CmaCh04G009500 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G009500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	fatty acid desaturase 4, chloroplastic
Location	Cma_Chr04: 4877126 .. 4878082 (+)
RNA-Seq Expression	CmaCh04G009500
Synteny	CmaCh04G009500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGGTTCCACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCGAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTTCACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAATTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCAGTTAATGACCCTATTCTACATGGTTTCGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCTTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAAGGTTTTTGAGGCGTTGGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCTGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCGTATTAA

mRNA sequence

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGGTTCCACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCGAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTTCACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAATTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCAGTTAATGACCCTATTCTACATGGTTTCGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCTTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAAGGTTTTTGAGGCGTTGGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCTGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCGTATTAA

Coding sequence (CDS)

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGGTTCCACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCGAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTTCACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAATTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCAGTTAATGACCCTATTCTACATGGTTTCGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCTTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAAGGTTTTTGAGGCGTTGGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCTGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCGTATTAA

Protein sequence

MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEIIEQTTAY

Homology

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BLAST of CmaCh04G009500 vs. ExPASy Swiss-Prot
Match: Q9SZ42 (Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4 PE=1 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.4e-104
Identity = 180/290 (62.07%), Postives = 219/290 (75.52%), Query Frame = 0


Query: 25  PRKFVCCIANTTVNVAAA---TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLN 84
           P +    +   TVN+  +   +  + KP+    +LV+E+   SP             + N
Sbjct: 41  PNREKLLVEQRTVNLPLSNDQSLQSTKPRPNREKLVVEQRLASP------------PLSN 100

Query: 85  DPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYH 144
           DP+L+STW+HR+WV +GCT + +SLAKS+ G   SH  LEPALA   GYILADLGSGVYH
Sbjct: 101 DPTLKSTWTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYH 160

Query: 145 WGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAVND 204
           W IDNYGD STP+ GTQIEAFQGHHK PWTIT+RQFANNL+ALA+ +TFTVLP+ LA ND
Sbjct: 161 WAIDNYGDESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFND 220

Query: 205 PILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNN 264
           P+ HGFV   + CI+FSQQFHAWAH  KS+LPPLVVA+QD GLLVSR QH+ HHR PYNN
Sbjct: 221 PVFHGFVCTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNN 280

Query: 265 NYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEI 312
           NYCIVSG WN +LDE+KVFEALEM+ +F+LGVRPRSW+EP+S+W EETEI
Sbjct: 281 NYCIVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]

BLAST of CmaCh04G009500 vs. ExPASy Swiss-Prot
Match: O04584 (Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4L1 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.1e-97
Identity = 168/287 (58.54%), Postives = 207/287 (72.13%), Query Frame = 0


Query: 24  VPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDP 83
           +PR +      T V V  + T    P+     LV+E+  ++P  P+  N        NDP
Sbjct: 17  IPRSY----GPTRVRVTCSVT-TTNPQLNHENLVVEKRLVNP--PLSKN--------NDP 76

Query: 84  SLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWG 143
           +LQSTW+HR+WV +G T +  S AKSI G   SH WL+PALA   GY+ ADLGSGVYHW 
Sbjct: 77  TLQSTWTHRLWVAAGSTTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWA 136

Query: 144 IDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAVNDPI 203
           IDNYG ASTPI G Q+EA QGHHK PWTITKRQFANN Y +ARA+TF VLP+ LA+N+P+
Sbjct: 137 IDNYGGASTPIVGAQLEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPL 196

Query: 204 LHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNY 263
            H FV+  + CI+ SQQFHAWAH  KS+LPPLV+A+QD GLLVSR  H  HH+ PYN+NY
Sbjct: 197 FHSFVSTFAFCILLSQQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNY 256

Query: 264 CIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETE 311
           C+VSG WNK+LDE+ +F+ALEM LFF+ GVRP SW EP+S+WTEETE
Sbjct: 257 CVVSGAWNKVLDESNLFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]

BLAST of CmaCh04G009500 vs. ExPASy Swiss-Prot
Match: O81006 (Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4L2 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.6e-92
Identity = 155/262 (59.16%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 43  TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIV 102
           +T  ++P H + +LV+E+  ++P             + NDP+LQSTW+HR+WV +GCT V
Sbjct: 31  STTNSQPNH-EMKLVVEQRLVNP------------PLSNDPTLQSTWTHRLWVAAGCTTV 90

Query: 103 LISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAF 162
            +S +KSI GA  SH WLEP+LA   GYILADLGSGVYHW  DNYGD STP+ G  IE  
Sbjct: 91  FVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVYHWATDNYGDESTPLVGIHIEDS 150

Query: 163 QGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFH 222
           Q HHK PWTITKRQFANNL+ +AR  T  VLP+ LA +D ++HGFV++ + C++F Q FH
Sbjct: 151 QDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVVHGFVSMFAFCVLFCQLFH 210

Query: 223 AWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEA 282
           AWAH  KS+LPPLVV +QD GLLVSR+ H  HHR PYNNNYC+VSG+WNK+LDE+ VF+A
Sbjct: 211 AWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYNNNYCVVSGVWNKVLDESNVFKA 270

Query: 283 LEMILFFKLGVRPRSWTEPHSE 305
           +EM+L+ +LGVRPRSWTEP+ E
Sbjct: 271 MEMVLYIQLGVRPRSWTEPNYE 279

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BLAST of CmaCh04G009500 vs. ExPASy Swiss-Prot
Match: Q9AE87 (Plasmanylethanolamine desaturase OS=Myxococcus xanthus OX=34 GN=carF PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-17
Identity = 62/199 (31.16%), Postives = 88/199 (44.22%), Query Frame = 0


Query: 104 ISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFG-TQIEAF 163
           ++L   + G   + TWL  + A L+GY+ AD  SG  HW  D +G    P+ G   I  F
Sbjct: 42  VALVYRLWGTPYAGTWLLLS-AVLLGYLAADFVSGFVHWMGDTWGSTEMPVLGKALIRPF 101

Query: 164 QGHHKRPWTITKRQFA-----NNLYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMF 223
           + HH     IT+  F      N L +L  A+    LP++          F+      +M 
Sbjct: 102 REHHVDEKAITRHDFVETNGNNCLISLPVAIIALCLPMS-GPGWVFCASFLGAMIFWVMA 161

Query: 224 SQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDET 283
           + QFH W+H      P LV  +Q   L++    H  HH  PYN  YCI  G  NK L   
Sbjct: 162 TNQFHKWSH--MDSPPALVGFLQRVHLILPPDHHRIHHTKPYNKYYCITVGWMNKPLTMV 221

Query: 284 KVFEALEMILFFKLGVRPR 297
             F   E ++ +  G+ PR
Sbjct: 222 HFFPTAERLITWATGLLPR 236

[Close]

BLAST of CmaCh04G009500 vs. ExPASy Swiss-Prot
Match: Q5UR78 (Probable fatty acid desaturase MIMI_L630 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L630 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.7e-12
Identity = 48/181 (26.52%), Postives = 81/181 (44.75%), Query Frame = 0


Query: 118 TWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFG-TQIEAFQGHHKRPWTITKRQ 177
           T ++  +  ++GY+L+D   G+YHW  D Y    TPI G T I   + HH RP  + +  
Sbjct: 4   TIIDKFIQIVLGYLLSDFIMGIYHWIKDTYFSPFTPIIGKTFIWGSRLHHVRPRYVLEFT 63

Query: 178 FANNLYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLV 237
             + +   A+     + P+        L  F+      I  +   H + H+   + P   
Sbjct: 64  DKDLIIDSAKWTLSWIGPLFFWFG---LTPFLVTMFIMISLNDVIHKYTHEIDHERPMWA 123

Query: 238 VAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPR 297
             +Q  G   S  +H  HH  P+  NYC V+   N  L++  ++  LE  + +  GV+PR
Sbjct: 124 TILQRIGFFQSHDEHHLHHIAPHEINYCPVTPYVNIWLEKINLWRKLESFVEYLTGVKPR 181

[Close]

BLAST of CmaCh04G009500 vs. ExPASy TrEMBL
Match: A0A6J1IGF1 (fatty acid desaturase 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476701 PE=3 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 6.9e-184
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

[Close]

BLAST of CmaCh04G009500 vs. ExPASy TrEMBL
Match: A0A6J1FQY8 (fatty acid desaturase 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447974 PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 5.4e-181
Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPA+ RKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAAS+HTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGD STPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDPSTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLA NDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDET+VFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

[Close]

BLAST of CmaCh04G009500 vs. ExPASy TrEMBL
Match: A0A0A0L6B9 (TMEM189_B_dmain domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077710 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.5e-151
Identity = 263/318 (82.70%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S  +PR+ V CIANTTVN       A  PKH DGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVVYCIANTTVN-----GVATSPKHADGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           E +SPT     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAASSH WL
Sbjct: 61  EVISPTPLTFVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LA++DPILHGFV +CSGCIMFSQQFHAWAH KKS+LPPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAIDDPILHGFVGMCSGCIMFSQQFHAWAHSKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           +AGLLVSR QHS HHRPPYNNNYCIVSGIWNKLLDETK+FEALEMIL+FKLG+RPRSWTE
Sbjct: 241 NAGLLVSRTQHSTHHRPPYNNNYCIVSGIWNKLLDETKLFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of CmaCh04G009500 vs. ExPASy TrEMBL
Match: A0A6J1DD70 (fatty acid desaturase 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019014 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.2e-149
Identity = 264/317 (83.28%), Postives = 281/317 (88.64%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS+T V+  SP +PRK V C+AN TV+VAAA     KPKH DGQLVI+R
Sbjct: 1   MSILAQNKFLLSSRTRVNPLSPPIPRKIVYCVAN-TVDVAAAGATTTKPKHADGQLVIKR 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           E +SP    L  +STY+ VLNDPSL+STW HR WV SGCT VLISLAKSI GAASSH WL
Sbjct: 61  EFVSPPL-TLGKASTYHYVLNDPSLRSTWGHRAWVASGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EP LAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPTLAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLPI LA  DPILHGFV+VCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFVVLPINLAFGDPILHGFVSVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSR+QHSAHHRPPYNNNYCIVSGIWN+LLDETKVFEA EMILFFKLGVRPRSW+E
Sbjct: 241 DAGLLVSRMQHSAHHRPPYNNNYCIVSGIWNQLLDETKVFEAFEMILFFKLGVRPRSWSE 300

Query: 301 PHSEWTEETEIIEQTTA 318
           P++EWTEETE +EQTTA
Sbjct: 301 PNTEWTEETETVEQTTA 315

[Close]

BLAST of CmaCh04G009500 vs. ExPASy TrEMBL
Match: A0A5A7SXQ7 (Fatty acid desaturase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00380 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.3e-147
Identity = 259/318 (81.45%), Postives = 280/318 (88.05%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S   PR+ V CIANTTVN  A ++     KHGDGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPTPRRVVYCIANTTVNGVATSS-----KHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           E +SP+     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAASS  WL
Sbjct: 61  EVISPSPLTSVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSRIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYG ASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGGASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LA +DP LHGFV VCSGCIMFSQQFHAWAH KKS++PPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAFDDPTLHGFVGVCSGCIMFSQQFHAWAHGKKSEIPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSR QH+ HHRPPYNNNYCIVSGIWN+LLDETKVFEALEMIL+FKLG+RPRSWTE
Sbjct: 241 DAGLLVSRTQHATHHRPPYNNNYCIVSGIWNQLLDETKVFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of CmaCh04G009500 vs. NCBI nr
Match: XP_022976256.1 (fatty acid desaturase 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 652.9 bits (1683), Expect = 1.4e-183
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

[Close]

BLAST of CmaCh04G009500 vs. NCBI nr
Match: XP_023515872.1 (fatty acid desaturase 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 647.9 bits (1670), Expect = 4.6e-182
Identity = 315/318 (99.06%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPA+PRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLA NDPILHG VAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

[Close]

BLAST of CmaCh04G009500 vs. NCBI nr
Match: KAG6600772.1 (Fatty acid desaturase 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031409.1 Fatty acid desaturase 4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 645.2 bits (1663), Expect = 3.0e-181
Identity = 313/318 (98.43%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPA+ RKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAAS+HTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLA NDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDET+VFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

[Close]

BLAST of CmaCh04G009500 vs. NCBI nr
Match: XP_022943161.1 (fatty acid desaturase 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 643.3 bits (1658), Expect = 1.1e-180
Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPA+ RKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAAS+HTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGD STPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDPSTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLA NDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDET+VFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

[Close]

BLAST of CmaCh04G009500 vs. NCBI nr
Match: XP_038905900.1 (fatty acid desaturase 4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 548.1 bits (1411), Expect = 4.9e-152
Identity = 266/318 (83.65%), Postives = 285/318 (89.62%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S  +PR+   CIAN+TVNVAA  T    PKH DGQL+IER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVFYCIANSTVNVAAGAT-TTNPKHADGQLLIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           E +SPT   L NSSTYYSVLNDPSL+STWSHR WV SGCT VL+SLAKSI GAASSH WL
Sbjct: 61  EVISPTPLTLVNSSTYYSVLNDPSLRSTWSHRAWVASGCTTVLVSLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYG+ STPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGNVSTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           +YALARAVTF VLP++LA +DPILHGFV VCSGCIMFSQQFHAWAH KKS+LPPLVVAMQ
Sbjct: 181 MYALARAVTFAVLPVSLAFDDPILHGFVGVCSGCIMFSQQFHAWAHGKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSR QHSAHHRPPYNNNYCIVSGIWNK+LDETKVFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRRQHSAHHRPPYNNNYCIVSGIWNKILDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+S WTEETEIIEQTTA+
Sbjct: 301 PNSAWTEETEIIEQTTAH 317

[Close]

BLAST of CmaCh04G009500 vs. TAIR 10
Match: AT4G27030.1 (fatty acid desaturase A )

HSP 1 Score: 380.9 bits (977), Expect = 9.7e-106
Identity = 180/290 (62.07%), Postives = 219/290 (75.52%), Query Frame = 0


Query: 25  PRKFVCCIANTTVNVAAA---TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLN 84
           P +    +   TVN+  +   +  + KP+    +LV+E+   SP             + N
Sbjct: 41  PNREKLLVEQRTVNLPLSNDQSLQSTKPRPNREKLVVEQRLASP------------PLSN 100

Query: 85  DPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYH 144
           DP+L+STW+HR+WV +GCT + +SLAKS+ G   SH  LEPALA   GYILADLGSGVYH
Sbjct: 101 DPTLKSTWTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYH 160

Query: 145 WGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAVND 204
           W IDNYGD STP+ GTQIEAFQGHHK PWTIT+RQFANNL+ALA+ +TFTVLP+ LA ND
Sbjct: 161 WAIDNYGDESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFND 220

Query: 205 PILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNN 264
           P+ HGFV   + CI+FSQQFHAWAH  KS+LPPLVVA+QD GLLVSR QH+ HHR PYNN
Sbjct: 221 PVFHGFVCTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNN 280

Query: 265 NYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEI 312
           NYCIVSG WN +LDE+KVFEALEM+ +F+LGVRPRSW+EP+S+W EETEI
Sbjct: 281 NYCIVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]

BLAST of CmaCh04G009500 vs. TAIR 10
Match: AT1G62190.1 (Kua-ubiquitin conjugating enzyme hybrid localisation domain )

HSP 1 Score: 355.5 bits (911), Expect = 4.4e-98
Identity = 168/287 (58.54%), Postives = 207/287 (72.13%), Query Frame = 0


Query: 24  VPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDP 83
           +PR +      T V V  + T    P+     LV+E+  ++P  P+  N        NDP
Sbjct: 17  IPRSY----GPTRVRVTCSVT-TTNPQLNHENLVVEKRLVNP--PLSKN--------NDP 76

Query: 84  SLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWG 143
           +LQSTW+HR+WV +G T +  S AKSI G   SH WL+PALA   GY+ ADLGSGVYHW 
Sbjct: 77  TLQSTWTHRLWVAAGSTTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWA 136

Query: 144 IDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAVNDPI 203
           IDNYG ASTPI G Q+EA QGHHK PWTITKRQFANN Y +ARA+TF VLP+ LA+N+P+
Sbjct: 137 IDNYGGASTPIVGAQLEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPL 196

Query: 204 LHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNY 263
            H FV+  + CI+ SQQFHAWAH  KS+LPPLV+A+QD GLLVSR  H  HH+ PYN+NY
Sbjct: 197 FHSFVSTFAFCILLSQQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNY 256

Query: 264 CIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETE 311
           C+VSG WNK+LDE+ +F+ALEM LFF+ GVRP SW EP+S+WTEETE
Sbjct: 257 CVVSGAWNKVLDESNLFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]

BLAST of CmaCh04G009500 vs. TAIR 10
Match: AT2G22890.1 (Kua-ubiquitin conjugating enzyme hybrid localisation domain )

HSP 1 Score: 339.3 bits (869), Expect = 3.2e-93
Identity = 155/262 (59.16%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 43  TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIV 102
           +T  ++P H + +LV+E+  ++P             + NDP+LQSTW+HR+WV +GCT V
Sbjct: 31  STTNSQPNH-EMKLVVEQRLVNP------------PLSNDPTLQSTWTHRLWVAAGCTTV 90

Query: 103 LISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAF 162
            +S +KSI GA  SH WLEP+LA   GYILADLGSGVYHW  DNYGD STP+ G  IE  
Sbjct: 91  FVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVYHWATDNYGDESTPLVGIHIEDS 150

Query: 163 QGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFH 222
           Q HHK PWTITKRQFANNL+ +AR  T  VLP+ LA +D ++HGFV++ + C++F Q FH
Sbjct: 151 QDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVVHGFVSMFAFCVLFCQLFH 210

Query: 223 AWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEA 282
           AWAH  KS+LPPLVV +QD GLLVSR+ H  HHR PYNNNYC+VSG+WNK+LDE+ VF+A
Sbjct: 211 AWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYNNNYCVVSGVWNKVLDESNVFKA 270

Query: 283 LEMILFFKLGVRPRSWTEPHSE 305
           +EM+L+ +LGVRPRSWTEP+ E
Sbjct: 271 MEMVLYIQLGVRPRSWTEPNYE 279

The following BLAST results are available for this feature:

BLAST of CmaCh04G009500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ42	1.4e-104	62.07	Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4 P...	[more]
O04584	6.1e-97	58.54	Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O81006	4.6e-92	59.16	Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9AE87	1.7e-17	31.16	Plasmanylethanolamine desaturase OS=Myxococcus xanthus OX=34 GN=carF PE=1 SV=1	[more]
Q5UR78	2.7e-12	26.52	Probable fatty acid desaturase MIMI_L630 OS=Acanthamoeba polyphaga mimivirus OX=...	[more]

BLAST of CmaCh04G009500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IGF1	6.9e-184	100.00	fatty acid desaturase 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114767...	[more]
A0A6J1FQY8	5.4e-181	98.11	fatty acid desaturase 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A0A0L6B9	4.5e-151	82.70	TMEM189_B_dmain domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G07...	[more]
A0A6J1DD70	3.2e-149	83.28	fatty acid desaturase 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5A7SXQ7	2.3e-147	81.45	Fatty acid desaturase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh04G009500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976256.1	1.4e-183	100.00	fatty acid desaturase 4, chloroplastic [Cucurbita maxima]	[more]
XP_023515872.1	4.6e-182	99.06	fatty acid desaturase 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6600772.1	3.0e-181	98.43	Fatty acid desaturase 4, chloroplastic, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022943161.1	1.1e-180	98.11	fatty acid desaturase 4, chloroplastic [Cucurbita moschata]	[more]
XP_038905900.1	4.9e-152	83.65	fatty acid desaturase 4, chloroplastic-like [Benincasa hispida]	[more]

BLAST of CmaCh04G009500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27030.1	9.7e-106	62.07	fatty acid desaturase A	[more]
AT1G62190.1	4.4e-98	58.54	Kua-ubiquitin conjugating enzyme hybrid localisation domain	[more]
AT2G22890.1	3.2e-93	59.16	Kua-ubiquitin conjugating enzyme hybrid localisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019547	B domain of TMEM189, localisation domain	PFAM	PF10520	TMEM189_B_dmain	coord: 130..298 e-value: 9.7E-65 score: 217.9
None	No IPR available	PANTHER	PTHR48140	FAMILY NOT NAMED	coord: 1..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G009500.1	CmaCh04G009500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006631	fatty acid metabolic process
cellular_component	GO:0016021	integral component of membrane