CmaCh04G010740 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G010740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionLOB domain-containing protein
LocationCma_Chr04: 5545442 .. 5546708 (-)
RNA-Seq ExpressionCmaCh04G010740
SyntenyCmaCh04G010740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTGATTTATAGGTATTTTTGTTACTCTTTTTTCATTCTTCTTATAGATCTTTGGTGGGAATCCTCGTACACTGCCTATAGAGATGACCCACATCTTCATATCACCATTTCAAACTACCTAAACCTTCCCTTCTCTCTCTCTCTCTCTCTTCTTTCTTCAAGTCAAGATCAGAGCATGCCTGAATGTCCAAAGAAAGGTAAGAAAAACTCTCACTTTCTTCGCCCGAGCAATTTCGTTCACGGTTTTAACTCGTCGACAAAGAACAAAGTTATTCATGTCTTAACCGGTTAAGTTTCGAGGCGGGTTTTTTTTAACCCCTCAATTTTGTTTTATATGGTTGTATGTATTAGAGAGAAATTAACTGAGAGTTCGATTATGATAATCGAATTGACTTTATTGAGTAACTTTTTTTCGTGTCACTGTGTATGTAGAGAGAGATTCGAAGAGATAGCGAAGAAGATAAAGAGAGAAACCGATGTATCATCAAATATTCCTCCACAACAAATCATGGGGAGACGCCATTCCTTGCAGGCTCCTCCAGGGATACTCAACACCATTACTCCATGCGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCGCCCCCTACTTCTCGCCTCACGAGCCTCATAAATTCGCCTCGGTTCACAAGGTTTTCGGTGCTAGCAATGTCTCGAAGATGCTCATGGTAACTCGATGTCGTATTATTATAAGTTTAGTCATTAAAATTTTCAAGTTAATTTATCTTAATTATTGTATTTTAGGAAGTTTCCGAGAACCATAGAGCAGATGCTGCGAACAGCTTAGTTTACGAAGCGAATGTGAGGCTTCGAGATCCTGTTTATGGGTGCATGGGCGCCATTTCGTCCCTACAACACCAAATCCAAGCCTTACAAATTGAGTTAAACGCGGTAAGAGCTGAGATCTTAAGACACAAATTTAGAGAAGCTAGTAATATGATTCACTCTTCTCCTCAACCACAACAACAACAACATGTGTCTTTTCTTTCATCTTCGGCCGAGGTCGTTTCGGTTGCCGTTCCACCACCGCCACCGTCTCTACCGCACAACGCTTCTTCCTCTTCCTCCCCCTTGTACAACCGTCCCACAGTGGCAACGGATTATAATACTATTTCAAGCAACGAAAATGTTACCTACTTTGTTAGTACTACAAGTACCGATCATCAATTGAATTCTTAGAGAAACGCAAATTTACATGGAATAAGATTGAAAGAAAAAAAGTTCGAGTGAA

mRNA sequence

AGTTGATTTATAGGTATTTTTGTTACTCTTTTTTCATTCTTCTTATAGATCTTTGGTGGGAATCCTCGTACACTGCCTATAGAGATGACCCACATCTTCATATCACCATTTCAAACTACCTAAACCTTCCCTTCTCTCTCTCTCTCTCTCTTCTTTCTTCAAGTCAAGATCAGAGCATGCCTGAATGTCCAAAGAAAGAGAGAGATTCGAAGAGATAGCGAAGAAGATAAAGAGAGAAACCGATGTATCATCAAATATTCCTCCACAACAAATCATGGGGAGACGCCATTCCTTGCAGGCTCCTCCAGGGATACTCAACACCATTACTCCATGCGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCGCCCCCTACTTCTCGCCTCACGAGCCTCATAAATTCGCCTCGGTTCACAAGGTTTTCGGTGCTAGCAATGTCTCGAAGATGCTCATGGAAGTTTCCGAGAACCATAGAGCAGATGCTGCGAACAGCTTAGTTTACGAAGCGAATGTGAGGCTTCGAGATCCTGTTTATGGGTGCATGGGCGCCATTTCGTCCCTACAACACCAAATCCAAGCCTTACAAATTGAGTTAAACGCGGTAAGAGCTGAGATCTTAAGACACAAATTTAGAGAAGCTAGTAATATGATTCACTCTTCTCCTCAACCACAACAACAACAACATGTGTCTTTTCTTTCATCTTCGGCCGAGGTCGTTTCGGTTGCCGTTCCACCACCGCCACCGTCTCTACCGCACAACGCTTCTTCCTCTTCCTCCCCCTTGTACAACCGTCCCACAGTGGCAACGGATTATAATACTATTTCAAGCAACGAAAATGTTACCTACTTTGTTAGTACTACAAGTACCGATCATCAATTGAATTCTTAGAGAAACGCAAATTTACATGGAATAAGATTGAAAGAAAAAAAGTTCGAGTGAA

Coding sequence (CDS)

ATGTCCAAAGAAAGAGAGAGATTCGAAGAGATAGCGAAGAAGATAAAGAGAGAAACCGATGTATCATCAAATATTCCTCCACAACAAATCATGGGGAGACGCCATTCCTTGCAGGCTCCTCCAGGGATACTCAACACCATTACTCCATGCGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCGCCCCCTACTTCTCGCCTCACGAGCCTCATAAATTCGCCTCGGTTCACAAGGTTTTCGGTGCTAGCAATGTCTCGAAGATGCTCATGGAAGTTTCCGAGAACCATAGAGCAGATGCTGCGAACAGCTTAGTTTACGAAGCGAATGTGAGGCTTCGAGATCCTGTTTATGGGTGCATGGGCGCCATTTCGTCCCTACAACACCAAATCCAAGCCTTACAAATTGAGTTAAACGCGGTAAGAGCTGAGATCTTAAGACACAAATTTAGAGAAGCTAGTAATATGATTCACTCTTCTCCTCAACCACAACAACAACAACATGTGTCTTTTCTTTCATCTTCGGCCGAGGTCGTTTCGGTTGCCGTTCCACCACCGCCACCGTCTCTACCGCACAACGCTTCTTCCTCTTCCTCCCCCTTGTACAACCGTCCCACAGTGGCAACGGATTATAATACTATTTCAAGCAACGAAAATGTTACCTACTTTGTTAGTACTACAAGTACCGATCATCAATTGAATTCTTAG

Protein sequence

MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSAEVVSVAVPPPPPSLPHNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQLNS
Homology
BLAST of CmaCh04G010740 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 2.1e-65
Identity = 145/230 (63.04%), Postives = 164/230 (71.30%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MS+ERERFEEI KKIKRE D      P Q+ G R  +  PPG LNTITPCAACKLLRRRC
Sbjct: 1   MSRERERFEEIGKKIKREADAW----PHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEV E+ RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAIS+LQ Q+QALQ EL AVR+EIL++K REA   + +   P   Q   F +S  
Sbjct: 121 VYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA---VATLIVPSNSQVAGFHNSGG 180

Query: 181 EVVSVAVPP------PPPSLPHNASSSSSPLYNRPTVA-TDYNTISSNEN 224
             VSV  PP      PP     +  S SS ++++PT    +Y  I S  N
Sbjct: 181 --VSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRDLEYGNIESENN 221

BLAST of CmaCh04G010740 vs. ExPASy Swiss-Prot
Match: Q9AT61 (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-55
Identity = 133/258 (51.55%), Postives = 162/258 (62.79%), Query Frame = 0

Query: 1   MSKERERF---EEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPG-ILNTITPCAACKLL 60
           MS+ERE F    E  KKIK++    +      +MG R  +  PPG  LNT+TPCAACKLL
Sbjct: 1   MSREREGFGEYYETVKKIKKDPAFETT-TDHAVMGIRRHVAVPPGTTLNTVTPCAACKLL 60

Query: 61  RRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVR 120
           RRRCA+ECPF+PYFSPHEPHKFA+VHKVFGASNVSKML+EV E+ R DAANSLVYEAN+R
Sbjct: 61  RRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR 120

Query: 121 LRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFL 180
           LRDP+YGCMGAIS+LQH IQ+LQ EL  VR EILRHK++EA+ +             S +
Sbjct: 121 LRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSV 180

Query: 181 SSSAEVVSVAV----PPPPPSLPHNASSSSSPLYNRPT-----------VATDYNTISSN 240
           S     ++ A+    PPPPP  P      SS     PT           V++  ++ SS 
Sbjct: 181 SCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSA 240

BLAST of CmaCh04G010740 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 0

Query: 48  TPCAACKLLRRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAAN 107
           +PCA+CKLLRRRCA++C FAPYF P +PHKFA VHKVFGASNVSKML E+  + RADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 108 SLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFR-EASNMIHSSPQ 167
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ++L   +AEIL  + + E +   H    
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 168 PQQQQHVSFLSSSAEV 183
              Q H + L ++  +
Sbjct: 127 ELDQDHKALLLNNNNI 142

BLAST of CmaCh04G010740 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-35
Identity = 73/134 (54.48%), Postives = 99/134 (73.88%), Query Frame = 0

Query: 46  TITPCAACKLLRRRCAQE-CPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRAD 105
           T++PCA CKLLRR+C ++ C FAPYF   EP+KFA VHK+FGASNV+KML E+SENHR+D
Sbjct: 11  TVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSD 70

Query: 106 AANSLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSS 165
           A +S+VYEAN R++DPVYGC+G ISSL  Q++ LQ +L   +AE++  +     + IH+ 
Sbjct: 71  AVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR---TLHRIHTK 130

Query: 166 PQPQQQQHVSFLSS 179
           P P     V+F S+
Sbjct: 131 PPPYTASTVTFPSN 141

BLAST of CmaCh04G010740 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-35
Identity = 70/112 (62.50%), Postives = 90/112 (80.36%), Query Frame = 0

Query: 48  TPCAACKLLRRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAAN 107
           +PCAACKLLRRRCAQ+C F+PYF   EP KFA+VH+VFGASNV+KML E+  + R DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 108 SLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASN 160
           S+VYEAN R+RDPVYGC+GAISSLQ QI  LQ +L   +AE++  + R+++N
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTN 123

BLAST of CmaCh04G010740 vs. ExPASy TrEMBL
Match: A0A6J1J1P9 (LOB domain-containing protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111482615 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.4e-127
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA
Sbjct: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180

Query: 181 EVVSVAVPPPPPSLPHNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQLNS 240
           EVVSVAVPPPPPSLPHNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQLNS
Sbjct: 181 EVVSVAVPPPPPSLPHNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQLNS 239

BLAST of CmaCh04G010740 vs. ExPASy TrEMBL
Match: A0A6J1FVC7 (LOB domain-containing protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111447627 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.6e-121
Identity = 232/245 (94.69%), Postives = 235/245 (95.92%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERF+EIAKKIKRETDVSSNIPPQQIMGRRHSLQA PGILNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQASPGILNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEVSEN RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENRRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAISSLQHQIQALQIELN VRAEILRHKFREASNMIHSSPQPQQQQH SFLSSSA
Sbjct: 121 VYGCMGAISSLQHQIQALQIELNTVRAEILRHKFREASNMIHSSPQPQQQQHASFLSSSA 180

Query: 181 EVVSVAVPPPPPSLP------HNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD 240
           EVVSVAVPPPPPSLP      H+ASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD
Sbjct: 181 EVVSVAVPPPPPSLPLPPPSHHDASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD 240

BLAST of CmaCh04G010740 vs. ExPASy TrEMBL
Match: A0A1S3C502 (LOB domain-containing protein 15 OS=Cucumis melo OX=3656 GN=LOC103496729 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.7e-107
Identity = 214/247 (86.64%), Postives = 226/247 (91.50%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERF+EIAKKIKRETDVSSNIPPQQIMGRRHSLQ  PG LNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQGSPGALNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEVSEN RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAIS+LQHQIQ+LQ ELNAVRAEILRHKFREA+NMIHSSP   QQQHV FLSSS+
Sbjct: 121 VYGCMGAISALQHQIQSLQAELNAVRAEILRHKFREANNMIHSSP---QQQHVPFLSSSS 180

Query: 181 --EVVSVAVPPPPPSLP----HNASSSSSPLYNRPTV--ATDYNTISSNENVTYFVSTTS 240
             EVVSVA+PPPPP LP    H+ASSSSS LYNRPTV  A DY+TISS+ENVTYFVST+S
Sbjct: 181 STEVVSVALPPPPPPLPPPHHHDASSSSSSLYNRPTVAAAADYSTISSDENVTYFVSTSS 240

BLAST of CmaCh04G010740 vs. ExPASy TrEMBL
Match: A0A0A0KM94 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G219380 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.2e-105
Identity = 211/248 (85.08%), Postives = 223/248 (89.92%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERF+EIAKKIKRETDVSSNIPPQQIMGRRHSLQ PPG LNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQGPPGALNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEVS+N RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSDNQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAIS+LQHQIQ+LQ ELNAVRAEILRHKFREA+N+IHSSP   QQQHV FLSSS+
Sbjct: 121 VYGCMGAISALQHQIQSLQAELNAVRAEILRHKFREANNIIHSSP---QQQHVPFLSSSS 180

Query: 181 E-VVSVAVPPPPPSLP------HNASSSSSPLYNRPTV--ATDYNTISSNENVTYFVSTT 240
             VVSVA+PPPPP  P      H+ASSSSS LYNR TV  A DY+TISSNENVTYFV T+
Sbjct: 181 TVVVSVALPPPPPPPPLPPPHHHDASSSSSSLYNRRTVAAAADYSTISSNENVTYFVGTS 240

BLAST of CmaCh04G010740 vs. ExPASy TrEMBL
Match: A0A6J1D0I7 (LOB domain-containing protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015933 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 199/249 (79.92%), Postives = 215/249 (86.35%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDV--SSNIPPQQIMGRRH-SLQAPPGILNTITPCAACKLLR 60
           MSKERERF+EIAKKIKRETDV  SSN  P QIMGRR  +LQ+PPG LNTITPCAACKLLR
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSSSNNLPHQIMGRRQTTLQSPPGTLNTITPCAACKLLR 60

Query: 61  RRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRL 120
           RRC QECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEV+EN RADAANSLVYEANVRL
Sbjct: 61  RRCVQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVAENQRADAANSLVYEANVRL 120

Query: 121 RDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLS 180
           RDPVYGCMGAIS+LQHQIQALQ+ELNAVRAEILR+K+REA N+IHSSP     QHV FLS
Sbjct: 121 RDPVYGCMGAISALQHQIQALQVELNAVRAEILRYKYREA-NIIHSSP-----QHVPFLS 180

Query: 181 SSAEVVSVAVPPPPPSLP-----HNASSSSSPLYNRP--TVATDYNTISSNENVTYFVST 240
           SSAEVVS+AVPPPPP LP       ++SSSS LYNRP   VA DY+TISS+ENV YFV  
Sbjct: 181 SSAEVVSIAVPPPPPLLPPPPHYDGSASSSSSLYNRPAVAVAADYSTISSDENVPYFV-R 240

BLAST of CmaCh04G010740 vs. NCBI nr
Match: XP_022984247.1 (LOB domain-containing protein 15-like [Cucurbita maxima])

HSP 1 Score: 464.2 bits (1193), Expect = 7.0e-127
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA
Sbjct: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180

Query: 181 EVVSVAVPPPPPSLPHNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQLNS 240
           EVVSVAVPPPPPSLPHNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQLNS
Sbjct: 181 EVVSVAVPPPPPSLPHNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQLNS 239

BLAST of CmaCh04G010740 vs. NCBI nr
Match: XP_023544729.1 (LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 8.9e-122
Identity = 234/245 (95.51%), Postives = 237/245 (96.73%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERF+EIAKKIKRETDVSSNIPPQQIMGRRHSLQA PGILNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQASPGILNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEVSEN RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA
Sbjct: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180

Query: 181 EVVSVAVPPPPPSLP------HNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD 240
           EVVSVAVPPPPPSLP      H+ASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD
Sbjct: 181 EVVSVAVPPPPPSLPLPPPSHHDASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD 240

BLAST of CmaCh04G010740 vs. NCBI nr
Match: KAG7031522.1 (LOB domain-containing protein 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.5 bits (1142), Expect = 5.8e-121
Identity = 232/245 (94.69%), Postives = 236/245 (96.33%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERF+EIAKKIKRETDVSSNIPPQQIMGRRHSLQA PGILNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQASPGILNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEVSEN RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQH SFLSSSA
Sbjct: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHASFLSSSA 180

Query: 181 EVVSVAVPPPPPSLP------HNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD 240
           EVVSVAVPPPPPSLP      H+ASSSSSPLYNRPTVATDYNTISSNENVTYFVSTT+TD
Sbjct: 181 EVVSVAVPPPPPSLPLPPPSHHDASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTTTD 240

BLAST of CmaCh04G010740 vs. NCBI nr
Match: XP_022942658.1 (LOB domain-containing protein 15-like [Cucurbita moschata])

HSP 1 Score: 444.1 bits (1141), Expect = 7.5e-121
Identity = 232/245 (94.69%), Postives = 235/245 (95.92%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERF+EIAKKIKRETDVSSNIPPQQIMGRRHSLQA PGILNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQASPGILNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEVSEN RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENRRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAISSLQHQIQALQIELN VRAEILRHKFREASNMIHSSPQPQQQQH SFLSSSA
Sbjct: 121 VYGCMGAISSLQHQIQALQIELNTVRAEILRHKFREASNMIHSSPQPQQQQHASFLSSSA 180

Query: 181 EVVSVAVPPPPPSLP------HNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD 240
           EVVSVAVPPPPPSLP      H+ASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD
Sbjct: 181 EVVSVAVPPPPPSLPLPPPSHHDASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTD 240

BLAST of CmaCh04G010740 vs. NCBI nr
Match: XP_008456927.1 (PREDICTED: LOB domain-containing protein 15 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 214/247 (86.64%), Postives = 226/247 (91.50%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MSKERERF+EIAKKIKRETDVSSNIPPQQIMGRRHSLQ  PG LNTITPCAACKLLRRRC
Sbjct: 1   MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQGSPGALNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEVSEN RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAIS+LQHQIQ+LQ ELNAVRAEILRHKFREA+NMIHSSP   QQQHV FLSSS+
Sbjct: 121 VYGCMGAISALQHQIQSLQAELNAVRAEILRHKFREANNMIHSSP---QQQHVPFLSSSS 180

Query: 181 --EVVSVAVPPPPPSLP----HNASSSSSPLYNRPTV--ATDYNTISSNENVTYFVSTTS 240
             EVVSVA+PPPPP LP    H+ASSSSS LYNRPTV  A DY+TISS+ENVTYFVST+S
Sbjct: 181 STEVVSVALPPPPPPLPPPHHHDASSSSSSLYNRPTVAAAADYSTISSDENVTYFVSTSS 240

BLAST of CmaCh04G010740 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 250.4 bits (638), Expect = 1.5e-66
Identity = 145/230 (63.04%), Postives = 164/230 (71.30%), Query Frame = 0

Query: 1   MSKERERFEEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRC 60
           MS+ERERFEEI KKIKRE D      P Q+ G R  +  PPG LNTITPCAACKLLRRRC
Sbjct: 1   MSRERERFEEIGKKIKREADAW----PHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRC 60

Query: 61  AQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDP 120
           AQECPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEV E+ RADAANSLVYEANVRLRDP
Sbjct: 61  AQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDP 120

Query: 121 VYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSA 180
           VYGCMGAIS+LQ Q+QALQ EL AVR+EIL++K REA   + +   P   Q   F +S  
Sbjct: 121 VYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA---VATLIVPSNSQVAGFHNSGG 180

Query: 181 EVVSVAVPP------PPPSLPHNASSSSSPLYNRPTVA-TDYNTISSNEN 224
             VSV  PP      PP     +  S SS ++++PT    +Y  I S  N
Sbjct: 181 --VSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRDLEYGNIESENN 221

BLAST of CmaCh04G010740 vs. TAIR 10
Match: AT2G30340.1 (LOB domain-containing protein 13 )

HSP 1 Score: 216.5 bits (550), Expect = 2.4e-56
Identity = 133/258 (51.55%), Postives = 162/258 (62.79%), Query Frame = 0

Query: 1   MSKERERF---EEIAKKIKRETDVSSNIPPQQIMGRRHSLQAPPG-ILNTITPCAACKLL 60
           MS+ERE F    E  KKIK++    +      +MG R  +  PPG  LNT+TPCAACKLL
Sbjct: 1   MSREREGFGEYYETVKKIKKDPAFETT-TDHAVMGIRRHVAVPPGTTLNTVTPCAACKLL 60

Query: 61  RRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVR 120
           RRRCA+ECPF+PYFSPHEPHKFA+VHKVFGASNVSKML+EV E+ R DAANSLVYEAN+R
Sbjct: 61  RRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR 120

Query: 121 LRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFL 180
           LRDP+YGCMGAIS+LQH IQ+LQ EL  VR EILRHK++EA+ +             S +
Sbjct: 121 LRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSV 180

Query: 181 SSSAEVVSVAV----PPPPPSLPHNASSSSSPLYNRPT-----------VATDYNTISSN 240
           S     ++ A+    PPPPP  P      SS     PT           V++  ++ SS 
Sbjct: 181 SCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSA 240

BLAST of CmaCh04G010740 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 151.4 bits (381), Expect = 9.4e-37
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 0

Query: 48  TPCAACKLLRRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAAN 107
           +PCA+CKLLRRRCA++C FAPYF P +PHKFA VHKVFGASNVSKML E+  + RADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 108 SLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFR-EASNMIHSSPQ 167
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ++L   +AEIL  + + E +   H    
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 168 PQQQQHVSFLSSSAEV 183
              Q H + L ++  +
Sbjct: 127 ELDQDHKALLLNNNNI 142

BLAST of CmaCh04G010740 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-36
Identity = 70/112 (62.50%), Postives = 90/112 (80.36%), Query Frame = 0

Query: 48  TPCAACKLLRRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAAN 107
           +PCAACKLLRRRCAQ+C F+PYF   EP KFA+VH+VFGASNV+KML E+  + R DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 108 SLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASN 160
           S+VYEAN R+RDPVYGC+GAISSLQ QI  LQ +L   +AE++  + R+++N
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTN 123

BLAST of CmaCh04G010740 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-36
Identity = 73/134 (54.48%), Postives = 99/134 (73.88%), Query Frame = 0

Query: 46  TITPCAACKLLRRRCAQE-CPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRAD 105
           T++PCA CKLLRR+C ++ C FAPYF   EP+KFA VHK+FGASNV+KML E+SENHR+D
Sbjct: 11  TVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSD 70

Query: 106 AANSLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSS 165
           A +S+VYEAN R++DPVYGC+G ISSL  Q++ LQ +L   +AE++  +     + IH+ 
Sbjct: 71  AVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR---TLHRIHTK 130

Query: 166 PQPQQQQHVSFLSS 179
           P P     V+F S+
Sbjct: 131 PPPYTASTVTFPSN 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L5T52.1e-6563.04LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
Q9AT613.3e-5551.55LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 S... [more]
Q8LBW31.3e-3556.62LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SA512.9e-3554.48LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=... [more]
Q9SHE92.9e-3562.50LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1J1P93.4e-127100.00LOB domain-containing protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC11148261... [more]
A0A6J1FVC73.6e-12194.69LOB domain-containing protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111447... [more]
A0A1S3C5026.7e-10786.64LOB domain-containing protein 15 OS=Cucumis melo OX=3656 GN=LOC103496729 PE=3 SV... [more]
A0A0A0KM946.2e-10585.08LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G219380 PE=3 SV... [more]
A0A6J1D0I71.4e-9379.92LOB domain-containing protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LO... [more]
Match NameE-valueIdentityDescription
XP_022984247.17.0e-127100.00LOB domain-containing protein 15-like [Cucurbita maxima][more]
XP_023544729.18.9e-12295.51LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo][more]
KAG7031522.15.8e-12194.69LOB domain-containing protein 15, partial [Cucurbita argyrosperma subsp. argyros... [more]
XP_022942658.17.5e-12194.69LOB domain-containing protein 15-like [Cucurbita moschata][more]
XP_008456927.11.4e-10686.64PREDICTED: LOB domain-containing protein 15 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT2G40470.11.5e-6663.04LOB domain-containing protein 15 [more]
AT2G30340.12.4e-5651.55LOB domain-containing protein 13 [more]
AT2G30130.19.4e-3756.62Lateral organ boundaries (LOB) domain family protein [more]
AT1G31320.12.1e-3662.50LOB domain-containing protein 4 [more]
AT1G16530.12.1e-3654.48ASYMMETRIC LEAVES 2-like 9 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..206
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 34..227
NoneNo IPR availablePANTHERPTHR31301:SF101LOB DOMAIN PROTEINcoord: 34..227
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 49..146
e-value: 5.2E-40
score: 136.0
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 48..149
score: 25.519896

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G010740.1CmaCh04G010740.1mRNA