CmaCh04G013650 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G013650
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionglycine-rich cell wall structural protein 1.0-like
LocationCma_Chr04: 6999769 .. 7005821 (+)
RNA-Seq ExpressionCmaCh04G013650
SyntenyCmaCh04G013650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGTGGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTGTATTCAATGGCGGTGGTGGAGGAGGAGGAGATGCATCTTGAGAGAGAGTAAAATTTGTGAATTGAAAGAACACAAAAATGAGAATAAAAACAGAAATTCCAATCCTTCTTGCCATGAGGCTACCTATGATAAAGATGCACATAAACACAAATATTTATACACTTTTAATATAAATACACATTCTTGAAAGCTTTAAGAGCTTTAATTTATGTTCTGTCTTGTTTTATTTGTCTGCAATTTTAAGATTATTGTGTGCATAAAATTTATGTAAATTTTATTTATGGGGTCTTTTAAATGTATAAATTAGCCTTCAAAACTTTACTTTTATCGATCAAAGATTATTTTAGCTATAGAATCAAATGGCAGGCGTAGCCGGCTGCCTACAAAACCAAACAATTAAATAGTATGCGTAGTTAACGTTACTTAATATTAACATTACTTTATAGAATATTAATACTTGATTCAAATTTACATCAAAATTAGGTTGTTTATTTAAAGTATATTTTGAATTTTGTAATTCAAAACAATAATTTTTTAAAGCTAAGATTTATATGTTTTTAGTGTATCTTGATATTCAAGTTGAAATACATAATTATATTTTAAATTATGTTAAATTTATGTTTTTAAAATTTTAATTTATAATTTCATTCGCTTTTTATTACTTATGAATGGGTGTGGATGGAACGTTAGGAAGAGCGTTTGGGCCGGGCCTTGATTATTATGGAATTTGAGCTGAGCTTTTGTATATAAAAGGGATGTAATTGGGCTTCTTTGATCTTTGAGCCCATTAATTTCTATCATTAACGGGTCTACTGAGCGTCAACTTAAAACGCCGACGTTTTATACTCCTCCGTAAATAAAAGCGCAAGAGCTCTCGTGGATTCTCTTTATAAAGGCCAATAGTGGTATCTGGAATACTGACGAGAGCCATTTTTTCGCGCGAAAGTTGAAATTGCTCTGTTGAGAAGTGCGATGATTTTTCGTTCGAAGTTTTTGGTTGCTCGAGATGCTGTAAGTAAACGCCGTTCCACTTCCAGTGATTTTCCTTTCACAAAACGATATTGTTTCTTGTTAGGTCTTGTAAATACGAAGTTCTTTACGATTTTGTTTAGTCGAAGAGGAATCCAAATCGTTTATTGAACTAATAACGGTGATTTCTCACTCTCGTAATCCTTGATATGAAAAGTTTTGTTCGTCGATCGGATTAGATTAGGTCTTTTAATTGATCGATTTATCTCTTAGGATGTGTACGGTCTGATGTCTCAATACTTAATATCTTGGATTTTGCCATTTCGAACTAGCTGCGGCAGTGCTGGTTATCGTGAGTTCAAATTAGACTCCCTCTGAACATATTGTTTCTACAATCAATAGTCGTGATTGTAGTCTTATGAATCTTAATTGCGTTACGATTTTGATTAGTCGGAGAGGAAACCGAACCGTTTATTTAACTAGCGATCGTTATTACTCAGTGTCGTAACTCTGATGATAAAAATTTTTGTTGTTCGTCGATCAAATTAACTTAGGTGAGTTAGTTGATTGATCTGAATCATATATCGATTTGTCTCTTGTGCACGATTCCGATGATTAATAGAATCTCTCTCGATATAATTTATCTTATGTTTTGCATAAATCGCTGATATTCCTTGTTCTTCTAACTTTAAATTAAAAATGATTCCTCGACGAGCGTTCAGATATTTATTTTTTATCTCAGAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGATGCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGTATTTTGATGATTTTACACCGTGATACTCTTATAGTCTTTTATAAAGTTCAAATCGTGAAGCAAGTACTTCGAAAATCTAGCAAACTTCTCTGAATTTTTTTCTTGCTAATTTATTTCATTTTTGTGCAATTAGAACTGTGATACTTTTCGATTTGTTGAATATTATGTCCGGTAGAAGCTTGCACTGATTCATTAGATTTCGTACATTCGAGGCTTGAGTTGTGTTTCTTTTTAGAAAAGGAAAAGATAAGAGTTACTGCTGCCTATCAACATTGTGATCTGAGTCTTGGTTTTATTCATTTAGGAACTCTCGGGTTGTAATATTATCTCAAATATTTTGTATAAAACAACTTTCCTAAAATAAGTTTTTTAAGCATGCTATTTCTCTTATTAACTTTTTAGTCATTATTTTTGAATAGTTCACGTCTAACCGTCTTCCAGTAGTCTTAATTTATTGTACATAATTATATTATCTGAAATATCTTATACAAAACAATTTTCCTGCTTCTCGTTACTCCTAATTGCTTCTAGGCTTGAACTCCCAAAAAAAATTATTGTTGGTTTAAGTATTCTCTTCCTTCGAAGTTCGACGTCTTATTGTTTCTTAATAGTCTTAGTTTCCTTTAGGTTTATGTTGTTCTTTGATGTTTTTCGTCATATATAGAATGACTTTTTTTCGTTATTTATTATTAATGTACTCTGTTCAGTCTATACACTATGATACTTATGGAATAATTTAAGTTGCTTAAAATACCATCCTGAGTAAATCATATGCCAGTTAAGGATACAAAATCAGAAAATTCCAGTTATCAATCAGCCTTCTTTTGATTATGACTTTATTGCTCCCCGTGCTTATCCTAAAGCTGAGAAAGAAAAATAAAAAATTCTAAGAGCTTTAGTGAAGGGAACAATGAAAGATCTTGGGAAGTCTCAAAACTGCGACATCCTAAAACTTCTCAATTTTCTGGATTTATCATTGAGTGTTCTTTGGTTTCTTTTCCATCAAAATTAGCACCTAACCGTACAAACTACAGTACCCTTATGCTTGAGAGGGTTGCCAACCAAAGGTAGCTCCAAACATTTTCGGATTAAGAGAGTGTTTCAATAGTTGACACCAAATGATTTTGGGTTGGAATATTTAACTTTTCTTGTTATTTTAATCTCTATTTACTCTTAATGGAGTTAGATTAGAGAGATTTGTACGGGCAGACATTTAGTTCACTTCCATCCAGTGTCCAAAATACTCGTTATCAACAGATGTATTGAAAATGAAAAATGTTGTGTAAATTTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTGCACAATTAGGTCGAGAGAAGAAAGTCCTCCAAGAATTAGTGTTGGAATCCCCACAATCTTTAATCAAAACAATTGAAGAGTTGAAAATTTTGATTGAACAAACTTTTAAGGGATTTGAACCAAAAACTCACTTTTTCCTTATCCTTAGTTCTAAAGAAGAGATCCTCGTTTATTTTCATACAGATGAGAGAACTTGTAGAATATCAAGTCTTGTGATCATTTTGATTGATATATATTTTTCTGAGGAAATTATGGTTGATATATTTTATTTATTGTCTAGAGGGGAAATATGTATCTCGGTATTGCGCTATATAATATTTTTTTTTTATTGAGAATATCCCACTCACATCTTCTCACATGTACAACACTAAAGAAATAGGTGGCATGTACAGTGTCATAGAAACCAAATAATATTCATATAACCCAAGACAATTTAGGTAATTCTCAACTTAAGTTTTGTGCATTCTCTAATAAACATTTTTGTCCATCGAAAATACCACCAAACTTATCCCATATATATTCTAAGTGATCCGAAGCACTTCCTAGTTCCTATTTCAGATGTTTGAGTTTGGTTACTATTTTAAAACACTTTTCAATAAAGTAAGAACACTATTTTCAAAAAAAGAAATTAGTTCATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAATTCTTCTCTTTCTAATATCTTTCTTGACAGTTTTTTCTCTCGTTAATTTCTCTTTTTGCACCATTTCTTTCTCCAGCTTCTCTCTCCCATTTTATCTCACTAATTTTCGTGACACTAACTTCCTTCTCTAATTTACTCTCTTCACACACACTTGTTTGTACTAGTCTCTCTACAGTAACGAGTCTCTTGTTAATATCTCTCTGCAAGTATTATCTCATTTGTTTCATTTTTGTGATTTAGTTTTAATAATTTTAACATATTTGATTGTGGTGATATGTGAATTCTAGAAACTAGAAGCATCTATAGTCTGTATTTTACCAAGTACTTGTAGATGACTAAAAGTATGTTGCGAAAACTTGGTTTGAGAATTTTAAAATAGATAGAAATCGCTTTAGATGGATCATTTAACTAATCTTTAAAACGTTAGTAGGATGAATACTTGTTTTATAACCTTCTATACTTATTTTACATGTTCGAAGTACTCCATCAACTTATGGTCATCAGGGGTGTAACTGATTTGATTCGATTTGGGTGTCTAATCTAAGCCATAAATGTTATGGTCAAGTATATATTTAGGAGGGATTTTGAAATTGCTAAACTGCTTTTGTGAGTTTAAAATTACTTAGAACATGCATCAAATGATTCAACCATTTTTAAATTTGCAGGATGAATTTGATAAAATTCCTAGTTACTTTGACCATGAAAGATTGATCAAAAGGGCTGTGTACACATTTCTTGTTCCTAGTAATATAGGTTTGAGAATCATGAGCGAAACTTCAAACGTTGTTAATAAAACATTGAGACTAAAAGCTTCTGCATGTTGCATTGTGTGCATACTTTTCGATAGTTTACATCTTGCACTATCTTTTAGGAATGAGTTCGAACCAATATGCATCTGGACTTCGCGTTGATGTTGAATTTGATGCATAAGCTTTGAAGCGAAGTAATTGCAACTGCAACATGTCGCAGAGGTTTGTTCCTCTACCAACGCTTTTCTTTCTTTTTCTCTTTCTTGCACATCTACAAAGTCAGAAAATTCTCAAAATTATTCATATTAATAGAACAAGAATTCTAACAAAAAGATCAATAATCTTAGCAATAAGTTAGTGCTAGCATTTCAGAAAGTTCGTAATGAGATAATTTCAAATTTCTTGCTGAAAACAATTAAGGTAAATATGATGTGTTCCCCTTATGTTTATACAACCATTTGGCAGAAAAGTTTTCTTAATAAAAGGGTTACACGGTTGTTTAACTTTCAAGTGGGAGGGTGCTATATAGAATTTCTATTCTTTTTTAAAAAGAAATTAAATAAAATAGAAAATTTTAATTTACAAATGTATTTCTTTCATAACGAAGCACTTGAAGTTTAGATAATATTTTTAGAATTGGAGATAAACTTAAAAGAGAATGATGCAACAAAAAAGAAAGATGAGTTAAGAAGATTTCCTAGGCTTAGAAAAGAAAAGTCTAATATGAGAAAGAAAGCAATTGAAGGAAAACTAGATTTTCCAAGATGGAAAAGAATGAAAATGAATGAGAGAAAGAGTTTTAGTTTTAAAATTTACTTACATTTCCAAAATTTAAATTTAGAAGTTTAATAGATTGTTGAGGCTTTGTATGATAACCGAAATTTTTTGGTTATTGGTTTTTCTACCCTCTATTCTTCTCTCCCTGCTTTTTAATCGATAAAAAACAGAAAATGCCACTGAACATTCTTTTTTCATTATCTATAAGAAGACTTCTTATTGCGTTTTTTATCTTAAATAAAAATGTTAGGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG

mRNA sequence

ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGTGGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGATGCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG

Coding sequence (CDS)

ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGTGGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGATGCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG

Protein sequence

MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSVNFEDDLASGVIYVDACFELLPEGPEHIYWYGKEQVKRLGEKS
Homology
[Close]
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A0A6J1JS83 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111487352 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.8e-57
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGG 60
           MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGG
Sbjct: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGG 60

Query: 61  GVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGG 120
           GVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGG
Sbjct: 61  GVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGG 120

Query: 121 GGAPSVNF 129
           GGAPSV F
Sbjct: 121 GGAPSVVF 128

[Close]
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A0A6J1GYP3 (loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.5e-46
Identity = 117/137 (85.40%), Postives = 118/137 (86.13%), Query Frame = 0 

Query: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA---- 60
           MNPKNPNKPAPIITP  MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA    
Sbjct: 3   MNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEM 62

Query: 61  ---GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPV 120
              GGGGG+SVVFD  GGGGGLP VLDGGGGGGLPVVLDG GGGGLPVVLDGAGGGGLPV
Sbjct: 63  LVSGGGGGLSVVFD--GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPV 122

Query: 121 VLD--GGGGGGAPSVNF 129
           VLD  GGGGGGAPSV F
Sbjct: 123 VLDGGGGGGGGAPSVVF 137

[Close]
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A0A1S4DW63 (loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.9e-13
Identity = 60/92 (65.22%), Postives = 65/92 (70.65%), Query Frame = 0 

Query: 43  GAGGGDEFTSGEGA--------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGG 102
           G GGGDE    +G         GGGGGVSVVFD GGGGGG+  V DGGGGGG+ VV DGG
Sbjct: 7   GGGGGDELVVLDGGGGVSVVLDGGGGGVSVVFD-GGGGGGVSVVFDGGGGGGVSVVFDGG 66

Query: 103 GGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV 127
           GGGG+ VV DG GGGG+ VVLDGGGGGG   V
Sbjct: 67  GGGGVSVVFDGGGGGGVLVVLDGGGGGGVSVV 97

[Close]
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: A8E425 (Pectate lyase OS=Pseudomonas viridiflava OX=33069 GN=hrpW PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.0e-08
Identity = 56/105 (53.33%), Postives = 63/105 (60.00%), Query Frame = 0 

Query: 25  LSPFESAPPFSFNA---SFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDG 84
           ++ F  + P +FN    +   G GGG   T   G GGGGG +    GGGGGGG P+V  G
Sbjct: 226 IAQFMDSHPETFNQPSDAAGKGGGGGGGGTPSVGGGGGGGGTPSVGGGGGGGGTPSVGGG 285

Query: 85  GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV 127
           GGGGG P V  GGGGGG P V  G GGGG P V  GGGGGG PSV
Sbjct: 286 GGGGGTPSVGGGGGGGGTPSVGGGGGGGGTPSVGGGGGGGGTPSV 330

[Close]
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match: Q8WSL3 (Circumsporozoite protein OS=Plasmodium vinckei petteri OX=138298 GN=CS PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 54/88 (61.36%), Postives = 60/88 (68.18%), Query Frame = 0 

Query: 43  GAGGGDEFTSGEGAGGGGGVS-VVFDGGGGGGGL-PAVLDGGGGGG--LPVVLDGGGGGG 102
           G GGG +    +G GGGGG    V DGGGGGGG  P V+DGGGGGG   P V+DGGGGGG
Sbjct: 162 GGGGGQDPPVVDGGGGGGGQDPPVVDGGGGGGGQDPPVVDGGGGGGGQDPPVVDGGGGGG 221

Query: 103 --LPVVLDGAGGGG--LPVVLDGGGGGG 123
              P V+DG GGGG   P V+DGGGGGG
Sbjct: 222 GQDPPVVDGGGGGGGQDPPVVDGGGGGG 249

[Close]
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_022990509.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima])

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-56
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGG 60
           MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGG
Sbjct: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGG 60

Query: 61  GVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGG 120
           GVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGG
Sbjct: 61  GVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGG 120

Query: 121 GGAPSVNF 129
           GGAPSV F
Sbjct: 121 GGAPSVVF 128

[Close]
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_022957272.1 (loricrin-like [Cucurbita moschata])

HSP 1 Score: 194.5 bits (493), Expect = 7.3e-46
Identity = 117/137 (85.40%), Postives = 118/137 (86.13%), Query Frame = 0 

Query: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA---- 60
           MNPKNPNKPAPIITP  MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA    
Sbjct: 3   MNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEM 62

Query: 61  ---GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPV 120
              GGGGG+SVVFD  GGGGGLP VLDGGGGGGLPVVLDG GGGGLPVVLDGAGGGGLPV
Sbjct: 63  LVSGGGGGLSVVFD--GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPV 122

Query: 121 VLD--GGGGGGAPSVNF 129
           VLD  GGGGGGAPSV F
Sbjct: 123 VLDGGGGGGGGAPSVVF 137

[Close]
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_023549817.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42
Identity = 110/135 (81.48%), Postives = 114/135 (84.44%), Query Frame = 0 

Query: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA---- 60
           MNPKNPNKPAP+ITP  MPAFCPPLSPFESAPPFSFNA FV GAG GDE TSGEGA    
Sbjct: 19  MNPKNPNKPAPMITPNAMPAFCPPLSPFESAPPFSFNALFVAGAGAGDELTSGEGAGGEM 78

Query: 61  ---GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPV 120
              GGGGG+SVVFDGGGGG  +  V +GGGGGGLPVVLD  GGGGLPVVLDGAGGGGLPV
Sbjct: 79  LVSGGGGGLSVVFDGGGGGPSV--VFNGGGGGGLPVVLDAAGGGGLPVVLDGAGGGGLPV 138

Query: 121 VLDGGGGGGAPSVNF 129
           VLDGGGGGGAPSV F
Sbjct: 139 VLDGGGGGGAPSVVF 151

[Close]
BLAST of CmaCh04G013650 vs. NCBI nr
Match: KAG6601160.1 (hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-36
Identity = 98/116 (84.48%), Postives = 99/116 (85.34%), Query Frame = 0 

Query: 18  MPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGG 77
           MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA       GGGGG+SVVFD  G
Sbjct: 1   MPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFD--G 60

Query: 78  GGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV 127
           GGGGLP VLDGGGGGGLPVVLDG GGGGLPVVLDGAGGGGLPVVLDG GGGG P V
Sbjct: 61  GGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVV 114

[Close]
BLAST of CmaCh04G013650 vs. NCBI nr
Match: XP_031741791.1 (glycine-rich protein 23-like [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-27
Identity = 88/140 (62.86%), Postives = 92/140 (65.71%), Query Frame = 0 

Query: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA---- 60
           +NP NPNKP P+ITP  +PAFCPPL+PFE  PPFSFNA   VG GGGDE   G GA    
Sbjct: 3   INPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKL 62

Query: 61  ----GGGGGVSVVFDGGG---------GGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVL 120
               GGGGG  VV DGGG         GGGG   VL GGGGGG  V LDGGGGGG  V L
Sbjct: 63  TVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGASVAL 122

Query: 121 DGAGGGGLPVVLDGGGGGGA 124
           DG GGGG  V LDGGGGGGA
Sbjct: 123 DGGGGGGASVALDGGGGGGA 142

The following BLAST results are available for this feature:
BLAST of CmaCh04G013650 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G013650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JS835.8e-5799.22glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1GYP33.5e-4685.40loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1[more]
A0A1S4DW633.9e-1365.22loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1[more]
A8E4251.0e-0853.33Pectate lyase OS=Pseudomonas viridiflava OX=33069 GN=hrpW PE=3 SV=1[more]
Q8WSL34.0e-0561.36Circumsporozoite protein OS=Plasmodium vinckei petteri OX=138298 GN=CS PE=3 SV=1[more]
BLAST of CmaCh04G013650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022990509.11.2e-5699.22glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima][more]
XP_022957272.17.3e-4685.40loricrin-like [Cucurbita moschata][more]
XP_023549817.11.3e-4281.48glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo][more]
KAG6601160.12.4e-3684.48hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_031741791.15.8e-2762.86glycine-rich protein 23-like [Cucumis sativus][more]
BLAST of CmaCh04G013650 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G013650.1CmaCh04G013650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity