CmaCh04G005730 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G005730
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ubiquitin-conjugating enzyme E2 36
Location	Cma_Chr04: 2920426 .. 2923112 (+)
RNA-Seq Expression	CmaCh04G005730
Synteny	CmaCh04G005730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATTGGGACAGAAAGATCGTAATAATTGGAGTGTGCAGAAAGTTGTACCTTCAAACTTCGTTCAAGTATTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCAATCTCTCTCTTCTTCGTTTCCTAAACCCTATCCCAAGCTCTGCAATCCGACCTCAAATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGTAAGATCTTTGATCTTCTTCGCGATCTTCCTTGTTTTCCACCCCGATCGGTTTGTCTGGCTTGATTTATTCGTTTGTTGGGGAAATGGTCTCGTTTTGTTGGGTTGAAGTTTTCTTTGTGGGATTTCGATGAATTTTGTATGTATTTTGTTAGTAGAACTGGGTTATTGATTGATTTGTTCCTACTTTGTGATCAATCGCAGGAAACTCAGCGTCTCCTCAGTGAGCCTGGTGAGTTTTTGATTATTTTAAAGGGTTTGAGTTATTTGATTCCTGATCTTGTTACTTGGAATTGTTTGTTTTTTGGGTATTGGGTGTGGATAGGTTTTATGGTGTGGATTTATTCATCAGATAATTATGAAGTTGAAGTTCATTTTGATTTATTTGATCTTGATCTCTGATAATGTGATTTTAGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGTAAATTACTTGACAGTACGTTATGGTTGTGGGAACGTCAAATTATTTTGAAAATTTTGCTATTCCTTTGTTGGTAATATGGATGGTTATAGAACCAACTACGTATTCAAGTGAAGATTGGCTAAAGTGTTACTGATATTGATATGTTTACTCCTATGAAAATGGCATGTCGTTATCAGTGAAGATCAACTGTGGGAACATCTTTTACTCATAAAGACCTCAATTTTGTTTAGTTAAGTATTTTACTCATGTCGTTTGTGCTTGAACATTTCCTTTATGCCCCATGATGCAACAGTAGAATACTACTGTTCTGAGCTGCAAAGCTTGAGAACATGCTGGTTATCATGCCACGATTTTTATTCAATAATGTTAATGTATTCCTTCAATCTGAGTTCCTTTTCTTCTTATCCTTGGTCACATTTAATGTTGTTAATCTGTTTCTATATTGTTCTTCGCATATACTTGTGCTGAATTCAATGTACTTTACAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTAATTTGCAATTCATCATTCCTGGGATATCTTCCCGCACTTATTCGACAAATCCTACTTGCATTTCTTCCACTGTTATTCTTTTCAAATAATTAGACATGTTTACCTTTTGTTTTGCGTTACATTAAAAGAAAAAAATTATTAGCAAATGCATCCAATAAAAATCATAGGGCTAATGGGTGATCACCAAATATTGTTGGATCATTTGAAAACTTCTTATGCCAAATGTGCTGTTAAATTTTCATATAATTATTGAGCTACTTATGTTTTCTTGTCCTTACTTCTTGATTGTGATTTCATTTATGGATCATGAGATTGTTAAAACTTCGTTTGATATTGGATTTTCCATAATTACTATTCTTCTTGTCGAATTCGCATCTTCCCCCCTCTGTTAAGGTTTTCCTATCTTGCACTGAACATATAACAAAAATTCCAAGTCATCATAATTTATTTTGCATACACGTAGTTTTTAATGTTTCACGAATCTTGACATTTACGTCTATAATACAACTTAATTCTGTTTGATCTATGGAACACGTGGGAATAAATTTATATTGCTATTACATGAAGAAGTTTTTGGTATTTGAGATCGTCATGGTTGGAGATGGGAGGATAGTTTTTTTTTTTTATGACCTGCTTCATCAGCCGATTGGTTTGAAAGACTGAGAAGGGAAACATGTTTGGCTGATTTTTTAAAATATAAATTTGATCCACATAGAAAAGAGACGTATCCAAAGGAGAAATTTTTAATCAAAATTGAACAATCTTATTTAAGGGTTGTCCAATAACTGCAGATTCTGTATCTAGGTACACTAGGTAATCCTATTGGAACATATTTTAACCTGTTTTGAGTTCCTCCACCGCCACCTTTTCCCTTTTCCCTTTTCCATTTTCTCACATTTTTTTTTTGTGGAAACAGGTTCGATTTCTGACGAAGATTTATCATCCAAATATTGATAAGGTAAGTGTCTACTTGCGTAGTTCTTATTGCCATCCTCACCAACATTCTGCAGTTGGTTGCTGATGGCGTGAATTTCTGCAATTAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGGTATATTAATGTTTAATGCAATTTTCCAGTGCATCCGCATATTAGCTTTGAACATATTGCATGGTCTTTCACTCATTTAATTCACTCTAGGGATACAGATCTGAAAATTTGACCACCGTGTAATTTATGATAAATTTAACTATATCACTTTGGTTTATATATCACAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAATGAGGCAGAGGCTGTTGAAACAGGTGAGTTGGTCTACTTTATTGCTTTTGTTGAGCTTTTCTTTTTCAATGAGTAG

mRNA sequence

CTTATTGGGACAGAAAGATCGTAATAATTGGAGTGTGCAGAAAGTTGTACCTTCAAACTTCGTTCAAGTATTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCAATCTCTCTCTTCTTCGTTTCCTAAACCCTATCCCAAGCTCTGCAATCCGACCTCAAATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGAAACTCAGCGTCTCCTCAGTGAGCCTGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTGACGAAGATTTATCATCCAAATATTGATAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAATGAGGCAGAGGCTGTTGAAACAGGTGAGTTGGTCTACTTTATTGCTTTTGTTGAGCTTTTCTTTTTCAATGAGTAG

Coding sequence (CDS)

ATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGAAACTCAGCGTCTCCTCAGTGAGCCTGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTGACGAAGATTTATCATCCAAATATTGATAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAATGAGGCAGAGGCTGTTGAAACAGGTGAGTTGGTCTACTTTATTGCTTTTGTTGAGCTTTTCTTTTTCAATGAGTAG

Protein sequence

MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGELVYFIAFVELFFFNE

Homology

[Close]

BLAST of CmaCh04G005730 vs. ExPASy Swiss-Prot
Match: Q94A97 (Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana OX=3702 GN=UBC35 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.3e-76
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWK+NEAEAV+T +
Sbjct: 121 DPLSENIAKHWKSNEAEAVDTAK 143

[Close]

BLAST of CmaCh04G005730 vs. ExPASy Swiss-Prot
Match: Q9FZ48 (Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana OX=3702 GN=UBC36 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.0e-76
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWK+NEAEAVET +
Sbjct: 121 DPLSENIAKHWKSNEAEAVETAK 143

[Close]

BLAST of CmaCh04G005730 vs. ExPASy Swiss-Prot
Match: Q0P5K3 (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus OX=9913 GN=UBE2N PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.9e-63
Identity = 112/138 (81.16%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVET 142
           + ++A+ WKTNEA+A+ET
Sbjct: 122 ANDVAEQWKTNEAQAIET 139

[Close]

BLAST of CmaCh04G005730 vs. ExPASy Swiss-Prot
Match: P61088 (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens OX=9606 GN=UBE2N PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.9e-63
Identity = 112/138 (81.16%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVET 142
           + ++A+ WKTNEA+A+ET
Sbjct: 122 ANDVAEQWKTNEAQAIET 139

[Close]

BLAST of CmaCh04G005730 vs. ExPASy Swiss-Prot
Match: P61089 (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.9e-63
Identity = 112/138 (81.16%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVET 142
           + ++A+ WKTNEA+A+ET
Sbjct: 122 ANDVAEQWKTNEAQAIET 139

[Close]

BLAST of CmaCh04G005730 vs. ExPASy TrEMBL
Match: A0A2P2LU04 (Putative ubiquitin-conjugating enzyme OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.1e-76
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGELVYFIAFVEL 154
           DPLSENIAKHWKTNE EAVETG  +  + F+++
Sbjct: 121 DPLSENIAKHWKTNEGEAVETGNAIVMLIFIDI 153

[Close]

BLAST of CmaCh04G005730 vs. ExPASy TrEMBL
Match: A0A0D2SFU0 (UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_013G173200 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75
Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGEL 145
           DPLSENIAKHWKTNEAEAVETG++
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGKI 144

[Close]

BLAST of CmaCh04G005730 vs. ExPASy TrEMBL
Match: A0A061F987 (Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_031769 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 111

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 112 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 171

Query: 121 DPLSENIAKHWKTNEAEAVETG 143
           DPLSENIAKHWKTNEAEAVETG
Sbjct: 172 DPLSENIAKHWKTNEAEAVETG 193

[Close]

BLAST of CmaCh04G005730 vs. ExPASy TrEMBL
Match: A0A0D2Q0K6 (UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_002G042900 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGI+ASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGINASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGELVY 147
           DPLSENIAKHWKTNEAEAVETG+ ++
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGKTLW 146

[Close]

BLAST of CmaCh04G005730 vs. ExPASy TrEMBL
Match: A0A2H5QTL9 (UBC core domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_260520 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETG 143
           DPLSENIAKHWKTNEAEAVETG
Sbjct: 121 DPLSENIAKHWKTNEAEAVETG 142

[Close]

BLAST of CmaCh04G005730 vs. NCBI nr
Match: XP_040989168.1 (ubiquitin-conjugating enzyme E2 36 isoform X1 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGELV 146
           DPLSENIAKHWKTNEAEAVETG +V
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGNVV 145

[Close]

BLAST of CmaCh04G005730 vs. NCBI nr
Match: KAF5460920.1 (hypothetical protein F2P56_020755 [Juglans regia])

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGELV 146
           DPLSENIAKHWKTNEAEAVETG +V
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGNVV 145

[Close]

BLAST of CmaCh04G005730 vs. NCBI nr
Match: KJB82042.1 (hypothetical protein B456_013G173200 [Gossypium raimondii])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGEL 145
           DPLSENIAKHWKTNEAEAVETG++
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGKI 144

[Close]

BLAST of CmaCh04G005730 vs. NCBI nr
Match: KAF5460918.1 (hypothetical protein F2P56_020754, partial [Juglans regia])

HSP 1 Score: 291.2 bits (744), Expect = 5.4e-75
Identity = 142/145 (97.93%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 36  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 95

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 96  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 155

Query: 121 DPLSENIAKHWKTNEAEAVETGELV 146
           DPLSENIAKHWKTNEAEAVETG  +
Sbjct: 156 DPLSENIAKHWKTNEAEAVETGSQI 180

[Close]

BLAST of CmaCh04G005730 vs. NCBI nr
Match: EOY13247.1 (Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao])

HSP 1 Score: 290.8 bits (743), Expect = 7.0e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 111

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 112 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 171

Query: 121 DPLSENIAKHWKTNEAEAVETG 143
           DPLSENIAKHWKTNEAEAVETG
Sbjct: 172 DPLSENIAKHWKTNEAEAVETG 193

[Close]

BLAST of CmaCh04G005730 vs. TAIR 10
Match: AT1G78870.2 (ubiquitin-conjugating enzyme 35 )

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-77
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWK+NEAEAV+T +
Sbjct: 121 DPLSENIAKHWKSNEAEAVDTAK 143

[Close]

BLAST of CmaCh04G005730 vs. TAIR 10
Match: AT1G16890.2 (ubiquitin-conjugating enzyme 36 )

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-77
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWK+NEAEAVET +
Sbjct: 121 DPLSENIAKHWKSNEAEAVETAK 143

[Close]

BLAST of CmaCh04G005730 vs. TAIR 10
Match: AT1G78870.1 (ubiquitin-conjugating enzyme 35 )

HSP 1 Score: 281.6 bits (719), Expect = 4.0e-76
Identity = 139/144 (96.53%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELF 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG GVFKLELF
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELF 60

Query: 61  LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 120
           LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP
Sbjct: 61  LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 120

Query: 121 DDPLSENIAKHWKTNEAEAVETGE 144
           DDPLSENIAKHWK+NEAEAV+T +
Sbjct: 121 DDPLSENIAKHWKSNEAEAVDTAK 144

[Close]

BLAST of CmaCh04G005730 vs. TAIR 10
Match: AT1G16890.3 (ubiquitin-conjugating enzyme 36 )

HSP 1 Score: 276.9 bits (707), Expect = 9.8e-75
Identity = 138/152 (90.79%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MANSNLPRRIIKETQRLLSE---------PAPGISASPSEDNMRYFNVMILGPTQSPYEG 60
           MANSNLPRRIIKETQRLLSE         P+PGISASPSE+NMRYFNVMILGPTQSPYEG
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEG 60

Query: 61  GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 120
           GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ
Sbjct: 61  GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 120

Query: 121 ALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 144
           ALLSAPNPDDPLSENIAKHWK+NEAEAVET +
Sbjct: 121 ALLSAPNPDDPLSENIAKHWKSNEAEAVETAK 152

[Close]

BLAST of CmaCh04G005730 vs. TAIR 10
Match: AT1G16890.1 (ubiquitin-conjugating enzyme 36 )

HSP 1 Score: 224.6 bits (571), Expect = 5.8e-59
Identity = 107/110 (97.27%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 34  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 93
           MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL
Sbjct: 1   MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 60

Query: 94  KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 144
           KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAVET +
Sbjct: 61  KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAK 110

The following BLAST results are available for this feature:

BLAST of CmaCh04G005730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A97	2.3e-76	97.20	Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana OX=3702 GN=UBC35 PE=1...	[more]
Q9FZ48	3.0e-76	97.20	Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana OX=3702 GN=UBC36 PE=1...	[more]
Q0P5K3	4.9e-63	81.16	Ubiquitin-conjugating enzyme E2 N OS=Bos taurus OX=9913 GN=UBE2N PE=2 SV=1	[more]
P61088	4.9e-63	81.16	Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens OX=9606 GN=UBE2N PE=1 SV=1	[more]
P61089	4.9e-63	81.16	Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1	[more]

BLAST of CmaCh04G005730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P2LU04	3.1e-76	92.81	Putative ubiquitin-conjugating enzyme OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]
A0A0D2SFU0	1.5e-75	98.61	UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_013G1...	[more]
A0A061F987	3.4e-75	100.00	Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_0317...	[more]
A0A0D2Q0K6	3.4e-75	96.58	UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_002G0...	[more]
A0A2H5QTL9	3.4e-75	100.00	UBC core domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_260520 PE=3...	[more]

BLAST of CmaCh04G005730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_040989168.1	1.9e-75	98.62	ubiquitin-conjugating enzyme E2 36 isoform X1 [Juglans microcarpa x Juglans regi...	[more]
KAF5460920.1	1.9e-75	98.62	hypothetical protein F2P56_020755 [Juglans regia]	[more]
KJB82042.1	3.2e-75	98.61	hypothetical protein B456_013G173200 [Gossypium raimondii]	[more]
KAF5460918.1	5.4e-75	97.93	hypothetical protein F2P56_020754, partial [Juglans regia]	[more]
EOY13247.1	7.0e-75	100.00	Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao]	[more]

BLAST of CmaCh04G005730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78870.2	1.6e-77	97.20	ubiquitin-conjugating enzyme 35	[more]
AT1G16890.2	2.1e-77	97.20	ubiquitin-conjugating enzyme 36	[more]
AT1G78870.1	4.0e-76	96.53	ubiquitin-conjugating enzyme 35	[more]
AT1G16890.3	9.8e-75	90.79	ubiquitin-conjugating enzyme 36	[more]
AT1G16890.1	5.8e-59	97.27	ubiquitin-conjugating enzyme 36	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 8..151 e-value: 5.2E-61 score: 218.7
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 2..139
None	No IPR available	PANTHER	PTHR24068:SF351	UBIQUITIN-CONJUGATING ENZYME E2 35	coord: 2..139
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..146 e-value: 7.6E-62 score: 209.6
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 7..137
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 9..137 e-value: 4.2E-48 score: 162.5
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 5..151 score: 49.983425
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 7..144 e-value: 4.19466E-61 score: 183.558
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 78..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G005730.1	CmaCh04G005730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006301	postreplication repair
biological_process	GO:0070534	protein K63-linked ubiquitination
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity