CmaCh04G011460 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G011460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	17.8 kDa class I heat shock protein-like
Location	Cma_Chr04: 5883316 .. 5884155 (+)
RNA-Seq Expression	CmaCh04G011460
Synteny	CmaCh04G011460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTAGAAAATTCCAAAATCTTCTGGACCAATTGGGTAAGTTCATTGTTCTGTTTTTTGAATAAGCAAAGAAGCCCATAGTTGAGGCCCAATGAAACTATGGATTGGATCGGAATTACTGTGCAGAGTTGGTCCAAATCCATCCAGAACATGGTAGAAGCTTGTGGACAATCCAGGAAAGGAAGAGGGGAGAAGATACTAGAAAAGCCACGACACCACTCGCATGCTCTGTTTCTTCCTATTTAAATACCTTGATCCCAGGGGTGGAAGCGCATCGACAAACACAGCAAACAAAATTCCAATTCTATCATTCTCAACTATCAGTTTCAGCAATTCTACTATCTAATTCACCAACAAAGATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGTAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCGAGCTCACTGGCCAACGTCCCCTCCTCTGCTCGTGAGACCTCTGCTTTTGCGAACACCCGCATCGACTGGAAGGAGACCCCGGAAGCCCACATCTTCAAGGCGGATCTTCCGGGGATAAAAAAGGAGGAGGTGAAAGTTGAAGTTGAAGAGGGGGGAGTGCTGCAGATCAGTGGAGAGAGGAGCAAGGAACAGGAGGAGAAAAACGACAAGTGGCATAGAATTGAACGAAGCAGTGGGAAGTTCCTGAGGAGGTTCAGGCTGCCGGAGAACGCAAAAGCAGGAGAGGTGAAGGCGAGCATGGAGAATGGAGTGCTGACGGTGACAGTGCCTAAGATGGAAGTGAAGAAACCGGAAATCAAGACCATTGACATCTCCGGCTGA

mRNA sequence

ATGCGTAGAAAATTCCAAAATCTTCTGGACCAATTGGAGTTGGTCCAAATCCATCCAGAACATGGTAGAAGCTTGTGGACAATCCAGGAAAGGAAGAGGGGAGAAGATACTAGAAAAGCCACGACACCACTCGCATGCTCTGTTTCTTCCTATTTAAATACCTTGATCCCAGGGGTGGAAGCGCATCGACAAACACAGCAAACAAAATTCCAATTCTATCATTCTCAACTATCAGTTTCAGCAATTCTACTATCTAATTCACCAACAAAGATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGTAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCGAGCTCACTGGCCAACGTCCCCTCCTCTGCTCGTGAGACCTCTGCTTTTGCGAACACCCGCATCGACTGGAAGGAGACCCCGGAAGCCCACATCTTCAAGGCGGATCTTCCGGGGATAAAAAAGGAGGAGGTGAAAGTTGAAGTTGAAGAGGGGGGAGTGCTGCAGATCAGTGGAGAGAGGAGCAAGGAACAGGAGGAGAAAAACGACAAGTGGCATAGAATTGAACGAAGCAGTGGGAAGTTCCTGAGGAGGTTCAGGCTGCCGGAGAACGCAAAAGCAGGAGAGGTGAAGGCGAGCATGGAGAATGGAGTGCTGACGGTGACAGTGCCTAAGATGGAAGTGAAGAAACCGGAAATCAAGACCATTGACATCTCCGGCTGA

Coding sequence (CDS)

ATGCGTAGAAAATTCCAAAATCTTCTGGACCAATTGGAGTTGGTCCAAATCCATCCAGAACATGGTAGAAGCTTGTGGACAATCCAGGAAAGGAAGAGGGGAGAAGATACTAGAAAAGCCACGACACCACTCGCATGCTCTGTTTCTTCCTATTTAAATACCTTGATCCCAGGGGTGGAAGCGCATCGACAAACACAGCAAACAAAATTCCAATTCTATCATTCTCAACTATCAGTTTCAGCAATTCTACTATCTAATTCACCAACAAAGATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGTAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCGAGCTCACTGGCCAACGTCCCCTCCTCTGCTCGTGAGACCTCTGCTTTTGCGAACACCCGCATCGACTGGAAGGAGACCCCGGAAGCCCACATCTTCAAGGCGGATCTTCCGGGGATAAAAAAGGAGGAGGTGAAAGTTGAAGTTGAAGAGGGGGGAGTGCTGCAGATCAGTGGAGAGAGGAGCAAGGAACAGGAGGAGAAAAACGACAAGTGGCATAGAATTGAACGAAGCAGTGGGAAGTTCCTGAGGAGGTTCAGGCTGCCGGAGAACGCAAAAGCAGGAGAGGTGAAGGCGAGCATGGAGAATGGAGTGCTGACGGTGACAGTGCCTAAGATGGAAGTGAAGAAACCGGAAATCAAGACCATTGACATCTCCGGCTGA

Protein sequence

MRRKFQNLLDQLELVQIHPEHGRSLWTIQERKRGEDTRKATTPLACSVSSYLNTLIPGVEAHRQTQQTKFQFYHSQLSVSAILLSNSPTKMSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETPEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRLPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG

Homology

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BLAST of CmaCh04G011460 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.4e-66
Identity = 124/159 (77.99%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MS+IPS FGGRRSNVFDPFSLDVWDPF+ FP  +S A+     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AH+FKADLPG+KKEEVKVE+EEG VLQISGER+KE+EEKNDKWHR+ERSSGKFLRRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKA+M NGV+TVTVPK+E+KKPE+K IDISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of CmaCh04G011460 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.4e-66
Identity = 125/159 (78.62%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPS FGGRRSNVFDPFSLDVWDPF+ FPF++S  +  S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPG+KKEEVKVE+E+  VLQISGERS E+E+KND+WHR+ERSSGKF+RRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  +VKA+MENGVLTVTVPK EVKKPE+KTIDISG
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of CmaCh04G011460 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.3e-65
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEG-FPFSSSLANVPSSARETSAFANTRIDWKET 150
           MSLIPSIFGGRRSNVFDPFS D+WDPFEG F  SS+LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 151 PEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFR 210
           PEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 211 LPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           LPENAK  EVKA+MENGVLTV VPK   KKP++K+IDISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-64
Identity = 122/159 (76.73%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRR+NVFDPFSLDV+DPFEGF   S LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  E+KASMENGVL+VTVPK+  KKPE+K+IDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh04G011460 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.1e-64
Identity = 119/161 (73.91%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSL--ANVPSSARETSAFANTRIDWKE 150
           MSLIP+ FGGRR+NVFDPFSLDVWDPF+ FPF ++L  A+ P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 151 TPEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRF 210
           TPEAH+FKAD+PG+KKEEVKV++E+  VLQISGER+ E+E+KND WHR+ERSSGKF+RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 211 RLPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           RLPENAK  +VKASMENGVLTVTVPK EVKKP++K I+ISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of CmaCh04G011460 vs. ExPASy TrEMBL
Match: A0A6J1GY40 (uncharacterized protein LOC111458525 OS=Cucurbita moschata OX=3662 GN=LOC111458525 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.7e-82
Identity = 166/196 (84.69%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 63  RQTQQTKFQFYHSQLSVSAILLSNSP-TKMSLIPSIFGGRRSNVFDPFSLDVWDPFEGFP 122
           RQTQQT+FQFY SQ+S+SAILLSNSP T M+LIPSIFGGRRSNVFDPFSLDVWDPFEG P
Sbjct: 155 RQTQQTEFQFYQSQVSLSAILLSNSPTTTMALIPSIFGGRRSNVFDPFSLDVWDPFEGLP 214

Query: 123 FSSSLANVPSSARETSAFANTRIDWKETPEAHIFKADLPGIKKEEVKVEV--------EE 182
           FSSSLANVPSS    SAFANTRIDWKETPEAH+ KADLPGIKKEEVKVE+        EE
Sbjct: 215 FSSSLANVPSS----SAFANTRIDWKETPEAHVLKADLPGIKKEEVKVEIEEGGVLXXEE 274

Query: 183 GGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRLPENAKAGEVKASMENGVLTVTVP 242
           GGVLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRLPENAK  EVKA+MENGVLTVTVP
Sbjct: 275 GGVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRLPENAKVEEVKANMENGVLTVTVP 334

Query: 243 KMEVKKPEIKTIDISG 250
           KMEVKKPE+++IDISG
Sbjct: 335 KMEVKKPEVRSIDISG 346

[Close]

BLAST of CmaCh04G011460 vs. ExPASy TrEMBL
Match: A0A6J1ILY5 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478213 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.7e-81
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG
Sbjct: 121 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. ExPASy TrEMBL
Match: A0A6J1H0S8 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111458527 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.9e-80
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSA ETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSASETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG
Sbjct: 121 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. ExPASy TrEMBL
Match: A0A6J1ILW3 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478197 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.8e-78
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLAN PSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANAPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPGIKKEEVKVE+EEGGVLQISGERSKEQEEKN+KWHRIERSSGKF+RRFRL
Sbjct: 61  EAHVFKADLPGIKKEEVKVEIEEGGVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKA+MENGVLTVTVPKMEVKKPEIK IDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEVKKPEIKAIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. ExPASy TrEMBL
Match: A0A6J1IKB6 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478205 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.7e-77
Identity = 147/159 (92.45%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLAN PSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANAPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPGIKKEEVKVE+EEGGVLQISGERSKEQEEKN+KWHR+ERSSGKF+RRFRL
Sbjct: 61  EAHMFKADLPGIKKEEVKVEIEEGGVLQISGERSKEQEEKNEKWHRVERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKA+MENGVLTVTVPKMEVKKPE+K+I+ISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEVKKPEVKSIEISG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: XP_022957031.1 (uncharacterized protein LOC111458525 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 5.5e-82
Identity = 166/196 (84.69%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 63  RQTQQTKFQFYHSQLSVSAILLSNSP-TKMSLIPSIFGGRRSNVFDPFSLDVWDPFEGFP 122
           RQTQQT+FQFY SQ+S+SAILLSNSP T M+LIPSIFGGRRSNVFDPFSLDVWDPFEG P
Sbjct: 155 RQTQQTEFQFYQSQVSLSAILLSNSPTTTMALIPSIFGGRRSNVFDPFSLDVWDPFEGLP 214

Query: 123 FSSSLANVPSSARETSAFANTRIDWKETPEAHIFKADLPGIKKEEVKVEV--------EE 182
           FSSSLANVPSS    SAFANTRIDWKETPEAH+ KADLPGIKKEEVKVE+        EE
Sbjct: 215 FSSSLANVPSS----SAFANTRIDWKETPEAHVLKADLPGIKKEEVKVEIEEGGVLXXEE 274

Query: 183 GGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRLPENAKAGEVKASMENGVLTVTVP 242
           GGVLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRLPENAK  EVKA+MENGVLTVTVP
Sbjct: 275 GGVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRLPENAKVEEVKANMENGVLTVTVP 334

Query: 243 KMEVKKPEIKTIDISG 250
           KMEVKKPE+++IDISG
Sbjct: 335 KMEVKKPEVRSIDISG 346

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: XP_022978151.1 (17.8 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 312.4 bits (799), Expect = 3.6e-81
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG
Sbjct: 121 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: XP_023529964.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 2.3e-80
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAKAGEVKASMENGVLTVTVPKMEVKKPEIK+IDISG
Sbjct: 121 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: KAG6600956.1 (18.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309.3 bits (791), Expect = 3.0e-80
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK GEVKASMENGVLTVTVPKMEVKKPEIKTIDISG
Sbjct: 121 PENAKEGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: XP_022957034.1 (17.8 kDa class I heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 3.9e-80
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSA ETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSASETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG
Sbjct: 121 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 248.4 bits (633), Expect = 5.9e-66
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEG-FPFSSSLANVPSSARETSAFANTRIDWKET 150
           MSLIPSIFGGRRSNVFDPFS D+WDPFEG F  SS+LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 151 PEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFR 210
           PEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 211 LPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           LPENAK  EVKA+MENGVLTV VPK   KKP++K+IDISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-65
Identity = 122/159 (76.73%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRR+NVFDPFSLDV+DPFEGF   S LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  E+KASMENGVL+VTVPK+  KKPE+K+IDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh04G011460 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64
Identity = 116/159 (72.96%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSL+PS FGGRR+NVFDPFSLDVWDPFEGF  +  L N P  A++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHR+ERSSGKF+RRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKASMENGVL+VTVPK++  KPE+K++DISG
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmaCh04G011460 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.1e-55
Identity = 110/160 (68.75%), Postives = 129/160 (80.62%), Query Frame = 0


Query: 91  MSLIPSIF-GGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKET 150
           MS+IPS F   RRSN+FDPFSLDVWDPF+    SSSL      +RE SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT-SSSL------SRENSAIVNARVDWRET 60

Query: 151 PEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFR 210
           PEAH+FKADLPG+KKEEVKVE+EE  VL+ISGER  E+E+KND WHR+ERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 211 LPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           LPEN K  +VKA+MENGVLTVTVPK E KK ++K+I ISG
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmaCh04G011460 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 208.0 bits (528), Expect = 8.8e-54
Identity = 111/163 (68.10%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 91  MSLIPSIFG-GRRSN-VFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKE 150
           MSLIPS FG  RRSN +FDPFSLDVWDPF+   F SSL+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 151 TPEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRF 210
           T EAH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+EEK D WHR+ERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 211 RLPENAKAGEVKASMENGVLTVTVPKME--VKKPEIKTIDISG 250
           +LPEN K  +VKASMENGVLTVTVPK+E   KK ++K+IDISG
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of CmaCh04G011460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27396	4.4e-66	77.99	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P27880	4.4e-66	78.62	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19037	8.3e-65	78.75	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P13853	1.4e-64	76.73	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P05478	3.1e-64	73.91	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]

BLAST of CmaCh04G011460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY40	2.7e-82	84.69	uncharacterized protein LOC111458525 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]
A0A6J1ILY5	1.7e-81	100.00	17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1H0S8	1.9e-80	98.74	17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1ILW3	8.8e-78	94.34	17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1IKB6	5.7e-77	92.45	17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]

BLAST of CmaCh04G011460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957031.1	5.5e-82	84.69	uncharacterized protein LOC111458525 [Cucurbita moschata]	[more]
XP_022978151.1	3.6e-81	100.00	17.8 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_023529964.1	2.3e-80	98.74	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
KAG6600956.1	3.0e-80	98.74	18.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022957034.1	3.9e-80	98.74	17.8 kDa class I heat shock protein-like [Cucurbita moschata]	[more]

BLAST of CmaCh04G011460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	5.9e-66	78.75	heat shock protein 18.2	[more]
AT1G53540.1	1.0e-65	76.73	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	5.5e-64	72.96	heat shock protein 17.4	[more]
AT2G29500.1	2.1e-55	68.75	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	8.8e-54	68.10	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 99..249 e-value: 2.8E-51 score: 175.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 119..249
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 145..248 e-value: 2.4E-29 score: 101.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 135..249 score: 31.311853
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 91..249
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 143..234 e-value: 5.04689E-48 score: 152.074
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 91..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G011460.1	CmaCh04G011460.1	mRNA