CmaCh04G008500 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G008500
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptioncytochrome c oxidase subunit 6a, mitochondrial-like
LocationCma_Chr04: 4363716 .. 4366327 (+)
RNA-Seq ExpressionCmaCh04G008500
SyntenyCmaCh04G008500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAGTTTTGGTGAAAGGGCTCTCGATCGAAATTGCAAGGGTATGGTCATTTCAATTATAACTCGGGCATTGGCGATTTGTTAGAGAAAGAGCGAGTCAAAAGAGAATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCATCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCGTAAGTCTCTCTCTCAGTATTTCTGGATATGTTTTTTTCTTTATTGACGGAATTTTTCTTCTTACTTTTGGCAACTTCGTTTAGCCTATTCATTTTCCTGGCCTATTTTTATGATGAAATTGGGGAAACTAGGATGATATTAATTGTTGAATCGTGTTCAGAAATTTGGACCAAGATAATTTGGTCGGGCGCTCTTTCTTCCTTTTAGATTGCAAGTCTTGCAAGGGGAGGTTTTTTTTTTCCCTTAAATTTTAAATTCAGATTTAAATGTTATTATTCAATAGTTTTGTTAAATCATAGTATGGGATGGGAGTGTATACATGACATATTTGACAATTAACTGTAGATAGGGTTTCCAGTCGCTAAGGAGTAGTTTTGAATTAAAGTTCGTGGTAAGGAAAAAGGCAAGAGGGGCAAAAGCTTCCTGTTCCATTACTGAGTGGCAACAATATCATTCTTGATTTCTGTAATTACAAAAAAATCCTTTCTAAAGTCTTATATGTGGCTTGTGGTAGGTTCAGTTTCCTTTTGATTTCACATAAATACGACATGAAGGAAAGGGAATATGCAGTAAGTTTATTAGACGGTTTAGGGCTTCAGTTAAAAAAAATTCTCCTCTGGGAAGTTTATACGCCTCTAATCCTACGCCTGCCTCTTATTTCTTTATTTCCCCCATTTTTTTCTTTCTTTCTTTTCCCCACATAATTCTGGGTTGCGAGTAAGGGGACGAATATTATTCTGTGTTTTGAGGTGATTTCAGTAAATTGTTGGAGCTAAACCAATCTGTGCTGTGAATTTATTTTATATTGATCCACCATAACATATACTTGATGGTGGCCTTTACTTAGTTGGGTACAAATTATGTATTATTATTTTTAAATACTATTTGAGACTTATAGTGTACAAGCAAGTGGGAGAGAAAAATTTTATGCAGGAGCGCAATGATGCTTGTACTGCCTATGCTTTATCTCTCATACAACCTTTCTTTCTTTATTTCAGTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAACCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGTGAGCTACAACTTTAGTCAATTTATAATTTTCCTACCACTTCTCAATATCGTAGTTGCATTATTCATTGTACTCTCATGTGTGGCCAATTCATTTTTGTCTGGGTTTTTATTGTATGCAGGCATACCCATATTTGCACATACGCAATAAAGAGTTCCCATGGGGTAAGTTTCCATTGCATTACAAGTTCTATGACATCTTTTATATCTCTTGGCAGTCGCAATTTGGGTTTTGATGAGGTAACTAGAACTGGATGCTGCAGTGATGTCATGTAGTATATATTTACTGGATGCCAAGCAAACTTACAGCTATCTTGTAACTAATATATTTACTGCTAACTTGGCAGCTAGCAACTAATATGCTCATAAATACCTCGTTCTGCTTGCTAACAGTTTTTAGTCCTATTATATAACCTTGTCCTTTCATTAACCCAACTCTCACTACTTTTAAATGCTCCATGGTCAATTTCTAATGGTAGTTCAACAGCTTCCTCTTTCTGTTGGTTGATCATCTCAAGGGTCTATGGATACTTCTGGGATAAACGTGTTTGTAAGCTGTTTCCAAGAAGTAAACATTTTAGACTAAAAGTTATATGTTTTTGTAACTGTTTTCGACAGTTGCTTCTCTCAGTATATTTTAGAAGAACTGCAGTTGAAATGTTAAAATCTTTACAAACGAAAAAGTCATAGCATCATCGTAGGTAAAAGAGCTGGAGATGATGTACCACGGCATTTATCAGAACTGGTTGAATTTGATCGATGATCTTATATTCGTTCATCTTTGCTCTCTGCTCGTTGCTCATTTTCTCCTTTTCTGTTTATTATTTATTGTGAAAATAATACTGTTTTGTTTTCAATCCCTTTTGCATCAGGTCCCGATGGTCTTTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGGCCCGTTTGGTTGGATTTTTCTTTTTAATGTGCGTGGGCCATTTTGCATTTGTTAAATGCTAGCAGGGTCCTGTGTGAATGAATCATGGTTTAATTTCTTGTGTTGTCAAAACTATCCTTCCTGATTAATAAGCCAAACTTTCCACCATTCTAAGGCTCAGTTTGCAGTATGCTGTGTTTGGATTGAAATGTGAGTTTGCAAGTAATAATAGTATTTGAGGTGGTGATGTTTACTTGGTAAACTGAAGCAGTTGTTTGGTTTATCAACAAAGTTGGAACAGGAACTTCGATTTATAAATATTAAC

mRNA sequence

GGAAGTTTTGGTGAAAGGGCTCTCGATCGAAATTGCAAGGGTATGGTCATTTCAATTATAACTCGGGCATTGGCGATTTGTTAGAGAAAGAGCGAGTCAAAAGAGAATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCATCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAACCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAAGAGTTCCCATGGGGTCCCGATGGTCTTTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGGCCCGTTTGGTTGGATTTTTCTTTTTAATGTGCGTGGGCCATTTTGCATTTGTTAAATGCTAGCAGGGTCCTGTGTGAATGAATCATGGTTTAATTTCTTGTGTTGTCAAAACTATCCTTCCTGATTAATAAGCCAAACTTTCCACCATTCTAAGGCTCAGTTTGCAGTATGCTGTGTTTGGATTGAAATGTGAGTTTGCAAGTAATAATAGTATTTGAGGTGGTGATGTTTACTTGGTAAACTGAAGCAGTTGTTTGGTTTATCAACAAAGTTGGAACAGGAACTTCGATTTATAAATATTAAC

Coding sequence (CDS)

ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCATCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAACCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAAGAGTTCCCATGGGGTCCCGATGGTCTTTTTGAGGTGAAACATCACTGA

Protein sequence

MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Homology
[Close]
BLAST of CmaCh04G008500 vs. ExPASy Swiss-Prot
Match: Q9T070 (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX6A PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-33
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]
BLAST of CmaCh04G008500 vs. ExPASy TrEMBL
Match: A0A6J1KMD3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495450 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. ExPASy TrEMBL
Match: A0A6J1FPI8 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111447063 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.4e-49
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. ExPASy TrEMBL
Match: A0A6J1ERW3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435960 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.8e-46
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. ExPASy TrEMBL
Match: A0A6J1C3V4 (cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008246 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 91/98 (92.86%), Postives = 92/98 (93.88%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAA RGAS+NSAQPKRGFASSAHDD  ETAKWEKITYAGI ACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASQNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFE K H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFETKEH 98

[Close]
BLAST of CmaCh04G008500 vs. ExPASy TrEMBL
Match: A0A1S3BPM0 (cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491837 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.0e-45
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMA+IRSN LRAA+RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFY
Sbjct: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. NCBI nr
Match: XP_023001309.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 2.4e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. NCBI nr
Match: XP_022941809.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG6600678.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031316.1 Cytochrome c oxidase subunit 6a, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 7.0e-49
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. NCBI nr
Match: XP_023545456.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.4 bits (511), Expect = 3.5e-48
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAA RGASRNSAQPKRGF+SSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. NCBI nr
Match: XP_038905594.1 (cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida])

HSP 1 Score: 197.2 bits (500), Expect = 6.6e-47
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMA+IRSNLLRAA+RGASRNSAQPKRGFASSAHDDA ETAKWEKITYAGIA CT LAFY
Sbjct: 1  MAMASIRSNLLRAAVRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. NCBI nr
Match: XP_023551866.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 9.5e-46
Identity = 91/98 (92.86%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAA+RGASRNSAQPKRGFASSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMATIRSNLLRAALRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmaCh04G008500 vs. TAIR 10
Match: AT4G37830.1 (cytochrome c oxidase-related )

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-34
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]
BLAST of CmaCh04G008500 vs. TAIR 10
Match: AT4G37830.2 (cytochrome c oxidase-related )

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PP          EFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPP----------EFPWGPDGLFEVKHN 89

The following BLAST results are available for this feature:
BLAST of CmaCh04G008500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0701.9e-3370.71Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of CmaCh04G008500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KMD31.2e-49100.00cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1FPI83.4e-4998.98cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1ERW37.8e-4692.86cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1C3V41.3e-4592.86cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN... [more]
A0A1S3BPM03.0e-4590.82cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103... [more]
BLAST of CmaCh04G008500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023001309.12.4e-49100.00cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima][more]
XP_022941809.17.0e-4998.98cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG660... [more]
XP_023545456.13.5e-4896.94cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo][more]
XP_038905594.16.6e-4794.90cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida][more]
XP_023551866.19.5e-4692.86cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh04G008500 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37830.11.4e-3470.71cytochrome c oxidase-related [more]
AT4G37830.21.8e-2662.63cytochrome c oxidase-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036418Cytochrome c oxidase, subunit VIa superfamilyGENE3D4.10.95.10Cytochrome c oxidase, subunit VIacoord: 29..98
e-value: 6.9E-14
score: 53.5
IPR036418Cytochrome c oxidase, subunit VIa superfamilySUPERFAMILY81411Mitochondrial cytochrome c oxidase subunit VIacoord: 30..97
IPR001349Cytochrome c oxidase, subunit VIaPIRSFPIRSF000277COX_VIacoord: 1..98
e-value: 1.7E-22
score: 77.7
IPR001349Cytochrome c oxidase, subunit VIaPFAMPF02046COX6Acoord: 38..88
e-value: 2.0E-5
score: 25.0
IPR001349Cytochrome c oxidase, subunit VIaPANTHERPTHR11504CYTOCHROME C OXIDASE POLYPEPTIDE VIAcoord: 1..98
NoneNo IPR availablePANTHERPTHR11504:SF6CYTOCHROME C OXIDASE SUBUNIT 6A1-RELATEDcoord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G008500.1CmaCh04G008500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0030234 enzyme regulator activity