CmaCh04G009880 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATTATTGGGTTTCTAAATCTTTTCATTTATCCATTTTTAAACATGATTATTATAAGTCAATTATAATTATCTTTTATTTTCTTCCTTTGTTCTTCAGGCTATCCCTCCCATGAATGACAACCCAGTAGAACATTTGGATTCTACTTACAGACATGTAAGTGGATGACCTAAATTTTTGTGTTTGTGTTTGTTTTGTTTAAGGTTTTGTTAATTAAAAGAAATTGTTGTTGTCGCTGTCGATGTGATATGCAGGTAGTGGATGTGATTTTTACGAGCCTTTTGAATTTTTTAGGCAGATTAGGCGGTCTCTATATTAATCTAGGGGGTCAAGGCTATCTTCAAATTTATTCTCCTCGAGCCTTTTGGGATGTTGATTCATTTCGAGAAATGTTGCGTAAGATTTTCTCTTCTGTATTGTCGGACTGTTGATCCTATGAATGGATTCTAATTAACTGGCTGGCTTAATACGAGTAATGAATGCAGGTGAGGTGCTTAGTGATCAGCATAGGGTTCTGCAAGAGAATGATGCAATTATTTGGCATAATACAAATTTGCAGTCTTTGTTTAGTCTCATCCCTCAAGAGCGTCGAGTAATAGGTACGTATCTATTATGTAATCAATTTGTGGCTAGAAAGTGCTGATAGCTCCGTTTGAATATCGACCTCCATATTTAAGTTTACTTAACTTAGTTTTTATGGATGTTTATAGGGTGCTTGCTAGAGGATCAGTATGGAAATAAACAAGAAATTAAGATTCATGACTTTTTGCGATTTTTGGTTCATCCTAATGAAAATTTGGTGTTTGTGGTATGTATCACTCCAAAGAATCTATTGGGATTAGGTATGTAAAATTAAGAATATTTGTTTCTTTATTTATTGGGATTAGGTCGGTGACTTTCGAAATTACAGAGTGCTCGAAGAAGAGATTGATCAATATGTCAAAGGTAATAAATTTTTGGAACAACAATTCAATTAGATAATGTATTAAAAAAAGAATGAACTGTTTTTTTTTTTTTTTTTTGTAGTTTCGGACCCCGGGACACCTACAAATCTGTGTGTCCGATTCATTTGTCAAGAATGTCAACGAAGATGGAATCTTATATAAGGTTAAGAGTATCTCTAAACGAATGTCTCATGCTTAATGTCTTAGCTTGGATTTAACTTCTCAATAATTATCAAACGATGAACATTTCATCGTATGGTTTTCGAGTTAAATTTGTTAATGCACATTTTCTCA TGATTATTGGGTTTCTAAATCTTTTCATTTATCCATTTTTAAACATGATTATTATAAGTCAATTATAATTATCTTTTATTTTCTTCCTTTGTTCTTCAGGCTATCCCTCCCATGAATGACAACCCAGTAGAACATTTGGATTCTACTTACAGACATGTAGTGGATGTGATTTTTACGAGCCTTTTGAATTTTTTAGGCAGATTAGGCGGTCTCTATATTAATCTAGGGGGTCAAGGCTATCTTCAAATTTATTCTCCTCGAGCCTTTTGGGATGTTGATTCATTTCGAGAAATGTTGCGTGAGGTGCTTAGTGATCAGCATAGGGTTCTGCAAGAGAATGATGCAATTATTTGGCATAATACAAATTTGCAGTCTTTGTTTAGTCTCATCCCTCAAGAGCGTCGAGTAATAGGGTGCTTGCTAGAGGATCAGTATGGAAATAAACAAGAAATTAAGATTCATGACTTTTTGCGATTTTTGGTTCATCCTAATGAAAATTTGGTGTTTGTGGTCGGTGACTTTCGAAATTACAGAGTGCTCGAAGAAGAGATTGATCAATATGTCAAAGTTTCGGACCCCGGGACACCTACAAATCTGTGTGTCCGATTCATTTGTCAAGAATGTCAACGAAGATGGAATCTTATATAAGGTTAAGAGTATCTCTAAACGAATGTCTCATGCTTAATGTCTTAGCTTGGATTTAACTTCTCAATAATTATCAAACGATGAACATTTCATCGTATGGTTTTCGAGTTAAATTTGTTAATGCACATTTTCTCA ATGAATGACAACCCAGTAGAACATTTGGATTCTACTTACAGACATGTAGTGGATGTGATTTTTACGAGCCTTTTGAATTTTTTAGGCAGATTAGGCGGTCTCTATATTAATCTAGGGGGTCAAGGCTATCTTCAAATTTATTCTCCTCGAGCCTTTTGGGATGTTGATTCATTTCGAGAAATGTTGCGTGAGGTGCTTAGTGATCAGCATAGGGTTCTGCAAGAGAATGATGCAATTATTTGGCATAATACAAATTTGCAGTCTTTGTTTAGTCTCATCCCTCAAGAGCGTCGAGTAATAGGGTGCTTGCTAGAGGATCAGTATGGAAATAAACAAGAAATTAAGATTCATGACTTTTTGCGATTTTTGGTTCATCCTAATGAAAATTTGGTGTTTGTGGTCGGTGACTTTCGAAATTACAGAGTGCTCGAAGAAGAGATTGATCAATATGTCAAAGTTTCGGACCCCGGGACACCTACAAATCTGTGTGTCCGATTCATTTGTCAAGAATGTCAACGAAGATGGAATCTTATATAA MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI Homology
BLAST of CmaCh04G009880 vs. ExPASy TrEMBL
Match: A0A6J1JNI2 (uncharacterized protein LOC111486913 OS=Cucurbita maxima OX=3661 GN=LOC111486913 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 9.1e-101 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of CmaCh04G009880 vs. ExPASy TrEMBL
Match: A0A6J1FQ78 (uncharacterized protein LOC111447242 OS=Cucurbita moschata OX=3662 GN=LOC111447242 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98 Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of CmaCh04G009880 vs. ExPASy TrEMBL
Match: A0A0A0KJD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G056070 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35 Identity = 76/89 (85.39%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of CmaCh04G009880 vs. ExPASy TrEMBL
Match: A0A2P5AQ36 (Ribosomal biogenesis, methyltransferase, EMG1/NEP OS=Parasponia andersonii OX=3476 GN=PanWU01x14_311050 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 6.5e-06 Identity = 47/181 (25.97%), Postives = 78/181 (43.09%), Query Frame = 0
BLAST of CmaCh04G009880 vs. ExPASy TrEMBL
Match: A0A2P5ETQ5 (Ribosomal biogenesis, methyltransferase, EMG1/NEP OS=Trema orientale OX=63057 GN=TorRG33x02_152690 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 6.5e-06 Identity = 46/181 (25.41%), Postives = 77/181 (42.54%), Query Frame = 0
BLAST of CmaCh04G009880 vs. NCBI nr
Match: XP_022989850.1 (uncharacterized protein LOC111486913 [Cucurbita maxima]) HSP 1 Score: 375.9 bits (964), Expect = 1.9e-100 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of CmaCh04G009880 vs. NCBI nr
Match: KAG6600811.1 (hypothetical protein SDJN03_06044, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 370.2 bits (949), Expect = 1.0e-98 Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of CmaCh04G009880 vs. NCBI nr
Match: XP_022942054.1 (uncharacterized protein LOC111447242 [Cucurbita moschata]) HSP 1 Score: 367.9 bits (943), Expect = 5.1e-98 Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of CmaCh04G009880 vs. NCBI nr
Match: KAG7031448.1 (hypothetical protein SDJN02_05488 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.3 bits (469), Expect = 4.7e-43 Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of CmaCh04G009880 vs. NCBI nr
Match: XP_020208144.1 (uncharacterized protein LOC109793088 [Cajanus cajan]) HSP 1 Score: 79.0 bits (193), Expect = 4.7e-11 Identity = 50/174 (28.74%), Postives = 84/174 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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