAGGAAATGCAAGATGATGCACTCTCAGATTTAAGTAATATCTTGGGTGATCTGAAGAGTATGGCTGTGGACATGGGAAGCGAGCTTGACAGGCAAAACAAAGCTCTTGATCATCTAAGCGACGATGTCGACGAGCTGAATTCTAGAGTGAAGGGTGCCAATCAGCGGGCTCGTCATTTGGTTGGGAAGTAA MFSFMKSPAKVTKQNSVDELSGGSGTNPFDSDSGPEAKQTLNAARRTSSEPVLVIPNSISANAFDDDDDDGFVGKRGTATSAASKDRYKNDFRDSGGLENQSVQELENYALYKAEETTKSVNNCLKIAEDIREDATKTLDMLHQQGEQIERTHRMAADMDKDLSKGEKLLNNLGGMFSKPWKPKKTKEITGPLITADHSSGRTENNKEQREKLGVSTGKKQSATKTPPSEPTGAIQKVEAQKEMQDDALSDLSNILGDLKSMAVDMGSELDRQNKALDHLSDDVDELNSRVKGANQRARHLVGK Homology
BLAST of CmaCh04G016930 vs. ExPASy Swiss-Prot
Match: Q9LMG8 (Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana OX=3702 GN=SNAP30 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 3.7e-91 Identity = 185/304 (60.86%), Postives = 218/304 (71.71%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy Swiss-Prot
Match: Q9S7P9 (SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana OX=3702 GN=SNAP33 PE=1 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 4.4e-84 Identity = 179/306 (58.50%), Postives = 219/306 (71.57%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy Swiss-Prot
Match: Q9SD96 (SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana OX=3702 GN=SNAP29 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 8.3e-59 Identity = 131/247 (53.04%), Postives = 172/247 (69.64%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy Swiss-Prot
Match: P36977 (Synaptosomal-associated protein 25-A OS=Carassius auratus OX=7957 GN=snap25a PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.6e-15 Identity = 59/208 (28.37%), Postives = 108/208 (51.92%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy Swiss-Prot
Match: Q17QQ3 (Synaptosomal-associated protein 25 OS=Bos taurus OX=9913 GN=SNAP25 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 57/207 (27.54%), Postives = 108/207 (52.17%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy TrEMBL
Match: A0A6J1J9F6 (putative SNAP25 homologous protein SNAP30 OS=Cucurbita maxima OX=3661 GN=LOC111482502 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy TrEMBL
Match: A0A6J1H000 (putative SNAP25 homologous protein SNAP30 OS=Cucurbita moschata OX=3662 GN=LOC111458786 PE=4 SV=1) HSP 1 Score: 570.1 bits (1468), Expect = 5.6e-159 Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy TrEMBL
Match: A0A0A0KQT5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606590 PE=4 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.5e-148 Identity = 280/305 (91.80%), Postives = 293/305 (96.07%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy TrEMBL
Match: A0A1S3BF13 (putative SNAP25 homologous protein SNAP30 OS=Cucumis melo OX=3656 GN=LOC103489173 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 8.4e-147 Identity = 279/305 (91.48%), Postives = 293/305 (96.07%), Query Frame = 0
BLAST of CmaCh04G016930 vs. ExPASy TrEMBL
Match: A0A5D3CF89 (Putative SNAP25-like proteinous protein SNAP30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00020 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.6e-140 Identity = 277/340 (81.47%), Postives = 292/340 (85.88%), Query Frame = 0
BLAST of CmaCh04G016930 vs. NCBI nr
Match: XP_022984084.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita maxima]) HSP 1 Score: 582.4 bits (1500), Expect = 2.3e-162 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CmaCh04G016930 vs. NCBI nr
Match: XP_023528612.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 572.0 bits (1473), Expect = 3.0e-159 Identity = 298/304 (98.03%), Postives = 300/304 (98.68%), Query Frame = 0
BLAST of CmaCh04G016930 vs. NCBI nr
Match: XP_022957363.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >KAG7032248.1 putative SNAP25-likeous protein SNAP30 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 570.1 bits (1468), Expect = 1.2e-158 Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of CmaCh04G016930 vs. NCBI nr
Match: KAG6601467.1 (putative SNAP25-likeous protein SNAP30, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 568.5 bits (1464), Expect = 3.4e-158 Identity = 297/304 (97.70%), Postives = 300/304 (98.68%), Query Frame = 0
BLAST of CmaCh04G016930 vs. NCBI nr
Match: XP_004135151.1 (putative SNAP25 homologous protein SNAP30 [Cucumis sativus] >XP_011655703.1 putative SNAP25 homologous protein SNAP30 [Cucumis sativus] >XP_031740914.1 putative SNAP25 homologous protein SNAP30 [Cucumis sativus] >KGN51968.1 hypothetical protein Csa_009347 [Cucumis sativus]) HSP 1 Score: 535.4 bits (1378), Expect = 3.2e-148 Identity = 280/305 (91.80%), Postives = 293/305 (96.07%), Query Frame = 0
BLAST of CmaCh04G016930 vs. TAIR 10
Match: AT1G13890.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 30 ) HSP 1 Score: 336.3 bits (861), Expect = 2.6e-92 Identity = 185/304 (60.86%), Postives = 218/304 (71.71%), Query Frame = 0
BLAST of CmaCh04G016930 vs. TAIR 10
Match: AT5G61210.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 33 ) HSP 1 Score: 312.8 bits (800), Expect = 3.1e-85 Identity = 179/306 (58.50%), Postives = 219/306 (71.57%), Query Frame = 0
BLAST of CmaCh04G016930 vs. TAIR 10
Match: AT5G07880.1 (synaptosomal-associated protein SNAP25-like 29 ) HSP 1 Score: 228.8 bits (582), Expect = 5.9e-60 Identity = 131/247 (53.04%), Postives = 172/247 (69.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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