CmaCh04G008930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G008930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	KH domain-containing protein
Location	Cma_Chr04: 4653087 .. 4657933 (-)
RNA-Seq Expression	CmaCh04G008930
Synteny	CmaCh04G008930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTGGTTTTAACTGACATCGGCATTCATTCATACAATCGACTTAGAGGTTAGATGTTCAGAAATAGCCTATGTCCGAAAACAAAAAAGCTATTATCTCTAGTTATTAGTCATTTATTATTATTATTATTTTAATTTTAGTTAAATGTTATGCGATGTGATGTATAAATTTTTAAATGCCTTTATTTTAAACCTTCAATTTTGTAGAGATTTTATATTAGATTGTTTATTTTTTTTTAAATGATGTAATAAAAACTAACATAAATACATCTTTTAGGTATTTATTTATAAACCCATTGAAATAACCTTGAAAGTCAATACAATTACCCTCTTATTTTAATATAACTACAACATCTTATTAAACCATAGAATTTAAACAAAGGAAAGATTAACTTTTAAGTTAATTATAAGTTTAGATACTATACTTTTAAAAATTAATGTTAATGCCTAATAAATTTAATACATACTCTATATTTTAAAAAATTAATTAATTATATGAGATATAAAATTGAATTTTATAATTGGTAGATGTCTATTAAGTTTACAAATTTTCAAAAGAATACTAAATAGAAACCATTTACATTGAAACAATATTTTTTAAAAATTAAAAGAAATTGTAATACACAAAATTATTTTAAAGTTAGAAAAAAAAACAAATAAACCCAAATATGGAAGATTTAAAAACAAAACCTATAATATTAAATAAGGAAGGAAACAAAGAAAAAGGTATTGTCAGATGGGGGCAGGAAGTAGGGTCCAGTTCCACGTGGGGATAGGGGTAAAATGGTAAAATAAGAAAAACAGTTCGGAGAGAGAGAAAAGAAAGGTAAGGATATTGGTTTTGGTAGAAAAAGACGCATCCAGTCTCCACCACACCACACCATATTGTCAAAAATCCCATTCCCCACTCCTTCCTTCCTTCCTTCCTCCATTGCCAATGCCACCACTGACCCATTGATTCCAACTACCACATACAAATCAAAACAAAACATATACTGTAAAATTAAGATTCACTCACACCACTACGCGATCTCCCTCTGGTTTTTGTTCTTCCTCCACAGGCCTTTTTCTTTTCTTCCCCTTCCCATTCAACCGACTTCCCCTGTATCTCTCTGCCCCAGATTCATCTTCTTCTTCCCTCTTTCTGCGAAGGTAGCCTCTTTCCCCATCTGGGTCGCTCTCTTTTTTGTTGCAAACGCTAATATCACTCTTCTTCTCGACTTGTTAACCCAACTCCACTTCTGGGTTTCTTCTGTTTTGTTTTCTAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTAATTTTTCTTCATCATTTTTTGCTTTTCTTTATCTACTGCTGATTCATTCTGATTCTTTCTTTGTTTGATTCATCATGTATAACGTCCTCTTTTAATTGTGTTGTGTTGTGTTGGTTTGATAATCTTTGTCTGTGCTACTCTGAGTATGGAGTTGTGTTTCTTTTGGACGTGATGTGTTGTATGTGATGGTGATTTTGTGTTGTGTGAAAATGGCAGGTATCTTGCTGAATTACTGTCAGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGGTGGGTTTTCATGATCTCTCTCTACTTTGCATTTTGACTATTGAAATATCTATTCTTATTTCTTATGCCGCTGACATTAGTGGAATCAATGGTATCTATCAAGTGGTATTAGAGCATCAATGTAGGCAATAACTTGTTGGATGAAAGAAAAGCTTAAGGCTCAGGTGGGTTTTCTATAGAAGAAAATTTAAGATGCTGAAAGGTGTTGGTGACAGGAATTCGTTGACTCAAAAGCAAGCAAGTTCAATAATGGTGAAGAAGATGCTAATCATGTTTGGTCAGGTAGAACAATTGTTGAAGGAGATATTGTCACTTGCTATTAGCGAAGCGAATCTTCAACGAGCAAAATGATGGAATTTGTCACTGTGACGGCCCAAACCTACTGCTAGCAAGATTTTTAAAACACGTATGCTATGGAGAGGTTTCCACACCTTATAAAGAATGTTTTGTTCTCCTCCCCAATCGATGTGGGATCTCACAATCCACCTCCCTTTGAGGCCCAACATTCCTGCTGACACTCGTTCCCTTCTCCAGTTGATGTGGGACACCCCAAGTTCACCAGTATGATGGAACATGTAGCATGGAGTAGTATAGTCTTTGCCATTCATAAGGTAGTTTAAGAGAGTAGCTTTGTGTTCGTTTGCGACCACCAGTTGTAAATAGAGGTTCGGTGGTGGCTGCGGGAGAGAGAGCTTTGTGGTTGTTTGGCTCGAGCTTGCTAAAAAATTCAAAATCCATTCTACCTCGAGGTACTTGAGATTATCTCCAAGAGTGTCATCTTCTCCATGTGGACGGAGGCAAAAATGTATTTTCCTACCTTACTCAGTCTTTGTCAACTCGTAATTAATCAGACCATAGTCGACTACAATCTTTTCTACGTCTTCGCCCATAAAAAATGATGTTAACGAACTTGGGATGATGCTATGCATCTAAGACATGTTCTTTACAGTTTTTTGGATCCTCTGCCCCACATGAATAGGCATGTGGTGATAATTTTCTATGAGTAACAAGCCAACTATCTGCAATTCGCCCGTAACCATCTTAAACACGAGTATTTCTTAAGTCAGTTGCATGAACACCCCTTAAGTTATTATCTATCGTTGCAGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTTGAGCACGGGAGCCCTTACAGGTCATTAGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGTAAATCTATAAATATCCTACTGGATTTAAATTTTTTCGTATATTTAAAGTCGATTGTCCTTGATCTATTTCTTTTTAGTTTTGCTAGTTACTCAATAGGAAGGTTTTCTCTTTAATCAGTGATTTCTTGGTATGAGAATACTTTTGAAAAATTGGAAAACCAAGTTTGACAATAGCCTACCTAGTTATTAAAATTTCATCTGGGCTTGAATCCTGAACTTTGTAGGGTATCTTCAGAGGTCCCTAGTCCTTACTACAGCGGTACTCGTTGGTTCTGACCCGAGCATTCTCGAAATAGAATTTGTAGTTCTTCGTATTTGTAATTTACACGTGTGGTTTAGTTATAAAATACTTCTACTGCAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATGTAAGTTCAAATATTTTTATGTTAGGTGGTGATTGTACTGACCTTTTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTCGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGTACTGAAAAAACTACTCGGTGTTTGTATTTTACTCTTTTATTTTTTATAGTTAATCTTGTCTAACGTGTGATATACATATTTTGTTGAACATAACTCTTTGTGGGAAACACTCGCACTTTTTATTAACACTAATCGAAAAGAGATTACAAAACACTTTGTAGAAAATATACAATGGGCTCATACAATTATTGGGTTTGACCCTACTGGACTAGTGATGATAGATGATATTTCAACATATTTTACTCGCTTTCTCTTATGAGTTCTCGCTCTCTCGTCTTTGAGATAACTGCTCGATTATAGATTTCGAGTAGTCAGCCTTTCTTTAATGTCTTTAATATATGTTCTGAATATGGATATGGGAGCATTTGATACTACTTGCAATGGATATGAATGTTGTGGTTTAGGAAGAGAAGCTAAGGGACAAGCCTGGATATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGTATTAACAAAACATCTCAATCACCAACAAATCCTCTCATTGTTCTCTTATGGAGCTTTTGTTATTCCAGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCATTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAGTAGGAATGGTGACTTCCCGACAGCGTCGACGAGATGACGAGCTTCGTCGACGCTTTGTTCAACCCATGGAAGCTGGTTTTCATCATTGAATAGCAAGTTAACTTTTGCTGCCTTCACATGGTCAAGAGTGTTGCTGATTTTGCTCTGCTCAATCTGATAGGCCTATGTTAATTGGCTCACCACTTTTTTTCCCTTAATATGGGAGGGAAGGAGAATCCCCTCCACCATTTGAACATTTTTTCATTTTTTTTTCCTAAGGTAGCAATTTAATTTAGGTTAAATTACAAATGCAGTTCCATCAACAACTTTTAACGGTTATGTTTTTATTTACTCCTTAAAATTTAAATGTTATTGCTCTAGACTTTAAGTTGTGATTTTATGTAATTTAGGGTGGTAATCGTGTTAATTAAATGTGACAGCAGAAGCCATCTGTGAAATCACCAT

mRNA sequence

ATGAGTCTGGTTTTAACTGACATCGGCATTCATTCATACAATCGACTTAGAGGCCTTTTTCTTTTCTTCCCCTTCCCATTCAACCGACTTCCCCTGTATCTCTCTGCCCCAGATTCATCTTCTTCTTCCCTCTTTCTGCGAAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTATCTTGCTGAATTACTGTCAGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTTGAGCACGGGAGCCCTTACAGGTCATTAGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTCGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAGCTAAGGGACAAGCCTGGATATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCATTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAGTAGGAATGGTGACTTCCCGACAGCGTCGACGAGATGACGAGCTTCGTCGACGCTTTGTTCAACCCATGGAAGCTGGTTTTCATCATTGAATAGCAAGTTAACTTTTGCTGCCTTCACATGGTCAAGAGTGTTGCTGATTTTGCTCTGCTCAATCTGATAGGCCTATGTTAATTGGCTCACCACTTTTTTTCCCTTAATATGGGAGGGAAGGAGAATCCCCTCCACCATTTGAACATTTTTTCATTTTTTTTTCCTAAGGTAGCAATTTAATTTAGGTTAAATTACAAATGCAGTTCCATCAACAACTTTTAACGGTTATGTTTTTATTTACTCCTTAAAATTTAAATGTTATTGCTCTAGACTTTAAGTTGTGATTTTATGTAATTTAGGGTGGTAATCGTGTTAATTAAATGTGACAGCAGAAGCCATCTGTGAAATCACCAT

Coding sequence (CDS)

ATGAGTCTGGTTTTAACTGACATCGGCATTCATTCATACAATCGACTTAGAGGCCTTTTTCTTTTCTTCCCCTTCCCATTCAACCGACTTCCCCTGTATCTCTCTGCCCCAGATTCATCTTCTTCTTCCCTCTTTCTGCGAAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTATCTTGCTGAATTACTGTCAGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTTGAGCACGGGAGCCCTTACAGGTCATTAGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTCGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAGCTAAGGGACAAGCCTGGATATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCATTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAG

Protein sequence

MSLVLTDIGIHSYNRLRGLFLFFPFPFNRLPLYLSAPDSSSSSLFLRSLCMMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR

Homology

[Close]

BLAST of CmaCh04G008930 vs. ExPASy Swiss-Prot
Match: Q8GWR3 (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.7e-100
Identity = 188/294 (63.95%), Postives = 227/294 (77.21%), Query Frame = 0


Query: 52  MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 111
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 112 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 171
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 172 QAHS-MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 231
           +  S + W  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CR
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCR 190

Query: 232 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 291
           V+IRG+GS+KD ++EEKL+ KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLK
Sbjct: 191 VFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLK 250

Query: 292 PVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNTTGLKRAKT 339
           P+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFN+   KRAKT
Sbjct: 251 PMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of CmaCh04G008930 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.4e-76
Identity = 157/291 (53.95%), Postives = 199/291 (68.38%), Query Frame = 0


Query: 59  GSYFHYP-----PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 118
           G +  YP     PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 119 SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHS 178
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW   Q      V S
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSVSS 142

Query: 179 LGPLQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALT 238
                + +  W    G  +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T
Sbjct: 143 -----SPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 202

Query: 239 ECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLES 298
           +CRV IRG+GSIKD ++E+ +R KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ 
Sbjct: 203 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 262

Query: 299 LLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 339
           LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+N+ G+KRAKT
Sbjct: 263 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of CmaCh04G008930 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.2e-75
Identity = 155/285 (54.39%), Postives = 195/285 (68.42%), Query Frame = 0


Query: 60  SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 119
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 120 GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 179
           G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  H +      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 180 MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 239
           M W      P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRG
Sbjct: 126 MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 185

Query: 240 KGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 299
           KGSIKD  +EEKL+ KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE 
Sbjct: 186 KGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDES 245

Query: 300 LDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
            D  K+QQLRELALLN  LRE SP  S S+SPFN+  +KR KTGR
Sbjct: 246 QDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of CmaCh04G008930 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.0e-73
Identity = 155/279 (55.56%), Postives = 192/279 (68.82%), Query Frame = 0


Query: 67  PSAHASPHRTPSIPLDRE-RYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQT- 126
           P+ + SP +  S P D + +YLAELL+E QKLGPF+QVLP CS+LL+QEI R+S +    
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNH 70

Query: 127 ---SVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRV 186
                D  RF   SP  S    SN        W  +      H   LG  Q  SM W   
Sbjct: 71  GFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGL------HQERLGFPQGTSMDWQGA 130

Query: 187 QGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKD 246
              P++ +VK+++RLDVPVD YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRGKGSIKD
Sbjct: 131 PPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKD 190

Query: 247 ALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKK 306
             +E+KLR KPGYEHL++PLH+L+EAEFP   I++RL HA  V+E LLKPVDE  D YK+
Sbjct: 191 PGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKR 250

Query: 307 QQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           QQLRELA+LN TLRE+SP    S+SPF+  G+KRAKTG+
Sbjct: 251 QQLRELAMLNSTLREDSPHPG-SVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of CmaCh04G008930 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.1e-73
Identity = 152/281 (54.09%), Postives = 190/281 (67.62%), Query Frame = 0


Query: 66  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 125
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 126 GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMA 185
            L  N T +     +H SP  S G   N R  D+ GW            S GP       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 186 WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 245
           W    G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+G
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRG 218

Query: 246 SIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 305
           SIKD ++EE +R KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D
Sbjct: 219 SIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHD 278

Query: 306 QYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 339
            YKKQQLRELALLNGTLREE   MS S+SP+N+ G+KRAKT
Sbjct: 279 MYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of CmaCh04G008930 vs. ExPASy TrEMBL
Match: A0A0A0L3B7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.7e-170
Identity = 299/317 (94.32%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 24  PFPFNRLPLYLSAPDSSSSSLFLRSLCMMGERTPPGSYFHYPPPSAHASPHRTPSIPLDR 83
           PF F    LYL   DSS SSLFLRSLC+MGERTPPGSYFHYPPPSAHASPHRTPSIPLDR
Sbjct: 83  PFKFQPTALYLFPRDSSPSSLFLRSLCVMGERTPPGSYFHYPPPSAHASPHRTPSIPLDR 142

Query: 84  ERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQL 143
           ER LAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQL
Sbjct: 143 ERCLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQL 202

Query: 144 SNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKY 203
           SNGRPMD+EGWPPMQMEGSGHVH +GPLQAHSM WPRVQGIPTTPIVKRVVRLDVPVDKY
Sbjct: 203 SNGRPMDMEGWPPMQMEGSGHVHGMGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKY 262

Query: 204 PNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHL 263
           PNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKL+DKPGYEHLNEPLHL
Sbjct: 263 PNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHL 322

Query: 264 LVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSP 323
           LVEAEFPEDTIN+RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSP
Sbjct: 323 LVEAEFPEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSP 382

Query: 324 SMSPFNTTGLKRAKTGR 341
           SMSPFN+TGLKRAKTGR
Sbjct: 383 SMSPFNSTGLKRAKTGR 399

[Close]

BLAST of CmaCh04G008930 vs. ExPASy TrEMBL
Match: A0A6J1JCV7 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=3661 GN=LOC111485631 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.4e-165
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 51  MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 110
           MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 111 LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 170
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 120

Query: 171 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 230
           LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 231 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 290
           VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 291 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of CmaCh04G008930 vs. ExPASy TrEMBL
Match: A0A6J1FX42 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3662 GN=LOC111447793 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 7.6e-165
Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 51  MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 110
           MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 111 LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 170
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 120

Query: 171 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 230
           LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 231 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 290
           VYIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 291 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of CmaCh04G008930 vs. ExPASy TrEMBL
Match: A0A5D3BT43 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00980 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 5.1e-161
Identity = 281/289 (97.23%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 52  MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 111
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 112 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 171
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVH +GPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 172 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 231
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 232 YIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 291
           YIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKP 240

Query: 292 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of CmaCh04G008930 vs. ExPASy TrEMBL
Match: A0A1S3BST0 (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 5.1e-161
Identity = 281/289 (97.23%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 52  MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 111
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 112 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 171
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVH +GPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 172 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 231
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 232 YIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 291
           YIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKP 240

Query: 292 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of CmaCh04G008930 vs. NCBI nr
Match: KAG6600718.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 652.9 bits (1683), Expect = 1.5e-183
Identity = 322/326 (98.77%), Postives = 323/326 (99.08%), Query Frame = 0


Query: 15  RLRGLFLFFPFPFNRLPLYLSAPDSSSSSLFLRSLCMMGERTPPGSYFHYPPPSAHASPH 74
           R   LFLFFPFPFNRLPLYLSAPDSSSSSLFLRSLCMMGERTPPGSYFHYPPPSAHASPH
Sbjct: 2   RAGALFLFFPFPFNRLPLYLSAPDSSSSSLFLRSLCMMGERTPPGSYFHYPPPSAHASPH 61

Query: 75  RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHG 134
           RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHG
Sbjct: 62  RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHG 121

Query: 135 SPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPIVKRVV 194
           SPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPIVKRVV
Sbjct: 122 SPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPIVKRVV 181

Query: 195 RLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLRDKPGY 254
           RLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKL+DKPGY
Sbjct: 182 RLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGY 241

Query: 255 EHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTL 314
           EHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTL
Sbjct: 242 EHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTL 301

Query: 315 REESPSMSPSMSPFNTTGLKRAKTGR 341
           REESPSMSPSMSPFNTTGLKRAKTGR
Sbjct: 302 REESPSMSPSMSPFNTTGLKRAKTGR 327

[Close]

BLAST of CmaCh04G008930 vs. NCBI nr
Match: XP_022988372.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima])

HSP 1 Score: 590.9 bits (1522), Expect = 7.1e-165
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 51  MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 110
           MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 111 LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 170
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 120

Query: 171 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 230
           LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 231 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 290
           VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 291 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of CmaCh04G008930 vs. NCBI nr
Match: XP_022942905.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_023552162.1 KH domain-containing protein At1g09660/At1g09670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.7 bits (1519), Expect = 1.6e-164
Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 51  MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 110
           MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 111 LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 170
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 120

Query: 171 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 230
           LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 231 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 290
           VYIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 291 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of CmaCh04G008930 vs. NCBI nr
Match: KAG6577363.1 (Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 583.2 bits (1502), Expect = 1.5e-162
Identity = 292/319 (91.54%), Postives = 298/319 (93.42%), Query Frame = 0


Query: 23  FPFPFNRLPLYLSAPDSSSSSLFLRSLCMMGERTPPGSYFHYPPPSAHASPHRTPSIPLD 82
           FP P     +   AP       FL+SLC+MGERTPPGSYFHYPPPSAHASPHRTPSIPLD
Sbjct: 210 FPLPLCLRFISFFAP-PPPPPFFLQSLCVMGERTPPGSYFHYPPPSAHASPHRTPSIPLD 269

Query: 83  RERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQ 142
           RERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQ
Sbjct: 270 RERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQ 329

Query: 143 LSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQ-GIPTTPIVKRVVRLDVPVD 202
           LSNGRPMDLEGWPPMQMEGSGHVH +G LQAHSM WPRVQ GIP TPIVKRVVRLDVPVD
Sbjct: 330 LSNGRPMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVD 389

Query: 203 KYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPL 262
           KYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKL+DKPGYEHLNEPL
Sbjct: 390 KYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPL 449

Query: 263 HLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSM 322
           HLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSM
Sbjct: 450 HLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSM 509

Query: 323 SPSMSPFNTTGLKRAKTGR 341
           SPSMSPFN+TGLKRAKTGR
Sbjct: 510 SPSMSPFNSTGLKRAKTGR 527

[Close]

BLAST of CmaCh04G008930 vs. NCBI nr
Match: XP_038904738.1 (KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida])

HSP 1 Score: 581.3 bits (1497), Expect = 5.6e-162
Identity = 283/289 (97.92%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 52  MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 111
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 112 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 171
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEG+GHVH +GPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGTGHVHGMGPL 120

Query: 172 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 231
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 232 YIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 291
           YIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240

Query: 292 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of CmaCh04G008930 vs. TAIR 10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 366.3 bits (939), Expect = 2.6e-101
Identity = 188/294 (63.95%), Postives = 227/294 (77.21%), Query Frame = 0


Query: 52  MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 111
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 112 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 171
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 172 QAHS-MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 231
           +  S + W  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CR
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCR 190

Query: 232 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 291
           V+IRG+GS+KD ++EEKL+ KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLK
Sbjct: 191 VFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLK 250

Query: 292 PVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNTTGLKRAKT 339
           P+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFN+   KRAKT
Sbjct: 251 PMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of CmaCh04G008930 vs. TAIR 10
Match: AT1G09660.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-84
Identity = 154/242 (63.64%), Postives = 187/242 (77.27%), Query Frame = 0


Query: 52  MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 111
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 112 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 171
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 172 QAHS-MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 231
           +  S + W  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CR
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCR 190

Query: 232 VYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 291
           V+IRG+GS+KD ++EEKL+ KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLK
Sbjct: 191 VFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLK 247

Query: 292 PV 293
           P+
Sbjct: 251 PM 247

[Close]

BLAST of CmaCh04G008930 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 285.8 bits (730), Expect = 4.5e-77
Identity = 157/291 (53.95%), Postives = 199/291 (68.38%), Query Frame = 0


Query: 59  GSYFHYP-----PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 118
           G +  YP     PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 119 SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHS 178
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW   Q      V S
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSVSS 142

Query: 179 LGPLQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALT 238
                + +  W    G  +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T
Sbjct: 143 -----SPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 202

Query: 239 ECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLES 298
           +CRV IRG+GSIKD ++E+ +R KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ 
Sbjct: 203 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 262

Query: 299 LLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 339
           LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+N+ G+KRAKT
Sbjct: 263 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of CmaCh04G008930 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 283.5 bits (724), Expect = 2.3e-76
Identity = 155/285 (54.39%), Postives = 195/285 (68.42%), Query Frame = 0


Query: 60  SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 119
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 120 GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 179
           G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  H +      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 180 MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 239
           M W      P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRG
Sbjct: 126 MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 185

Query: 240 KGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 299
           KGSIKD  +EEKL+ KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE 
Sbjct: 186 KGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDES 245

Query: 300 LDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 341
            D  K+QQLRELALLN  LRE SP  S S+SPFN+  +KR KTGR
Sbjct: 246 QDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of CmaCh04G008930 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 276.2 bits (705), Expect = 3.6e-74
Identity = 152/281 (54.09%), Postives = 190/281 (67.62%), Query Frame = 0


Query: 66  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 125
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 126 GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMA 185
            L  N T +     +H SP  S G   N R  D+ GW            S GP       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 186 WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 245
           W    G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+G
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRG 218

Query: 246 SIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 305
           SIKD ++EE +R KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D
Sbjct: 219 SIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHD 278

Query: 306 QYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 339
            YKKQQLRELALLNGTLREE   MS S+SP+N+ G+KRAKT
Sbjct: 279 MYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of CmaCh04G008930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWR3	3.7e-100	63.95	KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702...	[more]
Q0WLR1	6.4e-76	53.95	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q8GYR4	3.2e-75	54.39	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q75GR5	1.0e-73	55.56	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	5.1e-73	54.09	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of CmaCh04G008930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3B7	2.7e-170	94.32	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=...	[more]
A0A6J1JCV7	3.4e-165	100.00	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1FX42	7.6e-165	99.66	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3...	[more]
A0A5D3BT43	5.1e-161	97.23	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BST0	5.1e-161	97.23	KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of CmaCh04G008930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600718.1	1.5e-183	98.77	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022988372.1	7.1e-165	100.00	KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima]	[more]
XP_022942905.1	1.6e-164	99.66	KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_0...	[more]
KAG6577363.1	1.5e-162	91.54	Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038904738.1	5.6e-162	97.92	KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh04G008930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09660.1	2.6e-101	63.95	RNA-binding KH domain-containing protein	[more]
AT1G09660.2	1.0e-84	63.64	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	4.5e-77	53.95	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	2.3e-76	54.39	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	3.6e-74	54.09	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 190..290 e-value: 0.0019 score: 27.4
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 85..119 e-value: 4.5E-10 score: 39.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 80..322 e-value: 1.1E-68 score: 233.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 196..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..340
None	No IPR available	PANTHER	PTHR11208:SF101	OS01G0886300 PROTEIN	coord: 58..340
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 195..315 e-value: 3.63743E-51 score: 163.954
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 58..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G008930.1	CmaCh04G008930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding