CmaCh04G011060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G011060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	sister chromatid cohesion 1 protein 1
Location	Cma_Chr04: 5701716 .. 5707910 (+)
RNA-Seq Expression	CmaCh04G011060
Synteny	CmaCh04G011060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAGAAGCTAAGAGGAGTTGATCGACAATGTTTTACTCGCATCAGCTTCTGGCTCGCAAGGCTCCTCTCGGCCAAATTTGGTAAAACGACTTTCAATGCCTTTATGAATCTGAATAAGTTTATCAATGGCTGTTTGTTTGTGAAACTATCCATTTCGCTCTTTGTTTCTTGTTATTTAAGTTACTTTGGAGGAGATGTGGATGTTGTTGATGTATCCTGCTTTCACAGTCCGCTTCCTGAATTGATGATCAGATGAATTGTATTTTGTGTATTTTGATGTTTCTGTCATTTTGTGTATCTAATTTACTAAGGATGGCTGCAACAATGCACGCAAAGATCAATAGGAGAAAGCTCGATAAGCTGAACATAATCAAAATTTGGTAATGGAAAAACAAATGGAGGTAAGTTTCTTCAATTTGTTAGTGTTTGTTTAGTTTGATTTTTGTGCGGTATTTTGCAGTGAGGAGATTTTGAATCCTTCGGTTCCAATGGCTCTCAGACTCTCAGGGATTCTCATGGGTAATCGTCTTTCAATATCTTCGATTTTTTCAGAATTTTAACGCTCTGTTTTTCATCTTAGTAACAGAGTAGTGTCTCTCTGCTTCATTTTTCTCAGGCGGTGTTGTCATTGTCTATGAACGAAAAGTTAAAATTCTTTACGGTAATCTTATAATCACTTTTTATGAAGGAATATATTGATTTTAGGTTTAAATGCTATCTCTGAAGGACTGCGTACTTTTTTTCTTTTTTAATCACAGAGGATGTAACTCGGCTTCTGGTAATTACTCAAGTCTGAGTTCTATCAATAGAGTGACGTTTGCGTTTTCGTTCTCTTATTTTAATGAATATGTTGATTGGCTTCGTTCTCCGAAATGGATTTTCTCAGGTTGAGATAAACGAAGCGTGGAAGGTGAAAGCAGCTCCAGAGGCCACCGTCATTCCCAAAGGAAAATCTGTGGCCAAGTACGTCACTACTCTCCTTCTCCAAATAGAAATGCATAATCATCTAATTATTCATTTACTTCGAAAAAGAATGCGTGTGCACTAGAGAATATTAATAACTTGAATAATGGACCGGGTTACTTCCGGGTCCAAAATAAGAGGGATCCCGTGCGGAATAAGATGGTGATTTTGGCTCGGAATTTGTAATGTTTTGATTTTCACGTGTCCATAGTCCCAAAGTATGATGAGGTAGGGGCGGGTTATGGAGATGATTTCGACCCTGAATTTGTCTGTTTATGATTTTCGTGCGTCCACAGTCCAAAATAATCAAGTCGTTTTTGTAATTTTTCTTATTATGTGCTTCATACTCACTGCCCAAAATGTAAGATGAGATTGGGGAAGGCTAAGAATGTGATTTTGACTCTGAATTTATTTGGTGATGATTTTCATATGTTCACAGTTAAAAGTAAGACGATTTGTGAGTTAAGATGGTGATTTGGCTCTGGATTTGTTTGATTATATTATCATATGTCCACATATATGGCCGGTTAAGAAGGCGATATTGATTCTGAATTATATGGTTACGATTTATGTATGTCCACATGTACTCAGGAAGGAGGCTGCTACTCGGCCTAAAAAGGATCCGAAAGACGTGGGAGATCATGAGGCACAGTCCATTAACTTCTCCTACGACACCTCTCCAATGAAGTTCCAACAAACCGCATTTTTTACTATGGTAAGCCGTAGAAGAGAATGCCCTTTTCTTGGGTTCAACAGTTTATAGAAATTCAGTAGTTCCATCTAGATATACGTTCCATGCCATTCCCTAGCACGGTAAAAATGGACTTGGGAGAGTTGAATCCCAAAAGGTTATCGAAGATTGATCTATCAGATAGACGCGTATAGAACACTGGATACGGGTTTCGAAGGGAACTGATTTATTTTGGTAATATCATACTATTTTTATGTTCTTTGAAACAAATTATGGAAGTTTGGTAGCTTTTCTTTTGGGGGTTAACTTTTTGTTTTTCAATTACCAATTATTGATTGGTAGGTCTTTCTACGTTTGCAGCGGCTTGACAGTGTGGATGAACCATATATCCACGAGAAAACAGTGGAAGATGATGCGTCACATAACTTCCATCAAAGTCTTAATCTGTCCCTTGAACTCTCTCACTTAATTTCAGCATAACTATTTAATTCATGATGCGTTCTAACTACTAATGATCTTGGTTGTTCTCTTGCTCAGCTGATGCTGAAAATATAACCTTACTCGAGCGTTTTGATATGTATCAATCAAATACAAATACATTCAATCGGTTTGAAAGGTGAATTCTTAACTTGCATGGACAGAACTTTGCGTTATCTATCCAATTTCTTTTCCACCTTCTCTTTCTCAAAAAATTGAGCCGGCAAGGTTTTTGTGTTTATTGGAGCTCGAAAACACACGCTATTTCCAAATCGTGATGCTTCACTTGCACCGTAGTGATAATTCAAATCGCTATTTGAAATCCCTCTGAGCTGAAATGGTAAAAAAGGAAGCAACAACATCAATTTTTTGTGCTGGATTTGTAGATTTGATATTGAAGATGATGAGGATACACAGTCGAATTTTGCTTCTGTAGATCAAACAAAAATTCCAGATACTTTTGGACCTTCCCCTCCTCAAGACAAATATCAAGAAGGTAAGATACATTATCATGGTTTGGTACTTAATACGTCATCAACTGCATCATATATGTAATACCATATTCATAATTCATAAATTATAAGAAAATGCAGTTTTTAAGTTCAATCTTCTCGTCCCCATCATTTAGTGGTCTCTATTTTTGAGTTGGTGCATTCAAAAGTATTTATTGAGTTTGGGAGGAGTGAAATAAATATGACCATGTGAACGCTTCATCTACTTGTTTTTTCTTTTCACTACATCCTAGAAATGAGAAGCTGTTCCAAACTCATGCTTGAGGGAAAGAAAATTATAAATAACCTCCACTCTTCTCTTTTTTCCATGAAGAGAAGATCAGACTGGTCGATGGAAACTTGGTGCTTAGTAGCCTCTTGCTAAAACAGACTACTCCATTGATTTTTATTTTTTTTTCAGAAGGGAGAGGAAGATTACCAAAGGATATCTCTTGTGGTGTGAGACCTTTTTGGGAAATTAAAAACAAAACCTTAAGAATATCAAAGTCATGCTCTTAACTTATCTATATCAATAGGATCCTCAAGTGTCGAATATAAAAGTTAATCTTGAAATTGTACCCAAAGCAACTATGTGCCAAATAAAGAATGTATTAATCTTGAAATTGTACCCAAAGCAACTATGTGCCAAATAAAGAATGTACAAATTCTTGATTAAGAAAAAGCTGTTTGAAGGCTCCAGAGAAGAAGGTCTCAGGAAAGATTATTGGAGTCTCAAACTATGTCCATTGATATTGAGGTCTTTTGAGAAACCAAAAGCAAAATCATGAGAACTTGTACAATTGGATAATGTCATACCACTACGAGGCTCATTGTTCCTAACATTGTTCCTAACATCTCACAACTCGATTTAACTTGCTACTGCATTCCAAAATAACTTTCATCTCTGAATGTCAACTTTAGAAGAAATTTCATGCTTTTATGCATTTTCTTACCTCTAGGGTCTCCTGAGGCTGAAGTCCAGGACCAACATCTTGAACGCGATGTCATTCAGCAAGCCTACGAATCCAAGGAGCTCAGACAGGTATTCTTCGAGTATGATCAATAAAGAATAGATTAATTACACAATTCAGGCTTAACTAGACAATGAAGTGTATCCATTTAACACCAGGTGGAGCAGGTGGCAATAAAAAGGAAAACAAAAAGAACAGCAGCCTTTCTGATGGACTATGAAAAAACCATCATTCCTGGACACATATACCAATCTTGGCTGAAAGATGTTTCGGATCTAATCTCTAGAAGGGGAAAAAAGAGAAAGGTTCTTAGTCTCCAACATGCAGTTCTCAATTTACCTAATTTTCTATGTTACTTGATTTAGATAATGAGTACACTCCTGAACACTAATAATTTATTATCAAGAAAATTTTGCGCGCAAGTAAAAGTGCGCGTGAATATTGATTACAAGGTATATCTTAGGTACTTATTTTGATCGACAGAGTGATGTCTGTGATAAGATTGATTCTCCACAAAATAACAAAAACTACAAACAAGTTAGTAATTAAGAAAGCTTCATATTCCTTTGTAACAGCGGACAGGTGCAATGTCCTCTATGAAGATAGCCACTCTCATGGATCTTCCTCCTGTGGTGTTAAGTGGTCGCTTATTCACAGATGGAAGTAGAGAAGTCTATTATCCAGCTCCTCTGCTAGAGTTATGGATGAAAAGTATCCGAAACCCCCCTGACTCACCTTCTGGTTAATATTATCCGTAACTCGACATTTCCATTAAAAGTATAGATTTGGGGAAAAGGAAATTTGATCATTTATTTTCTGCAGTGAGGAACTCTGCACCCTTACCTCCTGAACCATCACTGTCTTCACTGCCAGAGAGAGTAAACTTTCCAGATCACATGGATTTTGTAAGCCGTTAACGAACTTCAACAGATTTATTTCAAGTGTTGGACGAATACAATCTTCTCTCTTACAAATTCTTGATGCGAATTATGAAGGCTTATGAAAATCAATACAGTGGAGTTGGTTCTCAGTCATTTGGAGCTTCCATAGAGAAGCTAAGGACCAAACCAGTCAACGATGATATTCACGCCGAGATCCTTCTGGAAGAACTCAGACCGGACTTCATGAACAATGTTATGGGGATGGCTGAAAGAAATCAAGTGGTTACACCTGGAAATTCCGGTCCGTTTTCCTCATCTAAGCTAAAACAGTTGACACTTCATTCCATCTCCATGGTAAGGACTCTGAGATGACTATAACTTGTTCAAATAATTGTTGTCCATCTGAATAAATAGGAATTGGAGTGAGGTCAGTTTCCAGCTCAGCATCTGAACATGGTGTGTTTGTATATAATCCAGAGACCAATTCTGTACGGTTAGTAGTATAAATGCTTACAGATATTCCCTTTTGAACCCAAGACAATAATTTATTTTGTGTTTAGGACAATAACACTATGACTGACGTATTAACGATCAATAGATCCAACAAGAAAAGGCCTTATTATTCATCAAGACAAAGTAGCGGAGGCCTCGAACCTGTAGCTGAGGAGAATCCATGGCATCACTCTGATCCAAACTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGGTAAGTAAAACGCTAATCTATCTATAGCCTGCACAATCACCGTGGGCTAATTTCTCTATCTAGTTGAAATCTACACTAGAATTTATAAGTTGCTTTCACAGATTTATTGGTAGAAACTGCACCGACACAAACTCAAGTTACCCAGCCCGCCATCAAGAATCCTCCTGCTGACAAGATAACTAATTCCATTCGCATGTAAATCCTCTTTTTATTTTTTTCTTTTTTTTTGCTCTGAAGCGTGTGTTTTAGTTGTTTCATCATTGATTGCTAAATGATAACAAAATCCTTCTTTCCTTCTTGCCCATTTGAATGCTAAGGCAAATGAAGGCACATTTTAATACGCCAGGAGCCCCGCCAGCAGAATCTTTAAACAACTTGGCCGCTGGAATGAACCCCAAAGCAGCTGCTATGCTCTTCTACCAGACTTGCGGTATCTTTTCATTCACAAAATTCCTCCAATTTTGCTTTGTGCTGCTCTTGTTATTTGTATAAGGTCCCAAGTCTTTTTTCTCGTTGGGTTAAATCATCAATTTGGTCTCACGAATTACGTTAAATCTCTTAAAATGTCTCTATGGTTGCCAAATTTTAACAAATTTCTGAACAGTTTTTGTAAGTTCAATATATGATTAGAAAAAATAATTTTTTAAGAGCATGAACTTAAAAAAAATGATAATTTAATACTATTTACCTGGTATAACAATAAGAAATTAATCTAAAATGACTTTATCCTTTCTTATACAGTTCTAGCTTCAAGTGATTACTTAAAAGTCAATCAACAAGTTCCTTTTGGAGACATTTTCATCTCAAAAGGAACAAAAATGTGACACAACTGAGGTCAGTATCTTAAACTTACTCGAACCACTATCACACACACGTTCTGCCAATATAATTTTTACTAGAATAACATCTTGTTTTCCATTTATCCTTTCCTAGCTAGTGCAATGAAATCTACTGCCATTGCTTTAATTTCTTTCTCACTGCCAAATCTAG

mRNA sequence

CAACAGAAGCTAAGAGGAGTTGATCGACAATGTTTTACTCGCATCAGCTTCTGGCTCGCAAGGCTCCTCTCGGCCAAATTTGGATGGCTGCAACAATGCACGCAAAGATCAATAGGAGAAAGCTCGATAAGCTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCAATGGCTCTCAGACTCTCAGGGATTCTCATGGGCGGTGTTGTCATTGTCTATGAACGAAAAGTTAAAATTCTTTACGAGGATGTAACTCGGCTTCTGGTTGAGATAAACGAAGCGTGGAAGGTGAAAGCAGCTCCAGAGGCCACCGTCATTCCCAAAGGAAAATCTGTGGCCAAGAAGGAGGCTGCTACTCGGCCTAAAAAGGATCCGAAAGACGTGGGAGATCATGAGGCACAGTCCATTAACTTCTCCTACGACACCTCTCCAATGAAGTTCCAACAAACCGCATTTTTTACTATGCGGCTTGACAGTGTGGATGAACCATATATCCACGAGAAAACAGTGGAAGATGATGCGTCACATAACTTCCATCAAACTGATGCTGAAAATATAACCTTACTCGAGCGTTTTGATATGTATCAATCAAATACAAATACATTCAATCGGTTTGAAAGATTTGATATTGAAGATGATGAGGATACACAGTCGAATTTTGCTTCTGTAGATCAAACAAAAATTCCAGATACTTTTGGACCTTCCCCTCCTCAAGACAAATATCAAGAAGGGTCTCCTGAGGCTGAAGTCCAGGACCAACATCTTGAACGCGATGTCATTCAGCAAGCCTACGAATCCAAGGAGCTCAGACAGGTGGAGCAGGTGGCAATAAAAAGGAAAACAAAAAGAACAGCAGCCTTTCTGATGGACTATGAAAAAACCATCATTCCTGGACACATATACCAATCTTGGCTGAAAGATGTTTCGGATCTAATCTCTAGAAGGGGAAAAAAGAGAAAGCGGACAGGTGCAATGTCCTCTATGAAGATAGCCACTCTCATGGATCTTCCTCCTGTGGTGTTAAGTGGTCGCTTATTCACAGATGGAAGTAGAGAAGTCTATTATCCAGCTCCTCTGCTAGAGTTATGGATGAAAAGTATCCGAAACCCCCCTGACTCACCTTCTGTGAGGAACTCTGCACCCTTACCTCCTGAACCATCACTGTCTTCACTGCCAGAGAGAGTAAACTTTCCAGATCACATGGATTTTGCTTATGAAAATCAATACAGTGGAGTTGGTTCTCAGTCATTTGGAGCTTCCATAGAGAAGCTAAGGACCAAACCAGTCAACGATGATATTCACGCCGAGATCCTTCTGGAAGAACTCAGACCGGACTTCATGAACAATGTTATGGGGATGGCTGAAAGAAATCAAGTGGTTACACCTGGAAATTCCGGAATTGGAGTGAGGTCAGTTTCCAGCTCAGCATCTGAACATGGTGTGTTTGTATATAATCCAGAGACCAATTCTGTACGATCCAACAAGAAAAGGCCTTATTATTCATCAAGACAAAGTAGCGGAGGCCTCGAACCTGTAGCTGAGGAGAATCCATGGCATCACTCTGATCCAAACTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGATTTATTGGTAGAAACTGCACCGACACAAACTCAAGTTACCCAGCCCGCCATCAAGAATCCTCCTGCTGACAAGATAACTAATTCCATTCGCATGCAAATGAAGGCACATTTTAATACGCCAGGAGCCCCGCCAGCAGAATCTTTAAACAACTTGGCCGCTGGAATGAACCCCAAAGCAGCTGCTATGCTCTTCTACCAGACTTGCGTTCTAGCTTCAAGTGATTACTTAAAAGTCAATCAACAAGTTCCTTTTGGAGACATTTTCATCTCAAAAGGAACAAAAATGTGACACAACTGAGGTCAGTATCTTAAACTTACTCGAACCACTATCACACACACGTTCTGCCAATATAATTTTTACTAGAATAACATCTTGTTTTCCATTTATCCTTTCCTAGCTAGTGCAATGAAATCTACTGCCATTGCTTTAATTTCTTTCTCACTGCCAAATCTAG

Coding sequence (CDS)

ATGTTTTACTCGCATCAGCTTCTGGCTCGCAAGGCTCCTCTCGGCCAAATTTGGATGGCTGCAACAATGCACGCAAAGATCAATAGGAGAAAGCTCGATAAGCTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCAATGGCTCTCAGACTCTCAGGGATTCTCATGGGCGGTGTTGTCATTGTCTATGAACGAAAAGTTAAAATTCTTTACGAGGATGTAACTCGGCTTCTGGTTGAGATAAACGAAGCGTGGAAGGTGAAAGCAGCTCCAGAGGCCACCGTCATTCCCAAAGGAAAATCTGTGGCCAAGAAGGAGGCTGCTACTCGGCCTAAAAAGGATCCGAAAGACGTGGGAGATCATGAGGCACAGTCCATTAACTTCTCCTACGACACCTCTCCAATGAAGTTCCAACAAACCGCATTTTTTACTATGCGGCTTGACAGTGTGGATGAACCATATATCCACGAGAAAACAGTGGAAGATGATGCGTCACATAACTTCCATCAAACTGATGCTGAAAATATAACCTTACTCGAGCGTTTTGATATGTATCAATCAAATACAAATACATTCAATCGGTTTGAAAGATTTGATATTGAAGATGATGAGGATACACAGTCGAATTTTGCTTCTGTAGATCAAACAAAAATTCCAGATACTTTTGGACCTTCCCCTCCTCAAGACAAATATCAAGAAGGGTCTCCTGAGGCTGAAGTCCAGGACCAACATCTTGAACGCGATGTCATTCAGCAAGCCTACGAATCCAAGGAGCTCAGACAGGTGGAGCAGGTGGCAATAAAAAGGAAAACAAAAAGAACAGCAGCCTTTCTGATGGACTATGAAAAAACCATCATTCCTGGACACATATACCAATCTTGGCTGAAAGATGTTTCGGATCTAATCTCTAGAAGGGGAAAAAAGAGAAAGCGGACAGGTGCAATGTCCTCTATGAAGATAGCCACTCTCATGGATCTTCCTCCTGTGGTGTTAAGTGGTCGCTTATTCACAGATGGAAGTAGAGAAGTCTATTATCCAGCTCCTCTGCTAGAGTTATGGATGAAAAGTATCCGAAACCCCCCTGACTCACCTTCTGTGAGGAACTCTGCACCCTTACCTCCTGAACCATCACTGTCTTCACTGCCAGAGAGAGTAAACTTTCCAGATCACATGGATTTTGCTTATGAAAATCAATACAGTGGAGTTGGTTCTCAGTCATTTGGAGCTTCCATAGAGAAGCTAAGGACCAAACCAGTCAACGATGATATTCACGCCGAGATCCTTCTGGAAGAACTCAGACCGGACTTCATGAACAATGTTATGGGGATGGCTGAAAGAAATCAAGTGGTTACACCTGGAAATTCCGGAATTGGAGTGAGGTCAGTTTCCAGCTCAGCATCTGAACATGGTGTGTTTGTATATAATCCAGAGACCAATTCTGTACGATCCAACAAGAAAAGGCCTTATTATTCATCAAGACAAAGTAGCGGAGGCCTCGAACCTGTAGCTGAGGAGAATCCATGGCATCACTCTGATCCAAACTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGATTTATTGGTAGAAACTGCACCGACACAAACTCAAGTTACCCAGCCCGCCATCAAGAATCCTCCTGCTGACAAGATAACTAATTCCATTCGCATGCAAATGAAGGCACATTTTAATACGCCAGGAGCCCCGCCAGCAGAATCTTTAAACAACTTGGCCGCTGGAATGAACCCCAAAGCAGCTGCTATGCTCTTCTACCAGACTTGCGTTCTAGCTTCAAGTGATTACTTAAAAGTCAATCAACAAGTTCCTTTTGGAGACATTTTCATCTCAAAAGGAACAAAAATGTGA

Protein sequence

MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSPEAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKSIRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNPETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM

Homology

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BLAST of CmaCh04G011060 vs. ExPASy Swiss-Prot
Match: Q9S7T7 (Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE=2 SV=2)

HSP 1 Score: 430.6 bits (1106), Expect = 3.0e-119
Identity = 284/637 (44.58%), Postives = 380/637 (59.65%), Query Frame = 0


Query: 7   LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIV 66
           LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIV
Sbjct: 17  LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76

Query: 67  YERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHE 126
           YERKVK+L++DV R LVEIN AW+ K+ P+ T++PKGK+ A+KEA T P+ +  D GD E
Sbjct: 77  YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136

Query: 127 AQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERF 186
            Q+ N     + M FQQT F +MRL   DE +++     +D    FHQ DAENITL E  
Sbjct: 137 -QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYH 196

Query: 187 DMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQ-----DKYQEGSPE 246
             +Q+N  T++RFERFDIE D++TQ N    +  +IP T  PSPP+     +     SP+
Sbjct: 197 GSFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQ 256

Query: 247 AEVQDQHLERDVIQQAYESKELRQVEQ----VAIKRKTKRTAAFLMDYEKTIIPGHIYQS 306
            + Q ++  RD   +  E + +   E+       K++ ++TA   MDYE+TII GH+YQS
Sbjct: 257 RQEQQEN-RRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAGHVYQS 316

Query: 307 WLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELW 366
           WL+D SD++ R  K++ R      M+     ++PP     +LF    ++  YP  L +LW
Sbjct: 317 WLQDTSDILCRGEKRKVRGTIRPDMESFKRANMPPT----QLF---EKDSSYPPQLYQLW 376

Query: 367 MKSIRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEK 426
            K+ +    S S      L  E S   + ER++     D    ++ S   SQ+  +  E 
Sbjct: 377 SKNTQVLQTSSSESRHPDLRAEQSPGFVQERMHNHHQTD---HHERSDTSSQNLDSPAEI 436

Query: 427 LRTKPVNDDIHAEILLEELR--PDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGV 486
           LRT         E ++   R  P+ +N     A+ N  VTP  SG  VRS+ S+ S  G 
Sbjct: 437 LRTVRTGKGASVESMMAGSRASPETINR--QAADIN--VTPFYSGDDVRSMPSTPSARGA 496

Query: 487 FVYNPETNSVRS---NKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSEN----D 546
              N    S +S   N+KRP  S R+   GLEPVAEE PW H +  F+ + L E     D
Sbjct: 497 ASINNIEISSKSRMPNRKRPNSSPRR---GLEPVAEERPWEHREYEFEFSMLPEKRFTAD 556

Query: 547 PDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPK 606
            ++L ETA TQ   TQ  + N   + IT+SI+  +K HF TPGAP  ESLN LA GM+  
Sbjct: 557 KEILFETASTQ---TQKPVCNQSDEMITDSIKSHLKTHFETPGAPQVESLNKLAVGMDRN 616

Query: 607 AAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 626
           AAA LF+Q+CVLA+   +KVNQ  P+GDI I++G  M
Sbjct: 617 AAAKLFFQSCVLATRGVIKVNQAEPYGDILIARGPNM 627

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BLAST of CmaCh04G011060 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 3.1e-12
Identity = 75/247 (30.36%), Postives = 115/247 (46.56%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATV-IPKGKSVAKKEAATRPKKDP 120
            GVV +Y +KV  LY D   L       W  KA     V +P+    A  E+ T P+   
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLL-----NTWVAKAFVSTQVNLPEDARQAPPESVTLPQALN 120

Query: 121 KDVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAEN 180
            D  D E  +++  +D +  + ++    T ++ +  +PY+     ED  S        E+
Sbjct: 121 LDEFDLEDDTLDMEFD-NHTRSEEDITLTDQIPTGIDPYVAVTFDEDIIS--------ES 180

Query: 181 ITLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGS 240
           I +    D+ QS           D+E   +T  +    D     DT G   P++  +E +
Sbjct: 181 IPM----DVDQSTEPVSRHTGEIDVETAHETGPDNEPRDSNIAFDT-GTYSPRNVTEEFT 225

Query: 241 PEAEVQD 247
              EVQD
Sbjct: 241 ---EVQD 225

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BLAST of CmaCh04G011060 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.0e-11
Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKK--- 120
            GVV +Y RKV  L++D +  L+++ +A++  A      +P  +S A   + T P+    
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVD----LPPEESTAPYHSITLPETFDL 120

Query: 121 DPKDVGDHEAQSINF 133
           D  ++ D+E    N+
Sbjct: 121 DDFELPDNEIFQGNY 131

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BLAST of CmaCh04G011060 vs. ExPASy Swiss-Prot
Match: Q6TEL1 (Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad21a PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-10
Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKK 118
            GVV +Y RK K L  D     ++I  A++    P    +P+    A   A T P++
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFR----PGVVDLPEDNREAAYNAITLPEE 113

[Close]

BLAST of CmaCh04G011060 vs. ExPASy Swiss-Prot
Match: Q3SWX9 (Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-10
Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKK 118
            GVV +Y RK K L  D     ++I  A++    P    +P+    A   A T P++
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFR----PGVVDLPEENREAAYNAITLPEE 113

[Close]

BLAST of CmaCh04G011060 vs. ExPASy TrEMBL
Match: A0A6J1JET8 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483772 PE=3 SV=1)

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 625/625 (100.00%), Postives = 625/625 (100.00%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240
           TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP
Sbjct: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240

Query: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300
           EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK
Sbjct: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300

Query: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360
           DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS
Sbjct: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360

Query: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420
           IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT
Sbjct: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420

Query: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480
           KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP
Sbjct: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480

Query: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540
           ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT
Sbjct: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540

Query: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600
           QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL
Sbjct: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600

Query: 601 ASSDYLKVNQQVPFGDIFISKGTKM 626
           ASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 ASSDYLKVNQQVPFGDIFISKGTKM 625

[Close]

BLAST of CmaCh04G011060 vs. ExPASy TrEMBL
Match: A0A6J1GXZ1 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458512 PE=3 SV=1)

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 605/625 (96.80%), Postives = 612/625 (97.92%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPE TVIPKGKSVAKKEA TRPKKDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           DVGDHEAQSINFSY+TSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240
           TLLERFDMYQSNTN FNRFERFDIEDDEDTQ NFASVDQTKIPDTFG SPPQDKYQEG P
Sbjct: 181 TLLERFDMYQSNTNAFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGTSPPQDKYQEGPP 240

Query: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300
           +AEVQDQHLERDVIQQAY SKE RQ EQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK
Sbjct: 241 DAEVQDQHLERDVIQQAYVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300

Query: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360
           DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVL GRLFTDGSREVYYPAPLLELWMKS
Sbjct: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLCGRLFTDGSREVYYPAPLLELWMKS 360

Query: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420
           IR+PPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYEN+YSGVGSQSFGASIEKLRT
Sbjct: 361 IRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENRYSGVGSQSFGASIEKLRT 420

Query: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480
           KPVNDDIHAEILLEELRPDF NN+MGMAERNQVVTPGNSGIGVRSVSSSASEHGVFV NP
Sbjct: 421 KPVNDDIHAEILLEELRPDFRNNLMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVSNP 480

Query: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540
           ETNSVRSNKKRPY SSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT
Sbjct: 481 ETNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540

Query: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600
           QVTQPAIK+PPADKITNSIRMQMKAHF+TPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL
Sbjct: 541 QVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600

Query: 601 ASSDYLKVNQQVPFGDIFISKGTKM 626
           ASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 ASSDYLKVNQQVPFGDIFISKGTKM 625

[Close]

BLAST of CmaCh04G011060 vs. ExPASy TrEMBL
Match: A0A6J1JEF3 (sister chromatid cohesion 1 protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483772 PE=4 SV=1)

HSP 1 Score: 1069.3 bits (2764), Expect = 6.0e-309
Identity = 543/543 (100.00%), Postives = 543/543 (100.00%), Query Frame = 0


Query: 83  VEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHEAQSINFSYDTSPMKFQ 142
           VEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHEAQSINFSYDTSPMKFQ
Sbjct: 10  VEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHEAQSINFSYDTSPMKFQ 69

Query: 143 QTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERFDMYQSNTNTFNRFERF 202
           QTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERFDMYQSNTNTFNRFERF
Sbjct: 70  QTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERFDMYQSNTNTFNRFERF 129

Query: 203 DIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSPEAEVQDQHLERDVIQQAYESKE 262
           DIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSPEAEVQDQHLERDVIQQAYESKE
Sbjct: 130 DIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSPEAEVQDQHLERDVIQQAYESKE 189

Query: 263 LRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLKDVSDLISRRGKKRKRTGAMSSM 322
           LRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLKDVSDLISRRGKKRKRTGAMSSM
Sbjct: 190 LRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLKDVSDLISRRGKKRKRTGAMSSM 249

Query: 323 KIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKSIRNPPDSPSVRNSAPLPPEPSL 382
           KIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKSIRNPPDSPSVRNSAPLPPEPSL
Sbjct: 250 KIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKSIRNPPDSPSVRNSAPLPPEPSL 309

Query: 383 SSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRTKPVNDDIHAEILLEELRPDFMN 442
           SSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRTKPVNDDIHAEILLEELRPDFMN
Sbjct: 310 SSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRTKPVNDDIHAEILLEELRPDFMN 369

Query: 443 NVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNPETNSVRSNKKRPYYSSRQSSGG 502
           NVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNPETNSVRSNKKRPYYSSRQSSGG
Sbjct: 370 NVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNPETNSVRSNKKRPYYSSRQSSGG 429

Query: 503 LEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQ 562
           LEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQ
Sbjct: 430 LEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQ 489

Query: 563 MKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKG 622
           MKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKG
Sbjct: 490 MKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKG 549

Query: 623 TKM 626
           TKM
Sbjct: 550 TKM 552

[Close]

BLAST of CmaCh04G011060 vs. ExPASy TrEMBL
Match: A0A6J1FMB0 (sister chromatid cohesion 1 protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447108 PE=3 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.1e-299
Identity = 534/625 (85.44%), Postives = 573/625 (91.68%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVK   E TVIPKGKS+AKK+A TRPKKDP+
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           D+GDHE+QSINFS  TSPM+FQQTAFFT+RLDSVDEPYI+++T+EDD S NFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDRTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240
           TLLER D YQSNTNTFNRFERFDIE+DE+TQ NFASVDQT+IP     SPP D Y EG P
Sbjct: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300
           +AEVQDQHLER+V+QQAYE KELRQV++VAIKRKTKRTAA  MDYE+T++PG+IYQSWL+
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360
           DVSDL+SRRG+KRKRTGA SSMK+A LMDLPPVVLSGRLF+DG REVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420
           IRNP DSPSVRNSA LPPEPSLSS PERVNFPDHMDF +E+ +SGVGSQSFGASIEKLRT
Sbjct: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDHMDFPFEDHHSGVGSQSFGASIEKLRT 420

Query: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480
           KPVN+DI AEILL ELRP+FM+NVM +AERNQVVTPGNSGIG+R VSSSASEHGVF YN 
Sbjct: 421 KPVNEDIQAEILLGELRPNFMDNVMRLAERNQVVTPGNSGIGMRPVSSSASEHGVFSYNS 480

Query: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540
           ETNS RSNKKRPY SSR SSGGLEPV EEN WHHSDPNFKLARLSEND DLLVETA TQT
Sbjct: 481 ETNSARSNKKRPYSSSRHSSGGLEPVDEENQWHHSDPNFKLARLSENDTDLLVETARTQT 540

Query: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600
           QVTQPAIK+ PADKIT+SIRMQMKAHF TPGA P ESLNNL AGMN KAAAMLFY TCVL
Sbjct: 541 QVTQPAIKHSPADKITDSIRMQMKAHFVTPGAAPTESLNNLTAGMNCKAAAMLFYHTCVL 600

Query: 601 ASSDYLKVNQQVPFGDIFISKGTKM 626
           ASSDYLKV+QQVPFGDIFISKGTKM
Sbjct: 601 ASSDYLKVDQQVPFGDIFISKGTKM 625

[Close]

BLAST of CmaCh04G011060 vs. ExPASy TrEMBL
Match: A0A6J1KBX6 (sister chromatid cohesion 1 protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111491896 PE=3 SV=1)

HSP 1 Score: 1032.3 bits (2668), Expect = 8.2e-298
Identity = 529/625 (84.64%), Postives = 573/625 (91.68%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNII+ICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIEICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVK   E TVIPKGKS+AKK+A TRPKKDP+
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           D+GDHE+QSINFS  TSPM+FQQTAFFT+RLDSVDEPYI+++T+EDD S NFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDRTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240
           TLLE  D YQSNTNTFNRFERFDIE+DE+TQ NFASVD T+IP     SPP D Y EG P
Sbjct: 181 TLLEPLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDHTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300
           +AEVQDQHLER+V+QQAYE KELRQV++VAIKRKTKRTAA  MDYE+T++PG+IYQSWL+
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360
           DVSDL+SRRG+KRKRTGA SSMK+A LMDLPPVVLSGRLF+DG REVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420
           IRNP DSPSVRNSA LPPEPSLSS PERVNFPDHMDF +E+ +SGVGSQSFGASIEKLRT
Sbjct: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDHMDFPFEDHHSGVGSQSFGASIEKLRT 420

Query: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480
           KPVN+DI AEILL ELRP+FM+NVM +AERNQVVTPGNSGIG+R VSSSASEHGVF YN 
Sbjct: 421 KPVNEDIQAEILLGELRPNFMDNVMRLAERNQVVTPGNSGIGMRPVSSSASEHGVFSYNS 480

Query: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540
           ETNSVRSNKKRPY SSRQ SGGL+PV EEN WHHSDPNFKLARLSEND DLLVETA TQT
Sbjct: 481 ETNSVRSNKKRPYSSSRQCSGGLQPVDEENQWHHSDPNFKLARLSENDTDLLVETARTQT 540

Query: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600
           QVTQPAIK+ PADKIT+SIRMQMKAHF+TPGA P ESLNNL AGMN KAAAMLFY TCVL
Sbjct: 541 QVTQPAIKHSPADKITDSIRMQMKAHFDTPGAAPTESLNNLTAGMNCKAAAMLFYHTCVL 600

Query: 601 ASSDYLKVNQQVPFGDIFISKGTKM 626
           ASSDYLKV+Q++PFGDIFISKGTKM
Sbjct: 601 ASSDYLKVDQKIPFGDIFISKGTKM 625

[Close]

BLAST of CmaCh04G011060 vs. NCBI nr
Match: XP_022985848.1 (sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 625/625 (100.00%), Postives = 625/625 (100.00%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240
           TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP
Sbjct: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240

Query: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300
           EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK
Sbjct: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300

Query: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360
           DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS
Sbjct: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360

Query: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420
           IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT
Sbjct: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420

Query: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480
           KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP
Sbjct: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480

Query: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540
           ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT
Sbjct: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540

Query: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600
           QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL
Sbjct: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600

Query: 601 ASSDYLKVNQQVPFGDIFISKGTKM 626
           ASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 ASSDYLKVNQQVPFGDIFISKGTKM 625

[Close]

BLAST of CmaCh04G011060 vs. NCBI nr
Match: XP_023552287.1 (sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1196.0 bits (3093), Expect = 0.0e+00
Identity = 610/625 (97.60%), Postives = 617/625 (98.72%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPE TVIPKGKSVAKKEA TRPKKDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           DVGDHEAQSINFSY+TSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240
           TLLERFDMYQSNTNTFNRFERFDIEDDEDTQ NFASVDQTKIPDTFGPSPPQDK+QEG P
Sbjct: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGPSPPQDKHQEGPP 240

Query: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300
           +AEVQDQHLERDVIQQAYESKELRQ EQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK
Sbjct: 241 DAEVQDQHLERDVIQQAYESKELRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300

Query: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360
           DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS
Sbjct: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360

Query: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420
           IR+PPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYEN YSGVGSQSFGASIEKLRT
Sbjct: 361 IRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENHYSGVGSQSFGASIEKLRT 420

Query: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480
           KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFV NP
Sbjct: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVSNP 480

Query: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540
           ETNSVRSNKKRPY SSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT
Sbjct: 481 ETNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540

Query: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600
           QVTQPAIK+PPADKITNSIRMQMKAHF+TPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL
Sbjct: 541 QVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600

Query: 601 ASSDYLKVNQQVPFGDIFISKGTKM 626
           ASSDYLKVNQQ+PFGDIFISKGTKM
Sbjct: 601 ASSDYLKVNQQIPFGDIFISKGTKM 625

[Close]

BLAST of CmaCh04G011060 vs. NCBI nr
Match: XP_022957007.1 (sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 605/625 (96.80%), Postives = 612/625 (97.92%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPE TVIPKGKSVAKKEA TRPKKDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           DVGDHEAQSINFSY+TSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240
           TLLERFDMYQSNTN FNRFERFDIEDDEDTQ NFASVDQTKIPDTFG SPPQDKYQEG P
Sbjct: 181 TLLERFDMYQSNTNAFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGTSPPQDKYQEGPP 240

Query: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300
           +AEVQDQHLERDVIQQAY SKE RQ EQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK
Sbjct: 241 DAEVQDQHLERDVIQQAYVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300

Query: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360
           DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVL GRLFTDGSREVYYPAPLLELWMKS
Sbjct: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLCGRLFTDGSREVYYPAPLLELWMKS 360

Query: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKLRT 420
           IR+PPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYEN+YSGVGSQSFGASIEKLRT
Sbjct: 361 IRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENRYSGVGSQSFGASIEKLRT 420

Query: 421 KPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVYNP 480
           KPVNDDIHAEILLEELRPDF NN+MGMAERNQVVTPGNSGIGVRSVSSSASEHGVFV NP
Sbjct: 421 KPVNDDIHAEILLEELRPDFRNNLMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVSNP 480

Query: 481 ETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540
           ETNSVRSNKKRPY SSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT
Sbjct: 481 ETNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLVETAPTQT 540

Query: 541 QVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600
           QVTQPAIK+PPADKITNSIRMQMKAHF+TPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL
Sbjct: 541 QVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAAGMNPKAAAMLFYQTCVL 600

Query: 601 ASSDYLKVNQQVPFGDIFISKGTKM 626
           ASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 ASSDYLKVNQQVPFGDIFISKGTKM 625

[Close]

BLAST of CmaCh04G011060 vs. NCBI nr
Match: KAG7031552.1 (Sister chromatid cohesion 1 protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 605/642 (94.24%), Postives = 610/642 (95.02%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPE TVIPKGKSVAKKEA TRPKKDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTM------RLDSVDEPYIHEKTVEDDASHNFHQ 180
           DVGDHEAQSINFSY+TSPMKFQQTAFFTM      RLDSVDEPYIHEKTVEDDASHNFHQ
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMVFLRLQRLDSVDEPYIHEKTVEDDASHNFHQ 180

Query: 181 TDAENITLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDK 240
           TDAENITLLERFDMYQSNTN FNRFERFDIEDDEDTQ NFASVDQTKIPDTFGPSPPQ K
Sbjct: 181 TDAENITLLERFDMYQSNTNAFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGPSPPQGK 240

Query: 241 YQEGSPEAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHI 300
           YQEG P+AEV DQHLERDVIQQAY SKE RQ EQVAIKRKTKRTAAFLMDYEKTIIPGHI
Sbjct: 241 YQEGPPDAEVGDQHLERDVIQQAYVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHI 300

Query: 301 YQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLL 360
           YQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVL GRLFTDGSREVYYPAPLL
Sbjct: 301 YQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLCGRLFTDGSREVYYPAPLL 360

Query: 361 ELWMKSIRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGAS 420
           ELWMKSIR+PPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYEN YSGVGSQSFGAS
Sbjct: 361 ELWMKSIRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENHYSGVGSQSFGAS 420

Query: 421 IEKLRTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHG 480
           IEKLRTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHG
Sbjct: 421 IEKLRTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHG 480

Query: 481 VFVYNPETNS-----------VRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLAR 540
           VFV NPETNS            RSNKKRPY SSRQSSGGLEPVAEENPWHHSDPNFKLAR
Sbjct: 481 VFVSNPETNSDNNTTTEVLTINRSNKKRPYSSSRQSSGGLEPVAEENPWHHSDPNFKLAR 540

Query: 541 LSENDPDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAA 600
           LSENDPDLLVETAPTQTQVTQPAIK+PPADKITNSIRMQMKAHF+TPGAPPAESLNNLAA
Sbjct: 541 LSENDPDLLVETAPTQTQVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAA 600

Query: 601 GMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 626
           GMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 GMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 642

[Close]

BLAST of CmaCh04G011060 vs. NCBI nr
Match: KAG6600915.1 (putative methyltransferase PMT23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 586/632 (92.72%), Postives = 591/632 (93.51%), Query Frame = 0


Query: 19   MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78
            MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 678  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 737

Query: 79   TRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHEAQSINFSYDTSP 138
            TRLLVEINEAWKVKAAPE TVIPKGKSVAKKEA TRPKKDPKDVGDHEAQSINFSY+TSP
Sbjct: 738  TRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPKDVGDHEAQSINFSYNTSP 797

Query: 139  MKFQQTAFFTM-------------------------RLDSVDEPYIHEKTVEDDASHNFH 198
            MK QQTAFFTM                         RLDSVDEPYIHEKTVEDDASHNFH
Sbjct: 798  MKLQQTAFFTMIDAYRITLDTGFEGNWFILVFLRLQRLDSVDEPYIHEKTVEDDASHNFH 857

Query: 199  QTDAENITLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQD 258
            QTDAENITLLERFDMYQSNTN FNRFERFDIEDDEDTQ NFASVDQTKIPDTFGPSPPQ 
Sbjct: 858  QTDAENITLLERFDMYQSNTNAFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGPSPPQG 917

Query: 259  KYQEGSPEAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGH 318
            KYQEG P+AEV DQHLERDVIQQAY SKE RQ EQVAIKRKTKRTAAFLMDYEKTIIPGH
Sbjct: 918  KYQEGPPDAEVGDQHLERDVIQQAYVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGH 977

Query: 319  IYQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPL 378
            IYQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVL GRLFTDGSREVYYPAPL
Sbjct: 978  IYQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLCGRLFTDGSREVYYPAPL 1037

Query: 379  LELWMKSIRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGA 438
            LELWMKSIR+PPDSPSVRNSAPLPPEPSLSSLPERVNFPDH DFAYEN YSGVGSQSFGA
Sbjct: 1038 LELWMKSIRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHTDFAYENHYSGVGSQSFGA 1097

Query: 439  SIEKLRTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEH 498
            SIEKLRTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEH
Sbjct: 1098 SIEKLRTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEH 1157

Query: 499  GVFVYNPETNSVRSNKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLV 558
            GVFV NPETNSVRSNKKRPY SSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLV
Sbjct: 1158 GVFVSNPETNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHSDPNFKLARLSENDPDLLV 1217

Query: 559  ETAPTQTQVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAML 618
            ETAPTQTQVTQPAIK+PPADKITNSIRMQMKAHF+TPGAPPAESLNNLAAGMNPKAAAML
Sbjct: 1218 ETAPTQTQVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAAGMNPKAAAML 1277

Query: 619  FYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 626
            FYQTCVLASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 1278 FYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 1309

[Close]

BLAST of CmaCh04G011060 vs. TAIR 10
Match: AT5G05490.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-124
Identity = 290/643 (45.10%), Postives = 386/643 (60.03%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120
           GGVVIVYERKVK+L++DV R LVEIN AW+ K+ P+ T++PKGK+ A+KEA T P+ +  
Sbjct: 61  GGVVIVYERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEA 120

Query: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180
           D GD E Q+ N     + M FQQT F +MRL   DE +++     +D    FHQ DAENI
Sbjct: 121 DFGDFE-QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENI 180

Query: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQ-----DKY 240
           TL E    +Q+N  T++RFERFDIE D++TQ N    +  +IP T  PSPP+     +  
Sbjct: 181 TLFEYHGSFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGV 240

Query: 241 QEGSPEAEVQDQHLERDVIQQAYESKELRQVEQ----VAIKRKTKRTAAFLMDYEKTIIP 300
              SP+ + Q ++  RD   +  E + +   E+       K++ ++TA   MDYE+TII 
Sbjct: 241 NPTSPQRQEQQEN-RRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIA 300

Query: 301 GHIYQSWLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPA 360
           GH+YQSWL+D SD++ R  K++ R      M+     ++PP     +LF    ++  YP 
Sbjct: 301 GHVYQSWLQDTSDILCRGEKRKVRGTIRPDMESFKRANMPPT----QLF---EKDSSYPP 360

Query: 361 PLLELWMKSIRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSF 420
            L +LW K+ +    S S      L  E S   + ER++     D    ++ S   SQ+ 
Sbjct: 361 QLYQLWSKNTQVLQTSSSESRHPDLRAEQSPGFVQERMHNHHQTD---HHERSDTSSQNL 420

Query: 421 GASIEKLRTKPVNDDIHAEILLEELR--PDFMNNVMGMAERNQVVTPGNSGIGVRSVSSS 480
            +  E LRT         E ++   R  P+ +N     A+ N  VTP  SG  VRS+ S+
Sbjct: 421 DSPAEILRTVRTGKGASVESMMAGSRASPETINR--QAADIN--VTPFYSGDDVRSMPST 480

Query: 481 ASEHGVFVYNPETNSVRS---NKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSE 540
            S  G    N    S +S   N+KRP  S R+   GLEPVAEE PW H +  F+ + L E
Sbjct: 481 PSARGAASINNIEISSKSRMPNRKRPNSSPRR---GLEPVAEERPWEHREYEFEFSMLPE 540

Query: 541 N----DPDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLA 600
                D ++L ETA TQ   TQ  + N   + IT+SI+  +K HF TPGAP  ESLN LA
Sbjct: 541 KRFTADKEILFETASTQ---TQKPVCNQSDEMITDSIKSHLKTHFETPGAPQVESLNKLA 600

Query: 601 AGMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 626
            GM+  AAA LF+Q+CVLA+   +KVNQ  P+GDI I++G  M
Sbjct: 601 VGMDRNAAAKLFFQSCVLATRGVIKVNQAEPYGDILIARGPNM 617

[Close]

BLAST of CmaCh04G011060 vs. TAIR 10
Match: AT5G05490.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 430.6 bits (1106), Expect = 2.1e-120
Identity = 284/637 (44.58%), Postives = 380/637 (59.65%), Query Frame = 0


Query: 7   LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIV 66
           LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIV
Sbjct: 17  LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76

Query: 67  YERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHE 126
           YERKVK+L++DV R LVEIN AW+ K+ P+ T++PKGK+ A+KEA T P+ +  D GD E
Sbjct: 77  YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136

Query: 127 AQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERF 186
            Q+ N     + M FQQT F +MRL   DE +++     +D    FHQ DAENITL E  
Sbjct: 137 -QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYH 196

Query: 187 DMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQ-----DKYQEGSPE 246
             +Q+N  T++RFERFDIE D++TQ N    +  +IP T  PSPP+     +     SP+
Sbjct: 197 GSFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQ 256

Query: 247 AEVQDQHLERDVIQQAYESKELRQVEQ----VAIKRKTKRTAAFLMDYEKTIIPGHIYQS 306
            + Q ++  RD   +  E + +   E+       K++ ++TA   MDYE+TII GH+YQS
Sbjct: 257 RQEQQEN-RRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAGHVYQS 316

Query: 307 WLKDVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELW 366
           WL+D SD++ R  K++ R      M+     ++PP     +LF    ++  YP  L +LW
Sbjct: 317 WLQDTSDILCRGEKRKVRGTIRPDMESFKRANMPPT----QLF---EKDSSYPPQLYQLW 376

Query: 367 MKSIRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEK 426
            K+ +    S S      L  E S   + ER++     D    ++ S   SQ+  +  E 
Sbjct: 377 SKNTQVLQTSSSESRHPDLRAEQSPGFVQERMHNHHQTD---HHERSDTSSQNLDSPAEI 436

Query: 427 LRTKPVNDDIHAEILLEELR--PDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGV 486
           LRT         E ++   R  P+ +N     A+ N  VTP  SG  VRS+ S+ S  G 
Sbjct: 437 LRTVRTGKGASVESMMAGSRASPETINR--QAADIN--VTPFYSGDDVRSMPSTPSARGA 496

Query: 487 FVYNPETNSVRS---NKKRPYYSSRQSSGGLEPVAEENPWHHSDPNFKLARLSEN----D 546
              N    S +S   N+KRP  S R+   GLEPVAEE PW H +  F+ + L E     D
Sbjct: 497 ASINNIEISSKSRMPNRKRPNSSPRR---GLEPVAEERPWEHREYEFEFSMLPEKRFTAD 556

Query: 547 PDLLVETAPTQTQVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPK 606
            ++L ETA TQ   TQ  + N   + IT+SI+  +K HF TPGAP  ESLN LA GM+  
Sbjct: 557 KEILFETASTQ---TQKPVCNQSDEMITDSIKSHLKTHFETPGAPQVESLNKLAVGMDRN 616

Query: 607 AAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 626
           AAA LF+Q+CVLA+   +KVNQ  P+GDI I++G  M
Sbjct: 617 AAAKLFFQSCVLATRGVIKVNQAEPYGDILIARGPNM 627

[Close]

BLAST of CmaCh04G011060 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 75.1 bits (183), Expect = 2.2e-13
Identity = 75/247 (30.36%), Postives = 115/247 (46.56%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATV-IPKGKSVAKKEAATRPKKDP 120
            GVV +Y +KV  LY D   L       W  KA     V +P+    A  E+ T P+   
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLL-----NTWVAKAFVSTQVNLPEDARQAPPESVTLPQALN 120

Query: 121 KDVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAEN 180
            D  D E  +++  +D +  + ++    T ++ +  +PY+     ED  S        E+
Sbjct: 121 LDEFDLEDDTLDMEFD-NHTRSEEDITLTDQIPTGIDPYVAVTFDEDIIS--------ES 180

Query: 181 ITLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGS 240
           I +    D+ QS           D+E   +T  +    D     DT G   P++  +E +
Sbjct: 181 IPM----DVDQSTEPVSRHTGEIDVETAHETGPDNEPRDSNIAFDT-GTYSPRNVTEEFT 225

Query: 241 PEAEVQD 247
              EVQD
Sbjct: 241 ---EVQD 225

[Close]

BLAST of CmaCh04G011060 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-12
Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKK--- 120
            GVV +Y RKV  L++D +  L+++ +A++  A      +P  +S A   + T P+    
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVD----LPPEESTAPYHSITLPETFDL 120

Query: 121 DPKDVGDHEAQSINF 133
           D  ++ D+E    N+
Sbjct: 121 DDFELPDNEIFQGNY 131

[Close]

BLAST of CmaCh04G011060 vs. TAIR 10
Match: AT5G40840.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 57.8 bits (138), Expect = 3.7e-08
Identity = 62/231 (26.84%), Postives = 103/231 (44.59%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGIL 60
           MFYSH L++RK PLG IW+AA    K+ + ++   +I    ++IL   +  +  R+   L
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  MGGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDP 120
           + GVV +Y +KV  L++D  + L+ + E                  VAK       +++ 
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKE-----------------FVAK-------ERNR 120

Query: 121 KDVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYI--HEKTVEDDASHNFHQTDA 180
           +  G     SI       P +F+  AF    L+      +  HE     D S    +T+ 
Sbjct: 121 EKTGVSLPASIECFSIALPERFELDAFDLGVLEDFHGGNVKPHEDITLKDGS---QETER 180

Query: 181 ENITLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFA---SVDQTKIPDT 226
            ++  +ERFDM +    TF+  E F    +E+   +FA    +D   + DT
Sbjct: 181 MDMYSMERFDMEEDLLFTFH--ETFSTNHNENKHESFAHDMELDAENVRDT 202

HSP 2 Score: 40.0 bits (92), Expect = 8.0e-03
Identity = 18/45 (40.00%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 577 SLNNLAAGMNPKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISK 622
           SL  L  G   K +A LFY+T VL +  Y++V Q  P+ D+F+ +
Sbjct: 757 SLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLMR 801

The following BLAST results are available for this feature:

BLAST of CmaCh04G011060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7T7	3.0e-119	44.58	Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE...	[more]
Q9FQ19	3.1e-12	30.36	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE...	[more]
Q8W1Y0	2.0e-11	34.81	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]
Q6TEL1	1.3e-10	35.04	Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad...	[more]
Q3SWX9	1.7e-10	35.04	Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 ...	[more]

BLAST of CmaCh04G011060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JET8	0.0e+00	100.00	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GXZ1	0.0e+00	96.80	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JEF3	6.0e-309	100.00	sister chromatid cohesion 1 protein 1-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1FMB0	1.1e-299	85.44	sister chromatid cohesion 1 protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447...	[more]
A0A6J1KBX6	8.2e-298	84.64	sister chromatid cohesion 1 protein 1 OS=Cucurbita maxima OX=3661 GN=LOC11149189...	[more]

BLAST of CmaCh04G011060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985848.1	0.0e+00	100.00	sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita maxima]	[more]
XP_023552287.1	0.0e+00	97.60	sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957007.1	0.0e+00	96.80	sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita moschata]	[more]
KAG7031552.1	0.0e+00	94.24	Sister chromatid cohesion 1 protein 1, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6600915.1	0.0e+00	92.72	putative methyltransferase PMT23, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of CmaCh04G011060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05490.2	1.8e-124	45.10	Rad21/Rec8-like family protein	[more]
AT5G05490.1	2.1e-120	44.58	Rad21/Rec8-like family protein	[more]
AT3G59550.1	2.2e-13	30.36	Rad21/Rec8-like family protein	[more]
AT5G16270.1	1.4e-12	34.81	sister chromatid cohesion 1 protein 4	[more]
AT5G40840.1	3.7e-08	26.84	Rad21/Rec8-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	PFAM	PF04824	Rad21_Rec8	coord: 576..625 e-value: 2.3E-15 score: 55.6
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..101 e-value: 3.0E-35 score: 120.7
IPR023093	ScpA-like, C-terminal	GENE3D	1.10.10.580	Structural maintenance of chromosome 1. Chain E	coord: 551..625 e-value: 3.7E-7 score: 31.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..515
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..387
None	No IPR available	PANTHER	PTHR12585:SF64	SISTER CHROMATID COHESION 1 PROTEIN 1	coord: 1..625
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..625
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 566..625

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G011060.1	CmaCh04G011060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033540	fatty acid beta-oxidation using acyl-CoA oxidase
biological_process	GO:0055088	lipid homeostasis
biological_process	GO:0001676	long-chain fatty acid metabolic process
biological_process	GO:0010032	meiotic chromosome condensation
biological_process	GO:0051754	meiotic sister chromatid cohesion, centromeric
biological_process	GO:0051455	monopolar spindle attachment to meiosis I kinetochore
biological_process	GO:0000038	very long-chain fatty acid metabolic process
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0008278	cohesin complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0071949	FAD binding
molecular_function	GO:0005504	fatty acid binding
molecular_function	GO:0016401	palmitoyl-CoA oxidase activity
molecular_function	GO:0005515	protein binding