CmaCh04G007690 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G007690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	Cma_Chr04: 3906567 .. 3908384 (-)
RNA-Seq Expression	CmaCh04G007690
Synteny	CmaCh04G007690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAAGAGAGAGAAAAGGTAATCAATCATGTCTGCGACTGCAACATAATCAGAGGATAGAGAAAGGGAAAGGGCTCAGAGAAGGCAGAGAAGAAAAACAGCAACAGCAACAAGAAGAAGAAGAAGAAGCAGCAGCAGCAGCGTATGAGTGGATATGGGACTTTAGTGGTGTATTTAAGTTAGCACTTCGCCCCTAAACAAAGCCCATGGCGGCGTTGCAGACTTCACTTCAGTTTTAGACAGAGAGAGAAAAATACCCTTTAGTGTATTAGAGAGACAGAGACAGAGACAGAGAGATTTCAGAATCTGATTCCCAATTCGACCTCTTTTCGACCTCTTTTCTACCTCCCCCCCCCCTTTCTTTTCTCTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGAGAAGGTAAGGAGAAAAAGTTGGAAAGGAATTGATTGATACATACCCTTTTTACAACTCTGGCTTTCGATCGCCCTTGAGAGGTTGTTTCTGATATGGATTTTAATTCCAAATCAGGAATAGTATCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGTACAATCAAATTAATTCTTGCTCTTTTCATTTTTATTTTTATTTTTATATATTATATTTTTTTAGATTTCTTGTGAGGGAGGGCTTTGTTTTGGAAGTTTTTCCAAATTCCAGCAAGACCCACATCGATTTTGGTCATGATTGACAGAATCAATCTCTCTCTTTCTCTAAAATGGTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGGTTTTAGGGTTAGAAATGGGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATCACCGCCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACGTCTTAATGTTGTAGCGAATTTTAAGAGATCGAAGAGAAATAGCTGAAATTGAGAAGGGGGAATGAAGGAAGTATATAATTTTTTATGATAAATTTATAAGCTTGTAATTTTTCAAGAGTTCGCATTAATATGCCGCCATTGTTGGAACTTCGATGCAACCTTTTCCTTTTTTTTTTTCTTTCTTCTCGGTTTCGTATTTCGTAATTCTCAATCTCTCAAACCCT

mRNA sequence

GAATAAGAGAGAGAAAAGGTAATCAATCATGTCTGCGACTGCAACATAATCAGAGGATAGAGAAAGGGAAAGGGCTCAGAGAAGGCAGAGAAGAAAAACAGCAACAGCAACAAGAAGAAGAAGAAGAAGCAGCAGCAGCAGCGTATGAGTGGATATGGGACTTTAGTGGTGTATTTAAGTTAGCACTTCGCCCCTAAACAAAGCCCATGGCGGCGTTGCAGACTTCACTTCAGTTTTAGACAGAGAGAGAAAAATACCCTTTAGTGTATTAGAGAGACAGAGACAGAGACAGAGAGATTTCAGAATCTGATTCCCAATTCGACCTCTTTTCGACCTCTTTTCTACCTCCCCCCCCCCTTTCTTTTCTCTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGAGAAGGTAAGGAGAAAAAGTTGGAAAGGAATTGATTGATACATACCCTTTTTACAACTCTGGCTTTCGATCGCCCTTGAGAGGTTGTTTCTGATATGGATTTTAATTCCAAATCAGGAATAGTATCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATGGGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATCACCGCCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACGTCTTAATGTTGTAGCGAATTTTAAGAGATCGAAGAGAAATAGCTGAAATTGAGAAGGGGGAATGAAGGAAGTATATAATTTTTTATGATAAATTTATAAGCTTGTAATTTTTCAAGAGTTCGCATTAATATGCCGCCATTGTTGGAACTTCGATGCAACCTTTTCCTTTTTTTTTTTCTTTCTTCTCGGTTTCGTATTTCGTAATTCTCAATCTCTCAAACCCT

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATGGGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATCACCGCCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACGTCTTAA

Protein sequence

MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

Homology

[Close]

BLAST of CmaCh04G007690 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 136/338 (40.24%), Postives = 179/338 (52.96%), Query Frame = 0


Query: 1   MAGFFPL---GGGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW 60
           MAGFF L   GGG  P+ H      P+++ T+   W RN  S              L +W
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ----------QQQQVQQQ--------AGEGFVYSGDESPPRS--SLVMLRSGRNGGGQVI 120
                     QQQQ QQQ        AG G   S       S  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------------- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER              
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 ---------HLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ 240
                     + + +T++   R  +  +SGLE+GNFP EVSS+AVFRCVR++++D+  ++
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEE 240

Query: 241 FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP 259
           +AY+TAV+IGGH FKG+LYD GP ++         +S  GG+    L+   P+ +   P 
Sbjct: 241 YAYKTAVSIGGHVFKGVLYDQGPAER---------SSSGGGSQPLNLITAGPSASSSSPN 300

[Close]

BLAST of CmaCh04G007690 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.1e-49
Identity = 138/354 (38.98%), Postives = 178/354 (50.28%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLPTT------TTTDGLFWYRN--------------YESLGIW-- 60
           MA FF LGG +E  +   ++      T ++  F YRN              Y+   +W  
Sbjct: 1   MANFFSLGGNQEQQHQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYKGFELWQS 60

Query: 61  --------QQQQVQQQ----------------------AGEGF-VYSGDESPPRSSLVML 120
                   Q  Q QQQ                      +  GF + +GD    RS  VM+
Sbjct: 61  GNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASRSGFVMM 120

Query: 121 RSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR 180
           RSG  GGG  ISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRER  +
Sbjct: 121 RSG--GGG--ISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ 180

Query: 181 SDATNL--------------KRPRDNTAASS-----------GLEMGNFPMEVSSTAVFR 240
             A                 KR R++ +ASS           GLE+G FP +V ++AVF+
Sbjct: 181 LAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFPSKVRTSAVFQ 240

Query: 241 CVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGG------ 264
           C++M+++++  DQ AYQ AV+IGGH FKGILYD G E Q          +  GG      
Sbjct: 241 CIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDTSSGGSAGGVQ 300

[Close]

BLAST of CmaCh04G007690 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 1.5e-48
Identity = 121/247 (48.99%), Postives = 152/247 (61.54%), Query Frame = 0


Query: 62  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 121
           ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA+K
Sbjct: 125 AAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAK 184

Query: 122 RRERHLR----SDATNL-------KRPRDNTAAS------------SGLEMGNFPMEVSS 181
           RRER  +       T L       KR R+N  A+            SGLE+GNFP EVSS
Sbjct: 185 RRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSS 244

Query: 182 TAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPNSASP 241
           +AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               S+S 
Sbjct: 245 SAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSG 304

Query: 242 DGGAL---LITAPTTTMELPPIS--------------AALLDPPPPYPAPLNTYVAAGTQ 264
            GGA    LITA + T+     S              A  +DP   YP P+NT++ AGTQ
Sbjct: 305 GGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFM-AGTQ 364

[Close]

BLAST of CmaCh04G007690 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-42
Identity = 129/312 (41.35%), Postives = 156/312 (50.00%), Query Frame = 0


Query: 29  YRNYESLGIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLV 88
           Y N +   IW           QQQQ QQ A         G V SG  S       RS   
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 89  MLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPAS 148
            + S    GG  +      +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+
Sbjct: 105 NVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAA 164

Query: 149 KRRER---------HLRS--DATNLKRPRD--------------------------NTAA 208
           KRRER         H  S  +  N KR R+                          N  +
Sbjct: 165 KRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANS 224

Query: 209 SSGLEMG-NFPMEVSSTAVFRCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPE 264
           +SGLE+  + P EV+S A+FRCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE
Sbjct: 225 NSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of CmaCh04G007690 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 107/250 (42.80%), Postives = 136/250 (54.40%), Query Frame = 0


Query: 56  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTW 115
           D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTW
Sbjct: 98  DHEPVRSSTGGFTVTRQGN---MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTW 157

Query: 116 VPASKRRERHLRSDATNLKRPRDN---------------------------------TAA 175
           V A+KRRER  +      KR RD                                   A+
Sbjct: 158 VSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNAS 217

Query: 176 SSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQ 235
           SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP    
Sbjct: 218 SSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH 277

Query: 236 QPPPPPNSASPDGGA-------LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLN 259
                  S+S +G         L+ + P+  TT  +  ++     +DP   Y A   P N
Sbjct: 278 H----RYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFN 337

[Close]

BLAST of CmaCh04G007690 vs. ExPASy TrEMBL
Match: A0A6J1J480 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 5.7e-152
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPP 60
           MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPP
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPP 60

Query: 61  RSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 120
           RSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK
Sbjct: 61  RSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 120

Query: 121 RRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQT 180
           RRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQT
Sbjct: 121 RRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQT 180

Query: 181 AVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPP 240
           AVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPP
Sbjct: 181 AVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPP 240

Query: 241 PPYPAPLNTYVAAGTQFFLPPTS 264
           PPYPAPLNTYVAAGTQFFLPPTS
Sbjct: 241 PPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of CmaCh04G007690 vs. ExPASy TrEMBL
Match: A0A6J1FUH1 (protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 9.5e-147
Identity = 259/266 (97.37%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60
           MAGFFPLGGGREPNYHLP  TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSD TNLKRPRDNTAASSGLEM NFP+EVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQ-PPPPPNSASPDGGALLITAPTTTMELPPISAALL 240
           QTAVNIGGHTFKGILYDHGPEQQQQ PPPPPNSASPDGGALLITAP+TTMELPPISAALL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALL 240

Query: 241 DPPPPYPAPLNTYVAAGTQFFLPPTS 264
           DPPPPYPAPLNTYVAAGTQFFLPPTS
Sbjct: 241 DPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of CmaCh04G007690 vs. ExPASy TrEMBL
Match: A0A0A0KUG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 6.2e-98
Identity = 192/287 (66.90%), Postives = 211/287 (73.52%), Query Frame = 0


Query: 1   MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW-------QQQ 60
           MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W       QQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQ 60

Query: 61  QVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCRT 120
             Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG V SCQDCGNQAKKDC+HMRCRT
Sbjct: 61  PAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRT 120

Query: 121 CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVS 180
           CCKSRGF+CETHVKSTWVPASKRR+RHLRSD  N KRP+D      SSGL+MGNFP EV+
Sbjct: 121 CCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVT 180

Query: 181 STAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGG 240
           + AVFRCVRMT+LDET+DQ+AYQTAVNIGG  FKGILYDHGPE   QPPPPP+S+     
Sbjct: 181 TPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPE---QPPPPPSSS----- 240

Query: 241 ALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
                           SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 ----------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of CmaCh04G007690 vs. ExPASy TrEMBL
Match: A0A5A7TNR6 (Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005220 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.0e-97
Identity = 192/288 (66.67%), Postives = 211/288 (73.26%), Query Frame = 0


Query: 1   MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQ 60
           MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W        QQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120
           Q  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+R LRSD  N KRP+D      SSGL+M NFPMEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDG 240
           ++ AVFRCVRMTTLDET+DQ+AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+S   
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSSS--- 240

Query: 241 GALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
                            +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 -----------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of CmaCh04G007690 vs. ExPASy TrEMBL
Match: A0A1S3CNX3 (protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.0e-97
Identity = 192/288 (66.67%), Postives = 211/288 (73.26%), Query Frame = 0


Query: 1   MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQ 60
           MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W        QQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120
           Q  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+R LRSD  N KRP+D      SSGL+M NFPMEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDG 240
           ++ AVFRCVRMTTLDET+DQ+AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+S   
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSSS--- 240

Query: 241 GALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
                            +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 -----------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: XP_022982329.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 546.6 bits (1407), Expect = 1.2e-151
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPP 60
           MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPP
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPP 60

Query: 61  RSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 120
           RSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK
Sbjct: 61  RSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 120

Query: 121 RRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQT 180
           RRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQT
Sbjct: 121 RRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQT 180

Query: 181 AVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPP 240
           AVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPP
Sbjct: 181 AVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPP 240

Query: 241 PPYPAPLNTYVAAGTQFFLPPTS 264
           PPYPAPLNTYVAAGTQFFLPPTS
Sbjct: 241 PPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: XP_022942307.1 (protein SHORT INTERNODES-like [Cucurbita moschata] >XP_022942308.1 protein SHORT INTERNODES-like [Cucurbita moschata])

HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146
Identity = 259/266 (97.37%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60
           MAGFFPLGGGREPNYHLP  TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSD TNLKRPRDNTAASSGLEM NFP+EVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQ-PPPPPNSASPDGGALLITAPTTTMELPPISAALL 240
           QTAVNIGGHTFKGILYDHGPEQQQQ PPPPPNSASPDGGALLITAP+TTMELPPISAALL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALL 240

Query: 241 DPPPPYPAPLNTYVAAGTQFFLPPTS 264
           DPPPPYPAPLNTYVAAGTQFFLPPTS
Sbjct: 241 DPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: XP_023552309.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 257/268 (95.90%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLPTTTT---TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE 60
           MAGF+PLGGGREPNYHLPTTTT   TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTITDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE 60

Query: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120
           SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP
Sbjct: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120

Query: 121 ASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFA 180
           ASKRRERHLRSD TNLKRPRDNTAASSGLEMGN P+EVSSTAVFRCVRMTTLDETNDQFA
Sbjct: 121 ASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNLPVEVSSTAVFRCVRMTTLDETNDQFA 180

Query: 181 YQTAVNIGGHTFKGILYDHGPEQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAA 240
           YQTAVNIGGHTFKGILYDHGPEQQQQ  PPPPPNSASPDGGALLITAP+TTMELPPIS A
Sbjct: 181 YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGALLITAPSTTMELPPISTA 240

Query: 241 LLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
           LLDPPPPYPAPLNTYVAAGTQFFLPPTS
Sbjct: 241 LLDPPPPYPAPLNTYVAAGTQFFLPPTS 268

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: KAG7031235.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145
Identity = 257/267 (96.25%), Postives = 260/267 (97.38%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60
           MAGF+PLGGGREPNYHLP  TTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSD TNLKRPRDNTAASSGLEMGNFP+EVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAAL 240
           QTAVNIGGHTFKGILYDHGPEQQQQ  PPPPPNSASPDGG LLITAP+TTMELPPISAAL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240

Query: 241 LDPPPPYPAPLNTYVAAGTQFFLPPTS 264
           LDPPPPYPAPLNTYVAAGTQFFLPPTS
Sbjct: 241 LDPPPPYPAPLNTYVAAGTQFFLPPTS 267

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: XP_023552316.1 (protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 517.7 bits (1332), Expect = 5.9e-143
Identity = 255/268 (95.15%), Postives = 258/268 (96.27%), Query Frame = 0


Query: 1   MAGFFPLGGGREPNYHLPTTTT---TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE 60
           MAGF+PLGGGREPNYHLPTTTT   TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTITDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE 60

Query: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120
           SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP
Sbjct: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120

Query: 121 ASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFA 180
           ASKRRERHLRSD TNLKRPRDNTAASS  EMGN P+EVSSTAVFRCVRMTTLDETNDQFA
Sbjct: 121 ASKRRERHLRSDGTNLKRPRDNTAASS--EMGNLPVEVSSTAVFRCVRMTTLDETNDQFA 180

Query: 181 YQTAVNIGGHTFKGILYDHGPEQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAA 240
           YQTAVNIGGHTFKGILYDHGPEQQQQ  PPPPPNSASPDGGALLITAP+TTMELPPIS A
Sbjct: 181 YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGALLITAPSTTMELPPISTA 240

Query: 241 LLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
           LLDPPPPYPAPLNTYVAAGTQFFLPPTS
Sbjct: 241 LLDPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of CmaCh04G007690 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 198.0 bits (502), Expect = 9.6e-51
Identity = 136/338 (40.24%), Postives = 179/338 (52.96%), Query Frame = 0


Query: 1   MAGFFPL---GGGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW 60
           MAGFF L   GGG  P+ H      P+++ T+   W RN  S              L +W
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ----------QQQQVQQQ--------AGEGFVYSGDESPPRS--SLVMLRSGRNGGGQVI 120
                     QQQQ QQQ        AG G   S       S  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------------- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER              
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 ---------HLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ 240
                     + + +T++   R  +  +SGLE+GNFP EVSS+AVFRCVR++++D+  ++
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEE 240

Query: 241 FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP 259
           +AY+TAV+IGGH FKG+LYD GP ++         +S  GG+    L+   P+ +   P 
Sbjct: 241 YAYKTAVSIGGHVFKGVLYDQGPAER---------SSSGGGSQPLNLITAGPSASSSSPN 300

[Close]

BLAST of CmaCh04G007690 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-49
Identity = 121/247 (48.99%), Postives = 152/247 (61.54%), Query Frame = 0


Query: 62  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 121
           ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA+K
Sbjct: 125 AAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAK 184

Query: 122 RRERHLR----SDATNL-------KRPRDNTAAS------------SGLEMGNFPMEVSS 181
           RRER  +       T L       KR R+N  A+            SGLE+GNFP EVSS
Sbjct: 185 RRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSS 244

Query: 182 TAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPNSASP 241
           +AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               S+S 
Sbjct: 245 SAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSG 304

Query: 242 DGGAL---LITAPTTTMELPPIS--------------AALLDPPPPYPAPLNTYVAAGTQ 264
            GGA    LITA + T+     S              A  +DP   YP P+NT++ AGTQ
Sbjct: 305 GGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFM-AGTQ 364

[Close]

BLAST of CmaCh04G007690 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43
Identity = 129/312 (41.35%), Postives = 156/312 (50.00%), Query Frame = 0


Query: 29  YRNYESLGIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLV 88
           Y N +   IW           QQQQ QQ A         G V SG  S       RS   
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 89  MLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPAS 148
            + S    GG  +      +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+
Sbjct: 105 NVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAA 164

Query: 149 KRRER---------HLRS--DATNLKRPRD--------------------------NTAA 208
           KRRER         H  S  +  N KR R+                          N  +
Sbjct: 165 KRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANS 224

Query: 209 SSGLEMG-NFPMEVSSTAVFRCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPE 264
           +SGLE+  + P EV+S A+FRCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE
Sbjct: 225 NSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of CmaCh04G007690 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 168.3 bits (425), Expect = 8.2e-42
Identity = 107/250 (42.80%), Postives = 136/250 (54.40%), Query Frame = 0


Query: 56  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTW 115
           D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTW
Sbjct: 98  DHEPVRSSTGGFTVTRQGN---MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTW 157

Query: 116 VPASKRRERHLRSDATNLKRPRDN---------------------------------TAA 175
           V A+KRRER  +      KR RD                                   A+
Sbjct: 158 VSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNAS 217

Query: 176 SSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQ 235
           SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP    
Sbjct: 218 SSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH 277

Query: 236 QPPPPPNSASPDGGA-------LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLN 259
                  S+S +G         L+ + P+  TT  +  ++     +DP   Y A   P N
Sbjct: 278 H----RYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFN 337

[Close]

BLAST of CmaCh04G007690 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 168.3 bits (425), Expect = 8.2e-42
Identity = 107/250 (42.80%), Postives = 136/250 (54.40%), Query Frame = 0


Query: 56  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTW 115
           D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTW
Sbjct: 98  DHEPVRSSTGGFTVTRQGN---MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTW 157

Query: 116 VPASKRRERHLRSDATNLKRPRDN---------------------------------TAA 175
           V A+KRRER  +      KR RD                                   A+
Sbjct: 158 VSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNAS 217

Query: 176 SSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQ 235
           SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP    
Sbjct: 218 SSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH 277

Query: 236 QPPPPPNSASPDGGA-------LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLN 259
                  S+S +G         L+ + P+  TT  +  ++     +DP   Y A   P N
Sbjct: 278 H----RYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFN 337

The following BLAST results are available for this feature:

BLAST of CmaCh04G007690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGX0	1.4e-49	40.24	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	5.1e-49	38.98	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9SD40	1.5e-48	48.99	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9LQZ5	1.6e-42	41.35	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9FXH7	1.1e-40	42.80	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of CmaCh04G007690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J480	5.7e-152	100.00	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 ...	[more]
A0A6J1FUH1	9.5e-147	97.37	protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3...	[more]
A0A0A0KUG2	6.2e-98	66.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1	[more]
A0A5A7TNR6	4.0e-97	66.67	Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CNX3	4.0e-97	66.67	protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3...	[more]

BLAST of CmaCh04G007690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982329.1	1.2e-151	100.00	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein S...	[more]
XP_022942307.1	2.0e-146	97.37	protein SHORT INTERNODES-like [Cucurbita moschata] >XP_022942308.1 protein SHORT...	[more]
XP_023552309.1	1.3e-145	95.90	protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7031235.1	1.7e-145	96.25	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552316.1	5.9e-143	95.15	protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G007690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66350.1	9.6e-51	40.24	Lateral root primordium (LRP) protein-related	[more]
AT3G51060.1	1.1e-49	48.99	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	1.1e-43	41.35	SHI-related sequence 5	[more]
AT1G19790.1	8.2e-42	42.80	SHI-related sequence 7	[more]
AT1G19790.2	8.2e-42	42.80	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 79..121 e-value: 3.8E-28 score: 95.2
None	No IPR available	PFAM	PF05142	DUF702	coord: 78..199 e-value: 3.5E-52 score: 176.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..218
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..259
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 151..198 e-value: 1.9E-23 score: 80.1
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G007690.1	CmaCh04G007690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding