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CmaCh04G013650 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGTGGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTGTATTCAATGGCGGTGGTGGAGGAGGAGGAGATGCATCTTGAGAGAGAGTAAAATTTGTGAATTGAAAGAACACAAAAATGAGAATAAAAACAGAAATTCCAATCCTTCTTGCCATGAGGCTACCTATGATAAAGATGCACATAAACACAAATATTTATACACTTTTAATATAAATACACATTCTTGAAAGCTTTAAGAGCTTTAATTTATGTTCTGTCTTGTTTTATTTGTCTGCAATTTTAAGATTATTGTGTGCATAAAATTTATGTAAATTTTATTTATGGGGTCTTTTAAATGTATAAATTAGCCTTCAAAACTTTACTTTTATCGATCAAAGATTATTTTAGCTATAGAATCAAATGGCAGGCGTAGCCGGCTGCCTACAAAACCAAACAATTAAATAGTATGCGTAGTTAACGTTACTTAATATTAACATTACTTTATAGAATATTAATACTTGATTCAAATTTACATCAAAATTAGGTTGTTTATTTAAAGTATATTTTGAATTTTGTAATTCAAAACAATAATTTTTTAAAGCTAAGATTTATATGTTTTTAGTGTATCTTGATATTCAAGTTGAAATACATAATTATATTTTAAATTATGTTAAATTTATGTTTTTAAAATTTTAATTTATAATTTCATTCGCTTTTTATTACTTATGAATGGGTGTGGATGGAACGTTAGGAAGAGCGTTTGGGCCGGGCCTTGATTATTATGGAATTTGAGCTGAGCTTTTGTATATAAAAGGGATGTAATTGGGCTTCTTTGATCTTTGAGCCCATTAATTTCTATCATTAACGGGTCTACTGAGCGTCAACTTAAAACGCCGACGTTTTATACTCCTCCGTAAATAAAAGCGCAAGAGCTCTCGTGGATTCTCTTTATAAAGGCCAATAGTGGTATCTGGAATACTGACGAGAGCCATTTTTTCGCGCGAAAGTTGAAATTGCTCTGTTGAGAAGTGCGATGATTTTTCGTTCGAAGTTTTTGGTTGCTCGAGATGCTGTAAGTAAACGCCGTTCCACTTCCAGTGATTTTCCTTTCACAAAACGATATTGTTTCTTGTTAGGTCTTGTAAATACGAAGTTCTTTACGATTTTGTTTAGTCGAAGAGGAATCCAAATCGTTTATTGAACTAATAACGGTGATTTCTCACTCTCGTAATCCTTGATATGAAAAGTTTTGTTCGTCGATCGGATTAGATTAGGTCTTTTAATTGATCGATTTATCTCTTAGGATGTGTACGGTCTGATGTCTCAATACTTAATATCTTGGATTTTGCCATTTCGAACTAGCTGCGGCAGTGCTGGTTATCGTGAGTTCAAATTAGACTCCCTCTGAACATATTGTTTCTACAATCAATAGTCGTGATTGTAGTCTTATGAATCTTAATTGCGTTACGATTTTGATTAGTCGGAGAGGAAACCGAACCGTTTATTTAACTAGCGATCGTTATTACTCAGTGTCGTAACTCTGATGATAAAAATTTTTGTTGTTCGTCGATCAAATTAACTTAGGTGAGTTAGTTGATTGATCTGAATCATATATCGATTTGTCTCTTGTGCACGATTCCGATGATTAATAGAATCTCTCTCGATATAATTTATCTTATGTTTTGCATAAATCGCTGATATTCCTTGTTCTTCTAACTTTAAATTAAAAATGATTCCTCGACGAGCGTTCAGATATTTATTTTTTATCTCAGAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGATGCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGTATTTTGATGATTTTACACCGTGATACTCTTATAGTCTTTTATAAAGTTCAAATCGTGAAGCAAGTACTTCGAAAATCTAGCAAACTTCTCTGAATTTTTTTCTTGCTAATTTATTTCATTTTTGTGCAATTAGAACTGTGATACTTTTCGATTTGTTGAATATTATGTCCGGTAGAAGCTTGCACTGATTCATTAGATTTCGTACATTCGAGGCTTGAGTTGTGTTTCTTTTTAGAAAAGGAAAAGATAAGAGTTACTGCTGCCTATCAACATTGTGATCTGAGTCTTGGTTTTATTCATTTAGGAACTCTCGGGTTGTAATATTATCTCAAATATTTTGTATAAAACAACTTTCCTAAAATAAGTTTTTTAAGCATGCTATTTCTCTTATTAACTTTTTAGTCATTATTTTTGAATAGTTCACGTCTAACCGTCTTCCAGTAGTCTTAATTTATTGTACATAATTATATTATCTGAAATATCTTATACAAAACAATTTTCCTGCTTCTCGTTACTCCTAATTGCTTCTAGGCTTGAACTCCCAAAAAAAATTATTGTTGGTTTAAGTATTCTCTTCCTTCGAAGTTCGACGTCTTATTGTTTCTTAATAGTCTTAGTTTCCTTTAGGTTTATGTTGTTCTTTGATGTTTTTCGTCATATATAGAATGACTTTTTTTCGTTATTTATTATTAATGTACTCTGTTCAGTCTATACACTATGATACTTATGGAATAATTTAAGTTGCTTAAAATACCATCCTGAGTAAATCATATGCCAGTTAAGGATACAAAATCAGAAAATTCCAGTTATCAATCAGCCTTCTTTTGATTATGACTTTATTGCTCCCCGTGCTTATCCTAAAGCTGAGAAAGAAAAATAAAAAATTCTAAGAGCTTTAGTGAAGGGAACAATGAAAGATCTTGGGAAGTCTCAAAACTGCGACATCCTAAAACTTCTCAATTTTCTGGATTTATCATTGAGTGTTCTTTGGTTTCTTTTCCATCAAAATTAGCACCTAACCGTACAAACTACAGTACCCTTATGCTTGAGAGGGTTGCCAACCAAAGGTAGCTCCAAACATTTTCGGATTAAGAGAGTGTTTCAATAGTTGACACCAAATGATTTTGGGTTGGAATATTTAACTTTTCTTGTTATTTTAATCTCTATTTACTCTTAATGGAGTTAGATTAGAGAGATTTGTACGGGCAGACATTTAGTTCACTTCCATCCAGTGTCCAAAATACTCGTTATCAACAGATGTATTGAAAATGAAAAATGTTGTGTAAATTTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTGCACAATTAGGTCGAGAGAAGAAAGTCCTCCAAGAATTAGTGTTGGAATCCCCACAATCTTTAATCAAAACAATTGAAGAGTTGAAAATTTTGATTGAACAAACTTTTAAGGGATTTGAACCAAAAACTCACTTTTTCCTTATCCTTAGTTCTAAAGAAGAGATCCTCGTTTATTTTCATACAGATGAGAGAACTTGTAGAATATCAAGTCTTGTGATCATTTTGATTGATATATATTTTTCTGAGGAAATTATGGTTGATATATTTTATTTATTGTCTAGAGGGGAAATATGTATCTCGGTATTGCGCTATATAATATTTTTTTTTTATTGAGAATATCCCACTCACATCTTCTCACATGTACAACACTAAAGAAATAGGTGGCATGTACAGTGTCATAGAAACCAAATAATATTCATATAACCCAAGACAATTTAGGTAATTCTCAACTTAAGTTTTGTGCATTCTCTAATAAACATTTTTGTCCATCGAAAATACCACCAAACTTATCCCATATATATTCTAAGTGATCCGAAGCACTTCCTAGTTCCTATTTCAGATGTTTGAGTTTGGTTACTATTTTAAAACACTTTTCAATAAAGTAAGAACACTATTTTCAAAAAAAGAAATTAGTTCATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAATTCTTCTCTTTCTAATATCTTTCTTGACAGTTTTTTCTCTCGTTAATTTCTCTTTTTGCACCATTTCTTTCTCCAGCTTCTCTCTCCCATTTTATCTCACTAATTTTCGTGACACTAACTTCCTTCTCTAATTTACTCTCTTCACACACACTTGTTTGTACTAGTCTCTCTACAGTAACGAGTCTCTTGTTAATATCTCTCTGCAAGTATTATCTCATTTGTTTCATTTTTGTGATTTAGTTTTAATAATTTTAACATATTTGATTGTGGTGATATGTGAATTCTAGAAACTAGAAGCATCTATAGTCTGTATTTTACCAAGTACTTGTAGATGACTAAAAGTATGTTGCGAAAACTTGGTTTGAGAATTTTAAAATAGATAGAAATCGCTTTAGATGGATCATTTAACTAATCTTTAAAACGTTAGTAGGATGAATACTTGTTTTATAACCTTCTATACTTATTTTACATGTTCGAAGTACTCCATCAACTTATGGTCATCAGGGGTGTAACTGATTTGATTCGATTTGGGTGTCTAATCTAAGCCATAAATGTTATGGTCAAGTATATATTTAGGAGGGATTTTGAAATTGCTAAACTGCTTTTGTGAGTTTAAAATTACTTAGAACATGCATCAAATGATTCAACCATTTTTAAATTTGCAGGATGAATTTGATAAAATTCCTAGTTACTTTGACCATGAAAGATTGATCAAAAGGGCTGTGTACACATTTCTTGTTCCTAGTAATATAGGTTTGAGAATCATGAGCGAAACTTCAAACGTTGTTAATAAAACATTGAGACTAAAAGCTTCTGCATGTTGCATTGTGTGCATACTTTTCGATAGTTTACATCTTGCACTATCTTTTAGGAATGAGTTCGAACCAATATGCATCTGGACTTCGCGTTGATGTTGAATTTGATGCATAAGCTTTGAAGCGAAGTAATTGCAACTGCAACATGTCGCAGAGGTTTGTTCCTCTACCAACGCTTTTCTTTCTTTTTCTCTTTCTTGCACATCTACAAAGTCAGAAAATTCTCAAAATTATTCATATTAATAGAACAAGAATTCTAACAAAAAGATCAATAATCTTAGCAATAAGTTAGTGCTAGCATTTCAGAAAGTTCGTAATGAGATAATTTCAAATTTCTTGCTGAAAACAATTAAGGTAAATATGATGTGTTCCCCTTATGTTTATACAACCATTTGGCAGAAAAGTTTTCTTAATAAAAGGGTTACACGGTTGTTTAACTTTCAAGTGGGAGGGTGCTATATAGAATTTCTATTCTTTTTTAAAAAGAAATTAAATAAAATAGAAAATTTTAATTTACAAATGTATTTCTTTCATAACGAAGCACTTGAAGTTTAGATAATATTTTTAGAATTGGAGATAAACTTAAAAGAGAATGATGCAACAAAAAAGAAAGATGAGTTAAGAAGATTTCCTAGGCTTAGAAAAGAAAAGTCTAATATGAGAAAGAAAGCAATTGAAGGAAAACTAGATTTTCCAAGATGGAAAAGAATGAAAATGAATGAGAGAAAGAGTTTTAGTTTTAAAATTTACTTACATTTCCAAAATTTAAATTTAGAAGTTTAATAGATTGTTGAGGCTTTGTATGATAACCGAAATTTTTTGGTTATTGGTTTTTCTACCCTCTATTCTTCTCTCCCTGCTTTTTAATCGATAAAAAACAGAAAATGCCACTGAACATTCTTTTTTCATTATCTATAAGAAGACTTCTTATTGCGTTTTTTATCTTAAATAAAAATGTTAGGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGTGGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGATGCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGTGGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGATGCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSVNFEDDLASGVIYVDACFELLPEGPEHIYWYGKEQVKRLGEKS Homology
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A0A6J1JS83 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111487352 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 5.8e-57 Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A0A6J1GYP3 (loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 3.5e-46 Identity = 117/137 (85.40%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A0A1S4DW63 (loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.9e-13 Identity = 60/92 (65.22%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A8E425 (Pectate lyase OS=Pseudomonas viridiflava OX=33069 GN=hrpW PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.0e-08 Identity = 56/105 (53.33%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: Q8WSL3 (Circumsporozoite protein OS=Plasmodium vinckei petteri OX=138298 GN=CS PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05 Identity = 54/88 (61.36%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_022990509.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]) HSP 1 Score: 230.3 bits (586), Expect = 1.2e-56 Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_022957272.1 (loricrin-like [Cucurbita moschata]) HSP 1 Score: 194.5 bits (493), Expect = 7.3e-46 Identity = 117/137 (85.40%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_023549817.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42 Identity = 110/135 (81.48%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of CmaCh04G013650 vs. NCBI nr
Match: KAG6601160.1 (hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.9 bits (411), Expect = 2.4e-36 Identity = 98/116 (84.48%), Postives = 99/116 (85.34%), Query Frame = 0
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_031741791.1 (glycine-rich protein 23-like [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 5.8e-27 Identity = 88/140 (62.86%), Postives = 92/140 (65.71%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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