CmaCh04G007290 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G007290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	40S ribosomal protein S10-1-like
Location	Cma_Chr04: 3706537 .. 3708644 (+)
RNA-Seq Expression	CmaCh04G007290
Synteny	CmaCh04G007290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTCTCATTCTTCTCAATCTTCACGCCTCTCGCTTCTACTACTGCCGTTTCAGTTCTTTCTGAACTTCAACCATGGTATTTCTCTTCTTCTTCTTTCATAGCGACTGATTTATGTCCTTTTTTTTTTTTTTTTTCTTCTTATTCTCGTTCCAAGGTTGTGTGGTGTTTTAAAATGAATTGATTTTTGAAAGGAATCAATCTGGCAGTGGGAATTGTTTCCCTGTTTGTGTATTTTGAATTGATGTAGTGGGTTGAGTTCTCTTTCGTTCGAAGAATTATTTTCCTCGTGTTCAGTCTCTCATGTTCATTTGTTTCTTTTCTTCAGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTACCTCTTTCAAGGTACACTTTAATTCAATCCCTCTTAGACGAGGGTTATTTCTGATTTGACGATGATTTCGCGATTTTATTTATTCGTTGTTGTTGGCGATTCAGAGGGGGTTTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCCAATTTGCAGGTTATTAAGCTAATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTTACCAATGATGGCATTGAGTTCCTCAGGACTTACCTCAACCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCCAAGCCTGCTGGCAGGCCCTTTGGCGGACCACCCGGGGATCGCCCACGGTAAGATATGTCTGTAATGCTGATCAATTCATTAAGGTTATGGTTGATTTATTTGTGCTTTGGAACTATGGATTATGAAGTTTTTTCGTTACTGTTCTAGGTTTATAGATGGAGGTGTATGTAATATGTGATTGTATAATGCGAGGGCTATGTTATTTAGTAAGTTGTATTTACCCATATTAGTATTCTGATTGAGTTTTGGTGATTATATGAATTAGGGGTCCACCTCGTTTTGAGGGAGGTGAGAGGAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGCTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCAGCAGATTACAGGCCTTCTTTTGGGGTAATCTTTGAATCATCCATTTTGCATCATCATAGTGCTATACATAATATGGTTGATGCTCTCTATATAAGAATGTTGCTATTTCCTTGTTTTGATCTGCCCTTGGGATGATTCTTTATGATAGATATAAAATGCATTACAATCATTGTTCATGTATCTAGCAAGAATTTTTGTAAGTGAGCCCTGCGCACCAGGGGTCAAGAGTTGATGGGAAGCATCATATTGTAATAGTTTAGTTCCTTCATCTGTTCATGTTTTCCTTCATAAGTGCTCCCTACTCAGTTAGTTTGCTCTGCTAATAACTCAGATTATGATGTTAATTCATAGCTTCTTGTGGCATTTGCATGTCATGGTCTTTGTTAATAAAATATTCTTGGGCTCATCTGAAAAAGATTAATGATTTCAATGTGGGGTTTACCTGTGTTGATTAGGCATATTCAAAGAATTGGGGGCTTGTGGCTACTCTGTTTCATCAAAGAATGAGAGTTAATAGAAAAATTATTAGCTGAAATGTTAGAGATGTCATTGGATAGGTGCAGAAGTTATATTTTGAACGACTTGGCAACTCTATGAGAGTCGTTTGTGAGTTCTTCGATGGTTTCGTTGATTGTTGTCTTATACTTAAAAATTTATCAGGGTCCTGGTGGAAGACCGGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGGAGCAAGCTCAAATCTTCCTTGAAAAATATGGTCTTACGAGCAGTTTAATGAATTTTCAGTGGAATGAGCTAGCAGTTTGATTAAGTTTTCCTTTCATTTAGCATATGGGGATCTTACAAATTTAAATTTTGTTCCTCTCTTTGAACGGTTAATTACTATTTGTTTGGTATGAGCAAGAATGTGATTTTATTGTCTTGAAGATCGACTGCCTTGGTAATGAGGAAACAAACATCTTAAGCAACTTATTATATTTACGATATAATTGTTTTCTGTATGTAATTTTATTCCTTGTTTTGATTTATCTGCAAC

mRNA sequence

ATTCTTCTCATTCTTCTCAATCTTCACGCCTCTCGCTTCTACTACTGCCGTTTCAGTTCTTTCTGAACTTCAACCATGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTACCTCTTTCAAGAGGGGGTTTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCCAATTTGCAGGTTATTAAGCTAATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTTACCAATGATGGCATTGAGTTCCTCAGGACTTACCTCAACCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCCAAGCCTGCTGGCAGGCCCTTTGGCGGACCACCCGGGGATCGCCCACGGGGTCCACCTCGTTTTGAGGGAGGTGAGAGGAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGCTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCAGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGGAGCAAGCTCAAATCTTCCTTGAAAAATATGGTCTTACGAGCAGTTTAATGAATTTTCAGTGGAATGAGCTAGCAGTTTGATTAAGTTTTCCTTTCATTTAGCATATGGGGATCTTACAAATTTAAATTTTGTTCCTCTCTTTGAACGGTTAATTACTATTTGTTTGGTATGAGCAAGAATGTGATTTTATTGTCTTGAAGATCGACTGCCTTGGTAATGAGGAAACAAACATCTTAAGCAACTTATTATATTTACGATATAATTGTTTTCTGTATGTAATTTTATTCCTTGTTTTGATTTATCTGCAAC

Coding sequence (CDS)

ATGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTACCTCTTTCAAGAGGGGGTTTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCCAATTTGCAGGTTATTAAGCTAATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTTACCAATGATGGCATTGAGTTCCTCAGGACTTACCTCAACCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCCAAGCCTGCTGGCAGGCCCTTTGGCGGACCACCCGGGGATCGCCCACGGGGTCCACCTCGTTTTGAGGGAGGTGAGAGGAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGCTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCAGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGGAGCAAGCTCAAATCTTCCTTGA

Protein sequence

MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSNLP

Homology

[Close]

BLAST of CmaCh04G007290 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.9e-74
Identity = 146/181 (80.66%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G  G GAG +S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGG-GFGAGPTS 180

[Close]

BLAST of CmaCh04G007290 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.9e-74
Identity = 146/181 (80.66%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G  G GAG +S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGG-GFGAGPTS 180

[Close]

BLAST of CmaCh04G007290 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-74
Identity = 143/182 (78.57%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S 
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 177

Query: 181 LP 183
            P
Sbjct: 181 FP 177

[Close]

BLAST of CmaCh04G007290 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-72
Identity = 146/183 (79.78%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASS 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 179

Query: 181 NLP 183
            LP
Sbjct: 181 GLP 179

[Close]

BLAST of CmaCh04G007290 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.5e-68
Identity = 147/185 (79.46%), Postives = 161/185 (87.03%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAGA 180
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGA A
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGA-A 180

Query: 181 SSNLP 183
            S+LP
Sbjct: 181 GSDLP 180

[Close]

BLAST of CmaCh04G007290 vs. ExPASy TrEMBL
Match: A0A6J1J0T0 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.6e-97
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA ASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. ExPASy TrEMBL
Match: A0A6J1FX77 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111447842 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GAGAS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180

Query: 181 SNLP 183
           SNLP
Sbjct: 181 SNLP 184

[Close]

BLAST of CmaCh04G007290 vs. ExPASy TrEMBL
Match: A0A6J1EYG0 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG  ASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGGAASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. ExPASy TrEMBL
Match: A0A0A0KUQ3 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA  SSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. NCBI nr
Match: XP_022982956.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023528948.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.0 bits (933), Expect = 7.5e-97
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. NCBI nr
Match: XP_022985005.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosomal protein S10-1-like [Cucurbita maxima])

HSP 1 Score: 361.7 bits (927), Expect = 3.7e-96
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA ASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. NCBI nr
Match: XP_023553253.1 (40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >KAG6577181.1 40S ribosomal protein S10-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015178.1 40S ribosomal protein S10-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA ASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. NCBI nr
Match: XP_022942965.1 (40S ribosomal protein S10-1-like [Cucurbita moschata] >KAG6600554.1 40S ribosomal protein S10-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031193.1 40S ribosomal protein S10-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GAGAS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180

Query: 181 SNLP 183
           SNLP
Sbjct: 181 SNLP 184

[Close]

BLAST of CmaCh04G007290 vs. NCBI nr
Match: XP_022931372.1 (40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S ribosomal protein S10-1-like [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 3.2e-95
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG  ASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGGAASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of CmaCh04G007290 vs. TAIR 10
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-75
Identity = 143/182 (78.57%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S 
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 177

Query: 181 LP 183
            P
Sbjct: 181 FP 177

[Close]

BLAST of CmaCh04G007290 vs. TAIR 10
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-73
Identity = 146/183 (79.78%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASS 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 179

Query: 181 NLP 183
            LP
Sbjct: 181 GLP 179

[Close]

BLAST of CmaCh04G007290 vs. TAIR 10
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 258.8 bits (660), Expect = 3.2e-69
Identity = 147/185 (79.46%), Postives = 161/185 (87.03%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAGA 180
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGA A
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGA-A 180

Query: 181 SSNLP 183
            S+LP
Sbjct: 181 GSDLP 180

[Close]

BLAST of CmaCh04G007290 vs. TAIR 10
Match: AT4G25740.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 224.6 bits (571), Expect = 6.6e-59
Identity = 120/182 (65.93%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP G             
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRG------------- 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180
                               G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S 
Sbjct: 121 --------------------GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 149

Query: 181 LP 183
            P
Sbjct: 181 FP 149

[Close]

BLAST of CmaCh04G007290 vs. TAIR 10
Match: AT5G41520.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 111/139 (79.86%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 46  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGP 105
           MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG 
Sbjct: 1   MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 60

Query: 106 PGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPG 165
            GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R G
Sbjct: 61  GGDRPRGPPRGD-GERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQG 120

Query: 166 FGRGAGSYGGGAGASSNLP 183
           FGRGAG +GGGA A S+LP
Sbjct: 121 FGRGAGGFGGGA-AGSDLP 134

The following BLAST results are available for this feature:

BLAST of CmaCh04G007290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DKK8	1.9e-74	80.66	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	1.9e-74	80.66	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9SW09	2.4e-74	78.57	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
Q9LTF2	1.8e-72	79.78	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9FFS8	4.5e-68	79.46	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of CmaCh04G007290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J0T0	3.6e-97	100.00	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=...	[more]
A0A6J1JA51	1.8e-96	99.45	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=...	[more]
A0A6J1FX77	1.2e-95	98.91	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111447842 P...	[more]
A0A6J1EYG0	1.5e-95	98.35	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 P...	[more]
A0A0A0KUQ3	2.0e-95	98.35	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090...	[more]

BLAST of CmaCh04G007290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982956.1	7.5e-97	100.00	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosoma...	[more]
XP_022985005.1	3.7e-96	99.45	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosoma...	[more]
XP_023553253.1	1.1e-95	98.90	40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40...	[more]
XP_022942965.1	2.4e-95	98.91	40S ribosomal protein S10-1-like [Cucurbita moschata] >KAG6600554.1 40S ribosoma...	[more]
XP_022931372.1	3.2e-95	98.35	40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S riboso...	[more]

BLAST of CmaCh04G007290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25740.1	1.7e-75	78.57	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G52650.1	1.2e-73	79.78	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.1	3.2e-69	79.46	RNA binding Plectin/S10 domain-containing protein	[more]
AT4G25740.2	6.6e-59	65.93	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.2	3.7e-49	79.86	RNA binding Plectin/S10 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..104 e-value: 2.2E-47 score: 161.2
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 3..94 e-value: 1.1E-42 score: 144.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..129
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 1..182
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G007290.1	CmaCh04G007290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome