CmaCh04G013510 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G013510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Yae1_N domain-containing protein
Location	Cma_Chr04: 6889462 .. 6892422 (-)
RNA-Seq Expression	CmaCh04G013510
Synteny	CmaCh04G013510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACGGCGCGGCCTTGTTTTCGCCCAACACTCTTTTTCTCGCGGTAATCAGTTTATTGCTTTCTCTAATTCTCTCCCTGTGTACATTGAATTCAATCTACACAATGGAACCTGTTTAAAAAGATTGATAATGCATGCCCGTTTGATACTAAGATACTCGGTGGACATGAATTGTTGATGTTTAGACGTTAATAGAAATGCTATCCTACGGTTGGTTATTTTGATTTAATAGCTGATAGTATCTTTAGTATTTATGACGTGGTTGGAGAACCCATTTTGATTTATTTCCCTTAGAAGTTAGTAGATGCGAATTAAATTGGAATTTTGCATGTTGAGTACCGACCTTAGGCTGGAAACTGAATAATAGGAATGATGCCCAATGTTCTAGGTGTTCTTGCTTGGTTGTAATTCATCAATTTCACAGCTGGTGATCCGTTCTGACACAGAATCTGAGTCTGGGTCTTAGAAATTGATTGAGAAGAAGTTTTGTTTGTGATGGATTGATGATATAAATGGTTTATGATTAGCTCGGGTTTTGGAATGCAGATTTAGTGAGATAAGTGAATCTGGCGATGTTCATAATTTTGATTTGGGTATCCCACCTCTCTTCCTCTCCTTCTCTTCGTACAATTGATCTTTCCACATTTCGGTTATTGGGGTGTTTAAGCTTTTCTTTGAGCGAAATTGGGGCTTTAATTTGTTGTTCTAGTTCTAGTTTTATGAAAAGATAAGGGCATGGGAAATTGTTGATGGGCGAAGATGTTCTGCTGTATGAAATGCTCATCTGTTTTTGTGGAATTGAGTGTATAGGCCCAATGCTTCTACTAATTGGTTTTGTCAAGAACCCTTCGTTTATTTTCTTTTTCCGCTATGTTGCGATAATTTAAGCAAGTCATTGTGCTTTGAAATCAAGTTCACTATAAGGTTTTCTTTTATTCGTTGCTGAAGATTGCAATCGCAATCGGCCTAATTCTGTTAGATGGAGGGTACCATTGCTGAAGAACTTTATTCCGAGAGTTTACAGTCAACAAAATCAAAATTGGCTGACATGTCATTATCTGATTACAGACAAAATCGGCCATCAGGTATTCCTATGTTTTCAATACTGCCTTGGTACATATAAAAGGGAACCTCACTAGAGGGAGGTGCTCCAGTTATGTAAAACAATACTCAAAGAATAGTTACCGAAGATTCTTGTCACCAATGCCCACAGAAACATGGAATCTAGCAAGGGACCATACATCACAAATTATGCCTAAAAAACGCTGTCATAACTTGACCTACGATTGTAGGATTATATGAATTAGGGTGTGGTTGCAGGTTCTGCTGTGAATGACTCGTGTGAAGATGATGGATCTTTATGGGGTGGTTCGGATGAAGGCTTGGAGGAAACATCTGATCTGGATAGGGAGTGGCATAGAAGACACGACCAATTTCATACGGTAACAGATTAACTATTCTATTTTATCTTTTTCTTTAATAAATGGTTTCACAAGAGAGGATTTAAATGGATTTCTTCACTCTTGCATATCGTTTAGATTGGATACCGTGATGGTTTAATTGCTGGGAAAGAAGCTGCATCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTCTATCGGATATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGGTTAGGAGAGAATAAATTTCCTACCATTTTACACATGCATGAATTCATACGTATCTCTTGAAGTTTGTGTCAGCAAGATTTTTTTTCATTTTCTTTTTATTTTAACGTGAAAGGACACTGGGTTCTTGTAATTGAACAGTTATATTATATTGCTCCTATGTTCTAAAATATGTGTTAAGTACAGCTGACATTTCAAATAGTCTGTCAAATTTTAGTCCTTCGGGCTTGTTTGGAATGATTTTTTTTTGCAATTAGAAAGTCATTTCAAGTCGGCCCTACGTGATGTTGCATTCTGTATTGTTAAGAGAGCCCGTCAAGTATGACATGCAAAGAGGTCCAGGGTTGTATTTATGAAACCACATCTGTCTCCCAGTCTCTGTGCAGCACGCATAGGCTTTCTCCAGGACCCGATTTAAATCAGTCTCATGTGTCGTGCAACAGTGTGAAGTTGGTAACCTGCATTGCCTTTTTTGCCCTCTTTCTTATTTATTTCCTTTGAATTTTAGTCTAAGTCCATGTCGTTCCTTTGGTGAGGATTTATCTATTGCTGCACCTAGCAAAATTATGCGATATAATTAGACGTTGAATCATAATTTAGGTGGCTATTTAAAATGCGAATTCTTAGTCGAATAGTTAGTTTGACAGGCTGTTTTCCTTTGCTGACTTTATGGAAAATTGTGGCTGAAAAGAAATTGGAGTCTTTAGTGAAAAGGGAAAGTTATTGGAGGAGTTGGGACTTGACCAAGTTTATTACCTCTTTCGATCTTTTGTGTCATTAAGGACTTCAGCAATTAGTCTCTCGTTCTTTTGAATTGGAGCATCTTTTTGTAATTCTTTCTTTAATGTTTCTTTTTTTATTTTGCTTTTTTGTATTGCCTTTGTGCTGTTCTCAATGAAATTTGTTCTGTTCATGGAAAAAAGTCCATTGGTCCATTGGTTTTGGTAATACTGCCTTCTACTGAATGTTTTCGTTTTCATCTTCTGAAGTGTGCTTGCTTCCCTTCCTGATGACTTGAAAGAAAAGCTAGTAGGGATTGAAGAAAACAGAAGTAAATTCCAAAGCTTGTATGAATCTGTGAACTCTCTTTCGACAGCAGATGCACTTAGGCTATTCCATGACGATATTATGGCACAACACACGAAAGAAGAAGGCGTCGATGCAAATACGAGTTCGCAAACAATAGATTTGTTGAAGCAAAATTCAGATTACAGTCGTCTAGGACAGTTCTATGGAGAGCTTCAAGCACTGTTACCCACATCACCTGCTCTGAATCTTCATTTACATGAAGAACAGTAG

mRNA sequence

ATGGCTGACGGCGCGGCCTTGTTTTCGCCCAACACTCTTTTTCTCGCGATGGAGGGTACCATTGCTGAAGAACTTTATTCCGAGAGTTTACAGTCAACAAAATCAAAATTGGCTGACATGTCATTATCTGATTACAGACAAAATCGGCCATCAGGTTCTGCTGTGAATGACTCGTGTGAAGATGATGGATCTTTATGGGGTGGTTCGGATGAAGGCTTGGAGGAAACATCTGATCTGGATAGGGAGTGGCATAGAAGACACGACCAATTTCATACGATTGGATACCGTGATGGTTTAATTGCTGGGAAAGAAGCTGCATCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTCTATCGGATATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTTCCCTTCCTGATGACTTGAAAGAAAAGCTAGTAGGGATTGAAGAAAACAGAAGTAAATTCCAAAGCTTGTATGAATCTGTGAACTCTCTTTCGACAGCAGATGCACTTAGGCTATTCCATGACGATATTATGGCACAACACACGAAAGAAGAAGGCGTCGATGCAAATACGAGTTCGCAAACAATAGATTTGTTGAAGCAAAATTCAGATTACAGTCGTCTAGGACAGTTCTATGGAGAGCTTCAAGCACTGTTACCCACATCACCTGCTCTGAATCTTCATTTACATGAAGAACAGTAG

Coding sequence (CDS)

ATGGCTGACGGCGCGGCCTTGTTTTCGCCCAACACTCTTTTTCTCGCGATGGAGGGTACCATTGCTGAAGAACTTTATTCCGAGAGTTTACAGTCAACAAAATCAAAATTGGCTGACATGTCATTATCTGATTACAGACAAAATCGGCCATCAGGTTCTGCTGTGAATGACTCGTGTGAAGATGATGGATCTTTATGGGGTGGTTCGGATGAAGGCTTGGAGGAAACATCTGATCTGGATAGGGAGTGGCATAGAAGACACGACCAATTTCATACGATTGGATACCGTGATGGTTTAATTGCTGGGAAAGAAGCTGCATCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTCTATCGGATATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTTCCCTTCCTGATGACTTGAAAGAAAAGCTAGTAGGGATTGAAGAAAACAGAAGTAAATTCCAAAGCTTGTATGAATCTGTGAACTCTCTTTCGACAGCAGATGCACTTAGGCTATTCCATGACGATATTATGGCACAACACACGAAAGAAGAAGGCGTCGATGCAAATACGAGTTCGCAAACAATAGATTTGTTGAAGCAAAATTCAGATTACAGTCGTCTAGGACAGTTCTATGGAGAGCTTCAAGCACTGTTACCCACATCACCTGCTCTGAATCTTCATTTACATGAAGAACAGTAG

Protein sequence

MADGAALFSPNTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ

Homology

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BLAST of CmaCh04G013510 vs. ExPASy Swiss-Prot
Match: Q9NRH1 (Protein YAE1 homolog OS=Homo sapiens OX=9606 GN=YAE1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.1e-05
Identity = 26/68 (38.24%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 70  DEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVR 129
           DE  +E+    REW     +    GYRDG+ AGK    Q+GFN G+K+   +    G +R
Sbjct: 21  DEEADESLLAQREWQSNMQRRVKEGYRDGIDAGKAVTLQQGFNQGYKKGAEVILNYGRLR 80

Query: 130 GVSSVLAS 138
           G  S L S
Sbjct: 81  GTLSALLS 88

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BLAST of CmaCh04G013510 vs. ExPASy TrEMBL
Match: A0A6J1JSZ3 (uncharacterized protein LOC111487537 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MADGAALFSPNTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCE 60
           MADGAALFSPNTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCE
Sbjct: 1   MADGAALFSPNTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCE 60

Query: 61  DDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVS 120
           DDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVS
Sbjct: 61  DDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVS 120

Query: 121 IGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIM 180
           IGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIM
Sbjct: 121 IGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIM 180

Query: 181 AQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           AQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ
Sbjct: 181 AQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 235

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BLAST of CmaCh04G013510 vs. ExPASy TrEMBL
Match: A0A6J1JRH1 (uncharacterized protein LOC111487537 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 17  MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 76
           MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 60

Query: 77  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 136
           SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 137 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 196
           SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ
Sbjct: 121 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 180

Query: 197 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ
Sbjct: 181 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 219

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BLAST of CmaCh04G013510 vs. ExPASy TrEMBL
Match: A0A6J1JR95 (uncharacterized protein LOC111487537 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 13  LFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEG 72
           + + MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEG
Sbjct: 4   ILIWMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEG 63

Query: 73  LEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVS 132
           LEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVS
Sbjct: 64  LEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVS 123

Query: 133 SVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDAN 192
           SVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDAN
Sbjct: 124 SVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDAN 183

Query: 193 TSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           TSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ
Sbjct: 184 TSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 226

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BLAST of CmaCh04G013510 vs. ExPASy TrEMBL
Match: A0A6J1H273 (uncharacterized protein LOC111458903 OS=Cucurbita moschata OX=3662 GN=LOC111458903 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.2e-112
Identity = 213/219 (97.26%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 17  MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 76
           MEGTIAEELYSESLQSTKSKLAD+SLSDYRQNRPSGSAVNDSCEDDGSLWGGSDE LEET
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADISLSDYRQNRPSGSAVNDSCEDDGSLWGGSDECLEET 60

Query: 77  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 136
           SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 137 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 196
           SLPDDLKEKLVGIEE RSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEE VDANTSSQ
Sbjct: 121 SLPDDLKEKLVGIEEYRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEECVDANTSSQ 180

Query: 197 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           TIDLLKQNSDY RLGQFYGELQALLP SPALNLHLHEEQ
Sbjct: 181 TIDLLKQNSDYGRLGQFYGELQALLPKSPALNLHLHEEQ 219

[Close]

BLAST of CmaCh04G013510 vs. ExPASy TrEMBL
Match: A0A1S4DX60 (uncharacterized protein LOC103489487 OS=Cucumis melo OX=3656 GN=LOC103489487 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.6e-97
Identity = 183/219 (83.56%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 17  MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 76
           MEGTIAEELYSESLQSTKSKL D+SLSDY+++RPSGS V+DSC+DDGSLWGGSDEGLEET
Sbjct: 1   MEGTIAEELYSESLQSTKSKLGDISLSDYKKDRPSGSGVDDSCKDDGSLWGGSDEGLEET 60

Query: 77  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 136
           +DLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFN+GFKQSVS+GYKLGLVRGVSSVLA
Sbjct: 61  ADLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNIGFKQSVSVGYKLGLVRGVSSVLA 120

Query: 137 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 196
           SLPDDLKEKL G  EN+SKFQSLYESVNSLST DALRLF+ DI  QHTKEE V ANT+SQ
Sbjct: 121 SLPDDLKEKLAGTPENQSKFQSLYESVNSLSTVDALRLFNGDITTQHTKEEFVSANTNSQ 180

Query: 197 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           T+DLLK+N DY RLG+FY EL A LP SPALN+HLHEE+
Sbjct: 181 TMDLLKKNPDYGRLGKFYEELAAHLPQSPALNVHLHEER 219

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BLAST of CmaCh04G013510 vs. NCBI nr
Match: XP_022990784.1 (uncharacterized protein LOC111487537 isoform X1 [Cucurbita maxima])

HSP 1 Score: 459.1 bits (1180), Expect = 2.2e-125
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MADGAALFSPNTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCE 60
           MADGAALFSPNTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCE
Sbjct: 1   MADGAALFSPNTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCE 60

Query: 61  DDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVS 120
           DDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVS
Sbjct: 61  DDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVS 120

Query: 121 IGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIM 180
           IGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIM
Sbjct: 121 IGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIM 180

Query: 181 AQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           AQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ
Sbjct: 181 AQHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 235

[Close]

BLAST of CmaCh04G013510 vs. NCBI nr
Match: XP_022990940.1 (uncharacterized protein LOC111487537 isoform X3 [Cucurbita maxima] >XP_022991019.1 uncharacterized protein LOC111487537 isoform X3 [Cucurbita maxima])

HSP 1 Score: 429.1 bits (1102), Expect = 2.5e-116
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 17  MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 76
           MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 60

Query: 77  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 136
           SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 137 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 196
           SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ
Sbjct: 121 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 180

Query: 197 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ
Sbjct: 181 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 219

[Close]

BLAST of CmaCh04G013510 vs. NCBI nr
Match: XP_022990860.1 (uncharacterized protein LOC111487537 isoform X2 [Cucurbita maxima])

HSP 1 Score: 429.1 bits (1102), Expect = 2.5e-116
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 13  LFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEG 72
           + + MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEG
Sbjct: 4   ILIWMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEG 63

Query: 73  LEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVS 132
           LEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVS
Sbjct: 64  LEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVS 123

Query: 133 SVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDAN 192
           SVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDAN
Sbjct: 124 SVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDAN 183

Query: 193 TSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           TSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ
Sbjct: 184 TSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 226

[Close]

BLAST of CmaCh04G013510 vs. NCBI nr
Match: KAG6601147.1 (Crossover junction endonuclease MUS81, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419.1 bits (1076), Expect = 2.5e-113
Identity = 217/225 (96.44%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 11  NTLFLAMEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSD 70
           + LFLAMEGTIAEELYSE LQSTKSKLAD+SLSDYRQNR SGSAVNDSCEDDGSLWGGSD
Sbjct: 472 SALFLAMEGTIAEELYSEGLQSTKSKLADISLSDYRQNRSSGSAVNDSCEDDGSLWGGSD 531

Query: 71  EGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRG 130
           EGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRG
Sbjct: 532 EGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRG 591

Query: 131 VSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVD 190
           VSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQ TKEE VD
Sbjct: 592 VSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQCTKEECVD 651

Query: 191 ANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           ANTSSQTIDLLKQNSD SRLGQFYGELQALLPTSPALNLHLHEEQ
Sbjct: 652 ANTSSQTIDLLKQNSDNSRLGQFYGELQALLPTSPALNLHLHEEQ 696

[Close]

BLAST of CmaCh04G013510 vs. NCBI nr
Match: XP_023514291.1 (uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023514300.1 uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.7 bits (1075), Expect = 3.3e-113
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 17  MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 76
           MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 60

Query: 77  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 136
           SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 137 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 196
           SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFH+DIMAQHTKEE VDANTSSQ
Sbjct: 121 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHNDIMAQHTKEECVDANTSSQ 180

Query: 197 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 236
           TIDLLKQNSD SRLG+FYGELQALLPTSPALNLHLHEEQ
Sbjct: 181 TIDLLKQNSDNSRLGKFYGELQALLPTSPALNLHLHEEQ 219

[Close]

BLAST of CmaCh04G013510 vs. TAIR 10
Match: AT1G34570.1 (Essential protein Yae1, N-terminal )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 84/212 (39.62%), Postives = 121/212 (57.08%), Query Frame = 0


Query: 22  AEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEETSDLDR 81
           A+ELY ESLQ +K    D  L +                 D   +G SDE   E   LD 
Sbjct: 12  AKELYGESLQISKLSNKDHGLENL----------------DDPFYGSSDEDYSEARVLDN 71

Query: 82  EWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLASLPDD 141
           E  +R  +FH+ GYRDG++ GKEA +QEG+N G+K+SV  GYK G+VRGVSS LA LP +
Sbjct: 72  ENEQRRVKFHSAGYRDGIVVGKEAIAQEGYNFGYKESVLAGYKFGIVRGVSSALAFLPVE 131

Query: 142 LKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMA----QHTKEEGVDANTSSQT 201
            +EKL+  +E R KFQ L+ SV++LST  A++ F++ +      + + EEG D+ + S +
Sbjct: 132 FREKLIDEQETREKFQKLHSSVHALSTEVAMKQFYETLTTKQGEEKSGEEGPDSCSVSGS 191

Query: 202 IDLLKQNSDYSRLGQFYGELQALLPTSPALNL 230
              +   +D   LG +  EL +LL  SP + +
Sbjct: 192 CSGVNVTAD---LGSYVTELSSLLDKSPTIEV 204

[Close]

BLAST of CmaCh04G013510 vs. TAIR 10
Match: AT3G15750.1 (Essential protein Yae1, N-terminal )

HSP 1 Score: 129.8 bits (325), Expect = 2.9e-30
Identity = 76/182 (41.76%), Postives = 111/182 (60.99%), Query Frame = 0


Query: 52  GSAVNDSCEDDGSLWGGSDEGLEETSDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGF 111
           G +V  S  DD       +E   E   L  E  +R  +FH+ GYRDG++AGKEA +QEG+
Sbjct: 17  GESVQLSKHDDPFYGSSDEEDYSEARVLGNENKQRRVKFHSAGYRDGIVAGKEAIAQEGY 76

Query: 112 NVGFKQSVSIGYKLGLVRGVSSVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADA 171
           N G+K+SV  GY+ GLVRGVSS LA LPD+L+EKL+  +E R KFQ L+ SV++LST  A
Sbjct: 77  NFGYKESVLNGYQFGLVRGVSSALAFLPDELREKLIDKQETREKFQKLHSSVHALSTEVA 136

Query: 172 LRLFHDDIMA----QHTKEEGVDANTSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPAL 230
           ++ F++ +      + + EEG D+ + S +   +   +D   LG +  EL +LL  SP +
Sbjct: 137 MKRFYETLTTKQGEEKSGEEGPDSCSDSGSGSGVNVTTD---LGSYVTELSSLLDKSPTI 195

[Close]

BLAST of CmaCh04G013510 vs. TAIR 10
Match: AT1G34550.1 (Protein of unknown function (DUF616) )

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-07
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 133 SVLASLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDAN 192
           +VLA LPD+L+EKL+  +E R KFQ L+  V++LST  A++ F+  +    T +EG+  +
Sbjct: 3   NVLAFLPDELREKLIDEQETREKFQRLHSYVHALSTEVAMKRFYGAL----TTKEGISGS 62

Query: 193 TSSQTIDLLKQNSDYSRLGQFYGELQALLPTSPAL 228
             + T D           G +  EL +LL  SP +
Sbjct: 63  GVNATSD----------WGSYVTELSSLLEKSPKI 83

The following BLAST results are available for this feature:

BLAST of CmaCh04G013510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NRH1	9.1e-05	38.24	Protein YAE1 homolog OS=Homo sapiens OX=9606 GN=YAE1 PE=1 SV=1	[more]

BLAST of CmaCh04G013510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSZ3	1.1e-125	100.00	uncharacterized protein LOC111487537 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JRH1	1.2e-116	100.00	uncharacterized protein LOC111487537 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JR95	1.2e-116	98.21	uncharacterized protein LOC111487537 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H273	5.2e-112	97.26	uncharacterized protein LOC111458903 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A1S4DX60	3.6e-97	83.56	uncharacterized protein LOC103489487 OS=Cucumis melo OX=3656 GN=LOC103489487 PE=...	[more]

BLAST of CmaCh04G013510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990784.1	2.2e-125	100.00	uncharacterized protein LOC111487537 isoform X1 [Cucurbita maxima]	[more]
XP_022990940.1	2.5e-116	100.00	uncharacterized protein LOC111487537 isoform X3 [Cucurbita maxima] >XP_022991019...	[more]
XP_022990860.1	2.5e-116	98.21	uncharacterized protein LOC111487537 isoform X2 [Cucurbita maxima]	[more]
KAG6601147.1	2.5e-113	96.44	Crossover junction endonuclease MUS81, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023514291.1	3.3e-113	98.17	uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CmaCh04G013510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34570.1	1.1e-32	39.62	Essential protein Yae1, N-terminal	[more]
AT3G15750.1	2.9e-30	41.76	Essential protein Yae1, N-terminal	[more]
AT1G34550.1	2.0e-07	35.79	Protein of unknown function (DUF616)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..73
IPR019191	Essential protein Yae1, N-terminal	PFAM	PF09811	Yae1_N	coord: 94..131 e-value: 1.1E-9 score: 37.8
IPR038881	Yae1-like	PANTHER	PTHR18829	PROTEIN YAE1 HOMOLOG	coord: 53..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G013510.1	CmaCh04G013510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0004386	helicase activity