CmaCh04G011470 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G011470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	17.8 kDa class I heat shock protein-like
Location	Cma_Chr04: 5884591 .. 5886456 (+)
RNA-Seq Expression	CmaCh04G011470
Synteny	CmaCh04G011470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGGGATTGGGGCTCAAGTATTGTGCAGAATGGGTCCAAATCCATGGAAGAAGTTGGAAGCTTATGGAAATCAGCTTTATACTTCTAGTACGATGACGGGGATTGGGGCTCAAGTATTGTGCAGAATGGGTCCAAATCCATGGAAGAAGTTGGAAGCTTATGGAAATCAGAAAAGCTGAAGGGGATAATGCGAGAAAGCCCAGGAAAGCTCTCGCATCTTCTGCTGCACCCTATTCAAATGGCTGAGGCCCAAGGGCGGAAGAGCATCGAAAGCAGTGGCGAAGTCATTGTACAGCTCTGATTCCAAGCACTTTTGGTGGCCACCGAAGCAACATCTTCGACCCCTGTTGAATGAACGTTTGGGATTCTTTTGATTGGGATTCTTTTGAAGGCTTTTGAAGGCTTCTCGTTTTCAAGCTCATTGGCCAACGCCCCTTCCTCTGCTCGGGAGACCTCTGCTTCTGCCAACACTCGCATCGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCAGATCTTCCAGGGATTCCTCCTCCTTAAAGTTGAAGAAGGCAGAGTTGCGCAGATCAGTGGAGAGAGGAGAAGAATGATAAATGGCATAGAGTGGAAGGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCTGAGAACGCGAAGGTTGAGAAGGTGAAGGCGAGCATGGAGAAGGGAGTTGTAACAGTGAGAGTGCCGAAAATGGAAGAGAAGAAGCCAGAAATTAAGTCGATTGACAGCTGTGGGTAGACAATCTTCATCCTGACAGGCAGCCCATGTATAGATCAATTCGCATAGGAATGAAGTTCACCTGTCTTGTGTTCTGCAATGTGAATTGACTTTGTAATCGAACATGAAAAAGGTTTGTTTGGGTGCGTGTGATGAAAATGAAAACAATGCAAGTTATCCGGGTTGAATGAATTTTAAATGGTTTCAATCAGATCCGGCCGAGTCGGATTCACAACATAACAGTGATACTAATGGAATCAGAGAAAATCAGATCAATTCTCTTACTGATGATATGGTTGAAGGAATTCAAGAGTAGAATGGAATAAGCACTATGAACCAAATTCTTGATTTCGAGCACAATTAGAAACTTAAAAATTATTTAATTACCATATATTTTCTTTTACACATTCTTTTTCATAGATCATAAACAAAACCGAAACAGCCCACAAAAAGACCGGAAATTACAAACCCTTTTCTTCATCCTTTTCACATTGAAAAACATTTGTAGAAAACATCAAAATCAGAAACCCACCCATTTCAACGACTTACTTCTGCCCGATCAGGAAGGAGCAGAAGAACCAACCGTGTTTAACCAGAGATCTCAATGCTCTTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACTCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGGCAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAACTCTATGCCACTTCTCGTTCTTCTCCTCCTGCTCTTTGCTTCTCTCTCCGCTGATCTGCAGAACTCCCCCTTCTTCAATTTCAACCTTCACTTCCTCCTTTTTGATCCCCGGAAGATCCGCCTTGAACATGTGAGCTTCTGGGGTCTCCTTCCAGTCGATTCGAGTGTTGGCAAAAGCAGAGGTCTCACGAGCAGAGGAAGGGGCGTTGGCCAGTGAGCTTGAAAATGGGAAGCCCTCGAAAGGATCCCAGACGTCCAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCGAAAATGCTTGGGATCAGCGACATTGTTGTTGGTGAATTAGAGTGTAGAATTGCTGAAACTGCGAAATAA

mRNA sequence

ATGACGGGGATTGGGGCTCAATACGATGACGGGGATTGGGGCTCAAGTATTGTGCAGAATGGGTCCAAATCCATGGAAGAAGTTGGAAGCTTATGGAAATCAGAAAAGCTGAAGGGGATAATGCGAGAAAGCCCAGGAAAGCTCTCGCATCTTCTGCTGCACCCTATTCAAATGGCTGAGGCCCAAGGGCGGAAGAGCATCGAAAGCAGTGGCGAAGCTTCTCGTTTTCAAGCTCATTGGCCAACGCCCCTTCCTCTGCTCGGGAGACCTCTGCTTCTGCCAACACTCGCATCGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCAGATCTTCCAGGGATTCCTCCTCCTTAAAAGTTGCGCAGATCAGTGGAGAGAGGAGAAGAATGATAAATGGCATAGAGTGGAAGGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCTGAGAACGCGAAGGTTGAGAAGGTGAAGGCGAGCATGGAGAAGGGAGTTGTAACAGTGAGAGTGCCGAAAATGGAAGAGAAGAAGCCAGAAATTAAGTCGATTGACAGCTATCCGGCCGAGTCGGATTCACAACATAACAGTGATACTAATGGAATCAGAGAAAATCAGATCAATTCTCTTACTGATGATATGGTTGAAGGAATTCAAGAAAACCCACCCATTTCAACGACTTACTTCTGCCCGATCAGGAAGGAGCAGAAGAACCAACCGTGTTTAACCAGAGATCTCAATGCTCTTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACTCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGGCAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAACTCTATGCCACTTCTCGTTCTTCTCCTCCTGCTCTTTGCTTCTCTCTCCGCTGATCTGCAGAACTCCCCCTTCTTCAATTTCAACCTTCACTTCCTCCTTTTTGATCCCCGGAAGATCCGCCTTGAACATTCGATTCGAGTGTTGGCAAAAGCAGAGGTCTCACGAGCAGAGGAAGGGGCGTTGGCCAGTGAGCTTGAAAATGGGAAGCCCTCGAAAGGATCCCAGACGTCCAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCGAAAATGCTTGGGATCAGCGACATTGTTGTTGGTGAATTAGAGTGTAGAATTGCTGAAACTGCGAAATAA

Coding sequence (CDS)

ATGACGGGGATTGGGGCTCAATACGATGACGGGGATTGGGGCTCAAGTATTGTGCAGAATGGGTCCAAATCCATGGAAGAAGTTGGAAGCTTATGGAAATCAGAAAAGCTGAAGGGGATAATGCGAGAAAGCCCAGGAAAGCTCTCGCATCTTCTGCTGCACCCTATTCAAATGGCTGAGGCCCAAGGGCGGAAGAGCATCGAAAGCAGTGGCGAAGCTTCTCGTTTTCAAGCTCATTGGCCAACGCCCCTTCCTCTGCTCGGGAGACCTCTGCTTCTGCCAACACTCGCATCGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCAGATCTTCCAGGGATTCCTCCTCCTTAAAAGTTGCGCAGATCAGTGGAGAGAGGAGAAGAATGATAAATGGCATAGAGTGGAAGGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCTGAGAACGCGAAGGTTGAGAAGGTGAAGGCGAGCATGGAGAAGGGAGTTGTAACAGTGAGAGTGCCGAAAATGGAAGAGAAGAAGCCAGAAATTAAGTCGATTGACAGCTATCCGGCCGAGTCGGATTCACAACATAACAGTGATACTAATGGAATCAGAGAAAATCAGATCAATTCTCTTACTGATGATATGGTTGAAGGAATTCAAGAAAACCCACCCATTTCAACGACTTACTTCTGCCCGATCAGGAAGGAGCAGAAGAACCAACCGTGTTTAACCAGAGATCTCAATGCTCTTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACTCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGGCAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAACTCTATGCCACTTCTCGTTCTTCTCCTCCTGCTCTTTGCTTCTCTCTCCGCTGATCTGCAGAACTCCCCCTTCTTCAATTTCAACCTTCACTTCCTCCTTTTTGATCCCCGGAAGATCCGCCTTGAACATTCGATTCGAGTGTTGGCAAAAGCAGAGGTCTCACGAGCAGAGGAAGGGGCGTTGGCCAGTGAGCTTGAAAATGGGAAGCCCTCGAAAGGATCCCAGACGTCCAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCGAAAATGCTTGGGATCAGCGACATTGTTGTTGGTGAATTAGAGTGTAGAATTGCTGAAACTGCGAAATAA

Protein sequence

MTGIGAQYDDGDWGSSIVQNGSKSMEEVGSLWKSEKLKGIMRESPGKLSHLLLHPIQMAEAQGRKSIESSGEASRFQAHWPTPLPLLGRPLLLPTLASTGKRPQKPTSSRQIFQGFLLLKSCADQWREEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSIDSYPAESDSQHNSDTNGIRENQINSLTDDMVEGIQENPPISTTYFCPIRKEQKNQPCLTRDLNALDFWLLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLLVLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEHSIRVLAKAEVSRAEEGALASELENGKPSKGSQTSKEKGSKTLLRRPPKMLGISDIVVGELECRIAETAK

Homology

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BLAST of CmaCh04G011470 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 3.9e-19
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSID 187
           EEKNDKWHRVE SSGKF RRFRLPENAK+E++KASME GV++V VPK+ EKKPE+KSID
Sbjct: 96  EEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSID 154

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BLAST of CmaCh04G011470 vs. ExPASy Swiss-Prot
Match: Q943E7 (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.6e-19
Identity = 47/70 (67.14%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 117 LLLKSCADQWREEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKME 176
           L++     + +E+KNDKWHRVE SSG+FMRRFRLPENAKV++VKASME GV+TV VPK E
Sbjct: 77  LVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAE 136

Query: 177 EKKPEIKSID 187
            KKPE+K+I+
Sbjct: 137 VKKPEVKAIE 146

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BLAST of CmaCh04G011470 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.6e-19
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSID 187
           EEKNDKWHRVE +SGKFMRRFRLPENAK+E+VKA+ME GV+TV VPK  EKKP++KSID
Sbjct: 98  EEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSID 156

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BLAST of CmaCh04G011470 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.6e-19
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 127 REEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSID 186
           +EEKNDKWHRVE SSGKF+RRFRLPENAKV++VKA+M  GVVTV VPK+E KKPE+K+ID
Sbjct: 95  KEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAID 154

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BLAST of CmaCh04G011470 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSID 187
           EEK+D WHRVE SSGKFMRRFRLPENAKVE+VKASME GV++V VPK++E KPE+KS+D
Sbjct: 95  EEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVD 153

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BLAST of CmaCh04G011470 vs. ExPASy TrEMBL
Match: A0A6J1GY40 (uncharacterized protein LOC111458525 OS=Cucurbita moschata OX=3662 GN=LOC111458525 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-39
Identity = 90/119 (75.63%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 243 LTRDLNALDFWLLHFHFGHRHRQHSILHVGLHLFYFRI---------------------- 302
           LTRD NAL FWLLH HF H HRQHSILHVGLHLFYFRI                      
Sbjct: 11  LTRDFNALHFWLLHLHFRHCHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLVV 70

Query: 303 LRQPESPHELPTASFNSMPLLVLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEH 340
           LRQPESPHELPTASFNSMPL+VLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRL+H
Sbjct: 71  LRQPESPHELPTASFNSMPLVVLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLQH 129

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BLAST of CmaCh04G011470 vs. ExPASy TrEMBL
Match: A0A103YIQ4 (Alpha crystallin/Hsp20 domain-containing protein (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_011723 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.7e-33
Identity = 100/238 (42.02%), Postives = 129/238 (54.20%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSIDS 187
           E+K D WHRVE SSGKFMRRFRLP+NAKV++VKASME GV+TV VPK+E KKPE+KSI  
Sbjct: 100 EDKGDTWHRVERSSGKFMRRFRLPDNAKVDEVKASMENGVLTVTVPKVEMKKPEVKSI-- 159

Query: 188 YPAESDSQHNSDTNGIRENQINSLTDDMVEGIQENPPISTTYFCPIRKEQKNQPCLTRDL 247
                      + +G R                                      L  D+
Sbjct: 160 -----------NISGARN-------------------------------------LAGDI 219

Query: 248 NALDFWLLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLLVLLLLL 307
           N L   LL    GH +RQH++ H G +L ++R+LRQPE   +LP A  + +PL++LLLL 
Sbjct: 220 NGLHHRLLLLLLGHAYRQHAVFHGGCYLIHYRVLRQPEPSQKLPGAPLDPVPLIILLLLF 279

Query: 308 FASLSADLQNSPFFNFNLHFLLFDPRKIRLEH-SIRVLAKAEVSRAEEGALASELENG 365
            A LSA LQ+  F N +LHF L  P ++RLEH S R L   + S   +G    E+  G
Sbjct: 280 TAPLSAYLQHPSFLNLHLHFFLLQPWQVRLEHMSFRRLLPVD-SGVGDGCCFPEVAKG 286

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BLAST of CmaCh04G011470 vs. ExPASy TrEMBL
Match: A0A4D8Z687 (HSP20 family protein OS=Salvia splendens OX=180675 GN=HSP20 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.8e-27
Identity = 106/274 (38.69%), Postives = 138/274 (50.36%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPE--IKSI 187
           EEKND WHRVE       RRFR PENAK+E+VKA+ME GV+TV VPK E KKP+   K I
Sbjct: 60  EEKNDTWHRVE-------RRFRQPENAKLEQVKAAMEDGVLTVTVPKEEVKKPQHSFKII 119

Query: 188 DSYPAESDSQHNSDTNGIRENQINSLTDDMVEGIQENPPISTTYFCPIRKEQKNQPCLTR 247
            S                                                         R
Sbjct: 120 FS--------------------------------------------------------AR 179

Query: 248 DLNALDFWLLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLLVLLL 307
           D+N+ D  LL    GH H QH ILH  L+L    +LR+ E+P EL  A  +++P ++LLL
Sbjct: 180 DINSFDLRLL----GHGHGQHPILHTRLNLISLSVLREAEAPEELARAPLDAVPGVILLL 239

Query: 308 LLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEH-SIRVLAKAEVSRAEEGALASELENG 367
           LL A+L+ADL++ PF +  L  LL +   + LEH  +R L     SR+E   L +     
Sbjct: 240 LLTAALAADLEDIPFLHLYLDLLLPEAGHVGLEHVGLRCLLPVHASRSELRRLVA----- 258

Query: 368 KPSKGSQTSKEKGSKTLLRRPPKMLGISDIVVGE 399
           K  KGS  S+EKGS+  L+R PK LG+SDI +G+
Sbjct: 300 KSRKGSHRSREKGSE--LQR-PKKLGMSDIAIGD 258

[Close]

BLAST of CmaCh04G011470 vs. ExPASy TrEMBL
Match: A0A7J6DTM8 (Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_026241 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-26
Identity = 76/151 (50.33%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 244 TRDLNALDFWLLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLLVL 303
           TR  N  D       FG  + ++SILH    L +F ILR+PE PHELP A  + +P +VL
Sbjct: 25  TRYFNGFDIRFFDLLFGDCNGKNSILHSSFDLIHFYILRKPEPPHELPAAPLHPVPRVVL 84

Query: 304 LLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEHSIRVLAKAEVSRAEEGALASELEN 363
           + LL   LSAD+++S  F+ +LH  L  PR I  EHS R L KAE S    G    EL+ 
Sbjct: 85  IFLLNVPLSADVEDSIIFDLHLHLFLLQPRNIGSEHSTRALTKAEFSSDSFG--KDELDK 144

Query: 364 GKPSKGSQTSKEKGSKTLLRRPPKMLGISDI 395
           GK   GSQTS+EKGSKTLLRRPPK LG+SD+
Sbjct: 145 GKSLNGSQTSREKGSKTLLRRPPKKLGMSDM 173

[Close]

BLAST of CmaCh04G011470 vs. ExPASy TrEMBL
Match: A0A443NSS8 (Alpha crystallin/Hsp20 domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01025800 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.7e-20
Identity = 78/157 (49.68%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 246 DLNALDFW-LLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLLVLL 305
           DLN+ D   LLHF F H + +H I H  L L   RIL Q E   EL +A  N+MPL+ LL
Sbjct: 76  DLNSFDLGVLLHFLFWHSNSKHPIFHTSLDLANLRILGQSEPSKELSSAPLNAMPLVRLL 135

Query: 306 LLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEH-------SIRVLAKAEVSRAEEGAL 365
           LLLFASLSA L+NS FF+ +LHF   D RKI  E         I ++   E     +G  
Sbjct: 136 LLLFASLSAYLKNSSFFHLHLHFFFLDTRKISFEDMGFWGFLPIDLMVSLE-KVGSDGVK 195

Query: 366 ASELENGKPSKGSQTSKEKGSKTLLRRPPKMLGISDI 395
           AS+L N  PSKGS  S+EKGSK L+RR PK LG+ DI
Sbjct: 196 ASKL-NVIPSKGSHMSREKGSKMLVRR-PKKLGMIDI 229

[Close]

BLAST of CmaCh04G011470 vs. NCBI nr
Match: XP_022957031.1 (uncharacterized protein LOC111458525 [Cucurbita moschata])

HSP 1 Score: 172.6 bits (436), Expect = 7.2e-39
Identity = 90/119 (75.63%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 243 LTRDLNALDFWLLHFHFGHRHRQHSILHVGLHLFYFRI---------------------- 302
           LTRD NAL FWLLH HF H HRQHSILHVGLHLFYFRI                      
Sbjct: 11  LTRDFNALHFWLLHLHFRHCHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLVV 70

Query: 303 LRQPESPHELPTASFNSMPLLVLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEH 340
           LRQPESPHELPTASFNSMPL+VLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRL+H
Sbjct: 71  LRQPESPHELPTASFNSMPLVVLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLQH 129

[Close]

BLAST of CmaCh04G011470 vs. NCBI nr
Match: KVI09866.1 (Alpha crystallin/Hsp20 domain-containing protein, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 152.5 bits (384), Expect = 7.7e-33
Identity = 100/238 (42.02%), Postives = 129/238 (54.20%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSIDS 187
           E+K D WHRVE SSGKFMRRFRLP+NAKV++VKASME GV+TV VPK+E KKPE+KSI  
Sbjct: 100 EDKGDTWHRVERSSGKFMRRFRLPDNAKVDEVKASMENGVLTVTVPKVEMKKPEVKSI-- 159

Query: 188 YPAESDSQHNSDTNGIRENQINSLTDDMVEGIQENPPISTTYFCPIRKEQKNQPCLTRDL 247
                      + +G R                                      L  D+
Sbjct: 160 -----------NISGARN-------------------------------------LAGDI 219

Query: 248 NALDFWLLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLLVLLLLL 307
           N L   LL    GH +RQH++ H G +L ++R+LRQPE   +LP A  + +PL++LLLL 
Sbjct: 220 NGLHHRLLLLLLGHAYRQHAVFHGGCYLIHYRVLRQPEPSQKLPGAPLDPVPLIILLLLF 279

Query: 308 FASLSADLQNSPFFNFNLHFLLFDPRKIRLEH-SIRVLAKAEVSRAEEGALASELENG 365
            A LSA LQ+  F N +LHF L  P ++RLEH S R L   + S   +G    E+  G
Sbjct: 280 TAPLSAYLQHPSFLNLHLHFFLLQPWQVRLEHMSFRRLLPVD-SGVGDGCCFPEVAKG 286

[Close]

BLAST of CmaCh04G011470 vs. NCBI nr
Match: KAG6600961.1 (18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 7.5e-28
Identity = 106/277 (38.27%), Postives = 125/277 (45.13%), Query Frame = 0


Query: 115 GFLLLKSCADQWREEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPK 174
           G L +     + +EEKNDKWHR+E SSGKFMRRFRLPENAKVE+VKA+ME GV+TV VPK
Sbjct: 85  GVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRLPENAKVEEVKANMENGVLTVTVPK 144

Query: 175 MEEKKPEIKSIDSYPAESDSQHNSDTNGIRENQINSLTDDMVEGIQENPPISTTYFCPIR 234
           ME KKPE+KSI+                       S+ ++   G +      +++  P R
Sbjct: 145 MEVKKPEMKSIEI----------------------SVEEETKRGRR-----CSSFLIPGR 204

Query: 235 KEQKNQPCLTRDLNALDFWLLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTAS 294
                        +AL  W     F                                   
Sbjct: 205 -------------SALKMWASGVSF----------------------------------- 242

Query: 295 FNSMPLLVLLLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEHSIRVLAKAEVSRAEE 354
                                                        S+RVLAKAEVSRAEE
Sbjct: 265 --------------------------------------------QSMRVLAKAEVSRAEE 242

Query: 355 GALASELENGKPSKGSQTSKEKGSKTLLRRPPKMLGI 392
           GALA E+ENGKPSKGSQTS EKGSK LLRRPPKMLGI
Sbjct: 325 GALADEVENGKPSKGSQTSNEKGSKMLLRRPPKMLGI 242

[Close]

BLAST of CmaCh04G011470 vs. NCBI nr
Match: KAF4349461.1 (hypothetical protein G4B88_026241, partial [Cannabis sativa])

HSP 1 Score: 129.8 bits (325), Expect = 5.4e-26
Identity = 76/151 (50.33%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 244 TRDLNALDFWLLHFHFGHRHRQHSILHVGLHLFYFRILRQPESPHELPTASFNSMPLLVL 303
           TR  N  D       FG  + ++SILH    L +F ILR+PE PHELP A  + +P +VL
Sbjct: 25  TRYFNGFDIRFFDLLFGDCNGKNSILHSSFDLIHFYILRKPEPPHELPAAPLHPVPRVVL 84

Query: 304 LLLLFASLSADLQNSPFFNFNLHFLLFDPRKIRLEHSIRVLAKAEVSRAEEGALASELEN 363
           + LL   LSAD+++S  F+ +LH  L  PR I  EHS R L KAE S    G    EL+ 
Sbjct: 85  IFLLNVPLSADVEDSIIFDLHLHLFLLQPRNIGSEHSTRALTKAEFSSDSFG--KDELDK 144

Query: 364 GKPSKGSQTSKEKGSKTLLRRPPKMLGISDI 395
           GK   GSQTS+EKGSKTLLRRPPK LG+SD+
Sbjct: 145 GKSLNGSQTSREKGSKTLLRRPPKKLGMSDM 173

[Close]

BLAST of CmaCh04G011470 vs. NCBI nr
Match: KAF9661607.1 (hypothetical protein SADUNF_Sadunf19G0086500 [Salix dunnii])

HSP 1 Score: 109.8 bits (273), Expect = 5.7e-20
Identity = 70/132 (53.03%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 65  KSIESSGEASRFQAHWP----------TPLPLLGRPLLLPTLASTGKRPQKPTSSRQIFQ 124
           K+IE S EA  F  H P           PL    R   L TLAS GKRPQKP   R IF 
Sbjct: 121 KAIEISDEAPSF-IHSPGNPSRTSLSLHPLSSHMRTQPLLTLASIGKRPQKPMFLRPIF- 180

Query: 125 GFLLLKSCADQWREEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPK 184
              L+       +E+K+D WHRVE SSGKF+RRFRLPENAKV++V+ASME GV+TV VPK
Sbjct: 181 ---LISGERSVDKEDKSDTWHRVERSSGKFLRRFRLPENAKVDQVRASMENGVLTVTVPK 240

Query: 185 MEEKKPEIKSID 187
            E KKP++K+I+
Sbjct: 241 EEVKKPDVKAIE 247

[Close]

BLAST of CmaCh04G011470 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.7e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSID 187
           EEKNDKWHRVE SSGKF RRFRLPENAK+E++KASME GV++V VPK+ EKKPE+KSID
Sbjct: 96  EEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSID 154

[Close]

BLAST of CmaCh04G011470 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 96.7 bits (239), Expect = 4.7e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSID 187
           EEKNDKWHRVE +SGKFMRRFRLPENAK+E+VKA+ME GV+TV VPK  EKKP++KSID
Sbjct: 98  EEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSID 156

[Close]

BLAST of CmaCh04G011470 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 95.9 bits (237), Expect = 8.0e-20
Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 128 EEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSID 187
           EEK+D WHRVE SSGKFMRRFRLPENAKVE+VKASME GV++V VPK++E KPE+KS+D
Sbjct: 95  EEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVD 153

[Close]

BLAST of CmaCh04G011470 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-16
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 127 REEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEEKKPEIKSI 186
           +E+KND WHRVE SSG+F RRFRLPEN K+++VKA+ME GV+TV VPK E KK ++KSI
Sbjct: 91  KEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSI 149

[Close]

BLAST of CmaCh04G011470 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-15
Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 127 REEKNDKWHRVEGSSGKFMRRFRLPENAKVEKVKASMEKGVVTVRVPKMEE--KKPEIKS 186
           +EEK D WHRVE SSG+F R+F+LPEN K+++VKASME GV+TV VPK+EE  KK ++KS
Sbjct: 93  KEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKS 152

The following BLAST results are available for this feature:

BLAST of CmaCh04G011470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13853	3.9e-19	79.66	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
Q943E7	6.6e-19	67.14	16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P19037	6.6e-19	79.66	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27396	6.6e-19	78.33	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P19036	1.1e-18	77.97	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]

BLAST of CmaCh04G011470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY40	3.5e-39	75.63	uncharacterized protein LOC111458525 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]
A0A103YIQ4	3.7e-33	42.02	Alpha crystallin/Hsp20 domain-containing protein (Fragment) OS=Cynara cardunculu...	[more]
A0A4D8Z687	6.8e-27	38.69	HSP20 family protein OS=Salvia splendens OX=180675 GN=HSP20 PE=3 SV=1	[more]
A0A7J6DTM8	2.6e-26	50.33	Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_026241 PE...	[more]
A0A443NSS8	4.7e-20	49.68	Alpha crystallin/Hsp20 domain-containing protein OS=Cinnamomum micranthum f. kan...	[more]

BLAST of CmaCh04G011470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957031.1	7.2e-39	75.63	uncharacterized protein LOC111458525 [Cucurbita moschata]	[more]
KVI09866.1	7.7e-33	42.02	Alpha crystallin/Hsp20 domain-containing protein, partial [Cynara cardunculus va...	[more]
KAG6600961.1	7.5e-28	38.27	18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
KAF4349461.1	5.4e-26	50.33	hypothetical protein G4B88_026241, partial [Cannabis sativa]	[more]
KAF9661607.1	5.7e-20	53.03	hypothetical protein SADUNF_Sadunf19G0086500 [Salix dunnii]	[more]

BLAST of CmaCh04G011470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	2.7e-20	79.66	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	4.7e-20	79.66	heat shock protein 18.2	[more]
AT3G46230.1	8.0e-20	77.97	heat shock protein 17.4	[more]
AT2G29500.1	3.1e-16	67.80	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.6e-15	66.13	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 124..185 e-value: 7.3E-15 score: 55.0
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 47..191 score: 14.295244
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 99..186 e-value: 2.0E-19 score: 71.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 116..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..204
None	No IPR available	PANTHER	PTHR11527:SF313	HSP20-LIKE CHAPERONE-RELATED	coord: 127..186
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 127..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G011470.1	CmaCh04G011470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding