CmaCh04G006780 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G006780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein SKIP8-like
Location	Cma_Chr04: 3456198 .. 3459325 (-)
RNA-Seq Expression	CmaCh04G006780
Synteny	CmaCh04G006780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTGCCGCTGCTGCCACCATTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCCTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTTGGACCCCAGGGCTGAGGTAACTTCTTCGACCTGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAGACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTACCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCGCAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGTATAGGTTAGGTTTATTCTTCTTTTGTATGGTTTTCGTCTGAACTGCTGGAGTTGCGGTAATTTTTTTTTTCCTTCTGGAACCGAGGTAGAAACACGACGGGATTTCAGAATTGTGTACTTGGCAATTTGTTAAGAACTCTTGTTACCATCGTCTCGTCTACATTCATTCAATTACTTCAGCGTCTTCTAGTAATTCTGGGGGGAAACGAATTGGCTGTATTTTTATCATCGTTCCAGTTTATGGCTTGTGATCACAGTTCTTGGATTGACAGGAGCTACCTCTGTTCTTTGTTTGTGTACTGTTCTGGATGCTTAAATCTATTTCTCTGGGGCTAAAAGAACTTTTTCCATTAAATCTTCTAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAACAAGAACAATTATGAACATCAATGCCCAATTCTGTAGCATCATCAGAGAGAGGTCCCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTACTTTCCTCATTGTCTCTCTCTCTCTATATAAATTTTGCTATATTTTTTGCCATGAAATCTGACAACACGTCTGACATTTGTTTATTTCAAGACTTGGGAGCTCGCATATATGACCCCTTTTTGTTGTCTCACTCGTCAGATCTTTACATATTTTAAGCATTTTTTTATTAAGAAGAAGGTGATATACAAGGGATTATCAGAAATGACATGAGCCAAATTTGGGTGCTAATGGCTATCTGATTACTGTCATGAGCCAAATTTTTGAAAAATCAAAAAATAGTTTTTAAAAACTTGTTTTGCCTTTTATAATTTTGGCTAAGAATTCAAACATTTTTTTTTTTTTAAGAAATGTGAAAACCATAGTAAAGAAATTGCAAGGGAACAAACAAAATTTTCAAAAACAGAAATCTAAAATTAAAATTGTTATTAAATGGCCAAGTTTTTAGTAGTTTTGTTCTATAGAGCATTTGAGGACAATAATTTATTATCAATGTTGAGGCCGGCAATAGACCTTAACCTCGTGTCTCATTGTCACTTGATAAAGCAATTTTATGAGACTTCGGATAAAGGGCCAATATGTGCGTAGGTTGCCTCAACTATTTGTGGTAGACCGGTGCTGCATTATGGGCTTTGTTCTTTTTGAATCTTGCTGTATCTAAATGTTTCTTGTGGGAAAGATTTTGCCATGTGCATGGTTAACTACATTACATGATTAATGCTGCGTTTATTTACTTGGCCTTCTAGGACAAAAGCAAATGTGTTACGTTAGTGTGAAGCTATGAGGAATAAGGATGTAGAATATATCCATTAATTTGTATTAATCTTCTAACTTCAACTTAGACTAGATGATATATTATTATACATTGACTTGCATAAACTTCGGCATGTCAATTGGTAGACCTGTTGACATGGGTTAACCCCACATCAATTTCATAACGCAGCTTCAGCACAAGGAACTGATAAGGTGGAACTTTCCTGATAATTTCGCAAGTAACCTTTGCGATCAACAAAGACACACTAATTTTAGGGGTGAACTATGTTGAAGGGATTGATTATTGAACCTGTCACGTTGCTATGTCTAGATGGTATGATATAAACAATTTATTGTGAAAGGCTATGTATGTATGTTATTTTATGCAATTACTCTATGAATTCCTATTATATGTTGAGTTAAAGCTTTCAAATAAATTCATATAATCTAGTACTTAACATGTTGGGGTTTTCCTTTTAACAGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAAGAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGTCCTAACAGACATGGCTTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGCATCATCACAGCTCAGTGATGCTTATTGTTGGGGATGTGGAAGAACAAATGGTTCATGGGTAACAGAGCAAAGATAGAAGAGAAGAAAACCATGAAAATATAGAATTACTAGGTCAAAGATAGGTGATGTCTGGTAGCAGAAGCAAGATTACTTCTTAACAGCACCACCAGAATCAACTGTTCGAACCTCAGTTTTGCTTGAGCTATGTTGATTGCTGCGCCCTTTTTCTTTCAATGTTCTGGTCCCTAATTCTTTTGTTGGTTCAGAGGTTTCAGGAATGGAATTCAATCCTGGGAATGAGGTATATGATGAGTTTTAGAAGTATTTTTGGTTGGTTTGGTTCATGCTCAAATGGCTGCTGCATGTGTTTAAACCAATGAAGGATCATCCCCATTATCTGTACTTTAATTTCTTGATCGATTGACTGCTACACTTCGACAGGTAGATGACTTGTTCAATAACTTATGTGTAAAGAAGAAAGGATAAGCAACTTTGGATGAGACTCTATTGCAAATGTGTAAGATTTTCTATTCAGAAACGCCCAATGTTAAAGCATGATGGGGGGTAATGCCTGTTGGTTAAATGGGGTTTTGCATCAAATCTACTTTTTTTTTGGTTAAATTAGAAATGCCCCCTATGTTTCGAT

mRNA sequence

ATGGAGATTGCCGCTGCTGCCACCATTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCCTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTTGGACCCCAGGGCTGAGGTAACTTCTTCGACCTGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAGACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTACCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCGCAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAACAAGAACAATTATGAACATCAATGCCCAATTCTGTAGCATCATCAGAGAGAGGTCCCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAAGAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGTCCTAACAGACATGGCTTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGCATCATCACAGCTCAGTGATGCTTATTGTTGGGGATGTGGAAGAACAAATGGTTCATGGGTAACAGAGCAAAGATAGAAGAGAAGAAAACCATGAAAATATAGAATTACTAGGTCAAAGATAGGTGATGTCTGGTAGCAGAAGCAAGATTACTTCTTAACAGCACCACCAGAATCAACTGTTCGAACCTCAGTTTTGCTTGAGCTATGTTGATTGCTGCGCCCTTTTTCTTTCAATGTTCTGGTCCCTAATTCTTTTGTTGGTTCAGAGGTTTCAGGAATGGAATTCAATCCTGGGAATGAGGTATATGATGAGTTTTAGAAGTATTTTTGGTTGGTTTGGTTCATGCTCAAATGGCTGCTGCATGTGTTTAAACCAATGAAGGATCATCCCCATTATCTGTACTTTAATTTCTTGATCGATTGACTGCTACACTTCGACAGGTAGATGACTTGTTCAATAACTTATGTGTAAAGAAGAAAGGATAAGCAACTTTGGATGAGACTCTATTGCAAATGTGTAAGATTTTCTATTCAGAAACGCCCAATGTTAAAGCATGATGGGGGGTAATGCCTGTTGGTTAAATGGGGTTTTGCATCAAATCTACTTTTTTTTTGGTTAAATTAGAAATGCCCCCTATGTTTCGAT

Coding sequence (CDS)

ATGGAGATTGCCGCTGCTGCCACCATTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCCTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTTGGACCCCAGGGCTGAGGTAACTTCTTCGACCTGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAGACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTACCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCGCAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAACAAGAACAATTATGAACATCAATGCCCAATTCTGTAGCATCATCAGAGAGAGGTCCCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAAGAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGTCCTAACAGACATGGCTTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGCATCATCACAGCTCAGTGATGCTTATTGTTGGGGATGTGGAAGAACAAATGGTTCATGGGTAA

Protein sequence

MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVMLIVGDVEEQMVHG

Homology

[Close]

BLAST of CmaCh04G006780 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.0e-91
Identity = 153/211 (72.51%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 102 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 161
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 162 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHA 221
           KDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 222 SGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 281
           SGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 282 VYEYHNGRWYMVHHHSSVMLIVGDVEEQMVH 313
           V+E+HNGRW+MVHHHSSVMLI  D ++ +VH
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI--DDQQVVVH 231

[Close]

BLAST of CmaCh04G006780 vs. ExPASy Swiss-Prot
Match: Q9T0B0 (Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-34
Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 115 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPI 174
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++F+ E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 175 NGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGY 230
           NGWKA++A T+ +M +N +F SI+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

[Close]

BLAST of CmaCh04G006780 vs. ExPASy TrEMBL
Match: A0A6J1J3L2 (F-box protein SKIP8-like OS=Cucurbita maxima OX=3661 GN=LOC111480964 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.5e-178
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN
Sbjct: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVGDVEEQMVHG
Sbjct: 301 LIVGDVEEQMVHG 313

[Close]

BLAST of CmaCh04G006780 vs. ExPASy TrEMBL
Match: A0A6J1FVP4 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111447294 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174
Identity = 304/313 (97.12%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEIA+A T+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCN
Sbjct: 1   MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFC+IIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG+VEEQM HG
Sbjct: 301 LIVGEVEEQMAHG 313

[Close]

BLAST of CmaCh04G006780 vs. ExPASy TrEMBL
Match: A0A6J1EUJ3 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 5.9e-164
Identity = 286/313 (91.37%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEIA+AATIAL SQPFPIAAIVTFLCFLLALFAAVRLVSVP+IRRTK +Q EG+GTRN N
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGV IGGL+PRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDF+LEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQF +IIR+RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG++E+QMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of CmaCh04G006780 vs. ExPASy TrEMBL
Match: A0A0A0KX34 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.0e-163
Identity = 283/313 (90.42%), Postives = 302/313 (96.49%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEI ++ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVP+IRRTK LQSE +GTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVI GLDPRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQF +IIR+RSLQAMS FWLNADYVKCIHASGEFFSGYNAV+QSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG++E+QMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of CmaCh04G006780 vs. ExPASy TrEMBL
Match: A0A5A7TU63 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003610 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 6.6e-163
Identity = 283/313 (90.42%), Postives = 303/313 (96.81%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEI ++ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVP+IRRTK+LQSE +GTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVI GLDPRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQF +IIR+RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+H+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG++E+QMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of CmaCh04G006780 vs. NCBI nr
Match: XP_022981983.1 (F-box protein SKIP8-like [Cucurbita maxima])

HSP 1 Score: 635.2 bits (1637), Expect = 3.0e-178
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN
Sbjct: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVGDVEEQMVHG
Sbjct: 301 LIVGDVEEQMVHG 313

[Close]

BLAST of CmaCh04G006780 vs. NCBI nr
Match: XP_022942140.1 (F-box protein SKIP8-like [Cucurbita moschata])

HSP 1 Score: 620.9 bits (1600), Expect = 5.9e-174
Identity = 304/313 (97.12%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEIA+A T+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCN
Sbjct: 1   MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFC+IIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG+VEEQM HG
Sbjct: 301 LIVGEVEEQMAHG 313

[Close]

BLAST of CmaCh04G006780 vs. NCBI nr
Match: KAG7031147.1 (F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 617.1 bits (1590), Expect = 8.5e-173
Identity = 302/313 (96.49%), Postives = 309/313 (98.72%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEIA+AAT+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCN
Sbjct: 1   MEIASAATVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKVPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFC+IIRERSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHPSGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG+VEEQM HG
Sbjct: 301 LIVGEVEEQMAHG 313

[Close]

BLAST of CmaCh04G006780 vs. NCBI nr
Match: KAG6600509.1 (F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 615.5 bits (1586), Expect = 2.5e-172
Identity = 301/313 (96.17%), Postives = 308/313 (98.40%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEIA+AAT+ALWSQPFPIAAIVTFLCFLLALF AVRLVSVPFIRRTKALQSEG+GTRNCN
Sbjct: 1   MEIASAATVALWSQPFPIAAIVTFLCFLLALFVAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKVPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFC+IIRERSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHPSGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG+VEEQM HG
Sbjct: 301 LIVGEVEEQMAHG 313

[Close]

BLAST of CmaCh04G006780 vs. NCBI nr
Match: XP_038880969.1 (F-box protein SKIP8-like [Benincasa hispida])

HSP 1 Score: 589.7 bits (1519), Expect = 1.5e-164
Identity = 288/313 (92.01%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60
           MEI ++ATIAL SQPFPIAAIVTFLCFLLALFAAVRLVSVP+IRRTKALQS  LGTRNCN
Sbjct: 1   MEIISSATIALSSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKALQSVALGTRNCN 60

Query: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120
           CTCSLNGGVVIGGLDPRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQF +IIR+RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQ+AF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQLAF 240

Query: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGDVEEQMVHG 314
           LIVG++E+QMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of CmaCh04G006780 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 335.9 bits (860), Expect = 3.5e-92
Identity = 153/211 (72.51%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 102 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 161
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 162 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHA 221
           KDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 222 SGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 281
           SGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 282 VYEYHNGRWYMVHHHSSVMLIVGDVEEQMVH 313
           V+E+HNGRW+MVHHHSSVMLI  D ++ +VH
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI--DDQQVVVH 231

[Close]

BLAST of CmaCh04G006780 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 335.9 bits (860), Expect = 3.5e-92
Identity = 153/211 (72.51%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 102 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 161
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 162 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHA 221
           KDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 222 SGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 281
           SGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 282 VYEYHNGRWYMVHHHSSVMLIVGDVEEQMVH 313
           V+E+HNGRW+MVHHHSSVMLI  D ++ +VH
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI--DDQQVVVH 231

[Close]

BLAST of CmaCh04G006780 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 335.9 bits (860), Expect = 3.5e-92
Identity = 153/211 (72.51%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 102 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 161
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 162 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHA 221
           KDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 222 SGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 281
           SGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 282 VYEYHNGRWYMVHHHSSVMLIVGDVEEQMVH 313
           V+E+HNGRW+MVHHHSSVMLI  D ++ +VH
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI--DDQQVVVH 231

[Close]

BLAST of CmaCh04G006780 vs. TAIR 10
Match: AT4G23960.1 (F-box family protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-35
Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 115 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPI 174
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++F+ E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 175 NGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGY 230
           NGWKA++A T+ +M +N +F SI+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

The following BLAST results are available for this feature:

BLAST of CmaCh04G006780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YV9	5.0e-91	72.51	F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1	[more]
Q9T0B0	1.9e-34	57.39	Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE...	[more]

BLAST of CmaCh04G006780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J3L2	1.5e-178	100.00	F-box protein SKIP8-like OS=Cucurbita maxima OX=3661 GN=LOC111480964 PE=4 SV=1	[more]
A0A6J1FVP4	2.8e-174	97.12	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111447294 PE=4 SV=1	[more]
A0A6J1EUJ3	5.9e-164	91.37	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1	[more]
A0A0A0KX34	3.0e-163	90.42	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 ...	[more]
A0A5A7TU63	6.6e-163	90.42	F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]

BLAST of CmaCh04G006780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981983.1	3.0e-178	100.00	F-box protein SKIP8-like [Cucurbita maxima]	[more]
XP_022942140.1	5.9e-174	97.12	F-box protein SKIP8-like [Cucurbita moschata]	[more]
KAG7031147.1	8.5e-173	96.49	F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600509.1	2.5e-172	96.17	F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038880969.1	1.5e-164	92.01	F-box protein SKIP8-like [Benincasa hispida]	[more]

BLAST of CmaCh04G006780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10925.1	3.5e-92	72.51	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.2	3.5e-92	72.51	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.3	3.5e-92	72.51	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G23960.1	1.4e-35	57.39	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 178..309 e-value: 2.5E-31 score: 110.5
None	No IPR available	GENE3D	1.20.1280.50		coord: 102..157 e-value: 1.5E-6 score: 29.8
IPR037401	SnoaL-like domain	PFAM	PF13474	SnoaL_3	coord: 187..300 e-value: 9.9E-27 score: 93.7
IPR044260	F-box protein SKIP8-like	PANTHER	PTHR47124	F-BOX PROTEIN SKIP8	coord: 11..313
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 113..159 score: 8.59666
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 112..294
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 182..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G006780.1	CmaCh04G006780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding