CmaCh04G009560 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G009560
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description1-acyl-sn-glycerol-3-phosphate acyltransferase
LocationCma_Chr04: 4904371 .. 4906970 (-)
RNA-Seq ExpressionCmaCh04G009560
SyntenyCmaCh04G009560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAATTGATACTTTCTGGCTGCAAAGCCCTGGGGGCGATCTTCATTATTCTGTAAGTCCTATTCTTCTTTCTGCCGTAGATTCCAATTTTTTAATAGCATAAATCAGTGTAGTAGGAGATGCAGAGGATAATACGTTTGGCATAAGCGATTGCCTTGCATTTGATTTATATCATTTTACTTCTTATTTGGTTGTTGATGTGAAATGACATTGTCTGCTCTTCTTAAGTCTGGTTTTTCCCTTTAAAATAATATATACACTAATATCGGTTGTTTTCATCGTTGTTATTTGCTTGTTAAACCTTTGAACCATTTATTGTGTTGTAGCATCGGTATGAAGCCACCGTTTAGGTTGTTTTGAGGTCTCCTTGTAATCCTAGAAATGATTGTTTAGGTTTACTACGGTCAGTGACAATTTTTTTTATAGGAAACATGAAACCATTCATTGATCTAGGCAGTAGATACAAAAGTAAGTCCGCTCTGAGATAGTTACAAGAAAGGCCTCCATTGAGACGAGAGTCCATAAGCCTTAATTACAGAAAGGAGATAAAATACTCCAAGATAAAGCTAGATAATTAGACTAAAGGAAGGAGTGTGTGGCAAAGCTTCATGCTTGTGTAAATGCTGAAAGTCCTTTTTCACCCGGTCTAATAGCAATGAACTCGGAATGATACTAGAAAAAATGATTCAAAGAATCTTGATAGTAGTTCCATGAACAATTCTCTGTAGAATCTGATGAAATAGGGTGAATTGAGATGAACAATTCTCCGTGGAATCTGATGAAATAAGGTGAATTGAGAGATGAACAATTCCCTGTGGAACTTGATGAAATAGGGTAAATTGAGATGGTATTTTGTAAACACGTAATTATCTTGAATATATTAACTATTTCTTTATTTTCCGATCGCCTAGGAGGGACAAAAGAAACATATGGTTCTTTTTTCAACAATTTTTTATTTTTAGAGAACCTCTCAATAGGATTCGAATCCATAGGGCGCACACAAAGTCGAATATATCTACAATATAAATATTAGTTTTGTTTAAGTTTTTAGGTTCTTGAATTATTTATCTAAATTGAATGTCTTAGGAACTTCTTCCGTTCCCTTAAAGGGGTGATCCGCACATGATCTTATAAAATTATTTATAGCATTTTTCTTTTGATGCATTTTGAATTGTCAAATTTTGATTTTCTTAGTAACGGCTCCCATCTATATATTTAAATTTGTGAACATATCTCTTTAATTATTGTAATTTATTTGAATGCATCTATTTGTACCAATATATATATATATTCAGATCTAAAAAGTATGATATGATATGATAATTGAAATGTTAAAGTTGAGATGATGAGGAAGGCTCAATTCAAAGCATGAACAAAAGAAAATACAAATCCTACTTAAATATAGAGAATTAAAAATAATTGAATTCAATATCAAGAGTTTAAAATAATTTAGGTCAAGGGAAAATAAACAAAAAAATAAAATAGGTGAACCAATCGTTCTTGCTAGTTATATGAATGCCACGCGGACAGTGTAGATTAAAAAAGCTGGCCTACCAGAGAAGTTTCCAGATCCCACATTTTTTCAATGGAGATCTCCTGCATCTAATTAATTTATTTGTTTTTTCTTTCATTTTGCTATTATTTTCAATCCAATGTATGAGTAAATTCCAGTAGGTGGGGGAAAATGAGAAATCAAACATTATTATAAACTAGCTCAATAATTTCATTTAATAAATTTGACGGTAGGGGTGTGCAGAAATCGAGGCTCATCAAGCTAAGCTAATTGGTTTAATTCATATAGATCAATGATACGATGTTATTCACTTTGAACACAATTTTTTTAGACTGTTTAAGCGGGATGAAATTTAGTGTAAAATTGAAGAATGTGGGAAAAAAAAATTATGAGGAAAGGAAAATGATGAGAGAGAAAGAGAATGAGACATTCAAGTCAAAACATGTACAAGTCTTAACTACATTTCACAAATGGTCACTCATTCTTATCTATTTTTCTCTGTTTTCAATATTTGACAAAAAAAAATGAAATTTTAAATTTAAGAAAAGAACCATTTTTTATTACGAAGTTTCTTAGAATAAGGAAAGGAAAAGAAAGTTCTTCAAAAGCACTCCCAACTGGTAAGTAAAGTGCTTAAAAGTGCTGTTTGGTGAAAGGGAATGAGTTTCTCAATGAACTAACAATTTGTTGGTTCTTTTTTTAAGTAATCACTCTGAGTTTGGTGTTCTTCACTGTACAATTCATCCAGATAACAATCTGATATCATCCAAAGCTGCAGGGGGTATTGGCATAAACAAGATGGAGATGGAGAATCTTGGAGGTTCTTGTTTGAGGAGTACAAGGTTAGAGAGGTGGTTCGCTACAAGATATGAGCCAAATAAGAAAGAAGCCCCAAAATGTTCAGTTGATGAACAGATATCAAAAAAGGAGAAGGGTGATGATATATATGTGGATGATAATGGGTGGAGTTCTGTTCTGATATCATGTTTCAGAATTATCACCTGCTTTCTCACAATGATGGTTACTACTTTGTTTTGGGCTGATTATGCTTCTGCTCCTGCCATGGCCTTACCACAGGAATAG

mRNA sequence

ATGGAAAAATTGATACTTTCTGGCTGCAAAGCCCTGGGGGCGATCTTCATTATTCTCATCGGTATGAAGCCACCGTTTAGTGTAAAATTGAAGAATGTGGGAAAAAAAAATTATGAGGAAAGGAAAATGATGAGAGAGAAAGAGAATGAGACATTCAAGTCAAAACATAATAAGGAAAGGAAAAGAAAGTTCTTCAAAAGCACTCCCAACTGTAATCACTCTGAGTTTGGTGTTCTTCACTGTACAATTCATCCAGATAACAATCTGATATCATCCAAAGCTGCAGGGGGTATTGGCATAAACAAGATGGAGATGGAGAATCTTGGAGGTTCTTGTTTGAGGAGTACAAGGTTAGAGAGGTGGTTCGCTACAAGATATGAGCCAAATAAGAAAGAAGCCCCAAAATGTTCAGTTGATGAACAGATATCAAAAAAGGAGAAGGGTGATGATATATATGTGGATGATAATGGGTGGAGTTCTGTTCTGATATCATGTTTCAGAATTATCACCTGCTTTCTCACAATGATGGTTACTACTTTGTTTTGGGCTGATTATGCTTCTGCTCCTGCCATGGCCTTACCACAGGAATAG

Coding sequence (CDS)

ATGGAAAAATTGATACTTTCTGGCTGCAAAGCCCTGGGGGCGATCTTCATTATTCTCATCGGTATGAAGCCACCGTTTAGTGTAAAATTGAAGAATGTGGGAAAAAAAAATTATGAGGAAAGGAAAATGATGAGAGAGAAAGAGAATGAGACATTCAAGTCAAAACATAATAAGGAAAGGAAAAGAAAGTTCTTCAAAAGCACTCCCAACTGTAATCACTCTGAGTTTGGTGTTCTTCACTGTACAATTCATCCAGATAACAATCTGATATCATCCAAAGCTGCAGGGGGTATTGGCATAAACAAGATGGAGATGGAGAATCTTGGAGGTTCTTGTTTGAGGAGTACAAGGTTAGAGAGGTGGTTCGCTACAAGATATGAGCCAAATAAGAAAGAAGCCCCAAAATGTTCAGTTGATGAACAGATATCAAAAAAGGAGAAGGGTGATGATATATATGTGGATGATAATGGGTGGAGTTCTGTTCTGATATCATGTTTCAGAATTATCACCTGCTTTCTCACAATGATGGTTACTACTTTGTTTTGGGCTGATTATGCTTCTGCTCCTGCCATGGCCTTACCACAGGAATAG

Protein sequence

MEKLILSGCKALGAIFIILIGMKPPFSVKLKNVGKKNYEERKMMREKENETFKSKHNKERKRKFFKSTPNCNHSEFGVLHCTIHPDNNLISSKAAGGIGINKMEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLISCFRIITCFLTMMVTTLFWADYASAPAMALPQE
Homology
[Close]
BLAST of CmaCh04G009560 vs. ExPASy TrEMBL
Match: A0A6J1ILL6 (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111476710 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.2e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 103 MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL 162
           MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL
Sbjct: 1   MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL 60

Query: 163 ISCFRIITCFLTMMVTTLFW 183
           ISCFRIITCFLTMMVTTLFW
Sbjct: 61  ISCFRIITCFLTMMVTTLFW 80

[Close]
BLAST of CmaCh04G009560 vs. ExPASy TrEMBL
Match: A0A6J1FRR0 (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111447575 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 103 MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL 162
           MEMENLGGSCLRS RLERWF  RYEPNKKEAPKCSVDEQISKKE GDDIYVDDNGWSSVL
Sbjct: 1   MEMENLGGSCLRSRRLERWFDARYEPNKKEAPKCSVDEQISKKENGDDIYVDDNGWSSVL 60

Query: 163 ISCFRIITCFLTMMVTTLFWA 184
           ISCFRIITCFLTMMVTT FWA
Sbjct: 61  ISCFRIITCFLTMMVTTFFWA 81

[Close]
BLAST of CmaCh04G009560 vs. ExPASy TrEMBL
Match: A0A0A0L6B4 (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G077660 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.0e-21
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 105 MENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLIS 164
           MEN G + LRS RLE +F T  EPNK+E PK SVDEQI K+EK  DIY+DDNGWSSVLIS
Sbjct: 1   MENFGAASLRSRRLESYFNTSSEPNKREVPKYSVDEQIPKREK-TDIYLDDNGWSSVLIS 60

Query: 165 CFRIITCFLTMMVTTLFWA 184
           CFR + CFLTMMVTT  WA
Sbjct: 61  CFRTVFCFLTMMVTTFVWA 78

[Close]
BLAST of CmaCh04G009560 vs. ExPASy TrEMBL
Match: A0A6J1DBN2 (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Momordica charantia OX=3673 GN=LOC111019003 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.0e-21
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = 0 

Query: 105 MENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLIS 164
           M+NLG + LRS RLE  F T YEP K+E PKCSVDEQ  ++ +  D YVDDNGWSSVLIS
Sbjct: 1   MDNLGAASLRSRRLESCFNTSYEPIKRETPKCSVDEQQIRRMERADFYVDDNGWSSVLIS 60

Query: 165 CFRIITCFLTMMVTTLFWA 184
           CFRI+TCFL MMVTT  WA
Sbjct: 61  CFRIVTCFLAMMVTTSIWA 79

[Close]
BLAST of CmaCh04G009560 vs. ExPASy TrEMBL
Match: A0A1S3CJ60 (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis melo OX=3656 GN=LOC103501589 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 8.7e-20
Identity = 55/79 (69.62%), Postives = 60/79 (75.95%), Query Frame = 0 

Query: 105 MENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLIS 164
           MEN G + LRS RLE +  T  EP K+E PK SVDEQI K EK  DIYVDDNGWSSVL+S
Sbjct: 1   MENFGAASLRSRRLESYINTSSEPIKREVPKYSVDEQIPKSEK-TDIYVDDNGWSSVLVS 60

Query: 165 CFRIITCFLTMMVTTLFWA 184
           CFRI+ CFLTMMVTT  WA
Sbjct: 61  CFRIVFCFLTMMVTTFVWA 78

[Close]
BLAST of CmaCh04G009560 vs. NCBI nr
Match: KAG7031415.1 (hypothetical protein SDJN02_05455, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-39
Identity = 83/89 (93.26%), Postives = 84/89 (94.38%), Query Frame = 0 

Query: 95  AGGIGINKMEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVD 154
           +GGIGINKMEMENLGGSCLRS RLERWF  RYEPNKKEAPKCSVDEQISKKE GDDIYVD
Sbjct: 14  SGGIGINKMEMENLGGSCLRSRRLERWFDARYEPNKKEAPKCSVDEQISKKENGDDIYVD 73

Query: 155 DNGWSSVLISCFRIITCFLTMMVTTLFWA 184
           DNGWSSVLISCFRIITCFLTMMVTT FWA
Sbjct: 74  DNGWSSVLISCFRIITCFLTMMVTTFFWA 102

[Close]
BLAST of CmaCh04G009560 vs. NCBI nr
Match: XP_022976268.1 (LOW QUALITY PROTEIN: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucurbita maxima])

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 103 MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL 162
           MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL
Sbjct: 1   MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL 60

Query: 163 ISCFRIITCFLTMMVTTLFW 183
           ISCFRIITCFLTMMVTTLFW
Sbjct: 61  ISCFRIITCFLTMMVTTLFW 80

[Close]
BLAST of CmaCh04G009560 vs. NCBI nr
Match: XP_022942579.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucurbita moschata])

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-35
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 103 MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL 162
           MEMENLGGSCLRS RLERWF  RYEPNKKEAPKCSVDEQISKKE GDDIYVDDNGWSSVL
Sbjct: 1   MEMENLGGSCLRSRRLERWFDARYEPNKKEAPKCSVDEQISKKENGDDIYVDDNGWSSVL 60

Query: 163 ISCFRIITCFLTMMVTTLFWA 184
           ISCFRIITCFLTMMVTT FWA
Sbjct: 61  ISCFRIITCFLTMMVTTFFWA 81

[Close]
BLAST of CmaCh04G009560 vs. NCBI nr
Match: KAG6600778.1 (hypothetical protein SDJN03_06011, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-35
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 103 MEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVL 162
           MEMENLGGSCLRS RLERWF  RYEPNKKEAPKCSVDEQISKKE GDDIYVDDNGWSSVL
Sbjct: 1   MEMENLGGSCLRSRRLERWFDARYEPNKKEAPKCSVDEQISKKENGDDIYVDDNGWSSVL 60

Query: 163 ISCFRIITCFLTMMVTTLFWA 184
           ISCFRIITCFLTMMVTT FWA
Sbjct: 61  ISCFRIITCFLTMMVTTFFWA 81

[Close]
BLAST of CmaCh04G009560 vs. NCBI nr
Match: XP_038903661.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Benincasa hispida] >XP_038903662.1 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Benincasa hispida])

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-21
Identity = 58/79 (73.42%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 105 MENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLIS 164
           MENLG + LRS R E  F T YEPNK+EA K S DEQI K+EK  DIYVDDNGWSSVLIS
Sbjct: 1   MENLGAASLRSRRFESCFNTSYEPNKREASKYSADEQIPKREK-TDIYVDDNGWSSVLIS 60

Query: 165 CFRIITCFLTMMVTTLFWA 184
           CFRI+ CFLTMMVTT  WA
Sbjct: 61  CFRIVFCFLTMMVTTFIWA 78

The following BLAST results are available for this feature:
BLAST of CmaCh04G009560 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G009560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ILL63.2e-38100.001-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FRR01.1e-3593.831-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita moschata OX=3662 GN=... [more]
A0A0A0L6B46.0e-2170.891-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A6J1DBN26.0e-2168.351-acyl-sn-glycerol-3-phosphate acyltransferase OS=Momordica charantia OX=3673 GN... [more]
A0A1S3CJ608.7e-2069.621-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis melo OX=3656 GN=LOC103... [more]
BLAST of CmaCh04G009560 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7031415.11.2e-3993.26hypothetical protein SDJN02_05455, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022976268.16.5e-38100.00LOW QUALITY PROTEIN: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucurb... [more]
XP_022942579.12.3e-3593.831-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucurbita moschata][more]
KAG6600778.12.3e-3593.83hypothetical protein SDJN03_06011, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038903661.12.5e-2173.421-acyl-sn-glycerol-3-phosphate acyltransferase-like [Benincasa hispida] >XP_0389... [more]
BLAST of CmaCh04G009560 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G009560.1CmaCh04G009560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006654 phosphatidic acid biosynthetic process
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity